View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8469_high_25 (Length: 273)

Name: NF8469_high_25
Description: NF8469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8469_high_25
NF8469_high_25
[»] chr5 (45 HSPs)
chr5 (120-260)||(35679421-35679564)
chr5 (119-216)||(40148364-40148460)
chr5 (119-213)||(557141-557235)
chr5 (119-213)||(561913-562007)
chr5 (119-216)||(37248333-37248431)
chr5 (119-216)||(9726286-9726382)
chr5 (119-201)||(26667755-26667837)
chr5 (119-201)||(26939352-26939434)
chr5 (119-201)||(29167504-29167586)
chr5 (119-216)||(7452220-7452317)
chr5 (119-216)||(36941820-36941917)
chr5 (119-201)||(36424120-36424202)
chr5 (119-201)||(36429192-36429274)
chr5 (119-216)||(36937066-36937163)
chr5 (120-199)||(20180690-20180769)
chr5 (119-216)||(4872366-4872463)
chr5 (119-201)||(12103508-12103590)
chr5 (119-197)||(37549683-37549761)
chr5 (119-197)||(37652481-37652559)
chr5 (119-208)||(6513446-6513536)
chr5 (119-216)||(39518863-39518961)
chr5 (119-216)||(39523502-39523600)
chr5 (119-214)||(13301046-13301141)
chr5 (124-178)||(16115768-16115823)
chr5 (121-216)||(23757347-23757442)
chr5 (121-216)||(23822803-23822898)
chr5 (122-216)||(6154968-6155064)
chr5 (119-199)||(23688578-23688658)
chr5 (144-201)||(39518773-39518830)
chr5 (144-201)||(39523412-39523469)
chr5 (119-213)||(41997107-41997203)
chr5 (119-213)||(42001876-42001972)
chr5 (119-199)||(31731996-31732076)
chr5 (119-216)||(32461099-32461198)
chr5 (120-250)||(17158716-17158847)
chr5 (210-260)||(15414508-15414558)
chr5 (217-250)||(6513563-6513596)
chr5 (217-258)||(7452163-7452204)
chr5 (217-258)||(9726401-9726442)
chr5 (128-214)||(12044699-12044787)
chr5 (120-157)||(23977134-23977171)
chr5 (217-258)||(26667681-26667722)
chr5 (217-258)||(26939278-26939319)
chr5 (217-258)||(36424046-36424087)
chr5 (217-258)||(37549798-37549839)
[»] chr3 (47 HSPs)
chr3 (119-260)||(3419409-3419551)
chr3 (119-216)||(8888372-8888469)
chr3 (120-216)||(18472474-18472569)
chr3 (119-216)||(3034085-3034182)
chr3 (119-216)||(3693060-3693157)
chr3 (119-216)||(8070120-8070217)
chr3 (119-216)||(8883612-8883709)
chr3 (119-216)||(14438231-14438328)
chr3 (119-216)||(23660997-23661094)
chr3 (119-216)||(24037904-24038001)
chr3 (119-216)||(757897-757995)
chr3 (119-213)||(3673031-3673125)
chr3 (119-216)||(23665656-23665753)
chr3 (119-199)||(20520438-20520518)
chr3 (123-208)||(46964484-46964570)
chr3 (119-216)||(18467692-18467788)
chr3 (119-216)||(27709396-27709493)
chr3 (119-213)||(7570749-7570844)
chr3 (119-201)||(39775259-39775341)
chr3 (119-216)||(29350707-29350803)
chr3 (119-201)||(55326257-55326338)
chr3 (119-199)||(12965420-12965500)
chr3 (119-179)||(55431784-55431844)
chr3 (119-192)||(3656762-3656836)
chr3 (120-216)||(17025636-17025732)
chr3 (119-199)||(35456494-35456574)
chr3 (133-216)||(4662575-4662658)
chr3 (119-214)||(45904101-45904196)
chr3 (121-190)||(12112201-12112270)
chr3 (119-175)||(18699333-18699389)
chr3 (119-214)||(10585745-10585840)
chr3 (210-260)||(3656868-3656918)
chr3 (119-171)||(14671880-14671932)
chr3 (129-208)||(53358547-53358626)
chr3 (217-258)||(14438344-14438385)
chr3 (217-258)||(18467632-18467673)
chr3 (217-258)||(55326183-55326224)
chr3 (119-171)||(4106881-4106933)
chr3 (119-171)||(4110733-4110785)
chr3 (119-155)||(12899295-12899331)
chr3 (119-171)||(15965542-15965594)
chr3 (119-171)||(15969466-15969518)
chr3 (119-171)||(15973390-15973442)
chr3 (169-213)||(16983375-16983419)
chr3 (119-175)||(22758735-22758791)
chr3 (119-159)||(32473555-32473595)
chr3 (168-216)||(48431939-48431987)
[»] chr4 (63 HSPs)
chr4 (119-216)||(19540712-19540809)
chr4 (119-216)||(5270955-5271052)
chr4 (119-216)||(31728923-31729020)
chr4 (119-216)||(51698386-51698483)
chr4 (119-216)||(16421506-16421603)
chr4 (119-216)||(37259397-37259494)
chr4 (119-208)||(12823422-12823511)
chr4 (119-216)||(37264097-37264194)
chr4 (119-216)||(5927749-5927845)
chr4 (119-216)||(31269491-31269587)
chr4 (119-216)||(31273980-31274076)
chr4 (119-216)||(32081659-32081755)
chr4 (122-191)||(33462900-33462969)
chr4 (119-192)||(8029876-8029949)
chr4 (119-207)||(55252139-55252227)
chr4 (119-206)||(13059884-13059971)
chr4 (119-201)||(8694195-8694277)
chr4 (119-201)||(31766353-31766435)
chr4 (122-199)||(33468539-33468617)
chr4 (119-216)||(48276191-48276289)
chr4 (119-208)||(6943256-6943345)
chr4 (119-216)||(19107077-19107173)
chr4 (119-199)||(47244625-47244705)
chr4 (119-213)||(13059930-13060023)
chr4 (132-216)||(13065347-13065431)
chr4 (119-190)||(39216635-39216706)
chr4 (119-216)||(19102446-19102543)
chr4 (119-192)||(19906729-19906802)
chr4 (119-202)||(42758390-42758475)
chr4 (119-199)||(42316162-42316242)
chr4 (217-260)||(16421444-16421487)
chr4 (119-214)||(47575104-47575201)
chr4 (210-260)||(55252068-55252118)
chr4 (119-208)||(41817232-41817321)
chr4 (119-192)||(55150077-55150150)
chr4 (210-258)||(13059816-13059864)
chr4 (119-214)||(3997617-3997712)
chr4 (134-200)||(32221103-32221170)
chr4 (133-215)||(55081303-55081385)
chr4 (120-213)||(15805173-15805266)
chr4 (217-250)||(32081774-32081807)
chr4 (144-201)||(33463027-33463084)
chr4 (119-175)||(15011371-15011427)
chr4 (169-213)||(16595606-16595650)
chr4 (119-171)||(18023108-18023160)
chr4 (119-214)||(34560866-34560961)
chr4 (216-258)||(5927863-5927905)
chr4 (146-192)||(8536728-8536774)
chr4 (133-215)||(15020070-15020152)
chr4 (212-258)||(19102386-19102432)
chr4 (144-201)||(19906614-19906672)
chr4 (144-201)||(48276322-48276380)
chr4 (217-258)||(5271068-5271109)
chr4 (217-258)||(19540828-19540869)
chr4 (129-174)||(39320047-39320092)
chr4 (217-257)||(8694122-8694162)
chr4 (119-171)||(10713427-10713479)
chr4 (119-171)||(10927197-10927249)
chr4 (119-171)||(14953610-14953662)
chr4 (119-159)||(16948518-16948558)
chr4 (119-171)||(25690481-25690533)
chr4 (168-208)||(33722560-33722600)
chr4 (168-208)||(40684499-40684539)
[»] chr6 (34 HSPs)
chr6 (119-250)||(12405889-12406020)
chr6 (119-216)||(2699627-2699724)
chr6 (119-216)||(16835691-16835788)
chr6 (119-208)||(4156887-4156976)
chr6 (119-208)||(11570277-11570367)
chr6 (119-213)||(6407394-6407489)
chr6 (119-208)||(11559749-11559839)
chr6 (119-216)||(14509437-14509534)
chr6 (119-214)||(12689442-12689536)
chr6 (119-208)||(11428431-11428521)
chr6 (119-208)||(11534239-11534329)
chr6 (119-216)||(17964090-17964186)
chr6 (129-208)||(22694851-22694930)
chr6 (119-213)||(20747834-20747928)
chr6 (120-201)||(33687181-33687263)
chr6 (120-208)||(25313987-25314075)
chr6 (120-208)||(26201481-26201569)
chr6 (119-192)||(22610035-22610108)
chr6 (131-199)||(17914070-17914138)
chr6 (119-214)||(19994928-19995023)
chr6 (210-260)||(4156996-4157046)
chr6 (119-171)||(2077299-2077351)
chr6 (217-250)||(2699743-2699776)
chr6 (210-258)||(11559859-11559907)
chr6 (210-250)||(22694950-22694990)
chr6 (119-171)||(31477259-31477311)
chr6 (210-258)||(33687289-33687337)
chr6 (119-199)||(24588734-24588816)
chr6 (144-201)||(14509348-14509405)
chr6 (144-193)||(15991228-15991277)
chr6 (172-216)||(5856536-5856580)
chr6 (120-199)||(14575170-14575250)
chr6 (119-175)||(15704465-15704521)
chr6 (119-171)||(16760869-16760921)
[»] chr1 (42 HSPs)
chr1 (119-216)||(10140560-10140657)
chr1 (119-216)||(10135792-10135889)
chr1 (119-216)||(51041042-51041138)
chr1 (119-216)||(3094531-3094628)
chr1 (119-216)||(16649167-16649263)
chr1 (119-216)||(39200294-39200391)
chr1 (119-208)||(47450758-47450847)
chr1 (122-213)||(38621175-38621266)
chr1 (131-216)||(25844218-25844304)
chr1 (119-216)||(16833939-16834036)
chr1 (119-199)||(7882466-7882547)
chr1 (119-216)||(19798533-19798630)
chr1 (129-216)||(26927262-26927348)
chr1 (128-206)||(12260468-12260546)
chr1 (123-199)||(23192364-23192441)
chr1 (122-208)||(17214001-17214087)
chr1 (122-216)||(33300780-33300875)
chr1 (119-171)||(39587892-39587944)
chr1 (123-214)||(8267394-8267485)
chr1 (210-250)||(39200403-39200443)
chr1 (217-260)||(19798649-19798692)
chr1 (119-215)||(24159407-24159504)
chr1 (119-208)||(28434167-28434255)
chr1 (210-250)||(16036036-16036076)
chr1 (119-214)||(41097514-41097609)
chr1 (144-201)||(7882358-7882416)
chr1 (119-214)||(18784108-18784205)
chr1 (133-215)||(27761442-27761523)
chr1 (169-215)||(28857700-28857746)
chr1 (133-215)||(31064367-31064449)
chr1 (169-215)||(33380566-33380612)
chr1 (212-249)||(9328163-9328200)
chr1 (217-258)||(10135735-10135776)
chr1 (217-258)||(10140503-10140544)
chr1 (210-247)||(33300887-33300924)
chr1 (217-250)||(38621120-38621153)
chr1 (217-258)||(47450874-47450915)
chr1 (217-258)||(51041157-51041198)
chr1 (119-171)||(1924609-1924661)
chr1 (172-208)||(19319806-19319842)
chr1 (119-171)||(20923623-20923675)
chr1 (210-250)||(40166403-40166442)
[»] chr8 (42 HSPs)
chr8 (119-260)||(1910488-1910647)
chr8 (119-213)||(15951084-15951178)
chr8 (119-208)||(38181776-38181865)
chr8 (119-216)||(4237896-4237993)
chr8 (119-216)||(4242635-4242732)
chr8 (119-216)||(17020816-17020913)
chr8 (119-216)||(17551253-17551350)
chr8 (119-208)||(19167120-19167209)
chr8 (119-216)||(31449420-31449517)
chr8 (122-216)||(1807912-1808006)
chr8 (119-208)||(18875921-18876010)
chr8 (132-251)||(2966062-2966181)
chr8 (119-201)||(44925454-44925536)
chr8 (119-216)||(17026392-17026490)
chr8 (119-216)||(17556884-17556982)
chr8 (119-216)||(40125428-40125526)
chr8 (119-216)||(17953507-17953605)
chr8 (119-201)||(36684062-36684147)
chr8 (119-208)||(24672856-24672945)
chr8 (216-260)||(17020754-17020798)
chr8 (216-260)||(17551191-17551235)
chr8 (121-208)||(26779591-26779678)
chr8 (217-260)||(19167050-19167093)
chr8 (210-250)||(18876030-18876070)
chr8 (119-171)||(21387651-21387703)
chr8 (119-171)||(25733721-25733773)
chr8 (210-250)||(26779531-26779571)
chr8 (144-202)||(15875360-15875419)
chr8 (217-260)||(38181892-38181935)
chr8 (133-215)||(19954684-19954766)
chr8 (218-260)||(22714641-22714683)
chr8 (217-258)||(15951200-15951241)
chr8 (217-258)||(33416956-33416997)
chr8 (119-160)||(33417051-33417092)
chr8 (217-258)||(36683988-36684029)
chr8 (119-171)||(18862125-18862177)
chr8 (119-171)||(21384231-21384283)
chr8 (132-216)||(23548161-23548245)
chr8 (224-260)||(28559282-28559318)
chr8 (224-260)||(28564461-28564497)
chr8 (172-216)||(33417013-33417057)
chr8 (119-214)||(37772149-37772245)
[»] chr2 (31 HSPs)
chr2 (119-216)||(9184951-9185048)
chr2 (119-216)||(12797393-12797489)
chr2 (121-216)||(9180262-9180357)
chr2 (119-216)||(1934526-1934623)
chr2 (119-216)||(17968494-17968590)
chr2 (119-216)||(25496856-25496952)
chr2 (123-201)||(19892008-19892086)
chr2 (119-216)||(18344891-18344987)
chr2 (119-216)||(25477828-25477924)
chr2 (119-192)||(42926175-42926248)
chr2 (119-216)||(31327218-31327315)
chr2 (122-216)||(29678222-29678317)
chr2 (119-216)||(30651382-30651480)
chr2 (119-199)||(7737395-7737475)
chr2 (121-197)||(28855593-28855669)
chr2 (119-214)||(6297448-6297543)
chr2 (119-214)||(17453138-17453233)
chr2 (132-207)||(40847135-40847210)
chr2 (119-208)||(38591687-38591777)
chr2 (119-208)||(7735064-7735153)
chr2 (144-201)||(30651292-30651349)
chr2 (119-171)||(1284001-1284053)
chr2 (119-175)||(23068308-23068364)
chr2 (210-258)||(31327158-31327206)
chr2 (123-214)||(30643566-30643659)
chr2 (120-199)||(35602384-35602464)
chr2 (217-258)||(28603709-28603750)
chr2 (218-258)||(9185065-9185105)
chr2 (129-214)||(10160286-10160373)
chr2 (119-171)||(30344471-30344523)
chr2 (119-191)||(30619360-30619432)
[»] scaffold0054 (4 HSPs)
scaffold0054 (119-213)||(29643-29737)
scaffold0054 (119-216)||(25921-26018)
scaffold0054 (217-260)||(25859-25902)
scaffold0054 (228-260)||(29579-29611)
[»] scaffold0182 (1 HSPs)
scaffold0182 (119-216)||(9436-9533)
[»] chr7 (36 HSPs)
chr7 (119-221)||(2595283-2595386)
chr7 (119-201)||(26341689-26341771)
chr7 (119-214)||(42626121-42626215)
chr7 (120-216)||(4930687-4930782)
chr7 (120-208)||(8268768-8268857)
chr7 (119-201)||(44422670-44422752)
chr7 (119-216)||(4579964-4580061)
chr7 (131-208)||(19640751-19640828)
chr7 (119-201)||(12799866-12799949)
chr7 (119-216)||(16372863-16372960)
chr7 (119-216)||(30258567-30258664)
chr7 (119-214)||(27256680-27256775)
chr7 (129-216)||(3880445-3880532)
chr7 (119-206)||(26286676-26286763)
chr7 (119-214)||(40864920-40865015)
chr7 (119-208)||(10387886-10387975)
chr7 (119-171)||(16580716-16580768)
chr7 (119-178)||(13313817-13313876)
chr7 (119-244)||(15642684-15642809)
chr7 (120-201)||(21671676-21671757)
chr7 (133-215)||(6898003-6898084)
chr7 (119-175)||(14259489-14259545)
chr7 (119-171)||(16459936-16459988)
chr7 (119-171)||(18426414-18426466)
chr7 (119-171)||(20488435-20488487)
chr7 (119-171)||(45169486-45169538)
chr7 (122-214)||(23866515-23866609)
chr7 (119-153)||(10498597-10498631)
chr7 (119-173)||(10499739-10499793)
chr7 (119-153)||(10503626-10503660)
chr7 (119-173)||(10504768-10504822)
chr7 (119-153)||(13337210-13337244)
chr7 (119-153)||(44509929-44509963)
chr7 (217-258)||(8268700-8268741)
chr7 (119-171)||(20485074-20485126)
chr7 (210-250)||(21671612-21671652)
[»] scaffold0352 (2 HSPs)
scaffold0352 (119-216)||(7573-7669)
scaffold0352 (217-258)||(7513-7554)
[»] scaffold0002 (2 HSPs)
scaffold0002 (119-216)||(443476-443572)
scaffold0002 (119-216)||(4528-4626)
[»] scaffold0240 (1 HSPs)
scaffold0240 (119-216)||(4440-4536)
[»] scaffold0008 (1 HSPs)
scaffold0008 (119-192)||(256279-256352)
[»] scaffold0628 (1 HSPs)
scaffold0628 (119-183)||(6863-6927)
[»] scaffold0060 (2 HSPs)
scaffold0060 (119-199)||(47528-47608)
scaffold0060 (119-199)||(52472-52552)
[»] scaffold0009 (3 HSPs)
scaffold0009 (132-208)||(147936-148012)
scaffold0009 (131-177)||(148807-148853)
scaffold0009 (131-177)||(163987-164033)
[»] scaffold0045 (2 HSPs)
scaffold0045 (119-214)||(83496-83594)
scaffold0045 (119-199)||(81272-81354)
[»] scaffold0061 (1 HSPs)
scaffold0061 (119-192)||(49539-49612)
[»] scaffold0017 (1 HSPs)
scaffold0017 (119-192)||(149022-149095)
[»] scaffold0011 (2 HSPs)
scaffold0011 (119-216)||(145962-146059)
scaffold0011 (119-171)||(126890-126942)
[»] scaffold0292 (1 HSPs)
scaffold0292 (119-175)||(7650-7706)
[»] scaffold0018 (1 HSPs)
scaffold0018 (119-174)||(21791-21846)
[»] scaffold0096 (1 HSPs)
scaffold0096 (119-175)||(22192-22248)
[»] scaffold0031 (1 HSPs)
scaffold0031 (119-171)||(35566-35618)


Alignment Details
Target: chr5 (Bit Score: 98; Significance: 2e-48; HSPs: 45)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 120 - 260
Target Start/End: Original strand, 35679421 - 35679564
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaat---taagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||   |||||||| ||||||||||||||| |||||||    
T  35679421 tcccttcggaattaagagtgttctaaagaccatagtcccttttcggtttaatgtcccttcagaataattaagaatggtcttaaaaacatagtcccttcga 35679520  T
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||    
T  35679521 aataaatagtactattaaaatcatagtccctttttggaataata 35679564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 40148460 - 40148364
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  40148460 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatggtctt-aaaacatagtcccttcga 40148364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 557235 - 557141
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| ||||    
T  557235 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctt 557141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 562007 - 561913
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| |||||||| ||||    
T  562007 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagaacatagtccctt 561913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 37248333 - 37248431
