View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8474_low_2 (Length: 647)

Name: NF8474_low_2
Description: NF8474
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8474_low_2
NF8474_low_2
[»] chr3 (47 HSPs)
chr3 (34-629)||(24684825-24685432)
chr3 (433-570)||(30956688-30956825)
chr3 (433-570)||(30972500-30972637)
chr3 (428-586)||(35959502-35959660)
chr3 (157-297)||(24653433-24653574)
chr3 (161-295)||(24631760-24631893)
chr3 (428-607)||(20880343-20880521)
chr3 (428-576)||(20170389-20170537)
chr3 (163-292)||(24682419-24682552)
chr3 (449-616)||(39980616-39980783)
chr3 (450-592)||(12862288-12862429)
chr3 (431-570)||(53789523-53789662)
chr3 (425-563)||(3845631-3845769)
chr3 (499-581)||(21335612-21335694)
chr3 (508-616)||(36631067-36631175)
chr3 (449-552)||(46778307-46778410)
chr3 (499-569)||(583983-584053)
chr3 (434-552)||(2719341-2719459)
chr3 (452-581)||(29520530-29520658)
chr3 (434-537)||(1508675-1508779)
chr3 (494-566)||(10704639-10704711)
chr3 (513-592)||(49034303-49034382)
chr3 (319-425)||(24653276-24653382)
chr3 (527-629)||(30443858-30443960)
chr3 (452-581)||(5331184-5331312)
chr3 (485-581)||(18405882-18405979)
chr3 (435-568)||(19983653-19983785)
chr3 (505-577)||(37689176-37689246)
chr3 (499-566)||(849599-849666)
chr3 (507-570)||(44061085-44061148)
chr3 (512-566)||(25447310-25447364)
chr3 (431-513)||(31365391-31365473)
chr3 (506-567)||(16073108-16073169)
chr3 (525-606)||(36189529-36189610)
chr3 (507-579)||(402595-402666)
chr3 (507-570)||(8142774-8142835)
chr3 (532-592)||(20257505-20257565)
chr3 (544-592)||(47132313-47132361)
chr3 (527-569)||(14145877-14145919)
chr3 (499-528)||(42545498-42545527)
chr3 (426-471)||(42747912-42747957)
chr3 (502-563)||(53493985-53494046)
chr3 (431-471)||(849551-849591)
chr3 (507-566)||(1141153-1141213)
chr3 (431-471)||(3846042-3846082)
chr3 (507-558)||(34638038-34638090)
chr3 (506-550)||(39602291-39602335)
[»] chr2 (46 HSPs)
chr2 (434-567)||(12795664-12795797)
chr2 (449-607)||(32592474-32592631)
chr2 (432-623)||(12464482-12464673)
chr2 (431-580)||(41407170-41407320)
chr2 (427-567)||(42659216-42659356)
chr2 (459-568)||(41241196-41241305)
chr2 (459-559)||(42868534-42868634)
chr2 (499-629)||(43279532-43279660)
chr2 (429-581)||(15757709-15757869)
chr2 (431-586)||(39659555-39659709)
chr2 (435-570)||(41851408-41851543)
chr2 (427-570)||(15305521-15305665)
chr2 (429-537)||(23974585-23974693)
chr2 (507-570)||(42420356-42420419)
chr2 (500-570)||(2227104-2227174)
chr2 (449-567)||(3311931-3312049)
chr2 (431-517)||(11863800-11863886)
chr2 (525-607)||(39073714-39073796)
chr2 (422-487)||(1633691-1633756)
chr2 (451-566)||(33319878-33319994)
chr2 (499-563)||(41812159-41812223)
chr2 (459-629)||(26201925-26202095)
chr2 (479-560)||(45229429-45229510)
chr2 (504-552)||(10619295-10619343)
chr2 (459-539)||(22971611-22971690)
chr2 (456-560)||(31561825-31561929)
chr2 (507-554)||(4026762-4026809)
chr2 (499-629)||(12194888-12195019)
chr2 (433-492)||(43570297-43570356)
chr2 (509-575)||(11201439-11201505)
chr2 (505-567)||(13325513-13325575)
chr2 (546-616)||(27695611-27695681)
chr2 (525-575)||(36114580-36114630)
chr2 (507-536)||(2195906-2195935)
chr2 (507-580)||(10494613-10494686)
chr2 (509-614)||(18066075-18066180)
chr2 (507-592)||(28206212-28206297)
chr2 (459-559)||(28330372-28330472)
chr2 (510-575)||(36125126-36125191)
chr2 (425-470)||(41812236-41812281)
chr2 (529-570)||(43199855-43199896)
chr2 (501-565)||(3932289-3932353)
chr2 (435-503)||(27695716-27695784)
chr2 (506-566)||(40835478-40835538)
chr2 (507-555)||(42457893-42457941)
chr2 (525-581)||(44439411-44439467)
[»] chr1 (64 HSPs)
chr1 (429-592)||(41505554-41505716)
chr1 (427-565)||(37473264-37473402)
chr1 (499-629)||(47432033-47432162)
chr1 (427-586)||(14576699-14576858)
chr1 (499-586)||(30581994-30582081)
chr1 (480-629)||(37631562-37631711)
chr1 (433-570)||(51688576-51688713)
chr1 (483-629)||(7861999-7862145)
chr1 (431-557)||(14331658-14331784)
chr1 (507-607)||(17603409-17603512)
chr1 (501-616)||(24915067-24915182)
chr1 (478-581)||(27976511-27976614)
chr1 (431-629)||(1510313-1510510)
chr1 (452-616)||(3234031-3234203)
chr1 (504-586)||(30581744-30581825)
chr1 (428-581)||(33541759-33541912)
chr1 (427-565)||(44932002-44932137)
chr1 (504-607)||(13809940-13810043)
chr1 (426-564)||(41195261-41195400)
chr1 (508-581)||(836390-836463)
chr1 (494-615)||(34795442-34795563)
chr1 (477-607)||(2295019-2295141)
chr1 (480-607)||(42174775-42174900)
chr1 (514-569)||(15477530-15477585)
chr1 (501-592)||(26678842-26678933)
chr1 (507-562)||(45145171-45145226)
chr1 (507-614)||(49888712-49888819)
chr1 (456-586)||(18556821-18556950)
chr1 (455-517)||(24552455-24552517)
chr1 (503-581)||(37769711-37769789)
chr1 (431-492)||(5894293-5894354)
chr1 (477-586)||(14385809-14385918)
chr1 (421-470)||(34795566-34795615)
chr1 (437-570)||(42391241-42391373)
chr1 (434-581)||(30191863-30192011)
chr1 (499-607)||(36872670-36872777)
chr1 (432-492)||(47498973-47499033)
chr1 (499-566)||(7107583-7107645)
chr1 (506-581)||(33186210-33186285)
chr1 (428-581)||(33546504-33546654)
chr1 (428-522)||(5741528-5741622)
chr1 (428-470)||(17603533-17603575)
chr1 (503-569)||(17830095-17830160)
chr1 (512-578)||(41184704-41184770)
chr1 (508-629)||(473110-473231)
chr1 (510-567)||(9572173-9572230)
chr1 (507-579)||(1432460-1432532)
chr1 (506-570)||(5063407-5063471)
chr1 (507-551)||(29904704-29904748)
chr1 (494-566)||(33835576-33835648)
chr1 (494-566)||(33914130-33914202)
chr1 (433-488)||(30581683-30581738)
chr1 (427-518)||(38247319-38247409)
chr1 (507-570)||(38578472-38578535)
chr1 (509-567)||(51190808-51190866)
chr1 (432-469)||(24562466-24562503)
chr1 (511-580)||(36070199-36070268)
chr1 (509-557)||(36872215-36872264)
chr1 (425-470)||(37617564-37617609)
chr1 (425-470)||(49938611-49938656)
chr1 (506-581)||(2194411-2194484)
chr1 (544-580)||(6556953-6556989)
chr1 (506-586)||(37517240-37517320)
chr1 (549-629)||(49938734-49938814)
[»] chr4 (46 HSPs)
chr4 (427-592)||(50681129-50681294)
chr4 (492-606)||(9760370-9760484)
chr4 (428-553)||(43505824-43505947)
chr4 (425-522)||(18814955-18815051)
chr4 (456-581)||(41336655-41336779)
chr4 (499-586)||(31076432-31076519)
chr4 (427-569)||(17204003-17204145)
chr4 (477-570)||(22030119-22030211)
chr4 (499-580)||(54069469-54069550)
chr4 (499-567)||(25904275-25904343)
chr4 (485-607)||(33586980-33587101)
chr4 (449-581)||(15173351-15173483)
chr4 (423-567)||(19494775-19494919)
chr4 (495-623)||(20108942-20109070)
chr4 (507-592)||(21731696-21731778)
chr4 (506-581)||(44797830-44797905)
chr4 (533-579)||(53294167-53294213)
chr4 (477-581)||(15177253-15177357)
chr4 (508-592)||(17884014-17884098)
chr4 (506-586)||(42404044-42404124)
chr4 (506-616)||(2243993-2244105)
chr4 (503-581)||(16200032-16200110)
chr4 (419-469)||(39603594-39603644)
chr4 (507-556)||(3155548-3155597)
chr4 (507-580)||(11347723-11347796)
chr4 (507-579)||(7601704-7601776)
chr4 (499-587)||(23319779-23319867)
chr4 (425-521)||(24169124-24169220)
chr4 (426-539)||(26984-27089)
chr4 (426-581)||(29912813-29912967)
chr4 (449-539)||(31851343-31851431)
chr4 (525-616)||(39691159-39691250)
chr4 (425-607)||(46592234-46592417)
chr4 (477-592)||(49940209-49940327)
chr4 (507-629)||(50662741-50662857)
chr4 (509-567)||(1706569-1706627)
chr4 (429-471)||(2243944-2243986)
chr4 (510-580)||(25885807-25885877)
chr4 (529-567)||(39137504-39137542)
chr4 (509-567)||(51630058-51630116)
chr4 (506-580)||(55414472-55414546)
chr4 (544-581)||(7839412-7839449)
chr4 (425-470)||(38337056-38337101)
chr4 (507-539)||(8422930-8422962)
chr4 (499-567)||(13126674-13126740)
chr4 (507-539)||(21193943-21193975)
[»] chr7 (46 HSPs)
chr7 (425-604)||(9210491-9210669)
chr7 (427-570)||(46078012-46078157)
chr7 (428-616)||(45263959-45264149)
chr7 (435-580)||(4970845-4970985)
chr7 (428-539)||(33128623-33128734)
chr7 (499-607)||(420297-420405)
chr7 (432-532)||(21568728-21568828)
chr7 (428-580)||(119775-119928)
chr7 (452-581)||(45806528-45806657)
chr7 (425-581)||(48469913-48470063)
chr7 (542-629)||(34744008-34744095)
chr7 (432-586)||(38138525-38138679)
chr7 (513-581)||(11700317-11700385)
chr7 (426-567)||(30570996-30571129)
chr7 (535-607)||(43694595-43694667)
chr7 (452-567)||(34464278-34464392)
