View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8464_high_1 (Length: 277)
Name: NF8464_high_1
Description: NF8464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8464_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 233; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 233; E-Value: 1e-129
Query Start/End: Original strand, 8 - 259
Target Start/End: Original strand, 41176086 - 41176338
Alignment:
| Q |
8 |
attgctctgacagtgttataacaatattaaaaggacttgaaaaatttgttaaaataaaatccttcaagacatttctctaaaacatatatattttttggtt |
107 |
Q |
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| T |
41176086 |
attgctctgacagtgttataacaatattaaaaggacttgaaaaatttgttaaaataaaatccttcaagacatttctctaaaacatatatattttttggtt |
41176185 |
T |
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| Q |
108 |
tctttatatgaaaacgttttaattttgtagagaaatataaaccctaatatgaaatgctggacgcctatattcccttcatcatttctttccttccaaatcc |
207 |
Q |
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| T |
41176186 |
tctccatatgaaaacgttttaattttgtagagaaatataaaccctaatatgaaatgctggacgcctatattcctttcatcatttctttccttccaaatcc |
41176285 |
T |
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| Q |
208 |
t-cttcatctttcttacctaaagttattttctttcttgtatccatacccactg |
259 |
Q |
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| T |
41176286 |
tccttcatctttcttacctaaagttattttctttcttgtatccatacccactg |
41176338 |
T |
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