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  37248333 gtcccttcggatttaagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcagaattaagaatgatcttaaaaacatagtcccttcga 37248431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9726286 - 9726382
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  9726286 gtcccttcggaattaagagtgttcttaagaccgtagtcccttttcggtttaatgtcccttcagaattaagaatggtctt-aaaacatagtcccttcga 9726382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 26667837 - 26667755
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26667837 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa 26667755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 26939434 - 26939352
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26939434 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa 26939352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 29167504 - 29167586
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  29167504 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa 29167586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 7452317 - 7452220
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||| ||| ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  7452317 gtcccttcggaaataagagttttcttaagaccattgtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 7452220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 36941820 - 36941917
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  36941820 gtcccttcggaattaagagtgttcttaagatcatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcga 36941917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 36424202 - 36424120
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||    
T  36424202 gtcccttcggaattaagactgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa 36424120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 36429274 - 36429192
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||    
T  36429274 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcgttttaatgtcccttcggaattaagaatggtcttaaaa 36429192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 36937066 - 36937163
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||||||||||  || |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  36937066 gtcccttcggaattaagagtaatcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcga 36937163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 120 - 199
Target Start/End: Original strand, 20180690 - 20180769
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    ||||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||    
T  20180690 tcccttcggaattaagagtgttcttaagaccatagtccctgttcggtttaatgtcccttcaaaattaagaatgatcttaa 20180769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4872463 - 4872366
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||  ||||||||| |||||| ||||||   |||||| |||||||    
T  4872463 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcttttcagaattcagaatgatcttaagttcatagtcccttcga 4872366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 12103590 - 12103508
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||| | |||||||||||| ||||||||||||||| |||||||||||||| ||||| ||||||||    
T  12103590 gtcccttcggaattaagagtgtacttaagaccatagttccttttcggtttaatatcccttcagaattacgaatgatcttaaaa 12103508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 37549683 - 37549761
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttctt 197  Q
    |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  37549683 gtccctttggaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt 37549761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 197
Target Start/End: Original strand, 37652481 - 37652559
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttctt 197  Q
    |||||||  ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||    
T  37652481 gtccctttggaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt 37652559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 6513446 - 6513536
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct-tttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||||||||||||||  |||||||| | | ||| ||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  6513446 gtcccttcagaattaagagtgttattaagaccacatttcctatttcggtttaatgtcccttcgaaattaagaatgatcttaaaaacatagt 6513536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 39518961 - 39518863
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||| |||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  39518961 gtcccttcggaataaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 39518863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 39523600 - 39523502
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||| |||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  39523600 gtcccttcggaataaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 39523502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 13301046 - 13301141
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  13301046 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 13301141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 124 - 178
Target Start/End: Original strand, 16115768 - 16115823
Alignment:
Q  124 ttcagaattaagagtgttcgtaagaccatagtcccttttcggtt-taatgtccctt 178  Q
    ||||||||||||||||||| |||||||||| ||||||||||||| |||||||||||    
T  16115768 ttcagaattaagagtgttcttaagaccataatcccttttcggttataatgtccctt 16115823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 23757347 - 23757442
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||| ||| ||||||| ||| ||||||| |||||||  |||||| ||||||| |||| |||||| ||| | ||||||||||||||| |||||||    
T  23757347 cccttcggaaataagagttttcttaagaccttagtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcga 23757442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 23822803 - 23822898
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||| ||| ||||||| ||| ||||||| |||||||  |||||| ||||||| |||| |||||| ||| | ||||||||||||||| |||||||    
T  23822803 cccttcggaaataagagttttcttaagaccttagtcccaattcggtataatgtcacttcggaattatgaaaggtcttaaaaacatagtcccttcga 23822898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 6154968 - 6155064
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||| ||||||||||||||| |||||||  |||||||||| |||||||| ||  |||||||||| || |||| |||||| | |||||| |||||||    
T  6154968 ccttcggaattaagagtgttcttaagaccatatagtcccttgtcggtttattgatccttcagaatcaataatggtcttaagagcatagtcccttcga 6155064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 23688658 - 23688578
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    ||||||||  ||||||||| |||| |||||||||||  |||||||||| |||||||| | | |||||||||||| ||||||    
T  23688658 gtcccttcgaaattaagagagttcttaagaccatagaaccttttcggtataatgtccgtccggaattaagaatggtcttaa 23688578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 39518830 - 39518773
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||||||| ||||||||||||| || || ||||| ||||||||    
T  39518830 taagatcatagtcccttttcggtataatgtcccttcaaaaatatgaatgatcttaaaa 39518773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 39523469 - 39523412
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||||||| ||||||||||||| || || ||||| ||||||||    
T  39523469 taagatcatagtcccttttcggtataatgtcccttcaaaaatatgaatgatcttaaaa 39523412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 41997203 - 41997107
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||  |||||||||| |||||||| ||  | ||| |||| || |||| |||||| |||||||| ||||    
T  41997203 gtcccttcggaattaagagtgttcttaagaccatatagtcccttgtcggtttattgatcattcggaatcaataatggtcttaagaacatagtccctt 41997107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 42001972 - 42001876
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||  |||||||||| |||||||| ||  | ||| |||| || |||| |||||| |||||||| ||||    
T  42001972 gtcccttcggaattaagagtgttcttaagaccatatagtcccttgtcggtttattgatcattcggaatcaataatggtcttaagaacatagtccctt 42001876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 31732076 - 31731996
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| ||||||||||||||| |||||||||||||| |    |||||| | ||| ||||||| |||||||| ||||||    
T  31732076 gtcccttcggaattaagagtgttcttaagaccatagtccatcgctggtttattatcctttcagaaataagaatggtcttaa 31731996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 32461099 - 32461198
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||| ||| |||||||  |||||||||| |||||||| ||  ||||| |||| || |||| |||||| | |||||| |||||||    
T  32461099 gtcccttcggaattaagagtattcttaagaccatatagtcccttgtcggtttattgatccttcggaatcaataatggtcttaagagcatagtcccttcga 32461198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 120 - 250
Target Start/End: Complemental strand, 17158847 - 17158716
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtt-taatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaaa 218  Q
    |||||||| ||||||||| |||| |||||  ||| |||||||   | | |||||| | ||| |||||||||||| |||||| | ||||||  ||| ||||    
T  17158847 tcccttcaaaattaagagcgttcttaagataataatccctttcgagatataatgttcgttcggaattaagaatgatcttaagagcatagtctctttgaaa 17158748  T
Q  219 taaagagtactattaagatcatagtccctttt 250  Q
    ||||||||| | ||||||| ||||||| ||||    
T  17158747 taaagagtatttttaagattatagtccatttt 17158716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 15414508 - 15414558
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    ||||| ||||||||||||||  |||||||||||| ||||||| ||||||||    
T  15414508 ccttcaaaataaagagtacttgtaagatcatagttcctttttggaataata 15414558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 6513563 - 6513596
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttt 250  Q
    |||||||||| |||||||||||||||||||||||    
T  6513563 aataaagagtgctattaagatcatagtccctttt 6513596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 7452204 - 7452163
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  7452204 aataaagagtacttttaagatcatagtccctatttggaataa 7452163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 9726401 - 9726442
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  9726401 aataaagagtacttttaagatcatagtccctatttggaataa 9726442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 128 - 214
Target Start/End: Original strand, 12044699 - 12044787
Alignment:
Q  128 gaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    ||||||||||||||| |||||||  |||||||||| ||| | || ||||||||| |||| ||||||| || ||| | |||||| |||||    
T  12044699 gaattaagagtgttcttaagaccatatagtcccttgtcgatatattgtcccttcggaatcaagaatggtcataagagcatagtcccttc 12044787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 120 - 157
Target Start/End: Original strand, 23977134 - 23977171
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcc 157  Q
    ||||||| ||||||||||||||| ||||||||||||||    
T  23977134 tcccttcggaattaagagtgttcttaagaccatagtcc 23977171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 26667722 - 26667681
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  26667722 aataaagagtacttttaagatcatagtccctatttggaataa 26667681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 26939319 - 26939278
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  26939319 aataaagagtacttttaagatcatagtccctatttggaataa 26939278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 36424087 - 36424046
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  36424087 aataaagagtacttttaagatcatagtccctatttggaataa 36424046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 37549798 - 37549839
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  37549798 aataaagagtacttttaagatcatagtccctatttggaataa 37549839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 95; Significance: 2e-46; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 119 - 260
Target Start/End: Complemental strand, 3419551 - 3419409
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaa 217  Q
    |||||||| |||||||| |||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||| | |||| |    
T  3419551 gtcccttcggaattaagggtgttcttaagaccatagtccctttttcggtttaatgttccttcggaattaagaatggtcttaaaaacatagtcctttcgga 3419452  T
Q  218 ataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  3419451 ataaagagtattattaagatcatagtccctttttagaataata 3419409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 8888469 - 8888372
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  8888469 gtcccttcagaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaagagcatagtcccttcga 8888372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 18472569 - 18472474
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  18472569 tcccttcagaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatggtctt-aaaacatagtcccttcga 18472474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3034182 - 3034085
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  3034182 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcga 3034085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3693157 - 3693060
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  3693157 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcga 3693060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 8070217 - 8070120
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  8070217 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtcccttcga 8070120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 8883709 - 8883612
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||| | ||||||||||||||    
T  8883709 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaaaaatggtcttaagagcatagtaccttcga 8883612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 14438231 - 14438328
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  14438231 gtcccttcggaaataagagtattcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 14438328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 23660997 - 23661094
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  23660997 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 23661094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 24037904 - 24038001
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  24037904 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 24038001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 757897 - 757995
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  757897 gtcccttcggatttaagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 757995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 3673125 - 3673031
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| ||||    
T  3673125 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaacagcatagtccctt 3673031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 23665656 - 23665753
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| ||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  23665656 gtcccttcggatttaagagtgttcttaagaccatagtcgctttttggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 23665753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 20520518 - 20520438
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  20520518 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaa 20520438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 208
Target Start/End: Complemental strand, 46964570 - 46964484
Alignment:
Q  123 cttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||||||||||||| |||||||||||||||    
T  46964570 cttcggaattaagagtgttcttaagaccatagtccctttttcggtttaatgtccctttagaattaagaatggtcttaaaaacatagt 46964484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 18467788 - 18467692
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  18467788 gtcccttcggaaataagagtgttcttaagatcatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 18467692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 27709493 - 27709396