chr7 (431-605)||(46280299-46280460)
chr7 (499-592)||(45338386-45338478)
chr7 (508-607)||(19022610-19022709)
chr7 (506-581)||(19302610-19302685)
chr7 (507-570)||(28613596-28613659)
chr7 (499-570)||(45806388-45806459)
chr7 (514-616)||(20234435-20234536)
chr7 (457-566)||(20428362-20428474)
chr7 (513-570)||(20258463-20258520)
chr7 (513-570)||(20269527-20269584)
chr7 (431-492)||(33672957-33673018)
chr7 (503-580)||(39279704-39279781)
chr7 (431-492)||(39393705-39393766)
chr7 (483-575)||(48140137-48140227)
chr7 (424-512)||(3308372-3308460)
chr7 (433-569)||(18865114-18865249)
chr7 (428-492)||(38500058-38500122)
chr7 (427-486)||(27863843-27863902)
chr7 (435-579)||(33287718-33287864)
chr7 (513-580)||(34083577-34083644)
chr7 (499-581)||(33266535-33266617)
chr7 (501-559)||(45004705-45004763)
chr7 (449-538)||(23989578-23989667)
chr7 (502-567)||(40252172-40252237)
chr7 (519-579)||(8960680-8960740)
chr7 (499-559)||(31247601-31247661)
chr7 (499-535)||(31247666-31247702)
chr7 (426-486)||(40252242-40252302)
chr7 (501-565)||(44216842-44216906)
chr7 (503-566)||(48507662-48507726)
[»] chr8 (31 HSPs)
chr8 (425-567)||(1058139-1058281)
chr8 (428-622)||(35534623-35534813)
chr8 (432-586)||(12976086-12976237)
chr8 (427-554)||(14956373-14956500)
chr8 (477-587)||(38750273-38750383)
chr8 (499-567)||(12497296-12497364)
chr8 (432-569)||(29205676-29205815)
chr8 (477-586)||(10758302-10758411)
chr8 (427-539)||(36963438-36963550)
chr8 (513-580)||(16733980-16734047)
chr8 (505-580)||(26771208-26771283)
chr8 (48-135)||(41806266-41806353)
chr8 (482-581)||(42043396-42043495)
chr8 (436-616)||(9130322-9130506)
chr8 (499-581)||(25930605-25930687)
chr8 (165-215)||(41800036-41800086)
chr8 (434-567)||(29168122-29168250)
chr8 (161-280)||(41806093-41806212)
chr8 (516-623)||(38602288-38602394)
chr8 (454-538)||(38353242-38353325)
chr8 (499-581)||(11861744-11861823)
chr8 (499-538)||(32975997-32976036)
chr8 (431-470)||(40980999-40981038)
chr8 (228-290)||(41799978-41800041)
chr8 (507-592)||(10114435-10114519)
chr8 (485-570)||(16825599-16825684)
chr8 (477-522)||(27028754-27028799)
chr8 (507-567)||(4558743-4558803)
chr8 (507-579)||(16736029-16736101)
chr8 (423-467)||(29819045-29819089)
chr8 (51-107)||(41800168-41800224)
[»] chr6 (30 HSPs)
chr6 (431-581)||(24626164-24626314)
chr6 (477-591)||(8147618-8147731)
chr6 (449-586)||(18076083-18076220)
chr6 (428-592)||(6538383-6538542)
chr6 (477-579)||(6909925-6910028)
chr6 (505-580)||(4163118-4163193)
chr6 (505-580)||(4224739-4224814)
chr6 (489-603)||(31623487-31623601)
chr6 (451-552)||(35070710-35070812)
chr6 (483-579)||(6200480-6200576)
chr6 (427-515)||(34430581-34430669)
chr6 (542-629)||(6536595-6536682)
chr6 (507-581)||(9093607-9093681)
chr6 (455-534)||(30926431-30926510)
chr6 (503-568)||(18690435-18690501)
chr6 (507-581)||(20368231-20368305)
chr6 (477-559)||(30536393-30536475)
chr6 (499-553)||(30536637-30536691)
chr6 (431-492)||(264250-264311)
chr6 (528-581)||(415270-415323)
chr6 (507-564)||(2206535-2206592)
chr6 (507-584)||(2735014-2735091)
chr6 (499-580)||(8201170-8201251)
chr6 (507-552)||(9559621-9559666)
chr6 (499-581)||(35098972-35099056)
chr6 (431-487)||(658580-658636)
chr6 (433-493)||(2455145-2455205)
chr6 (460-592)||(6016415-6016547)
chr6 (544-592)||(11784070-11784118)
chr6 (515-563)||(28621179-28621227)
[»] scaffold0018 (1 HSPs)
scaffold0018 (427-539)||(157972-158084)
[»] chr5 (49 HSPs)
chr5 (179-296)||(278604-278722)
chr5 (499-606)||(16458005-16458111)
chr5 (428-557)||(3735566-3735695)
chr5 (427-567)||(32372489-32372629)
chr5 (499-581)||(34102365-34102448)
chr5 (499-566)||(35445992-35446059)
chr5 (433-586)||(24030447-24030601)
chr5 (503-559)||(3932758-3932814)
chr5 (525-616)||(16937899-16937990)
chr5 (426-581)||(25460956-25461110)
chr5 (501-616)||(29925780-29925895)
chr5 (434-552)||(7319091-7319209)
chr5 (515-592)||(32009645-32009722)
chr5 (433-539)||(12554334-12554440)
chr5 (433-567)||(26005303-26005437)
chr5 (503-556)||(9107053-9107106)
chr5 (425-530)||(7706078-7706186)
chr5 (436-488)||(19460520-19460572)
chr5 (457-569)||(34669790-34669902)
chr5 (499-555)||(42500302-42500358)
chr5 (459-586)||(1130866-1130992)
chr5 (433-560)||(10639825-10639951)
chr5 (427-534)||(25461853-25461960)
chr5 (499-586)||(36227732-36227819)
chr5 (371-425)||(278823-278877)
chr5 (485-539)||(2973612-2973665)
chr5 (432-538)||(13697853-13697959)
chr5 (499-581)||(25461698-25461779)
chr5 (477-538)||(32009905-32009967)
chr5 (432-567)||(40426632-40426770)
chr5 (526-607)||(6587132-6587213)
chr5 (507-580)||(14932235-14932307)
chr5 (509-566)||(42569046-42569103)
chr5 (485-581)||(6521028-6521123)
chr5 (507-567)||(12425516-12425576)
chr5 (477-629)||(12857341-12857492)
chr5 (544-579)||(12554501-12554536)
chr5 (505-539)||(39594751-39594785)
chr5 (527-565)||(42582760-42582798)
chr5 (425-484)||(3569097-3569153)
chr5 (507-552)||(7674593-7674638)
chr5 (431-492)||(9202878-9202939)
chr5 (507-580)||(12595503-12595576)
chr5 (449-538)||(35299624-35299713)
chr5 (527-564)||(41819577-41819614)
chr5 (541-597)||(27298053-27298108)
chr5 (507-539)||(28776920-28776952)
chr5 (525-579)||(29815140-29815191)
chr5 (506-566)||(32022015-32022075)
[»] scaffold0024 (2 HSPs)
scaffold0024 (507-558)||(21352-21403)
scaffold0024 (508-558)||(58883-58933)


Alignment Details
Target: chr3 (Bit Score: 525; Significance: 0; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 525; E-Value: 0
Query Start/End: Original strand, 34 - 629
Target Start/End: Complemental strand, 24685432 - 24684825
Alignment:
Q  34 agcagagagaattaaggaaaaagacctaggagctcgactgaggtagacaaacaaaagccgtgaatcttctaaatgttgcacttaccactgtttttctctc 133  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  24685432 agcagagagaattcaggaaaaagacctaggagctcgactgaggtagacaaacaaaagccgcgaatcttctaaatgttgcacttaccactgtttttctctc 24685333  T
Q  134 tctttttcctgcacagtttatggtttatgt----------gagattcttctggttatttgattttataggtccccaagaacaagaggaatgttaaatgca 223  Q
    |||||||||||||||||||||||||| |||          ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24685332 tctttttcctgcacagtttatggtttgtgtttgattttgtgagattcttctggttatttgattttataggtccccaagaacaagaggaatgttaaatgca 24685233  T
Q  224 tgaagaatatgagatgtggttttataagcacagaa-agaatacaagtcctggttctcaagatcagaccttaagcagttctacagttatgtggaggtgcat 322  Q
    ||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24685232 tgaagaatatgagatgtggttttataagcacagaagagaatacaggtcctggttctcaagatcagaccttaagcagttctacagttatgtggaggtgcat 24685133  T
Q  323 cttcaagtttgagtcagaacaattctacagctctgaagttaagcggccaatcaatatctagtagaggtcctgctactgatccagatagtctctattcaag 422  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24685132 cttcaagtttgagtcagaacaattctacagctctgaagttaagcggccaatcaatatctagtagaggtcctgctactgatccagatagtctctattcaag 24685033  T
Q  423 agttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttata 522  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  24685032 agttagggcctgtttggatagacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcataagtttacataagctatttttata 24684933  T
Q  523 gaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcg-aaaaaatcttg 621  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||    
T  24684932 gaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataagacgaaaaaaatcttg 24684833  T
Q  622 tgcaaatt 629  Q
    ||||||||    
T  24684832 tgcaaatt 24684825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 433 - 570
Target Start/End: Complemental strand, 30956825 - 30956688
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    ||||||||||||| | ||||||||||||||||||||||   || ||||||||||||  || |||| ||||||||||||||||||| ||||| ||||||||    
T  30956825 tgtttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagata 30956726  T
Q  533 aaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||| || ||||||||||||||| |||||||||||    
T  30956725 aaataaagttaaattgtttttgtataggctataagttg 30956688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 433 - 570
Target Start/End: Complemental strand, 30972637 - 30972500
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    ||||||||||||| | ||||||||||||||||||||||   || ||||||||||||  || |||| ||||||||||||||||||| ||||| ||||||||    
T  30972637 tgtttggataaacagcttatttgcagcttatagcacaagggcttatcatgataagcatttatgcataagcttacataagctatttctatagcaaaagata 30972538  T
