View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8461_high_5 (Length: 252)

Name: NF8461_high_5
Description: NF8461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8461_high_5
NF8461_high_5
[»] chr3 (7 HSPs)
chr3 (13-252)||(49288477-49288716)
chr3 (45-252)||(49287694-49287892)
chr3 (81-176)||(51421557-51421650)
chr3 (144-235)||(38337410-38337501)
chr3 (162-235)||(38336968-38337041)
chr3 (86-176)||(51420934-51421023)
chr3 (155-241)||(33454884-33454970)
[»] chr7 (2 HSPs)
chr7 (13-241)||(35770292-35770525)
chr7 (45-252)||(35771104-35771300)
[»] chr2 (1 HSPs)
chr2 (45-237)||(4386051-4386234)
[»] chr8 (6 HSPs)
chr8 (81-176)||(37562368-37562461)
chr8 (144-235)||(43924514-43924604)
chr8 (144-235)||(43924951-43925042)
chr8 (144-252)||(43971285-43971393)
chr8 (145-235)||(12349991-12350081)
chr8 (144-232)||(12350587-12350675)
[»] chr1 (6 HSPs)
chr1 (81-176)||(38931387-38931480)
chr1 (144-235)||(14924698-14924789)
chr1 (144-236)||(14925275-14925367)
chr1 (144-235)||(11469105-11469196)
chr1 (86-176)||(38932014-38932103)
chr1 (145-235)||(31788210-31788300)
[»] chr4 (4 HSPs)
chr4 (153-235)||(15481059-15481141)
chr4 (144-235)||(10421514-10421605)
chr4 (155-220)||(43079199-43079264)
chr4 (138-198)||(11029766-11029826)
[»] chr6 (1 HSPs)
chr6 (144-235)||(27763437-27763528)
[»] chr5 (1 HSPs)
chr5 (152-252)||(4554664-4554764)


Alignment Details
Target: chr3 (Bit Score: 208; Significance: 1e-114; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 13 - 252
Target Start/End: Original strand, 49288477 - 49288716
Alignment:
Q  13 cagagagctttagaagaattagaaaagtaacgagagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatg 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49288477 cagagagctttagaagaattagaaaagtaacgagagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatg 49288576  T
Q  113 aaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagc 212  Q
    |||||||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49288577 aaggagagtgatggttgtggaagatagtgataaaaaattccggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagc 49288676  T
Q  213 tttcccatgatgggaaacaactttgcttttctatactaaa 252  Q
    |||| |||| ||||| ||||||||||||| | ||||||||    
T  49288677 tttctcatggtgggagacaactttgctttcccatactaaa 49288716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 45 - 252
Target Start/End: Complemental strand, 49287892 - 49287694
Alignment:
Q  45 agagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgaca 144  Q
    |||||||| |||||||||||||||||||||||||||||||||         |||||||||| | |||||||||||||||||||||||||| |||||||||    
T  49287892 agagttggaaatttaagaaaaatcacgatggttatgatggtg---------atgggttggtagggatgaaggagagtgatggttgtggaagatagtgaca 49287802  T
Q  145 aaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttgcttttct 244  Q
    ||||| | ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||  | |||||||||||| |||| ||    
T  49287801 aaaaaatttggtgttgagagtgtatgataagactatgttctatacttaatctaaccgtttaaattaattttcccatagtaggaaacaactttactttcct 49287702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 176
Target Start/End: Original strand, 51421557 - 51421650
Alignment:
Q  81 atggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataaga 176  Q
    ||||||||| ||||  ||||||||||| |||||||||||| |||||| |||||| |||||||||||||  | | ||||||||||||||||||||||    
T  51421557 atggtgttgctggtggtgggttggtggggatgaaggagagagatggtagtggaagatagtgacaaaaa--tatagtgttgagagtgtatgataaga 51421650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 38337410 - 38337501
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || |||||||| | |||||| | || |||||||||| ||  ||||||||||||||||| |||||||||||||    
T  38337410 aaaaaaatctggtgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaactt 38337501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 162 - 235
Target Start/End: Complemental strand, 38337041 - 38336968
Alignment:
Q  162 gagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||| | |||||| | || |||||||||| ||  ||||||||||||||||| |||||||||||||    
T  38337041 gagtgtctgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaactt 38336968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Complemental strand, 51421023 - 51420934
Alignment:
Q  86 gttgatggttatgggttggtggag-atgaaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataaga 176  Q
    |||| |||||||||||| |||||| ||||| || || |||||| |||||| |||||||||||||  | | ||||||||||||||||| ||||    
T  51421023 gttgctggttatgggtttgtggaggatgaatgaaagagatggtagtggaagatagtgacaaaaa--tatagtgttgagagtgtatgacaaga 51420934  T

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Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 155 - 241
Target Start/End: Complemental strand, 33454970 - 33454884
Alignment:
Q  155 gtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttgcttt 241  Q
    |||||||||||| ||||||| | | |||| | ||||||||||||||||| |||  | ||||| |||| |||||||||| ||| ||||    
T  33454970 gtgttgagagtgcatgataacaatgtgttctttacttaatctaaccgttaaaaaaaactttctcatggtgggaaacaattttccttt 33454884  T