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||||||| |||||||||||| |||||| ||||||||||| |||| |||||||||||| ||||||||||||||| |||||||    
T  27709493 gtcccttcgaaattaagagtgttcttaagaccatagttcctttttggtttaatgtctcttcggaattaagaatggtcttaaaaacatagtcccttcga 27709396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 7570749 - 7570844
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| || |||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||| ||||    
T  7570749 gtcccttcggatttaagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtccctt 7570844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 39775259 - 39775341
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||  ||||||||||||||||||| |||||||||||||||| |||||||||||| ||||||||    
T  39775259 gtcccttcggaattaagagtgttattaagaccatagtcccttttgggtttaatgtcccttcggaattaagaatggtcttaaaa 39775341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 29350803 - 29350707
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||||||| ||||| |||||||||||||||||||||||||||||  ||||||| |||| |||| |||||||||| |||||||    
T  29350803 gtcccttcgaaattaagagtgttcttaagatcatagtcccttttcggtttaatgtccctttggaattaataatggtctt-aaaacatagtcccttcga 29350707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 55326338 - 55326257
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| ||||||||||||| |||||||||| ||||| ||||| |||||||||||| ||||||||    
T  55326338 gtcccttcggaattaagagtgttcttaagaccatagtcgcttttcggttgaatgt-ccttcggaattaagaatggtcttaaaa 55326257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 12965420 - 12965500
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| ||||||||| |||||  ||||||||| |||||||||||||||||||||||||  ||||||||||| ||||||    
T  12965420 gtcccttcggaattaagaatgttctgaagaccatactcccttttcggtttaatgtcccttcgaaattaagaatggtcttaa 12965500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 179
Target Start/End: Complemental strand, 55431844 - 55431784
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttc 179  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||    
T  55431844 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtaccttc 55431784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 3656762 - 3656836
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccc-ttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||| ||||||||||||||| ||||||||||||||| |||||||||||||||||||||  |||| ||||||    
T  3656762 gtcccttcggaattaagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcgaaattcagaatg 3656836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 120 - 216
Target Start/End: Original strand, 17025636 - 17025732
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||| |||||||||||| ||||||| | |||| | |||||| || | |||||||  ||||||||| |||||||| |||||||| |||||||    
T  17025636 tcccttcagatttaagagtgttcttaagaccttcgtccatgttcggtatattatcccttcgaaattaagaaagttcttaagaacatagttccttcga 17025732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 35456494 - 35456574
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| |||||| |||||||| ||||||| || | ||| |||||| |||||||||||| |||||||||||| ||||||    
T  35456494 gtcccttcggaattatgagtgttcttaagaccttaattcctattcggtataatgtcccttcggaattaagaatggtcttaa 35456574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 133 - 216
Target Start/End: Complemental strand, 4662658 - 4662575
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggtttaa--tgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||| |||| ||||||||||||  ||||||||  ||||||||| |||||||||||| |||||| |||||||| |||||||    
T  4662658 aagagtgttcttaaggccatagtccctt--cggtttaaaatgtcccttcggaattaagaatggtcttaagaacatagtcccttcga 4662575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 45904101 - 45904196
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  45904101 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttactatcctttcggaaataagaatggtcttaagagcatagtcccttc 45904196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 121 - 190
Target Start/End: Original strand, 12112201 - 12112270
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaa 190  Q
    ||||||| || ||||||| ||||||||||| || ||||| |||||  |||||||||||||||||||||||    
T  12112201 cccttcaaaaataagagtattcgtaagaccttaatccctattcggaataatgtcccttcagaattaagaa 12112270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 18699333 - 18699389
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||||||||||| |||||||||| ||||| ||| |||||||||||    
T  18699333 gtcccttcggaattaagagtgttcttaagaccataatccctcttctgtttaatgtcc 18699389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 10585745 - 10585840
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||  |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  10585745 gtcccttcggaattaagagtgtttttaagaccatagtccatcatcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 10585840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 3656868 - 3656918
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||| ||||||||||||| ||||||||||| ||||||||| ||||||||    
T  3656868 ccttcgtaataaagagtactgttaagatcataatccctttttggaataata 3656918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 14671932 - 14671880
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  14671932 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 14671880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 53358626 - 53358547
Alignment:
Q  129 aattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||||  ||||| |||||||| ||||||||||| ||||| |||  || |||||||| |||||| | ||||||    
T  53358626 aattaagagtgttattaagatcatagtcctttttcggtttattgtcctttcgcaactaagaatggtcttaagagcatagt 53358547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 14438344 - 14438385
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  14438344 aataaagagtacttttaagatcatagtccctatttggaataa 14438385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 18467673 - 18467632
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  18467673 aataaagagtacttttaagatcatagtccctatttggaataa 18467632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 55326224 - 55326183
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  55326224 aataaagagtacttttaagatcatagtccctatttggaataa 55326183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 4106881 - 4106933
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  4106881 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 4106933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 4110733 - 4110785
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  4110733 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 4110785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 155
Target Start/End: Original strand, 12899295 - 12899331
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagt 155  Q
    |||||||| ||||||||||||||| ||||||||||||    
T  12899295 gtcccttcggaattaagagtgttcataagaccatagt 12899331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 15965594 - 15965542
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  15965594 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 15965542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 15969518 - 15969466
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  15969518 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 15969466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 15973442 - 15973390
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  15973442 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 15973390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 169 - 213
Target Start/End: Complemental strand, 16983419 - 16983375
Alignment:
Q  169 aatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    ||||||||||| |||||||||||| |||||| |||||||| ||||    
T  16983419 aatgtcccttcggaattaagaatggtcttaagaacatagtccctt 16983375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 22758735 - 22758791
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    ||||||||  |||||||||||||| |||||||||| || || ||| |||||||||||    
T  22758735 gtcccttcgaaattaagagtgttcttaagaccataatctctcttctgtttaatgtcc 22758791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Original strand, 32473555 - 32473595
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct 159  Q
    |||||||| ||||||||||||||| ||||||||| ||||||    
T  32473555 gtcccttcggaattaagagtgttcttaagaccatggtccct 32473595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 216
Target Start/End: Original strand, 48431939 - 48431987
Alignment:
Q  168 taatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||||  ||||||||||| |||||| |||||||| |||||||    
T  48431939 taatgtcccttcgaaattaagaatggtcttaagaacatagtcccttcga 48431987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 78; Significance: 2e-36; HSPs: 63)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19540712 - 19540809
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  19540712 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 19540809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 5270955 - 5271052
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  5270955 gtcccttcggaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 5271052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 31728923 - 31729020
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  31728923 gtcccttcggaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttctgaattaagaatggtcttaaaaacatagtcccttcga 31729020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 51698483 - 51698386
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  51698483 gtcccttcggaattaagagtgttcttaagacaatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 51698386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 16421603 - 16421506
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||| ||||||||||||||| ||||||||||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  16421603 gtccattcggaattaagagtgttcttaagaccatagtcccttctcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 16421506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 37259397 - 37259494
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  37259397 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 37259494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 12823422 - 12823511
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||| |||| |||||||||||||||    
T  12823422 gtcccttcggaattaagagtgttcttaagaccataatcccttttcagtttaatgtcccttcagaattaaaaatggtcttaaaaacatagt 12823511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 37264097 - 37264194
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||| ||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  37264097 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcagtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 37264194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 5927749 - 5927845
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  5927749 gtccattcggaattaaaagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 5927845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31269587 - 31269491
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  31269587 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 31269491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31274076 - 31273980
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  31274076 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 31273980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 32081659 - 32081755
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||||||| ||| |||||||||||||||||||||||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  32081659 gtcccttcgaaattaagagtgttcttaa-accatagtcccttttcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttcga 32081755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 122 - 191
Target Start/End: Original strand, 33462900 - 33462969
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaat 191  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33462900 ccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaat 33462969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 8029876 - 8029949
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    ||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  8029876 gtcccttcgaaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatg 8029949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 119 - 207
Target Start/End: Complemental strand, 55252227 - 55252139
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatag 207  Q
    |||||||| ||||||||||||||| |||||||||||||| || ||||||||||||||||||  ||||| ||||| ||||||||||||||    
T  55252227 gtcccttcggaattaagagtgttcttaagaccatagtccattctcggtttaatgtcccttcgaaattaggaatggtcttaaaaacatag 55252139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 206
Target Start/End: Complemental strand, 13059971 - 13059884
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacata 206  Q
    |||||||||||||||| ||||||| |||||||||||||||||||||||||||   |||||  |||||||||||| |||||||||||||    
T  13059971 gtcccttcagaattaaaagtgttcttaagaccatagtcccttttcggtttaacaccccttgggaattaagaatggtcttaaaaacata 13059884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 8694277 - 8694195
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| | |||||||||||||  |||||||||||| ||||||||    
T  8694277 gtcccttcggaattaagagtgttcttaagaccatagtccctttttgatttaatgtccctttggaattaagaatggtcttaaaa 8694195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 31766435 - 31766353
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||| ||| ||||||||||| ||| |||||||||||||||||||| ||||||||||||||| |||||||||||| ||||||||    
T  31766435 gtcctttcggaattaagagtattcttaagaccatagtcccttttcagtttaatgtcccttcggaattaagaatggtcttaaaa 31766353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 122 - 199
Target Start/End: Original strand, 33468539 - 33468617
Alignment:
Q  122 ccttcagaattaagagtgttcgtaa-gaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    ||||| ||||||||||||||| ||| |||||||||||||||||||||||||||||||| ||||||||||||| ||||||    
T  33468539 ccttcggaattaagagtgttcttaaagaccatagtcccttttcggtttaatgtccctttagaattaagaatggtcttaa 33468617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 48276191 - 48276289
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttta-atgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||| ||||||||||||||||||| |||||||||  |||||||||||| |||||||  |||||| |||||||    
T  48276191 gtcccttcggaattaagagtgttcttaagactatagtcccttttcggtttagatgtccctttggaattaagaatggtcttaaattcatagtcccttcga 48276289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 6943345 - 6943256
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| ||||||| |||||| | |||||| ||||||||||||||||||||||| | ||||||||| |||||    
T  6943345 gtcccttcggaattaagagtgttcttaagaccttagtccatattcggtataatgtcccttcagaattaagaaaggtcttaaaaaaatagt 6943256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 19107173 - 19107077
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||| ||| |||||||||||| |||||||||||||||||||||||  ||||||||||| |||| |||||||||| |||||||    
T  19107173 gtcccttcggacttaagagtattcttaagaccatagttccttttcggtttaatgtcccttcgaaattaagaatggtctt-aaaacatagtcccttcga 19107077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 47244705 - 47244625
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    ||||||||  |||||||||||||| |||||| ||||| ||||||||||||||||||||||| |||||||||||| ||||||    
T  47244705 gtcccttcgaaattaagagtgttcttaagactatagttccttttcggtttaatgtcccttcggaattaagaatgatcttaa 47244625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 13060023 - 13059930