Q  533 aaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||| || ||||||||||||||| |||||||||||    
T  30972537 aaataaagttaaattgtttttgtataggctataagttg 30972500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 428 - 586
Target Start/End: Complemental strand, 35959660 - 35959502
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    |||| ||||||||||||| | |||||||||||||||| |||||  ||| ||||||||||| |||| || | ||||| ||||||||||||| |||||||||    
T  35959660 gggcttgtttggataaacagcttatttgcagcttatatcacaagctcttatcatgataagagcttatgtataagctcacataagctatttctatagaaaa 35959561  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
     ||||||||||| || |||| |||||||||||||| ||||||| || ||||||| ||||    
T  35959560 ggataaaataaagttaaattatttttgtatatgctgtaagttgtttctataagctatat 35959502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 157 - 297
Target Start/End: Complemental strand, 24653574 - 24653433
Alignment:
Q  157 tttatgtgagattcttctggttatttgattttataggtccccaagaacaagaggaatgttaaatgcatgaagaatatgagatgtggttttataagcac-a 255  Q
    |||||| |||||||| |||||| |||||||||||||||||  |||||  |||||||||||||||| | |||||| ||||||||||||| | |||||||      
T  24653574 tttatgcgagattctcctggttctttgattttataggtccgaaagaaagagaggaatgttaaatgtaggaagaacatgagatgtggttctgtaagcactt 24653475  T
Q  256 gaaagaatacaagtcctggttctcaagatcagaccttaagca 297  Q
    || |||||||||||||||||||||| ||||||||||||||||    
T  24653474 gagagaatacaagtcctggttctcaggatcagaccttaagca 24653433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 161 - 295
Target Start/End: Complemental strand, 24631893 - 24631760
Alignment:
Q  161 tgtgagattcttctggttatttgattttataggtccccaagaacaagaggaatgttaaatgcatgaagaatatgagatgtggttttataagcacagaa-a 259  Q
    ||||||||| | | ||||||||||||||||  ||||| ||||||||||||||  ||||||| |||||||||||||||| ||||| ||||| |||| || |    
T  24631893 tgtgagattatcccggttatttgattttattagtcccaaagaacaagaggaa--ttaaatgtatgaagaatatgagatttggttctataatcacaaaaga 24631796  T
Q  260 gaatacaagtcctggttctcaagatcagaccttaag 295  Q
     ||||||||||||||||| |  ||||||||||||||    
T  24631795 aaatacaagtcctggttcgccggatcagaccttaag 24631760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 428 - 607
Target Start/End: Original strand, 20880343 - 20880521
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||||||||||||| ||   |||||||||| |||||||||||    | ||||| ||||| |||| || | ||||||||||||||||||||||||| |||    
T  20880343 gggcctgtttggatagacaacttatttgcagtttatagcacaagcggttatcataataagtgcttatgtataagcttacataagctatttttatagcaaa 20880442  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
     |||||||  || || |||||||||||||||||||||||  || ||||| |||| |||| ||||| |||  |||||||||    
T  20880443 tgataaaa-caagttaaattgtttttgtatatgctataaactgtttttaaaagctatattggagaacttatgaaaataag 20880521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 428 - 576
Target Start/End: Original strand, 20170389 - 20170537
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||||||| ||| ||||   |||||||||| ||||| ||||| | ||  ||||||||||||||| || |  ||||| || ||||||||||||  | |||    
T  20170389 gggcctgttgggagaaacaacttatttgcagtttatatcacaactgcttttcatgataagcgcttatgtatcagcttgcacaagctatttttactgcaaa 20170488  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    |||||||||||  || ||||||||||||||||||||||||||| |||||    
T  20170489 agataaaataatgttaaattgtttttgtatatgctataagttgttttta 20170537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 163 - 292
Target Start/End: Complemental strand, 24682552 - 24682419
Alignment:
Q  163 tgagattcttctggttatttgattttataggtccccaagaacaagagg---aatgttaaatgcatgaagaatatgagatgtggttttataagcacagaa- 258  Q
    ||||||||| |||||| |||||||||||||||||  |||||  |||||   ||||||||||| | |||||| ||||||||||||| | |||||||  ||     
T  24682552 tgagattctcctggttctttgattttataggtccgaaagaaagagaggaataatgttaaatgtaggaagaacatgagatgtggttctgtaagcacttaag 24682453  T
Q  259 agaatacaagtcctggttctcaagatcagacctt 292  Q
    ||||||||||| |||||||||| |||||||||||    
T  24682452 agaatacaagtgctggttctcaggatcagacctt 24682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 449 - 616
Target Start/End: Original strand, 39980616 - 39980783
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    ||||||||||||||||| |||||  || |||||||||||| ||| || | ||| || ||| |||| ||||||||| | || ||| |||||  || |||||    
T  39980616 ttatttgcagcttataggacaaacacttatcatgataagcacttatgtataagtttgcattagctttttttatagcagaacatacaataacgttaaattg 39980715  T
Q  549 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    |||||| | ||||||||||||| |||||||||| |||| ||||| |||  |||||||||  |||||||    
T  39980716 tttttgaacatgctataagttgtttttataagctatattggagaacttatgaaaataagttgaaaaaa 39980783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 450 - 592
Target Start/End: Complemental strand, 12862429 - 12862288
Alignment:
Q  450 tatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgt 549  Q
    ||||||||| |||||||| ||   || || ||||||||| ||| ||   |||||| ||||| |||||||||||| ||||||||||||| |||| |||||     
T  12862429 tatttgcaggttatagcaaaagcgcttataatgataagcacttatgtttaagcttgcataatctatttttatagcaaaagataaaatagatttaaattg- 12862331  T
Q  550 ttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||||||||||||| ||| |||||| |||| |||||    
T  12862330 ttttgtatatgctataagttgttttcataagctatattggaga 12862288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 570
Target Start/End: Complemental strand, 53789662 - 53789523
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    ||||||||| ||||||  ||| |||||||||||  |||||   || |||||||||||| ||| ||   ||||||||||||||||||| ||||| ||||||    
T  53789662 cctgtttgggtaaacgacttaattgcagcttatgccacaagcgcttatcatgataagcacttatgtgtaagcttacataagctatttctataggaaaaga 53789563  T
Q  531 taaaataaattttaattgtttttgtatatgctataagttg 570  Q
    | || |||| || || |||||| |||||||||||||||||    
T  53789562 tgaactaaaattaaaatgttttggtatatgctataagttg 53789523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 425 - 563
Target Start/End: Complemental strand, 3845769 - 3845631
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttataga 524  Q
    ||||| |||||||||||||||   |||||||||| | |||||||||   || ||  | ||||| ||||||| | ||||||||||||||||||| ||||||    
T  3845769 ttaggccctgtttggataaacaacttatttgcagttcatagcacaagcacttattgtaataagtgcttttgtataagcttacataagctatttctataga 3845670  T
Q  525 aaaagataaaataaattttaattgtttttgtatatgcta 563  Q
     ||||||||||| || || || ||||||| |||||||||    
T  3845669 gaaagataaaattaagttgaaatgtttttctatatgcta 3845631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 499 - 581
Target Start/End: Original strand, 21335612 - 21335694
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||| |||||||| |||||||||||||||||||||||| |||| |||||||||||||| || |||| || ||| ||||||    
T  21335612 aagcttaaataagctaattttatagaaaaagataaaataaagtttagttgtttttgtatattctgtaagctgttttcataagc 21335694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 508 - 616
Target Start/End: Complemental strand, 36631175 - 36631067
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    |||||||||| ||||| ||| |||||| |||| || ||||||||||||| ||||||||||||| |||||| ||| |||| ||||| |||  |||||||||    
T  36631175 taagctatttctatagtaaaggataaagtaaagttaaattgtttttgtacatgctataagttgtttttatgagctatattggagaacttatgaaaataag 36631076  T
Q  608 gcgaaaaaa 616  Q
      |||||||    
T  36631075 cagaaaaaa 36631067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 449 - 552
Target Start/End: Complemental strand, 46778410 - 46778307
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    ||||||||| ||||||| |||||  || |||||||||||||||| || |  |||||| ||||||||||| ||||| || |||||||||||| || |||||    
T  46778410 ttatttgcaccttatagtacaaacacttatcatgataagcgcttatgtatcagcttatataagctatttctatagcaagagataaaataaagttaaattg 46778311  T
Q  549 tttt 552  Q
    ||||    
T  46778310 tttt 46778307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 499 - 569
Target Start/End: Original strand, 583983 - 584053
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    ||||||||||||| ||||| ||||||||| ||||||||||| || ||||||||||||  ||||||||||||    
T  583983 aagcttacataagttatttctatagaaaatgataaaataaagttaaattgtttttgttcatgctataagtt 584053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 434 - 552
