View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8463_high_8 (Length: 462)

Name: NF8463_high_8
Description: NF8463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8463_high_8
NF8463_high_8
[»] chr3 (14 HSPs)
chr3 (1-435)||(27370342-27370776)
chr3 (140-430)||(18723109-18723399)
chr3 (140-436)||(27344030-27344308)
chr3 (28-283)||(26116994-26117249)
chr3 (28-273)||(26145008-26145253)
chr3 (28-274)||(26239267-26239513)
chr3 (1-233)||(18081033-18081265)
chr3 (28-273)||(26183454-26183699)
chr3 (323-436)||(27400964-27401077)
chr3 (28-274)||(26212060-26212306)
chr3 (20-154)||(18031292-18031426)
chr3 (300-358)||(18031067-18031125)
chr3 (374-436)||(18080809-18080871)
chr3 (390-436)||(19467667-19467713)
[»] scaffold0854 (1 HSPs)
scaffold0854 (1-442)||(3996-4437)
[»] scaffold1344 (1 HSPs)
scaffold1344 (140-443)||(717-1002)
[»] scaffold0043 (1 HSPs)
scaffold0043 (140-436)||(72945-73223)


Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 27370342 - 27370776
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||    
T  27370342 tgtactaaaactcaaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaatttagaggagctaacaatccaaaaa 27370441  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| |||    
T  27370442 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccatatattcatgtcctatgctggtttctgtttttgatc 27370541  T
Q  201 tctcaacttctcgaggcctgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 300  Q
    | ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27370542 tgtcaacttctcgaggcctgccgctgttggagaaattgcgcatagatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 27370641  T
Q  301 tggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgt 400  Q
    ||||||||||||||  ||  |||||| ||||||||||||||||||||||||||||||| |||||  |  |||||||||||||||||||||||||||||||    
T  27370642 tggtgataatgataataacgatagttacaactcaatgtttccaaatctgaaatttctcaatattattcgatgccccaaattacaatttgtacttccatgt 27370741  T
Q  401 tactctgctagagactttttgttactagaatctat 435  Q
    |||| |||| |||||||||||||||||||||||||    
T  27370742 tactatgctggagactttttgttactagaatctat 27370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 140 - 430
Target Start/End: Complemental strand, 18723399 - 18723109
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||||||||| |||||||||   ||||||||||||||||||||||| ||| || | ||||||||||||||||||| |||||||||| |||||     
T  18723399 ttctccaatctaaagaatgtgaccttaagatcatgttctatgttggtttctgtttttgatttgtcaacttctcgaggcctgctgctgttggaggaattga 18723300  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
      |||| | |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| || | |||||||||||||||    
T  18723299 taatatttaattgtgagaaattggaaagcataattacaattgaatgtgaagaaatagttgatggtgataatgataacaacaaaatttgcaactcaatgtt 18723200  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaa 430  Q
    ||||||||||||| || ||   ||||     || | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18723199 tccaaatctgaaagttgtcataattgactggtgtcaccaattacaatttgtacttccatgttactctgctcgagactttttgttactagaa 18723109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 140 - 436
Target Start/End: Original strand, 27344030 - 27344308
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||| |||||||||||||||   ||||||||||||||||||||||| ||| |||| ||||||||| ||||||||| ||| |||||||||||||    
T  27344030 ttctccaatcttaagaacgtgaccttaagatcatgttctatgttggtttctgtttttgatctgtcaacttctagaggcctgctgctattggagaaattgg 27344129  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||  |||||| ||| | ||||||||||||||||||||||| |||||                  ||||||||  || ||||||||||||||||||||    
T  27344130 aaataattgattgcgagaaattggaaaacataattacaactgattgtga------------------taatgataataacaatagttgcaactcaatgtt 27344211  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||||||||||   |||||  ||||| | | ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  27344212 tccaaatctgaaatttctttgtattgaaaaatgtcaccaattacaatttatacttccatgtcactctgctggagactttttgttactagaatctatc 27344308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 283
Target Start/End: Complemental strand, 26117249 - 26116994
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||  | |  | || |||  || ||||| |||||||||||||    
T  26117249 tttggaagaattatgcaatggtcccatctcctttgactcaatgaacaatttagaggagctatatgtgaacgagtgtaaaaatttgcaaagcttgtttaaa 26117150  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgac-cttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctg 226  Q
    |||||| ||||| || |||||||||||| |||||| || ||| ||||| || |  ||||||||||| ||| | || || ||||||| | || ||||||||    
T  26117149 tgcagcctaaatctcagcaatctaaagaccgtgacactaata-tcatgctcaagattggtttctgtttttgaactgtccacttctcaaagcttgccgctg 26117051  T
Q  227 ttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaa 283  Q