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Target: chr7 (Bit Score: 162; Significance: 1e-86; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 13 - 241
Target Start/End: Complemental strand, 35770525 - 35770292
Alignment:
Q  13 cagagagctttagaagaattagaaaagtaacgagagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatg 112  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  35770525 cagagagctttagaagaattagaaaagtaaggagagttgggaatttaagaaaaatcacgatggttattatggtgttgatggttatgggttggtggggatg 35770426  T
Q  113 aagg-----agagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaa 207  Q
    ||||     |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| || |||| ||||| ||||||||||||    
T  35770425 aaggagaggagagtgatggttgtggaagatagtgacaaaaaattctggtgttgagagtgtatgataagactatattctatatttaatataaccgtttaaa 35770326  T
Q  208 ttagctttcccatgatgggaaacaactttgcttt 241  Q
    ||| |||| ||||| |||||||||| ||| ||||    
T  35770325 ttaactttaccatggtgggaaacaattttacttt 35770292  T

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Target: chr7; HSP #2
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 45 - 252
Target Start/End: Original strand, 35771104 - 35771300
Alignment:
Q  45 agagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgaca 144  Q
    |||||||||||| |||||||||||||||||||||||||||||         |||||||||||| ||||||||||||||||||||||||||||  ||||||    
T  35771104 agagttgggaatataagaaaaatcacgatggttatgatggtg---------atgggttggtggggatgaaggagagtgatggttgtggaata--gtgaca 35771192  T
Q  145 aaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttgcttttct 244  Q
    ||||||| ||||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |     
T  35771193 aaaaattatggtgttgagagtgtataataagactatgctctatacttaatctaaccgtttaaattagctttcccatggtgggaaacaactttgctttccc 35771292  T

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Target: chr2 (Bit Score: 129; Significance: 7e-67; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 129; E-Value: 7e-67
Query Start/End: Original strand, 45 - 237
Target Start/End: Original strand, 4386051 - 4386234
Alignment:
Q  45 agagttgggaatttaagaaaaatcacgatggttatgatggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgaca 144  Q
    |||||||||||||||||||||||||||||||||| |||||||         |||||||||||| |||||||||||||||||||||||||| |||||||||    
T  4386051 agagttgggaatttaagaaaaatcacgatggttacgatggtg---------atgggttggtggggatgaaggagagtgatggttgtggaagatagtgaca 4386141  T
Q  145 aaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttg 237  Q
    ||||||||| ||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  4386142 aaaaattctagtgttgagagtgtatgataagactatgctctatatttaatctaaccgtttaaattagctttcccatggtgggaaacaactttg 4386234  T

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Target: chr8 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 37562461 - 37562368
Alignment:
Q  81 atggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataaga 176  Q
    ||||||||| ||||  ||||||||||| |||||||||||| |||||| |||||| |||||||||||||  | | ||||||||||||||||||||||    
T  37562461 atggtgttgctggtggtgggttggtggggatgaaggagagagatggtagtggaagatagtgacaaaaa--tatagtgttgagagtgtatgataaga 37562368  T

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Target: chr8; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 43924604 - 43924514
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||||| |||||||||| || |||||||| | |||||| | || |||||||||| ||  ||||||||||||||||| |||||||||||||    
T  43924604 aaaaaatt-tggtgttgagtgtttatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtgggaaacaactt 43924514  T