Target Start/End: Original strand, 2719341 - 2719459
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataa 533  Q
    ||||| |||||| | |||||| ||||||||||||||||  || |||||||||||| |||  ||| ||||||||| ||||||||| || || |||| ||||    
T  2719341 gtttgaataaacagcttatttacagcttatagcacaaacgcttatcatgataagcacttacgcataagcttacacaagctatttctaaagcaaaatataa 2719440  T
Q  534 aataaattttaattgtttt 552  Q
    |||||| |  |||||||||    
T  2719441 aataaagtgaaattgtttt 2719459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 29520658 - 29520530
Alignment:
Q  452 tttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgttt 551  Q
    |||||||||||||||| |||  || ||||| |||||| ||| || | |||||| ||||||||| |||||||| |||||| |||||||  || |||||||     
T  29520658 tttgcagcttatagcataaacacttatcataataagcacttatgtataagcttgcataagcta-ttttatagcaaaagagaaaataacgttaaattgttc 29520560  T
Q  552 ttgtatatgctataagttgcttttataagc 581  Q
    || ||  |||||||||||| ||||||||||    
T  29520559 ttctaattgctataagttgtttttataagc 29520530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 434 - 537
Target Start/End: Complemental strand, 1508779 - 1508675
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagcta-tttttatagaaaaagata 532  Q
    ||||||| |||| | ||||||||| |||||||||||| | || |||||||||||||||| || | |||||| ||||| ||| |||||| || ||||||||    
T  1508779 gtttggaaaaacagcttatttgcaacttatagcacaagtgcttatcatgataagcgcttatgtataagcttgcataaactattttttaaagcaaaagata 1508680  T
Q  533 aaata 537  Q
    |||||    
T  1508679 aaata 1508675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 10704711 - 10704639
Alignment:
Q  494 tgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||| |||||||||||||||| |||||||| |||||||||||| |  || |||||||||||||| ||||||||    
T  10704711 tgcataagcttacataagctacttttatagcaaaagataaaatgatgttaaattgtttttgtatttgctataa 10704639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 592
Target Start/End: Complemental strand, 49034382 - 49034303
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||| |||||||||||||   || |||||||| || ||||||||||||||| |||||||||| |||| |||||    
T  49034382 tatttttatagcaaaagataaaataccgttaaattgtttgtgcatatgctataagttgtttttataagctatattggaga 49034303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 319 - 425
Target Start/End: Complemental strand, 24653382 - 24653276
Alignment:
Q  319 gcatcttcaagtttgagtcagaacaattctacagctctgaagttaagcggccaatcaatatctagtagaggtcctgctactgatccagatagtctctatt 418  Q
    |||| |||||||||||| ||||| | |||||||||| |||| ||||| ||| |||||| ||||||||| |||||  || |||||||| | || ||||||     
T  24653382 gcattttcaagtttgagccagaaaatttctacagctatgaacttaagtggcaaatcaagatctagtagtggtccctctgctgatccacagagcctctata 24653283  T
Q  419 caagagt 425  Q
    |||||||    
T  24653282 caagagt 24653276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 527 - 629
Target Start/End: Original strand, 30443858 - 30443960
Alignment:
Q  527 aagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaa 626  Q
    |||||||||| || || ||||| |||||||||||||||||| || |||||||| | |||| ||||| |||  |||||||||  ||||||| |||||| ||    
T  30443858 aagataaaatgaagttaaattgcttttgtatatgctataagctgtttttataaactatattggagaacttatgaaaataagctgaaaaaagcttgtgaaa 30443957  T
Q  627 att 629  Q
    |||    
T  30443958 att 30443960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 452 - 581
Target Start/End: Original strand, 5331184 - 5331312
Alignment:
Q  452 tttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgttt 551  Q
    |||||||||||||||| |||  || || || |||||| ||| || | |||||| ||||||||||||| |||| |||||| |||||||  || |||||||     
T  5331184 tttgcagcttatagcataaacacttatgataataagcacttatgtataagcttgcataagctatttt-atagcaaaagagaaaataacgttaaattgttc 5331282  T
Q  552 ttgtatatgctataagttgcttttataagc 581  Q
    || ||  |||||||||||| ||||||||||    
T  5331283 ttctaattgctataagttgtttttataagc 5331312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 485 - 581
Target Start/End: Complemental strand, 18405979 - 18405882
Alignment:
Q  485 aagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaa-ttgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||| || | ||||||||||||| ||||| ||||| |||||||||||||   || || || |||||||||||||||||||||| ||| ||||||    
T  18405979 aagcgcttatgtataagcttacataagttatttatataggaaaagataaaatatcgttgaatttttttttgtatatgctataagttgttttcataagc 18405882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 435 - 568
Target Start/End: Original strand, 19983653 - 19983785
Alignment:
Q  435 tttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaa 534  Q
    |||||||||||   |||||||||  |||||||| || |  | || |||||||||| || || | ||||||||||||| ||||| ||||||||||||| ||    
T  19983653 tttggataaacaacttatttgcaatttatagcataattgtttattatgataagcgtttatgtataagcttacataagttatttctatagaaaaagat-aa 19983751  T
Q  535 ataaattttaattgtttttgtatatgctataagt 568  Q
    ||||| ||||||| |||||  |||||||| ||||    
T  19983752 ataaagtttaattatttttacatatgctacaagt 19983785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 505 - 577
Target Start/End: Original strand, 37689176 - 37689246
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttat 577  Q
    ||||||||||||| ||||| |||||||||||||||    |||||||||||||||||||||| |||| ||||||    
T  37689176 acataagctatttctatagcaaaagataaaataaa--gaaattgtttttgtatatgctataggttgtttttat 37689246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 566
Target Start/End: Original strand, 849599 - 849666
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||||||||||||  |||| ||| | ||||||||||||||| || ||||||||||| |||||||||||    
T  849599 aagcttacataagtcatttctatcggaaaagataaaataaagttaaattgtttttgaatatgctataa 849666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 570
Target Start/End: Complemental strand, 44061148 - 44061085
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||| ||||| ||||||||||||||  || |||||||||| |||| |||||||||||    
T  44061148 ataagctatttctatagcaaaagataaaataaggttaaattgtttttctataagctataagttg 44061085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 566
Target Start/End: Complemental strand, 25447364 - 25447310
Alignment:
Q  512 ctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||||| ||||| ||||||||||||||| || ||||||||||||||| |||||||    
T  25447364 ctatttctatagtaaaagataaaataaacttaaattgtttttgtataagctataa 25447310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 431 - 513
Target Start/End: Complemental strand, 31365473 - 31365391
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagct 513  Q
    ||||| ||||||||| | |||||||||||||||||||||| |  | |||||||||||| ||| || | |||||| ||||||||    
T  31365473 cctgtgtggataaacagcttatttgcagcttatagcacaagtgattatcatgataagcacttatgtataagcttgcataagct 31365391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 506 - 567
Target Start/End: Complemental strand, 16073169 - 16073108
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||||||||| ||||| ||||| |||||| ||||| ||| ||||||||||||| ||||||    
T  16073169 cataagctatttctatagcaaaagttaaaattaatttaaatagtttttgtatatgttataag 16073108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 525 - 606
Target Start/End: Original strand, 36189529 - 36189610
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataa 606  Q
    ||||||||||||||| || ||||||||||||||||| |||||| |  |||||||||  |||| ||||| |||  ||||||||    
T  36189529 aaaagataaaataaagttaaattgtttttgtatatgatataagctatttttataagatatattggagaacttatgaaaataa 36189610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 579
Target Start/End: Complemental strand, 402666 - 402595
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||||||||| ||||||||||||| || ||||||| ||||||||| ||||| | |||||| || ||||||||    
T  402666 ataagctatttctatagaaaaagat-aattaaatttaaattgttttcgtataagttataagctgtttttataa 402595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 570
Target Start/End: Complemental strand, 8142835 - 8142774
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||||||||  ||||||||||||||||||  |||  |||||||||||| ||||||||    
T  8142835 ataagctatttttatatcaaaagataaaataaattt--attagttttgtatatgccataagttg 8142774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 532 - 592
Target Start/End: Original strand, 20257505 - 20257565
Alignment:
Q  532 aaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||||| || ||||||||||||||||||||||||||| ||||  |||| |||| |||||    