    |||||| ||||||| |||  |||||||||| | |||||||||||||| |||| ||||    
T  26117050 ttggaggaattggaaataattgattgtgagaaattggaaaacataatcacaattgaa 26116994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 273
Target Start/End: Complemental strand, 26145253 - 26145008
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||  |||||||||||   |||  |||| |||| || ||||| |||||||||||||    
T  26145253 tttggaagaattatgcaatggtcccatctcctttgactcaatgaacactttagaggagctgtatattaaggagtgtgaaaatttgcaaagcttgtttaaa 26145154  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||||||||||||  ||||  ||| | ||||| || |  ||||||||||| ||| |  | || ||||||| | || | || ||||    
T  26145153 tgcagcctaaatctcagcaatctaaagactgtgaaattaaaatcatgctcaagattggtttctgtttttgaaatgtccacttctcaaagctttccactgt 26145054  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataat 273  Q
    ||||||||||| | |||  |||||||||| | ||||||||||||||    
T  26145053 tggagaaattgaaaataattgattgtgagaaattggaaaacataat 26145008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 274
Target Start/End: Complemental strand, 26239513 - 26239267
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||  || |||||| | |||||| |||||| ||||| ||||| |||| |||| || |||||||||||||||||||    
T  26239513 tttggaagaattatgcaatggtcccatcgcctttgactcaacgaacaatttagagaagctatctatcaaggagtgtgaaaatttgcgaagcttgtttaaa 26239414  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||| ||||||||  |||   ||| |   ||| || |  ||||||||||| ||| | || |||||||||| | || |||||||||    
T  26239413 tgcagcctaaatctcagcagtctaaagactgtggaattagaacaatgctcaaaattggtttctgtttttgaactatcaacttctcaaagcttgccgctgt 26239314  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataatt 274  Q
    ||||| ||||| | |||  | ||||| || | |||||||||||||||    
T  26239313 tggaggaattgaaaatagttaattgtaagaaattggaaaacataatt 26239267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18081265 - 18081033
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||| | || ||||||||| | |||||||||||||||||||||||||||||||    ||| || |||||||| |||||||||||||| ||  ||       
T  18081265 tgtactacatcttgaggaaatggaaaatttggaagaattatgcaatggtcccatctcaattgattcaatgaacaatttagaggagctaaccatggagtgc 18081166  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    |||  | |||||| ||  |||| |||||||||| ||||| |  ||||||| |||||| ||||| || | |||||| | | |||||||||||| ||| | |    
T  18081165 tgtcaacttttgcaaacattgtctaaatgcagcctaaatcttcgcaatctgaagaacatgaccctaaaatcatgtccaacgttggtttctgtttttgacc 18081066  T
Q  201 tctcaacttctcgaggcctgccgctgttggaga 233  Q
    | ||||| |||||| |||||| |||||||||||    
T  18081065 tgtcaacatctcgaagcctgctgctgttggaga 18081033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 273
Target Start/End: Complemental strand, 26183699 - 26183454
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    ||| |  ||||   |||| | || |||  || |||||||||||||||||||    
T  26183699 tttggaagaattatgcaatggtcccatctcctctgactcaatgaattttttaaaaaagctgtatatcaacgagtgtaaaaatttgcgaagcttgtttaaa 26183600  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtg-accttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctg 226  Q
    |||||| ||||| || |||| |||||||  ||| | || ||| ||||| || |  ||||||||||| ||| | || |||||||||| | || |||| |||    
T  26183599 tgcagcctaaatctcagcaaactaaagacggtgaaactaata-tcatgctcaagattggtttctgtttttaaactgtcaacttctcaaagcttgccactg 26183501  T
Q  227 ttggagaaattggacatatatgattgtgagcagttggaaaacataat 273  Q
    |||||| ||||| | |||  |||||||||| | ||||||||||||||    
T  26183500 ttggaggaattgaatatagttgattgtgagaaattggaaaacataat 26183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 27401077 - 27400964
Alignment:
Q  323 agttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgt 422  Q
    ||||||||||||||||||||||| |||||| |||||  ||||  | |||||||  ||||||||||| ||||||||| | |||||||| || || ||||||    
T  27401077 agttgcaactcaatgtttccaaacctgaaagttctcagtatttatcaatgccctcaattacaatttatacttccatatcactctgctggaaaccttttgt 27400978  T
Q  423 tactagaatctatc 436  Q
     |||||||||||||    
T  27400977 cactagaatctatc 27400964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 274
Target Start/End: Complemental strand, 26212306 - 26212060
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||    ||  |  ||||   |||| |||| |||| || |||||||||||||||||||    
T  26212306 tttggaagaattatgcaatggtcccatctcctatgactcaatgaaattttttaaaaagctgtatatcaaggagtgtgaaaatttgcgaagcttgtttaaa 26212207  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||| ||||||||  |||   ||| |   ||| || |  ||||||||||| ||| | || |||||||||| | || |||||||||    
T  26212206 tgcagcctaaatctcagcagtctaaagattgtggaattaaaacaatgctcaaaattggtttctgtttttgaactatcaacttctcaaagcttgccgctgt 26212107  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataatt 274  Q
    ||||||||||| | |||  | ||||| || | |||||||||||||||    
