View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8463_low_10 (Length: 462)

Name: NF8463_low_10
Description: NF8463
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8463_low_10
NF8463_low_10
[»] chr3 (14 HSPs)
chr3 (1-435)||(27370342-27370776)
chr3 (140-430)||(18723109-18723399)
chr3 (140-436)||(27344030-27344308)
chr3 (28-283)||(26116994-26117249)
chr3 (28-273)||(26145008-26145253)
chr3 (28-274)||(26239267-26239513)
chr3 (1-233)||(18081033-18081265)
chr3 (28-273)||(26183454-26183699)
chr3 (323-436)||(27400964-27401077)
chr3 (28-274)||(26212060-26212306)
chr3 (20-154)||(18031292-18031426)
chr3 (300-358)||(18031067-18031125)
chr3 (374-436)||(18080809-18080871)
chr3 (390-436)||(19467667-19467713)
[»] scaffold0854 (1 HSPs)
scaffold0854 (1-442)||(3996-4437)
[»] scaffold1344 (1 HSPs)
scaffold1344 (140-443)||(717-1002)
[»] scaffold0043 (1 HSPs)
scaffold0043 (140-436)||(72945-73223)


Alignment Details
Target: chr3 (Bit Score: 327; Significance: 0; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 327; E-Value: 0
Query Start/End: Original strand, 1 - 435
Target Start/End: Original strand, 27370342 - 27370776
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||  ||    
T  27370342 tgtactaaaactcaaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaatttagaggagctaacaatccaaaaa 27370441  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| |||||||||| ||| |||    
T  27370442 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccatatattcatgtcctatgctggtttctgtttttgatc 27370541  T
Q  201 tctcaacttctcgaggcctgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 300  Q
    | ||||||||||||||||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27370542 tgtcaacttctcgaggcctgccgctgttggagaaattgcgcatagatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 27370641  T
Q  301 tggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgt 400  Q
    ||||||||||||||  ||  |||||| ||||||||||||||||||||||||||||||| |||||  |  |||||||||||||||||||||||||||||||    
T  27370642 tggtgataatgataataacgatagttacaactcaatgtttccaaatctgaaatttctcaatattattcgatgccccaaattacaatttgtacttccatgt 27370741  T
Q  401 tactctgctagagactttttgttactagaatctat 435  Q
    |||| |||| |||||||||||||||||||||||||    
T  27370742 tactatgctggagactttttgttactagaatctat 27370776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 140 - 430
Target Start/End: Complemental strand, 18723399 - 18723109
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||||||||| |||||||||   ||||||||||||||||||||||| ||| || | ||||||||||||||||||| |||||||||| |||||     
T  18723399 ttctccaatctaaagaatgtgaccttaagatcatgttctatgttggtttctgtttttgatttgtcaacttctcgaggcctgctgctgttggaggaattga 18723300  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
      |||| | |||||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||| ||| || | |||||||||||||||    
T  18723299 taatatttaattgtgagaaattggaaagcataattacaattgaatgtgaagaaatagttgatggtgataatgataacaacaaaatttgcaactcaatgtt 18723200  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaa 430  Q
    ||||||||||||| || ||   ||||     || | | |||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18723199 tccaaatctgaaagttgtcataattgactggtgtcaccaattacaatttgtacttccatgttactctgctcgagactttttgttactagaa 18723109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 140 - 436
Target Start/End: Original strand, 27344030 - 27344308
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||| |||||||||||||||   ||||||||||||||||||||||| ||| |||| ||||||||| ||||||||| ||| |||||||||||||    
T  27344030 ttctccaatcttaagaacgtgaccttaagatcatgttctatgttggtttctgtttttgatctgtcaacttctagaggcctgctgctattggagaaattgg 27344129  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||  |||||| ||| | ||||||||||||||||||||||| |||||                  ||||||||  || ||||||||||||||||||||    