T  20257505 aaaataaagttaaattgtttttgtatatgctataagttgttttttgaagctatattggaga 20257565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 544 - 592
Target Start/End: Original strand, 47132313 - 47132361
Alignment:
Q  544 aattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||||||||||||||||||| |||| |||||||||| |||| |||||    
T  47132313 aattgtttttgtatatgctataggttgtttttataagctatattggaga 47132361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 569
Target Start/End: Original strand, 14145877 - 14145919
Alignment:
Q  527 aagataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    ||||||||||||| || ||||||||| ||||||||||||||||    
T  14145877 aagataaaataaagttaaattgttttcgtatatgctataagtt 14145919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 528
Target Start/End: Complemental strand, 42545527 - 42545498
Alignment:
Q  499 aagcttacataagctatttttatagaaaaa 528  Q
    ||||||||||||||||||||||||||||||    
T  42545527 aagcttacataagctatttttatagaaaaa 42545498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 426 - 471
Target Start/End: Complemental strand, 42747957 - 42747912
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaa 471  Q
    |||| ||||||||||||||| | ||||||||| |||||||||||||    
T  42747957 taggccctgtttggataaacagcttatttgcaacttatagcacaaa 42747912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 563
Target Start/End: Complemental strand, 53494046 - 53493985
Alignment:
Q  502 cttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgcta 563  Q
    ||||||||| |||||||||||| ||||| |||||| || ||  ||||||||| |||||||||    
T  53494046 cttacataacctatttttatagtaaaaggtaaaattaaattacattgtttttatatatgcta 53493985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 471
Target Start/End: Original strand, 849551 - 849591
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaa 471  Q
    |||||||||||||||   |||||||||||||||||||||||    
T  849551 cctgtttggataaacaacttatttgcagcttatagcacaaa 849591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 566
Target Start/End: Original strand, 1141153 - 1141213
Alignment:
Q  507 ataagctatttttatagaaaaagataaaata-aattttaattgtttttgtatatgctataa 566  Q
    ||||| |||||||||  |||||||||||||| ||||| ||||| ||||||||||| |||||    
T  1141153 ataagttatttttatgaaaaaagataaaatataatttaaattgcttttgtatatgttataa 1141213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 471
Target Start/End: Complemental strand, 3846082 - 3846042
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaa 471  Q
    ||||||||||||||| | ||||||| |||||||||||||||    
T  3846082 cctgtttggataaacagcttatttgtagcttatagcacaaa 3846042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 558
Target Start/End: Complemental strand, 34638090 - 34638038
Alignment:
Q  507 ataagctatttttatagaaaaagataaaa-taaattttaattgtttttgtata 558  Q
    ||||||||||| ||||||||||||||||| |||| || ||||||||| |||||    
T  34638090 ataagctatttctatagaaaaagataaaattaaagttaaattgttttcgtata 34638038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 550
Target Start/End: Complemental strand, 39602335 - 39602291
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtt 550  Q
    |||||||||||| ||||||||||||||| ||||| || |||||||    
T  39602335 cataagctatttctatagaaaaagataacataaagttaaattgtt 39602291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 78; Significance: 5e-36; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 434 - 567
Target Start/End: Original strand, 12795664 - 12795797
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataa 533  Q
    |||||||||||| |||||||||||| |||||||| || | || |||||||||||| ||||| || |||||||||||||||||||| |||||||| ||| |    
T  12795664 gtttggataaacagtttatttgcagtttatagcataagtgcttatcatgataagcactttttcataagcttacataagctattttgatagaaaaggatta 12795763  T
Q  534 aataaattttaattgtttttgtatatgctataag 567  Q
    | ||||||||||||||| ||||||||||||||||    
T  12795764 agtaaattttaattgttcttgtatatgctataag 12795797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 449 - 607
Target Start/End: Original strand, 32592474 - 32592631
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    ||||||| |||||||||||||||  || ||||| |||||||||| || | |||||| ||||| |||||||||||||||||||||||||||  || |||||    
T  32592474 ttatttgtagcttatagcacaaacacttatcattataagcgcttatgtataagcttgcataaactatttttatagaaaaagataaaataatgttaaattg 32592573  T
Q  549 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
     ||||||||| ||||||||||| ||||||||||||||| ||||| |||  |||||||||    
T  32592574 -ttttgtatacgctataagttgtttttataagcaatattggagaacttatgaaaataag 32592631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 432 - 623
Target Start/End: Complemental strand, 12464673 - 12464482
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat 531  Q
    |||||||||||||||| ||||||| |||||||| | ||    || ||||||||||| || | || | ||||||||||||||||||| | |||||||||||    
T  12464673 ctgtttggataaacggcttatttgtagcttataacgcacgcacttatcatgataagtgcatatgtagaagcttacataagctatttctgtagaaaaagat 12464574  T
Q  532 aaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtg 623  Q
    |||||||| || |||||||||||||||||||||||| |  ||| |||||| || | ||||| |||| |||||||||  ||||||| ||||||    
T  12464573 aaaataaagttaaattgtttttgtatatgctataagctattttcataagctatcttggagaacttgtgaaaataagctgaaaaaagcttgtg 12464482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 580
Target Start/End: Original strand, 41407170 - 41407320
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    ||||||||||||||| | || |||||||||||||||||||   || |||||||||||| ||| || | ||||||||||||||||||| | ||  ||||||    
T  41407170 cctgtttggataaacagcttgtttgcagcttatagcacaagcgcttatcatgataagcacttatgtataagcttacataagctatttctgtaccaaaaga 41407269  T
Q  531 taaaataaattttaattg-tttttgtatatgctataagttgcttttataag 580  Q
    ||||||||| || ||||| |||||||||||||||||||||  |||||||||    
T  41407270 taaaataaagttaaattgttttttgtatatgctataagttatttttataag 41407320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 427 - 567
Target Start/End: Complemental strand, 42659356 - 42659216
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||||||||||||||||     |||||||||||| |||||||| |  || |||||||||||||||| || | ||||||||||||||||||||||| ||||    
T  42659356 agggcctgtttggataagaaacttatttgcagctaatagcacacacacttatcatgataagcgcttatgtataagcttacataagctatttttatggaaa 42659257  T
Q  527 aagataaaataaattttaattgtttttgtatatgctataag 567  Q
    | | ||||||||| |  ||||||||||||||||||||||||    
T  42659256 atggtaaaataaagtgaaattgtttttgtatatgctataag 42659216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 459 - 568
Target Start/End: Complemental strand, 41241305 - 41241196
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtata 558  Q
    ||||||||||||   || ||||||||| |||||| || | ||||||||||||||||||| ||||| |||||||||||| || || |||||||||||||||    
T  41241305 cttatagcacaagcacttatcatgatatgcgcttatggataagcttacataagctatttctataggaaaagataaaatgaagttaaattgtttttgtata 41241206  T
Q  559 tgctataagt 568  Q
    ||||||||||    
T  41241205 tgctataagt 41241196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 459 - 559
Target Start/End: Complemental strand, 42868634 - 42868534
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtata 558  Q
    ||||||||||||   || ||||||||| |||||| |||| ||| |||||||||||||||| |||||||||||||||||||| || |||||||||||||||    
T  42868634 cttatagcacaagcgcttatcatgataggcgcttatgcataagtttacataagctattttcatagaaaaagataaaataaagttaaattgtttttgtata 42868535  T
Q  559 t 559  Q
    |    
T  42868534 t 42868534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 629
Target Start/End: Complemental strand, 43279660 - 43279532
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttga 598  Q
    |||||| |||||||||||||||||  ||||||||||||||  |  ||||||||||||||  ||||||||||| |||||||||| |||| ||||| ||||     
T  43279660 aagcttgcataagctatttttatatcaaaagataaaataatgtgaaattgtttttgtat--gctataagttgtttttataagctatattggagaacttgt 43279563  T
Q  599 gaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    |||||||||  ||||||| ||| || |||||    
T  43279562 gaaaataagttgaaaaaagcttatgaaaatt 43279532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 429 - 581
Target Start/End: Complemental strand, 15757869 - 15757709
Alignment:
Q  429 ggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcg-------cttttgcacaagcttacataagctatttttat 521  Q