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| |||||||||||| || ||||||||||||||||||||||||| | |||||||||||||||| | ||||||||| | |||||| ||||    
T  13060023 gtcccttcggaattaagagtgatcttaagaccatagtcccttttcggttt-acgtcccttcagaattaaaagtgttcttaagaccatagtccctt 13059930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 13065347 - 13065431
Alignment:
Q  132 taagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||| ||||||| |||||||| |||||  |||||||||||| |||||||||| | ||||||||||||||  |||||||    
T  13065347 taagagtgttcttaagaccttagtccctattcggcataatgtcccttcggaattaagaaaggtcttaaaaacatagccccttcga 13065431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 190
Target Start/End: Original strand, 39216635 - 39216706
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaa 190  Q
    ||||||||| ||| |||||||||| |||||||||||||||| |||||| ||||||||||||  |||||||||    
T  39216635 gtcccttcaaaatcaagagtgttcttaagaccatagtccctattcggtataatgtcccttcgaaattaagaa 39216706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 19102543 - 19102446
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaag-aatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||||||| |||||||  || |||||| ||||||||||||||||||||||||| ||| |||||||| |||| |||| |||||||||| |||||||    
T  19102543 gtcctttcagaagtaagagtaatcttaagactatagtcccttttcggtttaatgtccattcggaattaagaaatggtctt-aaaacatagtcccttcga 19102446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 19906802 - 19906729
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    ||||||||  |||||| ||||||| ||||| ||||||||||||| |||||||||| ||||| ||||||||||||    
T  19906802 gtcccttcgaaattaatagtgttcttaagatcatagtccctttttggtttaatgttccttcggaattaagaatg 19906729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 42758390 - 42758475
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcc-cttttcggtttaatgtcccttc-agaattaagaatgttcttaaaaa 202  Q
    |||||||| ||||||||||||||| ||||||||||||||  |||||||| |||||||||||| | ||||||||| | |||||||||    
T  42758390 gtcccttcggaattaagagtgttcttaagaccatagtccatttttcggtataatgtcccttcgaaaattaagaacgatcttaaaaa 42758475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 42316162 - 42316242
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||||||||||||||||||  | ||||| |||| ||| |||||| ||||||||||||  ||||||||||| ||||||    
T  42316162 gtcccttcagaattaagagtgttattgagaccttagttcctattcggtataatgtcccttcgaaattaagaatggtcttaa 42316242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 16421487 - 16421444
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    ||||||||||||||||||||||||||||||||||| ||||||||    
T  16421487 aataaagagtactattaagatcatagtccctttttggaataata 16421444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 47575201 - 47575104
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccata--gtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    ||||||||  |||||||||||||| ||||||||||  ||||||| ||| | || |||||||||||||| ||||||| |||||| | |||||| |||||    
T  47575201 gtcccttcgaaattaagagtgttcttaagaccatatagtcccttgtcgatatattgtcccttcagaatcaagaatggtcttaagagcatagtcccttc 47575104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 260
Target Start/End: Complemental strand, 55252118 - 55252068
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||| |||||||| |||||||||||||||||||||||||| ||||||||    
T  55252118 ccttcggaataaagaatactattaagatcatagtccctttttggaataata 55252068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 41817321 - 41817232
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||||||| | ||||||||| | ||| |||  || |||||||| |||||| | ||||||    
T  41817321 gtcccttcggaattaagagtgttcttaagaccatagtccatcttcggtttattatcctttcgaaaataagaatggtcttaagagcatagt 41817232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 55150150 - 55150077
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    ||||||||  |||||||||||||| ||| | ||||||||||||| ||| |||||||||||||  ||||||||||    
T  55150150 gtcccttcgaaattaagagtgttcttaatatcatagtccctttttggtataatgtcccttcatgattaagaatg 55150077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 13059864 - 13059816
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||| ||||||||||||||| ||||||||||||||||| ||||||||||    
T  13059864 cctttgaaataaagagtacttttaagatcatagtccctatttagaataa 13059816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 3997617 - 3997712
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||| ||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  3997617 gtcccttcggaattaagagtgttcttaagactatagtccatcatcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 3997712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 200
Target Start/End: Original strand, 32221103 - 32221170
Alignment:
Q  134 agagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaa 200  Q
    ||||||||| ||||||||||||| ||||| ||||||||| ||| ||| |||||||||||| |||||||    
T  32221103 agagtgttcttaagaccatagtctctttttcggtttaatctccattcggaattaagaatggtcttaaa 32221170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 55081303 - 55081385
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggttta--atgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||||||||| |||| ||||||||||||  |||||||  | ||| ||||||||||||||||| |||||| |||||||| ||||||    
T  55081303 aagagtgttcttaaggccatagtccctt--cggtttataacgtctcttcagaattaagaatggtcttaagaacatagtcccttcg 55081385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 213
Target Start/End: Original strand, 15805173 - 15805266
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||||||||| || ||||| ||||||| |  || || |||||| |||||||||||| |||||||||||  |||||| | |||||| ||||    
T  15805173 tcccttcagaattatgactgttcttaagacctttatctctattcggtataatgtcccttcggaattaagaataatcttaatagcatagtccctt 15805266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 32081774 - 32081807
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  32081774 aataaagagtactattaagatcatagtccctttt 32081807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 33463027 - 33463084
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| |||||||||||||| || ||||||||||||| ||||| ||||| ||||||||    
T  33463027 taagatcatagtcccttttcagtataatgtcccttcaaaattatgaatgatcttaaaa 33463084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15011371 - 15011427
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||||||||||| |||||||||| ||||| |||  ||||||||||    
T  15011371 gtcccttcggaattaagagtgttcttaagaccataatccctcttctatttaatgtcc 15011427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 169 - 213
Target Start/End: Original strand, 16595606 - 16595650
Alignment:
Q  169 aatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||||||||||||||||||| |||||| |||||||| ||||    
T  16595606 aatgtcccttcagaattaagaatggtcttaagaacatagtccctt 16595650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 18023160 - 18023108
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  18023160 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 18023108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 34560961 - 34560866
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||| | | |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  34560961 gtcccttcggaattaagagtgttcttaagaccataattcatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 34560866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 216 - 258
Target Start/End: Original strand, 5927863 - 5927905
Alignment:
Q  216 aaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||||||||||||| ||||||||||||||||| ||| ||||||    
T  5927863 aaataaagagtacttttaagatcatagtccctatttggaataa 5927905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 192
Target Start/End: Complemental strand, 8536774 - 8536728
Alignment:
Q  146 agaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||||| |||||| ||| |||||||| ||||||||||||||||    
T  8536774 agaccatagtacctttttggtataatgtccattcagaattaagaatg 8536728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 15020070 - 15020152
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||| ||||| ||||||||||||||||||  | | |||||||| |||| ||||||| ||| |||||| | |||||| ||||||    
T  15020070 aagaatgttcttaagaccatagtccctttgagatataatgtccattcaaaattaaggatggtcttaagagcatagtcccttcg 15020152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 212 - 258
Target Start/End: Complemental strand, 19102432 - 19102386
Alignment:
Q  212 ttcgaaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||||||||||||||||| |||||||||| |||||| ||| ||||||    
T  19102432 ttcgaaataaagagtacttttaagatcattgtccctatttggaataa 19102386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 19906672 - 19906614
Alignment:
Q  144 taagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||    
T  19906672 taagatcatagtccctttttcggtataatgtcccttcaaaattatgaatgatcttaaaa 19906614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Original strand, 48276322 - 48276380
Alignment:
Q  144 taagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||| |||| ||||||||||||| ||||| ||||| ||||||||    
T  48276322 taagatcatagtccctttttcggtgtaatgtcccttcaaaattatgaatgatcttaaaa 48276380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 5271068 - 5271109
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  5271068 aataaagagtacttttaagatcatagtccctatttggaataa 5271109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 19540828 - 19540869
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  19540828 aataaagagtacttttaagatcatagtccctatttggaataa 19540869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 39320092 - 39320047
Alignment:
Q  129 aattaagagtgttcgtaagaccatagtcccttttcggtttaatgtc 174  Q
    |||||||||||||| ||||| ||||||| |||||||||||| ||||    
T  39320092 aattaagagtgttcttaagatcatagtctcttttcggtttattgtc 39320047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 217 - 257
Target Start/End: Complemental strand, 8694162 - 8694122
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaata 257  Q
    ||||||||||||| ||||||||||||||||| ||| |||||    
T  8694162 aataaagagtacttttaagatcatagtccctatttggaata 8694122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 10713479 - 10713427
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    ||||||||  |||||| ||||||| |||||||||| ||||| |||||||||||    
T  10713479 gtcccttcgaaattaaaagtgttcttaagaccataatccctcttcggtttaat 10713427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 10927249 - 10927197
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    ||||||||  |||||| ||||||| |||||||||| ||||| |||||||||||    
T  10927249 gtcccttcgaaattaaaagtgttcttaagaccataatccctcttcggtttaat 10927197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 14953610 - 14953662
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  14953610 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 14953662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 159
Target Start/End: Complemental strand, 16948558 - 16948518
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct 159  Q
    |||||||| ||||||||||||||| ||||| ||||||||||    
T  16948558 gtcccttcggaattaagagtgttcttaagatcatagtccct 16948518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 25690533 - 25690481
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  25690533 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 25690481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 33722560 - 33722600
Alignment:
Q  168 taatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||| |||||||||||| |||||| ||||||||    
T  33722560 taatgtcccttcggaattaagaatggtcttaagaacatagt 33722600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 208
Target Start/End: Original strand, 40684499 - 40684539
Alignment:
Q  168 taatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||||||| ||||||||||||| |||||| ||||||||    
T  40684499 taatgtccctttagaattaagaatggtcttaagaacatagt 40684539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 76; Significance: 3e-35; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 119 - 250
Target Start/End: Original strand, 12405889 - 12406020
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaaa 218  Q
    |||||||| ||| ||||||||||| ||||||| |||||||| |||||| |||||||||||||||||||||||   |||||||||| |||| | |||||||    
T  12405889 gtcccttcggaaataagagtgttcttaagaccttagtccctattcggtataatgtcccttcagaattaagaaaagtcttaaaaacgtagtcctttcgaaa 12405988  T
Q  219 taaagagtactattaagatcatagtccctttt 250  Q
    ||||||||| | ||||||||||||||||||||    
T  12405989 taaagagtatttttaagatcatagtccctttt 12406020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 2699627 - 2699724
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||    
T  2699627 gtcccttcggaattaagagtgttcttaaaaccatagtcccttttcggtttaatgtcccttcagaattaagaataatcttaaaaacatagtcccttcga 2699724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 16835691 - 16835788
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  16835691 gtcccttcggatttaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 16835788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 4156887 - 4156976
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||| ||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  4156887 gtcccttcggaattaagattgttcttaagaccatagtcctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagt 4156976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 11570277 - 11570367
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct-tttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||| |||||||||||||| |||||||||||| |||||||||||||||    
T  11570277 gtcccttcggaattaagagtgttcttaagaccatagtccctctttcgatttaatgtcccttcggaattaagaatggtcttaaaaacatagt 11570367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 6407394 - 6407489
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| || |||||||||||| ||||||||||||||||||| ||||||||||| ||||| |||||||||||| ||||||||||||||| ||||    
T  6407394 gtcccttcggatttaagagtgttcttaagaccatagtccctttttcggtttaatgttccttcggaattaagaatggtcttaaaaacatagtccctt 6407489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 11559749 - 11559839
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct-tttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||  |||||||||||||| |||||||||||| |||||||||||||||    
T  11559749 gtcccttcggaattaagagtgttcttaagaccatagtccctctttcaatttaatgtcccttcggaattaagaatggtcttaaaaacatagt 11559839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 14509534 - 14509437
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||  ||||||   |||||| |||||||    
T  14509534 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcagtttaatgtaccttcagaattaagaatagtcttaagttcatagtcccttcga 14509437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 12689536 - 12689442
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||  |||||||||||||| |||||||||||| |||||||| |||||||||||| |||| |||||||||| |||||    
T  12689536 gtcccttcggaattaagagtgtttttaagaccatagtccattttcggtttaacgtcccttcggaattaagaatggtctt-aaaacatagtcccttc 12689442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 11428521 - 11428431
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||| ||||||||| ||||||||||||||||||| ||||||||||| ||||| ||||||| |||| |||||||||||||||    
T  11428521 gtcccttccgaattgagagtgttcttaagaccatagtccctttttcggtttaatgttccttcggaattaataatgatcttaaaaacatagt 11428431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 11534239 - 11534329
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct-tttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||||||||| ||||  |||||||||||||| ||||||| |||| |||||||||||||||    
T  11534239 gtcccttcggaattaagagtgttcttaagaccatagtccctctttcaatttaatgtcccttcggaattaaaaatggtcttaaaaacatagt 11534329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17964090 - 17964186