T  27344130 aaataattgattgcgagaaattggaaaacataattacaactgattgtga------------------taatgataataacaatagttgcaactcaatgtt 27344211  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||||||||||   |||||  ||||| | | ||||||||||| ||||||||||| |||||||| ||||||||||||||||||||||||||    
T  27344212 tccaaatctgaaatttctttgtattgaaaaatgtcaccaattacaatttatacttccatgtcactctgctggagactttttgttactagaatctatc 27344308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 28 - 283
Target Start/End: Complemental strand, 26117249 - 26116994
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||| ||||||||||||  | |  | || |||  || ||||| |||||||||||||    
T  26117249 tttggaagaattatgcaatggtcccatctcctttgactcaatgaacaatttagaggagctatatgtgaacgagtgtaaaaatttgcaaagcttgtttaaa 26117150  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgac-cttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctg 226  Q
    |||||| ||||| || |||||||||||| |||||| || ||| ||||| || |  ||||||||||| ||| | || || ||||||| | || ||||||||    
T  26117149 tgcagcctaaatctcagcaatctaaagaccgtgacactaata-tcatgctcaagattggtttctgtttttgaactgtccacttctcaaagcttgccgctg 26117051  T
Q  227 ttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaa 283  Q
    |||||| ||||||| |||  |||||||||| | |||||||||||||| |||| ||||    
T  26117050 ttggaggaattggaaataattgattgtgagaaattggaaaacataatcacaattgaa 26116994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 28 - 273
Target Start/End: Complemental strand, 26145253 - 26145008
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||||  |||||||||||   |||  |||| |||| || ||||| |||||||||||||    
T  26145253 tttggaagaattatgcaatggtcccatctcctttgactcaatgaacactttagaggagctgtatattaaggagtgtgaaaatttgcaaagcttgtttaaa 26145154  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||||||||||||  ||||  ||| | ||||| || |  ||||||||||| ||| |  | || ||||||| | || | || ||||    
T  26145153 tgcagcctaaatctcagcaatctaaagactgtgaaattaaaatcatgctcaagattggtttctgtttttgaaatgtccacttctcaaagctttccactgt 26145054  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataat 273  Q
    ||||||||||| | |||  |||||||||| | ||||||||||||||    
T  26145053 tggagaaattgaaaataattgattgtgagaaattggaaaacataat 26145008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 28 - 274
Target Start/End: Complemental strand, 26239513 - 26239267
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||  || |||||| | |||||| |||||| ||||| ||||| |||| |||| || |||||||||||||||||||    
T  26239513 tttggaagaattatgcaatggtcccatcgcctttgactcaacgaacaatttagagaagctatctatcaaggagtgtgaaaatttgcgaagcttgtttaaa 26239414  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||| ||||||||  |||   ||| |   ||| || |  ||||||||||| ||| | || |||||||||| | || |||||||||    
T  26239413 tgcagcctaaatctcagcagtctaaagactgtggaattagaacaatgctcaaaattggtttctgtttttgaactatcaacttctcaaagcttgccgctgt 26239314  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataatt 274  Q
    ||||| ||||| | |||  | ||||| || | |||||||||||||||    
T  26239313 tggaggaattgaaaatagttaattgtaagaaattggaaaacataatt 26239267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 18081265 - 18081033
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||| | || ||||||||| | |||||||||||||||||||||||||||||||    ||| || |||||||| |||||||||||||| ||  ||       
T  18081265 tgtactacatcttgaggaaatggaaaatttggaagaattatgcaatggtcccatctcaattgattcaatgaacaatttagaggagctaaccatggagtgc 18081166  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    |||  | |||||| ||  |||| |||||||||| ||||| |  ||||||| |||||| ||||| || | |||||| | | |||||||||||| ||| | |    
T  18081165 tgtcaacttttgcaaacattgtctaaatgcagcctaaatcttcgcaatctgaagaacatgaccctaaaatcatgtccaacgttggtttctgtttttgacc 18081066  T
Q  201 tctcaacttctcgaggcctgccgctgttggaga 233  Q
    | ||||| |||||| |||||| |||||||||||    
T  18081065 tgtcaacatctcgaagcctgctgctgttggaga 18081033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 28 - 273
Target Start/End: Complemental strand, 26183699 - 26183454
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||    ||| |  ||||   |||| | || |||  || |||||||||||||||||||    