    ||||||||||||||||| | |||||| |||||||||||||||   || |||||||||||||       ||| || | ||||| ||||||||||| | ||     
T  15757869 ggcctgtttggataaacagcttattttcagcttatagcacaagcgcttatcatgataagcgataaaagcttatgtataagctcacataagctatatctaa 15757770  T
Q  522 agaaaaagataaaataaattttaattg-tttttgtatatgctataagttgcttttataagc 581  Q
    |||||| ||||||||||| || ||||| ||||||||||||||||||||||  |||||||||    
T  15757769 agaaaatgataaaataaagttaaattgttttttgtatatgctataagttgtatttataagc 15757709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 431 - 586
Target Start/End: Complemental strand, 39659709 - 39659555
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    |||||||||||||||   |||||||||||||| ||||||||| || |||||||||||||||| || | ||| ||  |||  ||| |||||||  ||||||    
T  39659709 cctgtttggataaacaacttatttgcagcttagagcacaaatgcttatcatgataagcgcttatgtataagtttggatacacta-ttttataacaaaaga 39659611  T
Q  531 taaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    || |||||  || |||||||||||| |||| ||||| ||| |||||||||| ||||    
T  39659610 tacaataacgttaaattgtttttgtctatgttataacttgtttttataagctatat 39659555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 435 - 570
Target Start/End: Original strand, 41851408 - 41851543
Alignment:
Q  435 tttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaa 534  Q
    |||||||||||   ||||||||||| ||||||||||   || |||||| ||| ||||| |  | |||||||||  || ||||| ||||| |||||||| |    
T  41851408 tttggataaacatcttatttgcagcatatagcacaagcgcttatcatgctaaacgcttatatataagcttacacgagatatttatataggaaaagataca 41851507  T
Q  535 ataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||| || |||||||||||||||||||||||||||    
T  41851508 ataaagttaaattgtttttgtatatgctataagttg 41851543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 427 - 570
Target Start/End: Original strand, 15305521 - 15305665
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcat-catgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    ||||||||||||||||||| | ||||||||| ||| ||||| ||    | || |||| |||| |||| || | |||||| |||||||||||||||||| |    
T  15305521 agggcctgtttggataaacagcttatttgcaacttttagcataagcgtttatacatggtaagtgcttgtgtataagcttgcataagctatttttatagca 15305620  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    || ||||||||||  || |||| ||||||||| ||||||||||||    
T  15305621 aatgataaaataatgttaaattatttttgtatttgctataagttg 15305665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 429 - 537
Target Start/End: Complemental strand, 23974693 - 23974585
Alignment:
Q  429 ggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaa 528  Q
    ||||||||||||||| | | ||||||| |||||||| ||||| |  | | || ||||||| ||| |||| |||||||| |||||||||||||||||||||    
T  23974693 ggcctgtttggataagcagcttatttggagcttatatcacaagtgataagcaagataagcacttatgcataagcttacttaagctatttttatagaaaaa 23974594  T
Q  529 gataaaata 537  Q
    || ||||||    
T  23974593 gacaaaata 23974585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 507 - 570
Target Start/End: Complemental strand, 42420419 - 42420356
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||||||||| ||||||||||||||  || ||||||||||||||||| |||||||||    
T  42420419 ataagctatttttatagcaaaagataaaataacgttaaattgtttttgtatatgatataagttg 42420356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 500 - 570
Target Start/End: Original strand, 2227104 - 2227174
Alignment:
Q  500 agcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    |||||||||||||||||| ||| | ||||||||||||||| |  |||||||||||| |||| |||||||||    
T  2227104 agcttacataagctatttctatggtaaaagataaaataaaataaaattgtttttgtgtatgttataagttg 2227174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 449 - 567
Target Start/End: Original strand, 3311931 - 3312049
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    |||||| ||||||||||||||| |  | ||||||| ||| |||| || | |||| |||||||||| |||||| || ||  ||||||||||| || |||||    
T  3311931 ttattttcagcttatagcacaagtgattatcatgaaaagtgcttatgtataagcatacataagctgtttttacagcaagggataaaataaagttgaattg 3312030  T
Q  549 tttttgtatatgctataag 567  Q
     |||||| |||||||||||    
T  3312031 gttttgtgtatgctataag 3312049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 517
Target Start/End: Original strand, 11863800 - 11863886
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctattt 517  Q
    ||||| |||||||||   |||||| ||||||| ||||||||  ||  ||||||||||||||| |||| |||||||||||||||||||    
T  11863800 cctgtctggataaacaacttattttcagcttacagcacaaacacttgtcatgataagcgcttatgcataagcttacataagctattt 11863886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 525 - 607
Target Start/End: Complemental strand, 39073796 - 39073714
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    ||||||||||||||  || |||||||||||||||||||||||||   |||||||||| |||| ||||| || | |||||||||    
T  39073796 aaaagataaaataacgttaaattgtttttgtatatgctataagtaatttttataagctatattggagaactagtgaaaataag 39073714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 422 - 487
Target Start/End: Complemental strand, 1633756 - 1633691
Alignment:
Q  422 gagttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataag 487  Q
    ||||| |||||||||||||||||| | ||||||||||||||||||| || | || |||||||||||    
T  1633756 gagttggggcctgtttggataaacagcttatttgcagcttatagcagaagtgcttatcatgataag 1633691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 451 - 566
Target Start/End: Complemental strand, 33319994 - 33319878
Alignment:
Q  451 atttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaat-aaattttaattgt 549  Q
    ||||||||||||||||||||   || ||| |||||| ||||| || | ||| |||||||| |||||||||||| ||| ||||| || ||| || || |||    
T  33319994 atttgcagcttatagcacaagcgcttatcctgataatcgcttatgtaaaagtttacataaactatttttatagtaaatgataacataaaagttaaactgt 33319895  T
Q  550 ttttgtatatgctataa 566  Q
    |||||||||| ||||||    
T  33319894 ttttgtatatactataa 33319878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 563
Target Start/End: Complemental strand, 41812223 - 41812159
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgcta 563  Q
    ||||||||||||||||||||||| | ||| | |||||| || || ||||||||||||||||||||    
T  41812223 aagcttacataagctatttttatggcaaatggtaaaatgaagttaaattgtttttgtatatgcta 41812159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 629
Target Start/End: Original strand, 26201925 - 26202095
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatag-aaaaagataaaataaattttaattgtttttgtat 557  Q
    ||||||||||||   || |||||||||||| ||| |  | |||||| |||||||||||||||||| ||| |||||||||||  || ||||| | | |||     
T  26201925 cttatagcacaagcgcttatcatgataagcccttatatataagcttgcataagctatttttatagcaaagagataaaataacgttaaattggtctcgta- 26202023  T
Q  558 atgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
     |||||||||||| |||||||||  |||| ||||| |||  |||||||||  ||||||| ||| || |||||    
T  26202024 ctgctataagttgtttttataagatatattggagaacttatgaaaataagttgaaaaaagcttatgaaaatt 26202095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 479 - 560
Target Start/End: Original strand, 45229429 - 45229510
Alignment:
Q  479 catgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatg 560  Q
    ||||||||| |||| || | ||| ||||||||||||||| ||||| ||| |||||||| |  || |||||||||||||||||    
T  45229429 catgataagtgcttatgtataagtttacataagctatttctatagcaaacgataaaatgaggttaaattgtttttgtatatg 45229510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 504 - 552
Target Start/End: Complemental strand, 10619343 - 10619295
Alignment:
Q  504 tacataagctatttttatagaaaaagataaaataaattttaattgtttt 552  Q
    ||||| |||||||||||||||||||||||||| ||| || |||||||||    
T  10619343 tacattagctatttttatagaaaaagataaaacaaagttaaattgtttt 10619295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 459 - 539
Target Start/End: Complemental strand, 22971690 - 22971611
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaa 539  Q
    |||||||||||||   | || ||||||||||||| || | ||||||| ||||||||||| ||||| |||||||||||||||    
T  22971690 cttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagctatttctatag-aaaagataaaataaa 22971611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 456 - 560
Target Start/End: Complemental strand, 31561929 - 31561825
Alignment:
Q  456 cagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgt 555  Q