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||||| ||||||||  ||||||||||||| |||||| |||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  17964090 gtcccttcggaattatgagtgttctcaagaccatagtcctttttcgttttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 17964186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 22694851 - 22694930
Alignment:
Q  129 aattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||||| ||||||| |||||||| |||||| ||||||||||| ||||||||||| | |||||||||||||||    
T  22694851 aattaagagtgttcttaagaccttagtccctattcggtataatgtcccttaagaattaagaaaggtcttaaaaacatagt 22694930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 20747834 - 20747928
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    ||||||||  |||||||| ||||| ||||||||||||| |||| || | |||||||||||| |||||||||||| ||||||||||||||| ||||    
T  20747834 gtcccttcgaaattaagaatgttcttaagaccatagtctctttccgatataatgtcccttcggaattaagaatgatcttaaaaacatagtccctt 20747928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 120 - 201
Target Start/End: Original strand, 33687181 - 33687263
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtccc-ttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||||||||||||||||| ||| ||||||||||||||| |||||||||||||||||||||  ||||||| ||| ||||||||    
T  33687181 tcccttcagaattaagagtcttcttaagaccatagtccctttttcggtttaatgtcccttcgcaattaagtatggtcttaaaa 33687263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 25313987 - 25314075
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||| ||||||||||||||  |||||||||||||||||   ||||||||| |||||  |||||||||||| |||||||||||||||    
T  25313987 tcccttcggaattaagagtgtttttaagaccatagtcccttgctggtttaatgcccctttcgaattaagaatgatcttaaaaacatagt 25314075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 208
Target Start/End: Original strand, 26201481 - 26201569
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||| ||||||||||||||  |||||||||||||||||   ||||||||| |||||  |||||||||||| |||||||||||||||    
T  26201481 tcccttcggaattaagagtgtttttaagaccatagtcccttgctggtttaatgcccctttcgaattaagaatgatcttaaaaacatagt 26201569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 22610108 - 22610035
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||  ||||||||||||||| |||||||||| |||||||||||| ||||||| |||| ||||||||||||    
T  22610108 gtcccttaggaattaagagtgttcttaagaccataatcccttttcggtataatgtcacttcggaattaagaatg 22610035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 131 - 199
Target Start/End: Complemental strand, 17914138 - 17914070
Alignment:
Q  131 ttaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||||||| |||||||||||||| |||||| | |||||||||||| |||||||||||| ||||||    
T  17914138 ttaagagtgttcttaagaccatagtccattttcgatataatgtcccttcggaattaagaatggtcttaa 17914070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 19994928 - 19995023
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    ||||||||  || ||||||||||  ||||| | |||||||| ||| || ||||||||||||||||||||||| | | ||||||||||||| |||||    
T  19994928 gtcccttcgaaaataagagtgtttttaagatcttagtccctattcagtataatgtcccttcagaattaagaaaggttttaaaaacatagtcccttc 19995023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 210 - 260
Target Start/End: Original strand, 4156996 - 4157046
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||| ||||||||||| ||||||||||||| ||||||||||||||||||    
T  4156996 ccttcggaataaagagtattattaagatcataatccctttttagaataata 4157046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 2077351 - 2077299
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| |||||||||||||||||    
T  2077351 gtcccttcggaattaaaagtgttcttaagaccataatcccttttcggtttaat 2077299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 217 - 250
Target Start/End: Original strand, 2699743 - 2699776
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttt 250  Q
    ||||||||||||||||||||||||||||||||||    
T  2699743 aataaagagtactattaagatcatagtccctttt 2699776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 11559859 - 11559907
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| ||||||    
T  11559859 ccttcggaataaagagtacttttaagatcatagtccctatttggaataa 11559907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 22694950 - 22694990
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  22694950 ccttcggaataaagagtacttttaagatcatagtccctttt 22694990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 31477259 - 31477311
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  31477259 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 31477311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Original strand, 33687289 - 33687337
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||||| ||||||||||||| ||||||||||||||||| ||| ||||||    
T  33687289 ccttcggaataaagagtacttttaagatcatagtccctatttggaataa 33687337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 24588734 - 24588816
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||||||||||| ||||||  |||||||  ||||| | |||||||| || ||||||||| |||| ||||||| ||||||    
T  24588734 gtcccttcagaattaaaagtgtttttaagaccatatagttcattttcggtatattgtcccttcggaatcaagaatggtcttaa 24588816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 14509405 - 14509348
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||| ||||||||| ||||||||||||| ||||| ||||| | ||||||    
T  14509405 taagatcatagtctcttttcggtataatgtcccttcaaaattatgaatgatattaaaa 14509348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 144 - 193
Target Start/End: Original strand, 15991228 - 15991277
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgt 193  Q
    ||||||||||||| ||||||| |||| ||||| |||| ||||||||||||    
T  15991228 taagaccatagtctcttttcgatttattgtccattcaaaattaagaatgt 15991277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 5856580 - 5856536
Alignment:
Q  172 gtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||| |||||||||||||||||| |||||||    
T  5856580 gtcccttcgaaattaagagtgttcttaaaaacatagtcccttcga 5856536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 14575250 - 14575170
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtc-ccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||||| |||||||||||  ||||||||||||| | |||| | | || |||||||||| |||| |||||| ||||||    
T  14575250 tcccttcagacttaagagtgttgttaagaccatagtctctttttagatatagtgtcccttcaaaatttagaatggtcttaa 14575170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 15704465 - 15704521
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| |||| |||||||||| |||||||||| | ||| ||| |||||||||||    
T  15704465 gtcccttcggaatcaagagtgttcttaagaccataattcctcttctgtttaatgtcc 15704521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 16760921 - 16760869
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  16760921 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 16760869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 74; Significance: 5e-34; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 10140657 - 10140560
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  10140657 gtcccttcggaaataagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 10140560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 10135889 - 10135792
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  10135889 gtcccttcggaaataagagtattcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 10135792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 51041042 - 51041138
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  51041042 gtcccttcggaattaagagtattcttaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatggtctt-aaaacatagtcccttcga 51041138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 3094628 - 3094531
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| | |||||| |||||||    
T  3094628 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaacagcatagtcccttcga 3094531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 16649167 - 16649263
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||| |||||||    
T  16649167 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcgaaattaagaatggtctt-aaaacatagtcccttcga 16649263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 39200294 - 39200391
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||  ||||||||||||||| ||| ||||||||||||||| |||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  39200294 gtccctttggaattaagagtgttcttaataccatagtccctttttggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 39200391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 47450758 - 47450847
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| ||||||| ||||||||||| |||||||||||||||    
T  47450758 gtcccttcggaattaagagtgtttttaagaccatagtcccttttcggtttaatgccccttcaaaattaagaatggtcttaaaaacatagt 47450847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 122 - 213
Target Start/End: Complemental strand, 38621266 - 38621175
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||| |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||| ||||||||||||||| ||||    
T  38621266 ccttaagaattaagagtgttcttaagatcatagtcccttttcgttttaatgtcccttcagaattaataatgctcttaaaaacatagtccctt 38621175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 131 - 216
Target Start/End: Complemental strand, 25844304 - 25844218
Alignment:
Q  131 ttaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  25844304 ttaagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 25844218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 16834036 - 16833939
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  16834036 gtcccttcggaattaagagtgttcttaagaccatagtccctttccgatttaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 16833939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 7882547 - 7882466
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||  ||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||    
T  7882547 gtccctttggaattaagagtgttcttaagaccatagtccctttttcggtataatgtcccttcagaattaagaatggtcttaa 7882466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 19798533 - 19798630
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||||||| ||||||||||||||||||| | ||||||||||||||  ||||||||||| |||| |||||||| | |||||||    
T  19798533 gtcccttcgtaattaagagtgttcttaagaccatagtccctttttgatttaatgtcccttcgaaattaagaatggtcttcaaaacataatcccttcga 19798630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 129 - 216
Target Start/End: Original strand, 26927262 - 26927348
Alignment:
Q  129 aattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||  |||||||||||| |||| | |||||||| |||||||    
T  26927262 aattaagagtgttcttaagaccatagtcccttttcggtttaatatccctttggaattaagaatggtctt-acaacatagtcccttcga 26927348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 128 - 206
Target Start/End: Complemental strand, 12260546 - 12260468
Alignment:
Q  128 gaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacata 206  Q
    ||||||||||||||  |||||||||||||| |||||||| ||||||||||||||||||||| ||| |||||||| ||||    
T  12260546 gaattaagagtgtttttaagaccatagtccattttcggtataatgtcccttcagaattaaggatggtcttaaaagcata 12260468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 123 - 199
Target Start/End: Original strand, 23192364 - 23192441
Alignment:
Q  123 cttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaa 199  Q
    |||| ||||||||||||||| ||||||||||||||||||||||||| ||||||| ||| |||||||||||| ||||||    
T  23192364 cttcggaattaagagtgttcttaagaccatagtcccttttcggtttaaatgtccattcggaattaagaatggtcttaa 23192441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 122 - 208
Target Start/End: Original strand, 17214001 - 17214087
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||| ||||||||||||||| |||||||||||| ||||||||||||| ||||| ||| ||| |||||||| |||||| | ||||||    
T  17214001 ccttcggaattaagagtgttcttaagaccatagttccttttcggtttattgtcctttcggaactaagaatggtcttaacagcatagt 17214087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 33300780 - 33300875
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttc-ggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||| ||||||| ||||||| || ||||||||| ||||||  |||||||||||||||| ||| |||||| | ||||||||||||||| |||||||    
T  33300780 ccttcggaattaaaagtgttcttaggaccatagttccttttttggtttaatgtcccttcggaactaagaacggtcttaaaaacatagtcccttcga 33300875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 39587892 - 39587944
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||||||||||| |||||||||||||||||| |||||||||    
T  39587892 gtcccttcggaattaagagtgttcttaagaccatagtccctttccggtttaat 39587944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 123 - 214
Target Start/End: Original strand, 8267394 - 8267485
Alignment:
Q  123 cttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||||||||| ||||| |||||||||||||| | ||||||||| ||||| |||  || |||||||| |||||| | |||||| |||||    
T  8267394 cttcagaattaagaatgttcttaagaccatagtccttattcggtttattgtcctttcgaaaataagaatggtcttaagagcatagtcccttc 8267485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 39200403 - 39200443
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    ||||||||||||||||||||||||||||||| |||||||||    
T  39200403 ccttcgaaataaagagtactattaagatcattgtccctttt 39200443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 19798649 - 19798692
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||    
T  19798649 aataaagagtactatgaagatcatagtccctttttggaataata 19798692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 215
Target Start/End: Original strand, 24159407 - 24159504
Alignment:
Q  119 gtcccttcagaattaa-gagtgttcgtaagaccatagtcccttttcggtttaa--tgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    ||||||||||| |||| | |||||| |||| ||||||||||||  ||||||||  ||||||||| |||||||||| | |||||| |||||||| ||||||    
T  24159407 gtcccttcagatttaaagggtgttcttaaggccatagtccctt--cggtttaaaatgtcccttcggaattaagaacggtcttaagaacatagtcccttcg 24159504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 28434167 - 28434255
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||| ||| ||||| |||||| | |||| ||| |||| |||||||  ||||||||||| |||||||| ||||||    
T  28434167 gtcccttcggaattaagagttttcttaagaacatagt-cttttttggtataatctcccttcgaaattaagaatggtcttaaaagcatagt 28434255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 16036076 - 16036036
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    |||||||||||||||||||| |||||||||||||| |||||    
T  16036076 ccttcgaaataaagagtacttttaagatcatagtctctttt 16036036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 41097514 - 41097609
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||| ||| |  |||||||| | ||| ||  ||| |||||||| |||||| | |||||| |||||    
T  41097514 gtcccttcggaattaagagtgttcttaagaccataatccatcgtcggtttattatccttttggaaataagaatggtcttaagagcatagtcccttc 41097609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 7882416 - 7882358
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttc-agaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||||||| |||||||||||| | ||||| ||||| ||||||||    
T  7882416 taagatcatagtcccttttcggtataatgtcccttcaaaaattatgaatgatcttaaaa 7882358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 18784108 - 18784205
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||  ||||||  |||||||| || ||| | ||| |||| ||||||| |||||| | |||||| |||||    
T  18784108 gtcccttcggaattaagagtgttcttaagaccatatagtcttttttcggtatattgttcattcggaatcaagaatggtcttaagagcatagtcccttc 18784205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 27761442 - 27761523
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggttt--aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||||||||| |||| |||||||||||||  |||||  ||||||||||||||| |||||||| |||||| || ||||| ||||||    
