View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8472_high_1 (Length: 241)
Name: NF8472_high_1
Description: NF8472
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8472_high_1 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 19 - 241
Target Start/End: Original strand, 2128087 - 2128309
Alignment:
| Q |
19 |
cagagggccatcattgtctcaattatcagcgtgggtgagagagaagatgcagaaagagtacatgcctcgtacatcataaacatacatataaaatgtactc |
118 |
Q |
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| T |
2128087 |
cagagggccatcattgtctcaattatcagcgtgggtgagagagaagatgcagaaagagtacatgcctcgtacatcataaacatacatataaaatgtactc |
2128186 |
T |
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| Q |
119 |
cctaacacacaaatcatgttttaatttgtaccacatgcaatgcaatgacatgtttatagatttaatacattatggttagaattatactaatgcatgaact |
218 |
Q |
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| T |
2128187 |
cctaacacacaaatcatgttttaatttgtaccacatgcaatgcaatgacatgtttatagatttaatacattatggttagagttatactaatgcatgaact |
2128286 |
T |
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| Q |
219 |
aattaggtttagtcaatgagcct |
241 |
Q |
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| T |
2128287 |
aattaggtttagtcaatgagcct |
2128309 |
T |
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