    |||||||||||||||    | ||||||||||||||||    | ||||||||||||||||| | ||||  ||| ||||||||||| || |||||||||| |    
T  31561929 cagcttatagcacaagcgtttatcatgataagcgcttacatataagcttacataagctatatctataataaatgataaaataaagttaaattgttttttt 31561830  T
Q  556 atatg 560  Q
    |||||    
T  31561829 atatg 31561825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 554
Target Start/End: Original strand, 4026762 - 4026809
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttg 554  Q
    ||||||||||||||||| ||||||||||||||| || |||| ||||||    
T  4026762 ataagctatttttatagcaaaagataaaataaagttaaattatttttg 4026809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 12194888 - 12195019
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgttttt-gtatatgctataagttgcttttataagcaatatcggagatcttg 597  Q
    |||||| | |||||| ||| ||||| |||||||||||| |  || |||||||||| ||||||| |||| |||| || ||||||  |||| ||||| ||||    
T  12194888 aagcttgcttaagctgtttctataggaaaagataaaatgacattcaattgtttttggtatatgttataggttgtttatataagttatattggagaacttg 12194987  T
Q  598 agaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
     |||||||||  ||||||| ||| || |||||    
T  12194988 tgaaaataagttgaaaaaagcttatgaaaatt 12195019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 492
Target Start/End: Original strand, 43570297 - 43570356
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    ||||||| ||||| | ||||||||||||||||||||||   || ||||||||||||||||    
T  43570297 tgtttgggtaaacagcttatttgcagcttatagcacaagcacttatcatgataagcgctt 43570356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 575
Target Start/End: Complemental strand, 11201505 - 11201439
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttt 575  Q
    ||||| ||||||||  ||||||||||||||  |  |||||||||||||||| |||||||||| ||||    
T  11201505 aagctgtttttatattaaaagataaaataaggtaaaattgtttttgtatatactataagttgttttt 11201439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 567
Target Start/End: Original strand, 13325513 - 13325575
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||||||| |||||||||||| ||||||||||| || |||| |||| |||||  |||||||    
T  13325513 acataagctagttttatagaaaatgataaaataaagttaaattattttcgtatacactataag 13325575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 546 - 616
Target Start/End: Complemental strand, 27695681 - 27695611
Alignment:
Q  546 ttgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    ||||||||||||||| |||||| || |||||||||| |||| || || |||| ||||||||| | ||||||    
T  27695681 ttgtttttgtatatgatataagctgtttttataagctatattggggaacttgtgaaaataagccaaaaaaa 27695611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 525 - 575
Target Start/End: Complemental strand, 36114630 - 36114580
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgctttt 575  Q
    ||||||||||||||| || ||||||||||||||| || |||||||| ||||    
T  36114630 aaaagataaaataaagttaaattgtttttgtataagcaataagttgttttt 36114580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 536
Target Start/End: Original strand, 2195906 - 2195935
Alignment:
Q  507 ataagctatttttatagaaaaagataaaat 536  Q
    ||||||||||||||||||||||||||||||    
T  2195906 ataagctatttttatagaaaaagataaaat 2195935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 580
Target Start/End: Original strand, 10494613 - 10494686
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||| ||||||| || ||| ||||||||||| |  |||||||||||| |||| ||||||||| ||| |||||    
T  10494613 ataagcaatttttacagcaaatgataaaataaagtgaaattgtttttgtttatggtataagttgttttcataag 10494686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 614
Target Start/End: Original strand, 18066075 - 18066180
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataagg 608  Q
    ||||||||| || || |||| || ||||||| || |||||||||  |||| |||||||| || ||| |||||| || | ||||| ||| |||||||||||    
T  18066075 aagctatttctacagtaaaatatgaaataaagttaaattgttttcatataagctataagctgttttcataagctatcttggagaacttaagaaaataagg 18066174  T
Q  609 cgaaaa 614  Q
     |||||    
T  18066175 tgaaaa 18066180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 592
Target Start/End: Original strand, 28206212 - 28206297
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||||||||  |||||||||||  |  || |||| ||||| |||||| ||||| ||| |||||||||| |||| |||||    
T  28206212 ataagctatttttatatcaaaagataaaacgatgttaaattatttttttatatgttataaattgtttttataagctatattggaga 28206297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 459 - 559
Target Start/End: Complemental strand, 28330472 - 28330372
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctattt-ttatagaaaaagataaaataaattttaattgtttttgtat 557  Q
    ||||||||||||   || |||||||||||||| | |||| ||||||   |||||||||| || ||||||| | ||||||||| ||||||| |||||||||    
T  28330472 cttatagcacaagcacttatcatgataagcgcatatgcataagcttgtgtaagctatttgttttagaaaagg-taaaataaagtttaattatttttgtat 28330374  T
Q  558 at 559  Q
    ||    
T  28330373 at 28330372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 575
Target Start/End: Original strand, 36125126 - 36125191
Alignment:
Q  510 agctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttt 575  Q
    ||||||||| |||| |||||||||||||| ||  | |||||||||||| |||||||| ||| ||||    
T  36125126 agctattttaatagcaaaagataaaataatttcaacttgtttttgtatttgctataaattgttttt 36125191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 41812281 - 41812236
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    |||||||||||||||||||||   |||||||||| |||||||||||    
T  41812281 ttagggcctgtttggataaacaacttatttgcagtttatagcacaa 41812236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 529 - 570
Target Start/End: Complemental strand, 43199896 - 43199855
Alignment:
Q  529 gataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||| || ||||||||||||||| |||||||||||    
T  43199896 gataaaataaagttaaattgtttttgtataagctataagttg 43199855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 565
Target Start/End: Original strand, 3932289 - 3932353
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctata 565  Q
    ||||||||||| ||||| ||||| ||||||||||||||| || |||  |||| | ||||||||||    
T  3932289 gcttacataagttatttctatagcaaaagataaaataaagttaaataattttgggatatgctata 3932353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 435 - 503
Target Start/End: Complemental strand, 27695784 - 27695716
Alignment:
Q  435 tttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagct 503  Q
    |||||||||||   ||||||| |||||||||||||||  || ||||||||||||  || ||||||||||    
T  27695784 tttggataaacaacttatttgtagcttatagcacaaacacttatcatgataagcatttgtgcacaagct 27695716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 566
Target Start/End: Original strand, 40835478 - 40835538
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||||| | ||||||||||||||||||||| | | || |||||||||||||| || |||||    
T  40835478 cataaggtgtttttatagaaaaagataaaacagagttgaattgtttttgtatgtgatataa 40835538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 555
Target Start/End: Original strand, 42457893 - 42457941
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgt 555  Q
    |||| |||||| ||||| ||||||||||||||| || ||||||||||||    
T  42457893 ataatctatttctatagtaaaagataaaataaagttaaattgtttttgt 42457941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 581
Target Start/End: Complemental strand, 44439467 - 44439411
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||| |||||||||| || || |||||||||||| ||||||| ||| ||||||||||    
T  44439467 aaaatataaaataaagttaaactgtttttgtataagctataaattgtttttataagc 44439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 72; Significance: 2e-32; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 429 - 592
Target Start/End: Original strand, 41505554 - 41505716
Alignment:
Q  429 ggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaa 528  Q
    ||||||||||||||||| | |||||||||||||||||||||||  || || |||||||| |||| ||||   |||||||||||||||||||||||||||     
T  41505554 ggcctgtttggataaacagcttatttgcagcttatagcacaaacgcttatgatgataagtgcttatgcattggcttacataagctatttttatagaaaac 41505653  T
Q  529 gataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    | |||| |||| || ||||||||| ||||||| |||||| || |||||||||| |||| |||||    
T  41505654 g-taaattaaagttaaattgttttcgtatatgttataagctgtttttataagctatattggaga 41505716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 427 - 565