T  27761442 aagagtgttcttaaggccatagtcccttt--ggtttaaaatgtcccttcagaa-taagaatggtcttaagaaaatagtcccttcg 27761523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 28857700 - 28857746
Alignment:
Q  169 aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    ||||||| |||||||||||||||| |||||| |||||||| ||||||    
T  28857700 aatgtccattcagaattaagaatggtcttaagaacatagtcccttcg 28857746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 31064449 - 31064367
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggtttaa--tgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||||||||| ||||| ||||||| ||||  |||||||  ||||||||| ||||| |||||| |||||| |||||||| ||||||    
T  31064449 aagagtgttcttaagatcatagtctcttt--ggtttaaaatgtcccttcggaattgagaatggtcttaagaacatagtcccttcg 31064367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 169 - 215
Target Start/End: Original strand, 33380566 - 33380612
Alignment:
Q  169 aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    ||||||||||| |||||||||||| |||||| |||||||| ||||||    
T  33380566 aatgtcccttcggaattaagaatggtcttaagaacatagtcccttcg 33380612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 212 - 249
Target Start/End: Original strand, 9328163 - 9328200
Alignment:
Q  212 ttcgaaataaagagtactattaagatcatagtcccttt 249  Q
    |||||||  |||||||||||||||||||||||||||||    
T  9328163 ttcgaaaataagagtactattaagatcatagtcccttt 9328200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 10135776 - 10135735
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  10135776 aataaagagtacttttaagatcatagtccctatttggaataa 10135735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 10140544 - 10140503
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  10140544 aataaagagtacttttaagatcatagtccctatttggaataa 10140503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 210 - 247
Target Start/End: Original strand, 33300887 - 33300924
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccct 247  Q
    |||||| ||||||||||||| |||||||||||||||||    
T  33300887 ccttcggaataaagagtacttttaagatcatagtccct 33300924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 250
Target Start/End: Complemental strand, 38621153 - 38621120
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttt 250  Q
    |||||||| |||||||||||||||||||||||||    
T  38621153 aataaagattactattaagatcatagtccctttt 38621120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 47450874 - 47450915
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  47450874 aataaagagtacttttaagatcatagtccctatttggaataa 47450915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 51041157 - 51041198
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  51041157 aataaagagtacttttaagatcatagtccctatttggaataa 51041198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 1924609 - 1924661
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  1924609 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 1924661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 208
Target Start/End: Original strand, 19319806 - 19319842
Alignment:
Q  172 gtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||| |||||||||||||||||| |||||    
T  19319806 gtcccttcagaaataagaatgttcttaaaaatatagt 19319842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 20923623 - 20923675
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  20923623 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 20923675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 40166442 - 40166403
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    |||||| |||||| |||||||||||||||||||||||||||    
T  40166442 ccttcggaataaa-agtactattaagatcatagtccctttt 40166403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 73; Significance: 2e-33; HSPs: 42)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 119 - 260
Target Start/End: Original strand, 1910488 - 1910647
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacat------------- 205  Q
    |||||||  ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||                 
T  1910488 gtccctttggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcataattaagaatggtcttaaaaacatagtccattcgata 1910587  T
Q  206 -----agtaccttcgaaataaagagtactattaagatcatagtccctttttagaataata 260  Q
         ||| |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1910588 atataagtcccttcgaaataaagagtactattaagatcatagtcccttttttgaataata 1910647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 119 - 213
Target Start/End: Original strand, 15951084 - 15951178
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| ||||    
T  15951084 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctttaaaacatagtccctt 15951178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 38181776 - 38181865
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||    
T  38181776 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaaaaatggtcttaaaaacatagt 38181865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 4237896 - 4237993
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  4237896 gtccattcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaacagcatagtcccttcga 4237993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 4242635 - 4242732
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  4242635 gtccattcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatgatcttaacagcatagtcccttcga 4242732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17020913 - 17020816
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  17020913 gtcccttcggaattaagagtgttcttaagaccatagtcctttctcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttcga 17020816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17551350 - 17551253
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||| || |||||||||||||||||  |||||||||||| ||||||||||||||| |||||||    
T  17551350 gtcccttcggaattaagagtgttcttaagaccatagtcctttctcggtttaatgtccctttggaattaagaatggtcttaaaaacatagtcccttcga 17551253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 19167209 - 19167120
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||| |||||||||||| |||| ||||||||||    
T  19167209 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgacccttcggaattaagaatggtctttaaaacatagt 19167120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 31449420 - 31449517
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||| |||||| | |||||| |||||||    
T  31449420 gtcccttcggaattaagagtgttcttaagaccatagtccattttcggtttaatgtcccttcggaattaagaatggtcttaagagcatagtcccttcga 31449517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 1808006 - 1807912
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||||||||| ||| |||||||||||| |||||||||||| || |||||||    
T  1808006 ccttcggaattaagagtgttcttaagaccatagtcacttttcggtttaatgtccattcggaattaagaatggtcttaaaaacattgtcccttcga 1807912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 18875921 - 18876010
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||||  |||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||| |||||||||||||||    
T  18875921 gtcccttcgaaattaagagtgttcttaagaccattgtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagt 18876010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 251
Target Start/End: Complemental strand, 2966181 - 2966062
Alignment:
Q  132 taagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaaataaagagtactat 231  Q
    ||||||||||| ||||||| |||||||| |||||| ||| ||| ||||||||||||||| | ||||||||||||||| |||||  |||||| |||| | |    
T  2966181 taagagtgttcttaagaccttagtccctgttcggtataacgtctcttcagaattaagaacggtcttaaaaacatagtcccttcagaataaaaagtatttt 2966082  T
Q  232 taagatcatagtcccttttt 251  Q
    |||||||||||||| |||||    
T  2966081 taagatcatagtcctttttt 2966062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 44925454 - 44925536
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||||||| ||||||||| ||||||||||| |||||||||||| ||||||||    
T  44925454 gtcccttcggaattaagagtgttcttaagaccatagtccattttcggttcaatgtcccttcggaattaagaatggtcttaaaa 44925536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17026490 - 17026392
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  17026490 gtcccttcggaattaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 17026392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 17556982 - 17556884
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  17556982 gtcccttcggaattaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 17556884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 40125428 - 40125526
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||| ||||||||||||||| |||||||||||||||| |||| ||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  40125428 gtccgttcggaattaagagtgttcttaagaccatagtccctattcgttttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 40125526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17953507 - 17953605
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||| ||||||| |||||| ||| ||||| ||||||||| |||| ||||||||||||  ||||||||||| |||||| | |||||| |||||||    
T  17953507 gtcccttcataattaagtgtgttcttaaaaccatggtccctttttcggtataatgtcccttccaaattaagaatggtcttaagagcatagtcccttcga 17953605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 36684147 - 36684062
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagt---cccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||| ||||| ||||||||| ||   | |||||||||||||||||||||| ||||||||| || ||||||||    
T  36684147 gtcccttcggaattaagaatgttcttaagaccatggtggtctcttttcggtttaatgtcccttcggaattaagagtggtcttaaaa 36684062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 24672856 - 24672945
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||||||| ||||||| |||| || || || || |||||| ||||||||||||||||||||||| | ||| || ||||||||    
T  24672856 gtcccttcggaattaaaagtgttcttaaggccttactctctattcggtataatgtcccttcagaattaagaaaggtctaaagaacatagt 24672945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 17020798 - 17020754
Alignment:
Q  216 aaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  17020798 aaataaagagtactattaagatcattgtccctttttggaataata 17020754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 216 - 260
Target Start/End: Complemental strand, 17551235 - 17551191
Alignment:
Q  216 aaataaagagtactattaagatcatagtccctttttagaataata 260  Q
    ||||||||||||||||||||||||| |||||||||| ||||||||    
T  17551235 aaataaagagtactattaagatcattgtccctttttggaataata 17551191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 208
Target Start/End: Complemental strand, 26779678 - 26779591
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaa-tgttcttaaaaacatagt 208  Q
    ||||| |||| ||||||||||| ||||||| |||||||| |||  | |||||||||||| |||||||||| |||| |||||||||||||    
T  26779678 ccctttagaaataagagtgttcttaagaccttagtccctattcactataatgtcccttcggaattaagaaatgtt-ttaaaaacatagt 26779591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 19167093 - 19167050
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||||||||||||||||||||||||||||  |||||||    
T  19167093 aataaagagtactattaagatcatagtccctttttgaaataata 19167050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Original strand, 18876030 - 18876070
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    |||||| ||||||||||| ||||||||||||||||||||||    
T  18876030 ccttcggaataaagagtaatattaagatcatagtccctttt 18876070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 21387703 - 21387651
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  21387703 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 21387651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 25733721 - 25733773
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  25733721 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 25733773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 26779571 - 26779531
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    ||||||||||||| |||||| ||||||||||||||||||||    
T  26779571 ccttcgaaataaaaagtacttttaagatcatagtccctttt 26779531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 144 - 202
Target Start/End: Original strand, 15875360 - 15875419
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttc-agaattaagaatgttcttaaaaa 202  Q
    ||||| |||||||||||||||||  ||||||||||| | ||||||||||| |||||||||    
T  15875360 taagatcatagtcccttttcggtaaaatgtcccttcgaaaattaagaatgatcttaaaaa 15875419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 217 - 260
Target Start/End: Original strand, 38181892 - 38181935
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||||| |||||||||||||||| ||||| ||||||||    
T  38181892 aataaagagtaccattaagatcatagtccttttttggaataata 38181935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Complemental strand, 19954766 - 19954684
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggtttaa--tgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||||||||| |||| |||||||| |||  ||||||||  ||||||||| |||| ||||||| |||||| |||||||| ||||||    
T  19954766 aagagtgttcttaaggccatagtctctt--cggtttaaaatgtcccttcggaataaagaatggtcttaagaacatagtcccttcg 19954684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 218 - 260
Target Start/End: Original strand, 22714641 - 22714683
Alignment:
Q  218 ataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||||| ||||||||||| ||||||||| ||||||||    
T  22714641 ataaagagtacttttaagatcatactccctttttggaataata 22714683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Original strand, 15951200 - 15951241
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  15951200 aataaagagtacttttaagatcatagtccctatttggaataa 15951241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 33416997 - 33416956
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  33416997 aataaagagtacttttaagatcatagtccctatttggaataa 33416956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 160
Target Start/End: Complemental strand, 33417092 - 33417051
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctt 160  Q
    |||||||  ||||||||||||||| |||||||||||||||||    
T  33417092 gtccctttggaattaagagtgttcttaagaccatagtccctt 33417051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 36684029 - 36683988
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  36684029 aataaagagtacttttaagatcatagtccctatttggaataa 36683988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 18862125 - 18862177
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  18862125 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 18862177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 21384283 - 21384231
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    ||||| || ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  21384283 gtcccgtcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 21384231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 216
Target Start/End: Original strand, 23548161 - 23548245
Alignment:
Q  132 taagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||| ||||||| | |||  | |||||| ||||||| |||  || ||||||| | ||||||||||||||||| |||||    
T  23548161 taagagtgttcttaagacctttgtcgttattcggtataatgtctctttggagttaagaaagatcttaaaaacatagtacattcga 23548245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 28559282 - 28559318
Alignment:
Q  224 agtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  28559282 agtactattaagatcatagttcctttttggaataata 28559318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 224 - 260
Target Start/End: Original strand, 28564461 - 28564497
Alignment:
Q  224 agtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||||||||||||| ||||||| ||||||||    
T  28564461 agtactattaagatcatagttcctttttggaataata 28564497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 172 - 216
