View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8471_high_12 (Length: 241)
Name: NF8471_high_12
Description: NF8471
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8471_high_12 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 7 - 241
Target Start/End: Original strand, 37257814 - 37258048
Alignment:
| Q |
7 |
ctagtaatatataatgatgattggatgatgtaaaattggttgtcatttgtcaactctaaaaaagtttaatttgtcatcccctacaaaaatttcatttggt |
106 |
Q |
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| T |
37257814 |
ctagtaatatgtaatgatgattggatggtgtaaaattggttgtcatttgtcaactctaaaaaagtttaatttgtcatctcctacaaaaatttaatttggt |
37257913 |
T |
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| Q |
107 |
gtggcagcagatcattaaatatataagtaataattgtatcctcactgagtataccaactaattaaacttaatataaaattaatggatgtgcgttgtctat |
206 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37257914 |
gtggtagcagatcattaaatatataagtaataattgtatcctcactgagtataccaactaattaaacttaatataaaattaatggatgtgcgttgtctat |
37258013 |
T |
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| Q |
207 |
gcaaaacattttacattgacatctaacaagaactc |
241 |
Q |
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| T |
37258014 |
gcaaaacattttacattgacatctaacaagaactc |
37258048 |
T |
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