T  26212106 tggagaaattgaaaatagttaattgtaagaaattggaaaacataatt 26212060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 18031426 - 18031292
Alignment:
Q  20 atgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagct 119  Q
    |||||||| ||||||||||| ||||| ||| | |||||||  |||||| ||||||| |||||| | ||| ||||| |||| |||   ||||| | ||||     
T  18031426 atgaagaaattggaagaattgtgcaacggttcaatcttcttggactctctgaacaatttagagaatctatctatcaaggagtgtaacatttttcaaagcc 18031327  T
Q  120 tgtttaaatgcagcataaatttctgcaatctaaag 154  Q
    |||||||||||||| | ||| ||||||| ||||||    
T  18031326 tgtttaaatgcagcctgaatctctgcaagctaaag 18031292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 18031125 - 18031067
Alignment:
Q  300 atggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctc 358  Q
    |||||||||||||||  |  ||||||||||||||||||||| |||| |||||| |||||    
T  18031125 atggtgataatgataaaatgaatagttgcaactcaatgttttcaaagctgaaagttctc 18031067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 436
Target Start/End: Complemental strand, 18080871 - 18080809
Alignment:
Q  374 cccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||||||| ||||||||| |  ||||| | ||||| |||||||||||||| |||||    
T  18080871 cccaaattacaatttatacttccatttatctctgatggagaccttttgttactagaaactatc 18080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 19467667 - 19467713
Alignment:
Q  390 tacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||||    
T  19467667 tacttccatgtcactctgctggagaccttttgtcactagaatctatc 19467713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 4437 - 3996
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  | ||    
T  4437 tgtactagaactcaaggaaatgaagaatttggaagaattatgcaatggtcccatcttctttgactctatgaacaatttagaggagctaactatcttgaaa 4338  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||     
T  4337 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttgtatgttggtttctgtttttgata 4238  T
Q  201 tctcaacttctcgaggcctgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 300  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4237 tgtcaacttctcgaggcttgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgc 4138  T
Q  301 tggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgt 400  Q
     | |||||||||||  || || ||||||||||||||||||||||||||||||||||||  |||||   ||||   | |||||||||||  |||||||| |    
T  4137 cgctgataatgataaaaacaaaagttgcaactcaatgtttccaaatctgaaatttctctgtattgaagaatgtgaccaattacaatttacacttccattt 4038  T
Q  401 tactctgctagagactttttgttactagaatctatccagata 442  Q
     |||||||| |||||||||||||||||||||||||| |||||    
T  4037 cactctgctggagactttttgttactagaatctatcaagata 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1344 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold1344
Description:

Target: scaffold1344; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 140 - 443
Target Start/End: Original strand, 717 - 1002
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||||||||| ||||| |||  |||||||||||||||||||||||| ||| |||| |||||| || |||| |||| ||| ||||||||||||     
T  717 ttctccaatctaaagaaggtgactttaatttcatgttctatgttggtttctgtttttgatctgtcaactgctagaggactgctgctattggagaaattga 816  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||  |||||| ||| | ||||||||||||||||||||||| |||||                  ||||||||  |||||||||||||||||||||||    
T  817 aaataattgattgcgagaaattggaaaacataattacaactgattgtga------------------taatgataataaaaatagttgcaactcaatgtt 898  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatccag 439  Q
    |||||||||||||||||||  |||||  ||||| | ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| ||    
T  899 tccaaatctgaaatttctctgtattgaaaaatgtcacaaattacaatttatacttccatgtcactctgctggagactttttgttactagaatatatcaag 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 140 - 436
Target Start/End: Complemental strand, 73223 - 72945
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| ||||||||| | |||||| ||| ||||||||||||||||||||||| | ||| || | ||||||||| ||||||||| ||| ||||||| ||||     
T  73223 ttctccaatctaaaaaccgtgactttagattcatgttctatgttggtttctatttttgatatgtcaacttctagaggcctgctgctattggagacattga 73124  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||| | ||||  || | ||||||||||||||||||||||| |||||                  ||||||||  || ||||||||||||||||||||    
T  73123 aaatatttcattgcaagaaattggaaaacataattacaactgattgtga------------------taatgataataacaatagttgcaactcaatgtt 73042  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||| |||||||||||  ||||  | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  73041 tccaaatttgaaatttctctgtatttatgacagccccaaattacaatttgtacttccatgttactctgctggagactttttgttactagaatatatc 72945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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