Target Start/End: Complemental strand, 33417057 - 33417013
Alignment:
Q  172 gtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  ||||||||||| ||||||||||||||| |||||||    
T  33417057 gtcccttcgaaattaagaatggtcttaaaaacatagtcccttcga 33417013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 37772245 - 37772149
Alignment:
Q  119 gtcccttcagaattaagagtgttcgt-aagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||  ||||||||||||||| | ||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  37772245 gtccctttggaattaagagtgttctttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 37772149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9184951 - 9185048
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||| ||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||||||||| |||||||    
T  9184951 gtcccttcggaaataagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 9185048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 12797489 - 12797393
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| |||||||    
T  12797489 gtcccttcggaattaagagtgttcttaataccatagtcccttttcggtttaatgtcccttcagaattaagaatgctctt-aaaacatagtcccttcga 12797393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 121 - 216
Target Start/End: Original strand, 9180262 - 9180357
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||||| ||||||||| ||||| |||||||    
T  9180262 cccttcggaattaagagtgttcttaagaccatagtcgcttttcggtttaatgtcccttcggaattaagaatggtcttaaaaaaatagtcccttcga 9180357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 1934526 - 1934623
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| || |||||||||||| ||||||||||||| ||||||||||| |||||||||| |||||||||||| ||||||||||||||| |||||||    
T  1934526 gtcccttcggatttaagagtgttcttaagaccatagtcgcttttcggtttcatgtcccttcggaattaagaatggtcttaaaaacatagtcccttcga 1934623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 17968494 - 17968590
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  17968494 gtcccttcggaattaaaagtgttcttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 17968590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 25496856 - 25496952
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  25496856 gtcccttcggaattaagagtgttcttaagaccttagtcccttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 25496952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 123 - 201
Target Start/End: Original strand, 19892008 - 19892086
Alignment:
Q  123 cttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||| ||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  19892008 cttcggaattaagagtgttcttaagatcatagtcccttttcggtttaatgtcccttcagaattaagaatggtcttaaaa 19892086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 18344987 - 18344891
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| ||||||||||||||||||| |||||||||||| ||| |||| ||||||| |||| |||||||||| |||||||    
T  18344987 gtcccttcggaattaagagtgttcttaagaccatagtccctttttggtttaatgtcctttcggaatgaagaatggtctt-aaaacatagtcccttcga 18344891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 25477828 - 25477924
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||| ||||||  |||||||||||||||||||||||||||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  25477828 gtcccttcgaaattaaaagtgtttttaagaccatagtcccttttcggtttaatgtcccttcggaattaagaatggtctt-aaaacatagtcccttcga 25477924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 42926175 - 42926248
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  42926175 gtcccttcggaattaagagtgttcttaataccatagttccttttcggtttaatgtcccttcagaattaagaatg 42926248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 31327315 - 31327218
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccct-tttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| |||| |||||||||| |||||||    
T  31327315 gtcccttcgaaattaagagtgttcttaagaccatagtccctgtttcggttcaatgtcccttcggaattaagaatggtctt-aaaacatagttccttcga 31327218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 122 - 216
Target Start/End: Complemental strand, 29678317 - 29678222
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||||||||||||| |||||||||||||||| |||||||| ||||| ||||| |||||||||||| ||||||   |||||| |||||||    
T  29678317 ccttcagaattaagagtgttcttaagaccatagtccctattcggtttaaatgttccttcggaattaagaatggtcttaagttcatagttccttcga 29678222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 30651480 - 30651382
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||| |||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  30651480 gtcccttcggaataaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 30651382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 7737395 - 7737475
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| || ||||||| |||| |||||||||||||||||| ||||||||||||||||  |||||||||||| ||||||    
T  7737395 gtcccttcggagttaagagcgttcttaagaccatagtccctttacggtttaatgtccctttggaattaagaatggtcttaa 7737475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 121 - 197
Target Start/End: Complemental strand, 28855669 - 28855593
Alignment:
Q  121 cccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttctt 197  Q
    ||||||| |||||||||||||| |||||||||||||||| ||| ||||| ||||| |||| || |||||||| ||||    
T  28855669 cccttcaaaattaagagtgttcttaagaccatagtccctattcagtttattgtcctttcaaaaataagaatggtctt 28855593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 6297448 - 6297543
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  6297448 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 6297543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 17453138 - 17453233
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||  |||||||||||| || |||||||| ||||| ||||| || || ||| ||||| |||||||||||| |||||| | |||||| |||||    
T  17453138 gtccctttggaattaagagtgctcttaagaccaaagtcctttttcagtatattgttccttcggaattaagaatggtcttaatagcatagtcccttc 17453233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 207
Target Start/End: Original strand, 40847135 - 40847210
Alignment:
Q  132 taagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatag 207  Q
    ||||||||||| ||||||| |||||||| ||| || |||||||| |||  ||||||||| | ||||||||||||||    
T  40847135 taagagtgttcttaagaccttagtccctattcagtataatgtccattcgaaattaagaaaggtcttaaaaacatag 40847210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 38591777 - 38591687
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||||||||||||||||||| |||||| ||||||| |||||  | |  |||||||||||  || || ||||| |||||||||||||||    
T  38591777 gtcccttcagaattaagagtgtttgtaagatcatagtctcttttgagataaaatgtcccttcgaaaatatgaatgatcttaaaaacatagt 38591687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 208
Target Start/End: Complemental strand, 7735153 - 7735064
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||||||| |||||||||||| ||||||||| |||| |||| |||  ||||| | || | ||||||||||| |||||| | ||||||    
T  7735153 gtcccttcagatttaagagtgttcttaagaccattgtcctttttaggtaaaatgttcatttataattaagaatggtcttaagagcatagt 7735064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 144 - 201
Target Start/End: Complemental strand, 30651349 - 30651292
Alignment:
Q  144 taagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||| ||||||||||||||||| ||||||||||||| || || ||||| ||||||||    
T  30651349 taagatcatagtcccttttcggtataatgtcccttcaaaaatatgaatgatcttaaaa 30651292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 1284053 - 1284001
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  1284053 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 1284001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 23068308 - 23068364
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||||||||||| |||||||||| || || ||| |||||||||||    
T  23068308 gtcccttcggaattaagagtgttcttaagaccataatctctcttctgtttaatgtcc 23068364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 210 - 258
Target Start/End: Complemental strand, 31327206 - 31327158
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| |||||| ||||||||||||||||| ||| ||||||    
T  31327206 ccttcgaaataaaaagtacttttaagatcatagtccctatttggaataa 31327158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 123 - 214
Target Start/End: Complemental strand, 30643659 - 30643566
Alignment:
Q  123 cttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||| ||||||||||||||| |||||||  |||||||||| ||| | || | ||||||| |||| ||||||| |||||| | |||||| |||||    
T  30643659 cttctgaattaagagtgttcttaagaccatatagtcccttgtcgatatattatcccttcggaatcaagaatggtcttaagagcatagtcccttc 30643566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 199
Target Start/End: Complemental strand, 35602464 - 35602384
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| |||||||||||||| |||||||  |||||||||| ||| | || ||||||||| |||| ||||||| ||||||    
T  35602464 tcccttca-aattaagagtgttcttaagaccatatagtcccttgtcgatatattgtcccttcggaatcaagaatggtcttaa 35602384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 28603750 - 28603709
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  28603750 aataaagagtacttttaagatcatagtccctatttggaataa 28603709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 218 - 258
Target Start/End: Original strand, 9185065 - 9185105
Alignment:
Q  218 ataaagagtactattaagatcatagtccctttttagaataa 258  Q
    |||||||||||| ||||||||||||||||| ||| ||||||    
T  9185065 ataaagagtacttttaagatcatagtccctatttggaataa 9185105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 214
Target Start/End: Original strand, 10160286 - 10160373
Alignment:
Q  129 aattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||||||||| |||||||  ||||||| || ||| | || ||||||||| |||| ||||||| |||||| | |||||| |||||    
T  10160286 aattaagagtgttcttaagaccatatagtccattgtcgatatattgtcccttcggaatcaagaatggtcttaagagcatagtcccttc 10160373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 30344471 - 30344523
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  30344471 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 30344523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 30619432 - 30619360
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaat 191  Q
    |||||||||||||||| || |||| |||||||||| ||| |||| ||  ||||||||||| | || |||||||    
T  30619432 gtcccttcagaattaaaagagttcttaagaccataatccttttttgggataatgtccctttataactaagaat 30619360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054 (Bit Score: 67; Significance: 8e-30; HSPs: 4)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 119 - 213
Target Start/End: Complemental strand, 29737 - 29643
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtacctt 213  Q
    |||||||| ||||||||||||||| ||||| |||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  29737 gtcccttcggaattaagagtgttcttaagatcatattccctcttcggtttaatgtcccttcagaattaagaatggtcttaaaaacatagtccctt 29643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 26018 - 25921
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||||| || ||||| ||||||||||||||||||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||    
T  26018 gtcccttcggaattacgattgttcttaagaccatagtcccttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtcccttcga 25921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #3
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 217 - 260
Target Start/End: Complemental strand, 25902 - 25859
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataata 260  Q
    |||||||||| |||||||||||||||||||||||| ||||||||    
T  25902 aataaagagtgctattaagatcatagtccctttttggaataata 25859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0054; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 228 - 260
Target Start/End: Complemental strand, 29611 - 29579
Alignment:
Q  228 ctattaagatcatagtccctttttagaataata 260  Q
    |||||||||||||||||||||||| ||||||||    
T  29611 ctattaagatcatagtccctttttggaataata 29579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 9436 - 9533
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||| |||||| | |||||| |||||||    
T  9436 gtcccttcggaattaagagtgttcttaagaccatagtcccttttcggtttaatgtccattcggaattaagaatggtcttaagagcatagtcccttcga 9533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 64; Significance: 5e-28; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 2595386 - 2595283
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaa 217  Q
    ||||||||  |||||||||||||| ||||||| ||||||||||| ||||||||||||||||| |||||||||||| ||||||||||||||| | ||||||    
T  2595386 gtcccttcgaaattaagagtgttcttaagaccgtagtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagtccattcgaa 2595287  T
Q  218 ataa 221  Q
    ||||    
T  2595286 ataa 2595283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 26341771 - 26341689
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||||||| |||||||||||| ||||||||    
T  26341771 gtcccttcggaattaagagtgttcttaagaccataatcccttttcggtttaatgtcccttcggaattaagaatggtcttaaaa 26341689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 42626121 - 42626215
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||| | |||||||||||| |||| |||||||||| |||||    
T  42626121 gtcccttcggaatcaagagtgttcttaagaccatagtcccttttcggtttaatgtccctccggaattaagaatggtctt-aaaacatagtcccttc 42626215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 120 - 216
Target Start/End: Complemental strand, 4930782 - 4930687
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||||  ||||||||||| ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||| |||||||    
T  4930782 tcccttcaga--taagagtgttcttaagaccatagtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaaaaacatagtcccttcga 4930687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 120 - 208
Target Start/End: Complemental strand, 8268857 - 8268768
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||  |||||| ||||||| |||||| |||||||||||| ||||||||||||||||| |||||||||||| |||||||||||||||    
T  8268857 tcccttcgaaattaacagtgttcttaagacgatagtccctttttcggtttaatgtcccttcggaattaagaatggtcttaaaaacatagt 8268768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 201
Target Start/End: Original strand, 44422670 - 44422752
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    |||||||| ||||||||||||||| |||||||||||| | ||||| ||||||||||||||| |||||||||||| || |||||    
T  44422670 gtcccttcggaattaagagtgttcttaagaccatagttctttttccgtttaatgtcccttcggaattaagaatggtcgtaaaa 44422752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4580061 - 4579964
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||  ||||||||||||||| |||||||||| |||||||||||| |||||||  |||||||||||||||| | |||| | |||||| |||||||    
T  4580061 gtccctttggaattaagagtgttcttaagaccataatcccttttcggtataatgtcatttcagaattaagaatggttttaagagcatagtcccttcga 4579964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 131 - 208
Target Start/End: Complemental strand, 19640828 - 19640751
Alignment:
Q  131 ttaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||| |||| || |||||||| |||||||||||||||    
T  19640828 ttaagagtgttcttaagaccatagacccttttcggtttattgtcctttcaaaactaagaatggtcttaaaaacatagt 19640751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 119 - 201
Target Start/End: Complemental strand, 12799949 - 12799866
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccctttt-cggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||||||  |||||||||||||  ||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||    
T  12799949 gtcccttcgaaattaagagtgttattaagaccatagtccctttttcggtttaatgtcccttcgaaattaagaatggtcttaaaa 12799866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 16372960 - 16372863
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||| ||||||||||||||||||| ||||| | | ||  ||||| ||| |||||||||||| |||||||||||| |||||| |||||||| |||||||    
