View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8461_high_6 (Length: 251)
Name: NF8461_high_6
Description: NF8461
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8461_high_6 |
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Alignment Details
Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 48202859 - 48202628
Alignment:
| Q |
1 |
gtttatgataaaggagttacctcttccacctgcaatgttgcatcctaaggaatcattttcttcaaataatatgaaaagggtaacttctgaacgaaggact |
100 |
Q |
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| T |
48202859 |
gtttatgataaaggagttacctcttccacctgcaatgttgcatcctaaggaatcattttcttcaaataatatgaaaagggtaacttctgaacgaaggact |
48202760 |
T |
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| Q |
101 |
tcttatagtttaagcattaaaatgccaactttgccaaggaatttgtcaattgcgaaaaactgggatcatctaaaggaggagaaatttaaaccattggtga |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
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| T |
48202759 |
tcttttagtttaagcattaaaatgccaactttgccaaggaatttgtcaattgcgaaaaattgggatcatctaaaggaggagaaatttaaaccattggtga |
48202660 |
T |
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| Q |
201 |
aaacagaagaatctgtttggatgaaaacaatt |
232 |
Q |
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|||||||||||||||||||||||||||||||| |
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| T |
48202659 |
aaacagaagaatctgtttggatgaaaacaatt |
48202628 |
T |
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