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Target: chr8; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 43924951 - 43925042
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || |||||||| | |||||| | || |||||||||| ||  |||||| ||||| |||| |||||||||||||    
T  43924951 aaaaaaatctggtgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattaactttctcatggtgggaaacaactt 43925042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 144 - 252
Target Start/End: Complemental strand, 43971393 - 43971285
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttgcttttc 243  Q
    ||||||||||| |||||||  | |||||||| | |||||| | ||||| || |||  ||  ||||||||||||||||| |||||||||||||  | ||||    
T  43971393 aaaaaattctgatgttgagtctctatgataaaagtatgttctctactttatttaatggtcaaaattagctttcccatggtgggaaacaacttctcatttc 43971294  T
Q  244 tatactaaa 252  Q
     ||||||||    
T  43971293 catactaaa 43971285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 12350081 - 12349991
Alignment:
Q  145 aaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    ||||| |||||||||||| || |||||||| |  ||||| | ||||| ||||||  ||| ||||||| ||| ||||| |||||||||||||    
T  12350081 aaaaaatctggtgttgagtgtctatgataaaagcatgttctttactttatctaatggttaaaattagtttttccatggtgggaaacaactt 12349991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 12350587 - 12350675
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaa 232  Q
    |||||| |||||||||||| || |||||||| | |||||| | ||| | ||||||  ||  ||||||| ||||||||| ||||||||||    
T  12350587 aaaaaaatctggtgttgagtgtctatgataaaagtatgttctctaccttatctaatggtcaaaattaggtttcccatggtgggaaacaa 12350675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 4e-19; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 81 - 176
Target Start/End: Complemental strand, 38931480 - 38931387
Alignment:
Q  81 atggtgttgatggttatgggttggtggagatgaaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataaga 176  Q
    ||||||||| ||||  ||||||||||| |||||||||||| |||||| |||||| |||||||||||||  | | ||||||||||||||||||||||    
T  38931480 atggtgttgctggtggtgggttggtggggatgaaggagagagatggtagtggaagatagtgacaaaaa--tatagtgttgagagtgtatgataaga 38931387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 14924789 - 14924698
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || |||||||| | |||||| | || ||||| |||| ||  ||||||||||||||||| |||||||||||||    
T  14924789 aaaaaaatctggtgttgagtgtctatgataaaaatatgttctctatttaatttaacggtcaaaattagctttcccatggtgggaaacaactt 14924698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 236
Target Start/End: Original strand, 14925275 - 14925367
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaacttt 236  Q
    |||||| |||||||||||| || |||||||| | |||||| | || || ||||||  ||  ||||||||||||||||| ||||||||||||||    
T  14925275 aaaaaaatctggtgttgagtgtctatgataaaagtatgttctctagtttatctaatggtcaaaattagctttcccatggtgggaaacaacttt 14925367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 11469196 - 11469105
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || |||||||| | |||||| | ||| | ||||||  ||  ||||||||||||||||| |||||||||||||    
T  11469196 aaaaaaatctggtgttgagtgtctatgataaaagtatgttctctaccttatctaatggtcaaaattagctttcccatggtgggaaacaactt 11469105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 86 - 176
Target Start/End: Original strand, 38932014 - 38932103
Alignment:
Q  86 gttgatggttatgggttggtggag-atgaaggagagtgatggttgtggaatatagtgacaaaaaattctggtgttgagagtgtatgataaga 176  Q
    |||| |||||||||||| |||||| ||||| || || |||||| |||||| |||||||||||||  | | ||||||||||||||||| ||||    
T  38932014 gttgctggttatgggtttgtggaggatgaatgaaagagatggtagtggaagatagtgacaaaaa--tatagtgttgagagtgtatgacaaga 38932103  T

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Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 145 - 235
Target Start/End: Original strand, 31788210 - 31788300
Alignment:
Q  145 aaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    ||||| |||||||||||| || |||| ||| | |||||| | || || ||||||  ||| |||||| |||||||||| |||||||||||||    
T  31788210 aaaaaatctggtgttgagtgtctatggtaaaagtatgttctctattttatctaatggttaaaattaactttcccatggtgggaaacaactt 31788300  T

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Target: chr4 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 4)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 153 - 235
Target Start/End: Complemental strand, 15481141 - 15481059
Alignment:
Q  153 tggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    ||||||||||||| |||||||| | |||||| | || |||||||||| ||  |||||||||||||||||| ||||||||||||    
T  15481141 tggtgttgagagtctatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatgacgggaaacaactt 15481059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 144 - 235
Target Start/End: Original strand, 10421514 - 10421605
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || |||||||| | |||||| | || |||||||||| ||  ||||||||||||||||| ||| |||||||||    
T  10421514 aaaaaaatctggtgttgagtgtctatgataaaaatatgttctctatttaatctaacggtcaaaattagctttcccatggtggaaaacaactt 10421605  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 155 - 220
Target Start/End: Complemental strand, 43079264 - 43079199
Alignment:
Q  155 gtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccat 220  Q
    |||||||||||| |||||||||||||||| | ||||| ||||||  | | |||||| |||||||||    
T  43079264 gtgttgagagtgcatgataagactatgttctttacttgatctaatggataaaattaactttcccat 43079199  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 198
Target Start/End: Original strand, 11029766 - 11029826
Alignment:
Q  138 agtgacaaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaa 198  Q
    |||||||||||| ||| ||||||||||||||| |||||| | |||| | ||||| ||||||    
T  11029766 agtgacaaaaaaatctcgtgttgagagtgtataataagattgtgttctttacttgatctaa 11029826  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 144 - 235
Target Start/End: Complemental strand, 27763528 - 27763437
Alignment:
Q  144 aaaaaattctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactt 235  Q
    |||||| |||||||||||| || | |||||| | |||||| | || |||||||||| ||  ||||||| |||||| || |||||||||||||    
T  27763528 aaaaaaatctggtgttgagtgtctttgataaaaatatgttctctatttaatctaacggtcaaaattagttttcccttggtgggaaacaactt 27763437  T

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Target: chr5 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 152 - 252
Target Start/End: Complemental strand, 4554764 - 4554664
Alignment:
Q  152 ctggtgttgagagtgtatgataagactatgttttatacttaatctaaccgtttaaattagctttcccatgatgggaaacaactttgcttttctatactaa 251  Q
    ||||||||||| || |||||||| | |||||| | ||||| ||||||  ||  |||||||||||| |||| ||| |||||| ||| |||| | |||||||    
T  4554764 ctggtgttgagtgtctatgataaaagtatgttctctactttatctaatggtcaaaattagctttctcatggtggaaaacaattttcctttcccatactaa 4554665  T
Q  252 a 252  Q
    |    
T  4554664 a 4554664  T

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