T  16372960 gtcctttcagaattaagagtgttcttaagatcttggtttctttttggtataatgtcccttcggaattaagaatggtcttaagaacatagtcccttcga 16372863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 30258664 - 30258567
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    ||||||||  |||||||||| ||| ||||||||| || |||||| |||||||||||||||| |||||||||||| | | ||||||| ||| |||||||    
T  30258664 gtcccttcgaaattaagagtcttcttaagaccattgtgccttttgggtttaatgtcccttcggaattaagaatggtataaaaaacacagtcccttcga 30258567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 27256775 - 27256680
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||||||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  27256775 gtcccttcagaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 27256680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 216
Target Start/End: Complemental strand, 3880532 - 3880445
Alignment:
Q  129 aattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||||||||| |||||| ||||||| ||||||||||||||| |||||  ||||| ||||| ||||||   |||||| |||||||    
T  3880532 aattaagagtgttcttaagactatagtccattttcggtttaatgttccttcgaaattatgaatggtcttaagttcatagtcccttcga 3880445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 206
Target Start/End: Original strand, 26286676 - 26286763
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacata 206  Q
    |||||||| ||| ||| ||| ||| |||||||| ||| | |||||||| |||||||||||| |||||||||||| |||||||| ||||    
T  26286676 gtcccttcggaactaaaagttttcttaagaccacagttcattttcggtataatgtcccttcggaattaagaatggtcttaaaagcata 26286763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 40864920 - 40865015
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| |||||| | |||||| |||||    
T  40864920 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaagagcatagtcccttc 40865015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 10387886 - 10387975
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    |||||||| ||| ||| ||||||  ||||||| |||||| | |||||| |||||||||||| ||||||||||   |||||||||||||||    
T  10387886 gtcccttcggaaataatagtgtttttaagaccttagtccttattcggtataatgtcccttcggaattaagaaaagtcttaaaaacatagt 10387975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 16580768 - 16580716
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||||||||||| |||||||||| ||||| |||||||||||    
T  16580768 gtcccttcggaattaagagtgttcttaagaccataatccctcttcggtttaat 16580716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 13313817 - 13313876
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtccctt 178  Q
    |||||||| ||||||||||||||| |||||||||| ||  |||| |||||||||||||||    
T  13313817 gtcccttcggaattaagagtgttcttaagaccatattcattttttggtttaatgtccctt 13313876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 15642809 - 15642684
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcgaaa 218  Q
    |||||||||||||||| ||||||| ||| ||  |||||| | || |   ||||||||||| ||||| || ||||   |||| | |||| | |||||||||    
T  15642809 gtcccttcagaattaatagtgttcttaatacattagtccttattggagataatgtccctttagaatcaaaaatgactttaagagcataatcccttcgaaa 15642710  T
Q  219 taaagagtactattaagatcatagtc 244  Q
    ||||||||||| ||||||| ||||||    
T  15642709 taaagagtacttttaagattatagtc 15642684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 201
Target Start/End: Complemental strand, 21671757 - 21671676
Alignment:
Q  120 tcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaa 201  Q
    ||||||| ||||||||||| ||| ||||||| |||||||| ||| || |||||||| ||  |||||||||| | ||||||||    
T  21671757 tcccttcggaattaagagttttcataagaccttagtccctattcagtataatgtccatttggaattaagaaagatcttaaaa 21671676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 133 - 215
Target Start/End: Original strand, 6898003 - 6898084
Alignment:
Q  133 aagagtgttcgtaagaccatagtcccttttcggtttaa-tgtcccttcagaattaagaatgttcttaaaaacatagtaccttcg 215  Q
    |||||||||| ||||  |||||||||||  |||||||| |||| |||| |||||||||||| |||||| |||||||| ||||||    
T  6898003 aagagtgttcttaaggtcatagtccctt--cggtttaaatgtctcttcggaattaagaatggtcttaagaacatagtcccttcg 6898084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 14259545 - 14259489
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||||||||||| |||||||||| | ||| ||| |||||||||||    
T  14259545 gtcccttcggaattaagagtgttcttaagaccataattcctcttctgtttaatgtcc 14259489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 16459936 - 16459988
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  16459936 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 16459988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 18426466 - 18426414
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  18426466 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 18426414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 20488487 - 20488435
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  20488487 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 20488435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 45169486 - 45169538
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||||||| ||||| |||||||||||    
T  45169486 gtcccttcggaattaaaagtgttcttaagaccataatccctcttcggtttaat 45169538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 23866609 - 23866515
Alignment:
Q  122 ccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    ||||| ||||||||||||||| |||||||  |||||||||| ||| | || ||||||||| |||| ||||||  |||||| | |||||| |||||    
T  23866609 ccttcggaattaagagtgttcttaagaccatatagtcccttgtcgatatattgtcccttcggaatcaagaatagtcttaagagcatagtcccttc 23866515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 10498631 - 10498597
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccata 153  Q
    ||||||||||||||| |||||||||||||||||||    
T  10498631 gtcccttcagaattaggagtgttcgtaagaccata 10498597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 10499739 - 10499793
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgt 173  Q
    ||||||| |||||||||||||||| ||||||| || ||||| |||||| ||||||    
T  10499739 gtccctttagaattaagagtgttcttaagaccttaatccctattcggtataatgt 10499793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 10503660 - 10503626
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccata 153  Q
    ||||||||||||||| |||||||||||||||||||    
T  10503660 gtcccttcagaattaggagtgttcgtaagaccata 10503626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 173
Target Start/End: Original strand, 10504768 - 10504822
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgt 173  Q
    ||||||| |||||||||||||||| ||||||| || ||||| |||||| ||||||    
T  10504768 gtccctttagaattaagagtgttcttaagaccttaatccctattcggtataatgt 10504822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Complemental strand, 13337244 - 13337210
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccata 153  Q
    ||||||||||||||| |||||||||||||||||||    
T  13337244 gtcccttcagaattaggagtgttcgtaagaccata 13337210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 153
Target Start/End: Original strand, 44509929 - 44509963
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccata 153  Q
    |||||||||||||||||||||||| ||||||||||    
T  44509929 gtcccttcagaattaagagtgttcttaagaccata 44509963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 8268741 - 8268700
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  8268741 aataaagagtacttttaagatcatagtccctatttggaataa 8268700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 20485126 - 20485074
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| |||||||  |||||| |||||||||| ||||| |||||||||||    
T  20485126 gtcccttcggaattaaatgtgttcttaagaccataatccctcttcggtttaat 20485074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 250
Target Start/End: Complemental strand, 21671652 - 21671612
Alignment:
Q  210 ccttcgaaataaagagtactattaagatcatagtccctttt 250  Q
    |||||| ||||||||||||| |||||||||| |||||||||    
T  21671652 ccttcggaataaagagtacttttaagatcatggtccctttt 21671612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352 (Bit Score: 62; Significance: 7e-27; HSPs: 2)
Name: scaffold0352
Description:

Target: scaffold0352; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 7669 - 7573
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||||||||||  ||||||||||| |||| |||||||||| |||||||    
T  7669 gtcccttcggaattaagagtgttattaagaccatagtcccttttcggtttaatgtcccttcgaaattaagaatggtctt-aaaacatagtcccttcga 7573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0352; HSP #2
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 217 - 258
Target Start/End: Complemental strand, 7554 - 7513
Alignment:
Q  217 aataaagagtactattaagatcatagtccctttttagaataa 258  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  7554 aataaagagtacttttaagatcatagtccctatttggaataa 7513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 443476 - 443572
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||| ||||||||| ||||| |||||||||||| |||| |||||||||| |||||||    
T  443476 gtcccttcggaattaatagtgttcttaagaccatagtcccttttcagtttaatgttccttcggaattaagaatggtctt-aaaacatagtcccttcga 443572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4626 - 4528
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggttt-aatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||||||| |||||||||||||||| |||||||| ||||||||||| |||||||||||| ||||||   |||||| |||||||    
T  4626 gtcccttcggaattaagagtgttcttaagaccatagtccctattcggtttaaatgtcccttcggaattaagaatggtcttaagttcatagtcccttcga 4528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0240 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 216
Target Start/End: Complemental strand, 4536 - 4440
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| |||||||| |||||| |||||||||||| | |||||||| |||||||||||| |||||||||||| |||||||| |||||| |||||||    
T  4536 gtcccttcggaattaagtgtgttcttaagaccatagttcattttcggtataatgtcccttcggaattaagaatg-tcttaaaagcatagtcccttcga 4440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 256352 - 256279
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||| ||| ||||||||| ||||| ||||||| |||||||||||||||||| |||||||||||||| |||||||    
T  256352 gtccattcggaattaagaatgttcttaagaccgtagtcccttttcggtttattgtcccttcagaataaagaatg 256279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 183
Target Start/End: Complemental strand, 6927 - 6863
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaa 183  Q
    |||||||| ||||||||||||||| |||||||||| ||||| ||| ||||||||||| |||||||    
T  6927 gtcccttcggaattaagagtgttcttaagaccataatccctcttctgtttaatgtcctttcagaa 6863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 47528 - 47608
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||||||| |||||||| ||||||    
T  47528 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcagaaataagaatggtcttaa 47608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0060; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 119 - 199
Target Start/End: Original strand, 52472 - 52552
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||||||||||||||||||| |||||||||||||| |  |||||||| | ||| ||| ||| |||||||| ||||||    
T  52472 gtcccttcagaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcggaaataagaatggtcttaa 52552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 132 - 208
Target Start/End: Original strand, 147936 - 148012
Alignment:
Q  132 taagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagt 208  Q
    ||||||||||| ||||||| |||||||| |||| | ||||||||| || |||||||||| | |||||||||||||||    
T  147936 taagagtgttcttaagaccttagtccctattcgatataatgtcccatcggaattaagaaagatcttaaaaacatagt 148012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 148807 - 148853
Alignment:
Q  131 ttaagagtgttcgtaagaccatagtcccttttcggtttaatgtccct 177  Q
    |||||||||||| |||||||||| ||||| ||||||||| |||||||    
T  148807 ttaagagtgttcttaagaccataatccctattcggtttattgtccct 148853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 131 - 177
Target Start/End: Original strand, 163987 - 164033
Alignment:
Q  131 ttaagagtgttcgtaagaccatagtcccttttcggtttaatgtccct 177  Q
    |||||||||||| |||||||||||||||| |||||| || |||||||    
T  163987 ttaagagtgttcttaagaccatagtccctgttcggtatattgtccct 164033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 83594 - 83496
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttt-tcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttc 214  Q
    |||||||| ||||||||||||||| |||||||  ||||||||||| ||||| || |||||||||||||| ||||| | |||||| | |||||| |||||    
T  83594 gtcccttcggaattaagagtgttcttaagaccatatagtccctttgtcggtatattgtcccttcagaatcaagaacggtcttaagagcatagtcccttc 83496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 199
Target Start/End: Complemental strand, 81354 - 81272
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagacc--atagtcccttttcggtttaatgtcccttcagaattaagaatgttcttaa 199  Q
    |||||||| ||||||||||||||| |||||||  |||||||||| || || || ||||||||| |||| || |||| ||||||    
T  81354 gtcccttcggaattaagagtgttcttaagaccatatagtcccttgtccgtatattgtcccttcggaatcaataatgatcttaa 81272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Original strand, 49539 - 49612
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||||||| ||||||||    
T  49539 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcagaaataagaatg 49612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 119 - 192
Target Start/End: Complemental strand, 149095 - 149022
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcccttcagaattaagaatg 192  Q
    |||||||| ||||||||||||||| |||||||||||||| |  |||||||| | ||| ||||||| ||||||||    
T  149095 gtcccttcggaattaagagtgttcttaagaccatagtccatcgtcggtttattatcctttcagaaataagaatg 149022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 119 - 216
Target Start/End: Original strand, 145962 - 146059
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtccc-ttttcggtttaatgtcccttcagaattaagaatgttcttaaaaacatagtaccttcga 216  Q
    |||||||| ||||||||||| ||| ||||| ||||||||| |||||||| |||||||| |||| || |||||||| | |||| | |||||| |||||||    
T  145962 gtcccttcggaattaagagt-ttcttaagagcatagtccctttttcggtataatgtccattcaaaaataagaatggttttaagagcatagtcccttcga 146059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 171
Target Start/End: Complemental strand, 126942 - 126890
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||||||||||| |||||||||| ||||| ||| |||||||    
T  126942 gtcccttcggaattaagagtgttcttaagaccataatccctcttctgtttaat 126890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 7706 - 7650
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||||||||||| |||||||||| || || ||| |||||||||||    
T  7706 gtcccttcggaattaagagtgttcttaagaccataatctctcttctgtttaatgtcc 7650  T

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Target: scaffold0018 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 21846 - 21791
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtc 174  Q
    |||||||| ||||||||||||||| |||||||||| || || ||| ||||||||||    
T  21846 gtcccttcggaattaagagtgttcttaagaccataatctctcttctgtttaatgtc 21791  T

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Target: scaffold0096 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 22248 - 22192
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaatgtcc 175  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| ||| |||||||||||    
T  22248 gtcccttcggaattaatagtgttcttaagactataatccctcttctgtttaatgtcc 22192  T

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Target: scaffold0031 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 119 - 171
Target Start/End: Original strand, 35566 - 35618
Alignment:
Q  119 gtcccttcagaattaagagtgttcgtaagaccatagtcccttttcggtttaat 171  Q
    |||||||| ||||||| ||||||| |||||| ||| ||||| |||||||||||    
T  35566 gtcccttcggaattaaaagtgttcttaagactataatccctcttcggtttaat 35618  T

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