T  26183699 tttggaagaattatgcaatggtcccatctcctctgactcaatgaattttttaaaaaagctgtatatcaacgagtgtaaaaatttgcgaagcttgtttaaa 26183600  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtg-accttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctg 226  Q
    |||||| ||||| || |||| |||||||  ||| | || ||| ||||| || |  ||||||||||| ||| | || |||||||||| | || |||| |||    
T  26183599 tgcagcctaaatctcagcaaactaaagacggtgaaactaata-tcatgctcaagattggtttctgtttttaaactgtcaacttctcaaagcttgccactg 26183501  T
Q  227 ttggagaaattggacatatatgattgtgagcagttggaaaacataat 273  Q
    |||||| ||||| | |||  |||||||||| | ||||||||||||||    
T  26183500 ttggaggaattgaatatagttgattgtgagaaattggaaaacataat 26183454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 323 - 436
Target Start/End: Complemental strand, 27401077 - 27400964
Alignment:
Q  323 agttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgt 422  Q
    ||||||||||||||||||||||| |||||| |||||  ||||  | |||||||  ||||||||||| ||||||||| | |||||||| || || ||||||    
T  27401077 agttgcaactcaatgtttccaaacctgaaagttctcagtatttatcaatgccctcaattacaatttatacttccatatcactctgctggaaaccttttgt 27400978  T
Q  423 tactagaatctatc 436  Q
     |||||||||||||    
T  27400977 cactagaatctatc 27400964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 28 - 274
Target Start/End: Complemental strand, 26212306 - 26212060
Alignment:
Q  28 tttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagcttgtttaaa 127  Q
    ||||||||||||||||||||||||||||| || |||||| |||||    ||  |  ||||   |||| |||| |||| || |||||||||||||||||||    
T  26212306 tttggaagaattatgcaatggtcccatctcctatgactcaatgaaattttttaaaaagctgtatatcaaggagtgtgaaaatttgcgaagcttgtttaaa 26212207  T
Q  128 tgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgt 227  Q
    |||||| ||||| || ||| ||||||||  |||   ||| |   ||| || |  ||||||||||| ||| | || |||||||||| | || |||||||||    
T  26212206 tgcagcctaaatctcagcagtctaaagattgtggaattaaaacaatgctcaaaattggtttctgtttttgaactatcaacttctcaaagcttgccgctgt 26212107  T
Q  228 tggagaaattggacatatatgattgtgagcagttggaaaacataatt 274  Q
    ||||||||||| | |||  | ||||| || | |||||||||||||||    
T  26212106 tggagaaattgaaaatagttaattgtaagaaattggaaaacataatt 26212060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 20 - 154
Target Start/End: Complemental strand, 18031426 - 18031292
Alignment:
Q  20 atgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaatgtggaattttgcgaagct 119  Q
    |||||||| ||||||||||| ||||| ||| | |||||||  |||||| ||||||| |||||| | ||| ||||| |||| |||   ||||| | ||||     
T  18031426 atgaagaaattggaagaattgtgcaacggttcaatcttcttggactctctgaacaatttagagaatctatctatcaaggagtgtaacatttttcaaagcc 18031327  T
Q  120 tgtttaaatgcagcataaatttctgcaatctaaag 154  Q
    |||||||||||||| | ||| ||||||| ||||||    
T  18031326 tgtttaaatgcagcctgaatctctgcaagctaaag 18031292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 300 - 358
Target Start/End: Complemental strand, 18031125 - 18031067
Alignment:
Q  300 atggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctc 358  Q
    |||||||||||||||  |  ||||||||||||||||||||| |||| |||||| |||||    
T  18031125 atggtgataatgataaaatgaatagttgcaactcaatgttttcaaagctgaaagttctc 18031067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 374 - 436
Target Start/End: Complemental strand, 18080871 - 18080809
Alignment:
Q  374 cccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||||||| ||||||||| |  ||||| | ||||| |||||||||||||| |||||    
T  18080871 cccaaattacaatttatacttccatttatctctgatggagaccttttgttactagaaactatc 18080809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 390 - 436
Target Start/End: Original strand, 19467667 - 19467713
Alignment:
Q  390 tacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||||||| |||||||| ||||| |||||| |||||||||||||    
T  19467667 tacttccatgtcactctgctggagaccttttgtcactagaatctatc 19467713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0854 (Bit Score: 306; Significance: 1e-172; HSPs: 1)
Name: scaffold0854
Description:

Target: scaffold0854; HSP #1
Raw Score: 306; E-Value: 1e-172
Query Start/End: Original strand, 1 - 442
Target Start/End: Complemental strand, 4437 - 3996
Alignment:
Q  1 tgtactagaactcgaggaaatgaagaatttggaagaattatgcaatggtcccatcttctctgactctatgaacaaattagaggagctaactatccaggaa 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||  | ||    
T  4437 tgtactagaactcaaggaaatgaagaatttggaagaattatgcaatggtcccatcttctttgactctatgaacaatttagaggagctaactatcttgaaa 4338  T
Q  101 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatc 200  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||| ||     
T  4337 tgtggaattttgcgaagcttgtttaaatgcagcataaatttctgcaatctaaagaacgtgaccttatattcatgttgtatgttggtttctgtttttgata 4238  T
Q  201 tctcaacttctcgaggcctgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttga 300  Q
    | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  4237 tgtcaacttctcgaggcttgccgctgttggagaaattggacatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgc 4138  T
Q  301 tggtgataatgatatcaaaaatagttgcaactcaatgtttccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgt 400  Q
     | |||||||||||  || || ||||||||||||||||||||||||||||||||||||  |||||   ||||   | |||||||||||  |||||||| |    
T  4137 cgctgataatgataaaaacaaaagttgcaactcaatgtttccaaatctgaaatttctctgtattgaagaatgtgaccaattacaatttacacttccattt 4038  T
Q  401 tactctgctagagactttttgttactagaatctatccagata 442  Q
     |||||||| |||||||||||||||||||||||||| |||||    
T  4037 cactctgctggagactttttgttactagaatctatcaagata 3996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1344 (Bit Score: 109; Significance: 1e-54; HSPs: 1)
Name: scaffold1344
Description:

Target: scaffold1344; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 140 - 443
Target Start/End: Original strand, 717 - 1002
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| |||||||||||| ||||| |||  |||||||||||||||||||||||| ||| |||| |||||| || |||| |||| ||| ||||||||||||     
T  717 ttctccaatctaaagaaggtgactttaatttcatgttctatgttggtttctgtttttgatctgtcaactgctagaggactgctgctattggagaaattga 816  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||  |||||| ||| | ||||||||||||||||||||||| |||||                  ||||||||  |||||||||||||||||||||||    
T  817 aaataattgattgcgagaaattggaaaacataattacaactgattgtga------------------taatgataataaaaatagttgcaactcaatgtt 898  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatccag 439  Q
    |||||||||||||||||||  |||||  ||||| | ||||||||||||| ||||||||||| |||||||| ||||||||||||||||||||| |||| ||    
T  899 tccaaatctgaaatttctctgtattgaaaaatgtcacaaattacaatttatacttccatgtcactctgctggagactttttgttactagaatatatcaag 998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 94; Significance: 1e-45; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 140 - 436
Target Start/End: Complemental strand, 73223 - 72945
Alignment:
Q  140 ttctgcaatctaaagaacgtgaccttatattcatgttctatgttggtttctgtgttttatctctcaacttctcgaggcctgccgctgttggagaaattgg 239  Q
    |||| ||||||||| | |||||| ||| ||||||||||||||||||||||| | ||| || | ||||||||| ||||||||| ||| ||||||| ||||     
T  73223 ttctccaatctaaaaaccgtgactttagattcatgttctatgttggtttctatttttgatatgtcaacttctagaggcctgctgctattggagacattga 73124  T
Q  240 acatatatgattgtgagcagttggaaaacataattacaactgaatgtgaagaaatagttgatggtgataatgatatcaaaaatagttgcaactcaatgtt 339  Q
    | |||| | ||||  || | ||||||||||||||||||||||| |||||                  ||||||||  || ||||||||||||||||||||    
T  73123 aaatatttcattgcaagaaattggaaaacataattacaactgattgtga------------------taatgataataacaatagttgcaactcaatgtt 73042  T
Q  340 tccaaatctgaaatttctcgatattggtaaatgccccaaattacaatttgtacttccatgttactctgctagagactttttgttactagaatctatc 436  Q
    ||||||| |||||||||||  ||||  | |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  73041 tccaaatttgaaatttctctgtatttatgacagccccaaattacaatttgtacttccatgttactctgctggagactttttgttactagaatatatc 72945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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