View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8464_high_2 (Length: 214)
Name: NF8464_high_2
Description: NF8464
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8464_high_2 |
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Alignment Details
Target: chr6 (Bit Score: 178; Significance: 3e-96; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 178; E-Value: 3e-96
Query Start/End: Original strand, 20 - 197
Target Start/End: Original strand, 5684163 - 5684340
Alignment:
| Q |
20 |
caaacctcatcacaatgtcttggttccttacaattctgtttctcagtctcacatttggtactaatttttcagaagcaaaccatgacaacaagaagcttct |
119 |
Q |
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| T |
5684163 |
caaacctcatcacaatgtcttggttccttacaattctgtttctcagtctcacatttggtactaatttttcagaagcaaaccatgacaacaagaagcttct |
5684262 |
T |
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| Q |
120 |
tccttcacctgttgtagttggcactgtctactgtgacacatgttttcaacaagctttctctctaaacagccacttcat |
197 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5684263 |
tccttcacctgttgtagttggcactgtctactgtgacacatgttttcaacaagctttctctctaaacagccacttcat |
5684340 |
T |
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