View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8469_low_10 (Length: 416)
Name: NF8469_low_10
Description: NF8469
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8469_low_10 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 384; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 384; E-Value: 0
Query Start/End: Original strand, 1 - 416
Target Start/End: Original strand, 40517552 - 40517967
Alignment:
| Q |
1 |
aggattgaatcaattaacaacttaggaggaggttgtgtaactcgaccgatttgagttaaaagttcaaacttatacgaaagaatagatattatttttaaca |
100 |
Q |
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| T |
40517552 |
aggattgaatcaattaacaacttaggaggaggttgtgtaactcgatcgatttaagttaaaagttcaaacttatacgaaagaataaatattatttttaaca |
40517651 |
T |
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| Q |
101 |
actaattattaaaatttgttataaagcacttaaccatatcaactaattataaacctaaactcttttaagcttattctttgagggtacaactacggtgact |
200 |
Q |
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| T |
40517652 |
actaattattaaaatttgttataaaacacttaaccatatcaactaattataaacctaaactcttttaagcttattctttgagggtacaactacagtgact |
40517751 |
T |
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| Q |
201 |
aatcattcaaatcaagtaggatctcgatagtcggtgaaaaaactcttcatcaatatattaaacattttcaagctctggtttgtttaatcagcaaaaataa |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
40517752 |
aatcattcaaatcaagtaggatctcgatagtcggtgaaaaaaatcttcatcaatatattaaacattttcaagctctggtttgtttaatcagcaaaaacaa |
40517851 |
T |
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| Q |
301 |
ataataagtactagttttaaagattccataggagcctataaatataatactaccttcaagacttgttgtgtgtgatctcgtcacctgcctgctaatacta |
400 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
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| T |
40517852 |
ataataagtactagttttaaagattccataggagcctataaatataatactaccttcaagacttgttgtgtctgatctcgtcacctgcctgctaatacta |
40517951 |
T |
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| Q |
401 |
aatatcacatttacta |
416 |
Q |
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| T |
40517952 |
aatatcacatttacta |
40517967 |
T |
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