Target Start/End: Original strand, 37473264 - 37473402
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||||||||||||||||||   ||||||||||||||| |||||| |||| ||||||| |||| ||| || | ||||||||||||||||||||||||| ||    
T  37473264 agggcctgtttggataaacaacttatttgcagcttattgcacaagttcttatcatgacaagcacttatgtataagcttacataagctatttttatagcaa 37473363  T
Q  527 aagataaaataaattttaattgtttttgtatatgctata 565  Q
    | ||||||| ||| || | | |||| |||||||||||||    
T  37473364 atgataaaacaaagttaagtcgtttatgtatatgctata 37473402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 499 - 629
Target Start/End: Original strand, 47432033 - 47432162
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttga 598  Q
    ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||||||| || |||||||||  |||| | |||  ||      
T  47432033 aagcttacataagctatttttatagaaaaagataaaataaagttaaattgtttttgaatatgctataaggtg-ttttataagttatattgaagaatttat 47432131  T
Q  599 gaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    |||||||||  ||||||| |||||| |||||    
T  47432132 gaaaataagctgaaaaaagcttgtgaaaatt 47432162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 427 - 586
Target Start/End: Complemental strand, 14576858 - 14576699
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||||||||| ||||||||   |||||| |||||||||||||||  ||| |||||||||||| ||| |  | ||||| |  ||||||||||  |||| ||    
T  14576858 agggcctgttgggataaacatcttatttccagcttatagcacaagctcttatcatgataagcacttatttataagctcatgtaagctatttccatagtaa 14576759  T
Q  527 aagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    | ||||||||||| || ||||||||||||||||||||||| ||  |||||||||| ||||    
T  14576758 aggataaaataaagttaaattgtttttgtatatgctataatttttttttataagctatat 14576699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 586
Target Start/End: Complemental strand, 30582081 - 30581994
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    ||||||||||||| ||||||||||||||||||||||||||| || | |||||||||||||||||| ||| || |||||||||| ||||    
T  30582081 aagcttacataaggtatttttatagaaaaagataaaataaagttaacttgtttttgtatatgctacaagctgtttttataagctatat 30581994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 480 - 629
Target Start/End: Complemental strand, 37631711 - 37631562
Alignment:
Q  480 atgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||||||||||| | || ||||||||||||||||| |||||||| ||||||||||| ||  | |||||||||||| |||| ||| || || |||| |||    
T  37631711 atgataagcgcttatacataagcttacataagctatctttatagagaaagataaaatgaagctaaattgtttttgtgtatgatattagctgtttttgtaa 37631612  T
Q  580 gcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    || |||| ||||| |||  |||||||||  ||||||| |||||| |||||    
T  37631611 gctatattggagaacttatgaaaataagctgaaaaaagcttgtgaaaatt 37631562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 433 - 570
Target Start/End: Original strand, 51688576 - 51688713
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    |||||||||||||   ||||||||||||||||| |||| | || ||||||||||| | || |  | |||||||||| |||||||| | ||| ||||||||    
T  51688576 tgtttggataaacaacttatttgcagcttatagtacaagtgcttatcatgataagtgtttatatataagcttacatgagctatttatgtaggaaaagata 51688675  T
Q  533 aaataaattttaattgtttttgtatatgctataagttg 570  Q
    |||||||  | ||||||||||||| |||||||||||||    
T  51688676 aaataaagataaattgtttttgtacatgctataagttg 51688713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 483 - 629
Target Start/End: Original strand, 7861999 - 7862145
Alignment:
Q  483 ataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagca 582  Q
    |||||| ||| |||| ||||||  |||||||||||||||||||||||||||||| |   | |||||||||||| ||||||||||| || || |||||||     
T  7861999 ataagctcttatgcataagctttgataagctatttttatagaaaaagataaaatgatggtaaattgtttttgtctatgctataagctgtttctataagct 7862098  T
Q  583 atatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    |||||| ||| | | |||||||||| | || ||| |||||| |||||    
T  7862099 atatcgcagaacataagaaaataagccaaagaaagcttgtgaaaatt 7862145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 431 - 557
Target Start/End: Original strand, 14331658 - 14331784
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    ||||||| ||||||| | ||||||| ||||||||||||||   ||  ||||||||||| ||| || | ||||| ||||||||||||| || |||| ||||    
T  14331658 cctgtttagataaacagcttatttgaagcttatagcacaagcgcttctcatgataagcacttatgtataagctaacataagctatttctacagaacaaga 14331757  T
Q  531 taaaataaattttaattgtttttgtat 557  Q
    ||||||||| || ||||||||||||||    
T  14331758 taaaataaagttaaattgtttttgtat 14331784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 507 - 607
Target Start/End: Complemental strand, 17603512 - 17603409
Alignment:
Q  507 ataagctatttttatagaaaaagat---aaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaa 603  Q
    ||||||||||||| |||||||||||   |||||||  || ||||||||||||||||||||||||||| |||||||||| |||| ||||| |||  |||||    
T  17603512 ataagctatttttgtagaaaaagattaaaaaataacgttaaattgtttttgtatatgctataagttgtttttataagctatattggagaacttctgaaaa 17603413  T
Q  604 taag 607  Q
    ||||    
T  17603412 taag 17603409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 501 - 616
Target Start/End: Complemental strand, 24915182 - 24915067
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgaga 600  Q
    |||||||||| |||||| ||||| | ||||||||||||| || |||||||||||||||||||||||| || ||| ||||||  | | ||||| |||| ||    
T  24915182 gcttacataaactatttctatagcagaagataaaataaagttaaattgtttttgtatatgctataagctgttttcataagctgtcttggagaacttgtga 24915083  T
Q  601 aaataaggcgaaaaaa 616  Q
    |||||||  |||||||    
T  24915082 aaataagttgaaaaaa 24915067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 478 - 581
Target Start/End: Original strand, 27976511 - 27976614
Alignment:
Q  478 tcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttat 577  Q
    ||||||||||  ||| || | ||||||||||||||||||||||||| ||| |||  || ||| || ||||||||||||||||||||||||||| ||| ||    
T  27976511 tcatgataagtccttatgtataagcttacataagctatttttatagcaaatgattgaacaaagttaaattgtttttgtatatgctataagttgttttcat 27976610  T
Q  578 aagc 581  Q
    ||||    
T  27976611 aagc 27976614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 431 - 629
Target Start/End: Complemental strand, 1510510 - 1510313
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    ||||||||||||||| | ||||||| | ||||||||||||   || ||| |||||||| ||| |  | |||||| || |||||||||||| |  ||||||    
T  1510510 cctgtttggataaacagcttatttgtatcttatagcacaagcgcttatcttgataagcacttatatataagcttgcaaaagctatttttaaaacaaaaga 1510411  T
Q  531 taaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    |||| |||  || ||||||||||||||| | ||||||||| ||||||||||  ||| ||||| |||  |||||||||  ||||||| ||| || |||||    
T  1510410 taaa-taatgttcaattgtttttgtataggttataagttgtttttataagctctattggagaacttacgaaaataagttgaaaaaagcttatgaaaatt 1510313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 452 - 616
Target Start/End: Complemental strand, 3234203 - 3234031
Alignment:
Q  452 tttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaa------taaatttt-- 543  Q
    |||||| ||||||||||||   || |||||||||||||||| |  | |||| | |||||||||| || |||| |||||||||||      |||||| |      
T  3234203 tttgcaacttatagcacaagcgcttatcatgataagcgcttatatataagcgtgcataagctatattcatagcaaaagataaaacaacgttaaattgtta 3234104  T
Q  544 aattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    ||||||||||||||||||||||||||| |||||||||| |||| ||||| |||  |||||||||  |||||||    
T  3234103 aattgtttttgtatatgctataagttgtttttataagctatattggagaacttatgaaaataagtagaaaaaa 3234031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 504 - 586
Target Start/End: Original strand, 30581744 - 30581825
Alignment:
Q  504 tacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||||||||||||||||||||||| ||| ||||||| || |||||||||| |||||||||||||||  |||||||||| ||||    
T  30581744 tacataagctatttttatagaaaacgatgaaataaagttaaattgtttttttatatgctataagtt-tttttataagccatat 30581825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 428 - 581
Target Start/End: Complemental strand, 33541912 - 33541759
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||| ||||||||||||   |||||||||| ||||||||||| |  | |||||||||||||||| || | ||||||  ||||| |||||||||||  ||    
T  33541912 gggccagtttggataaacaacttatttgcagtttatagcacaagtgtttatcatgataagcgcttatgtataagcttgaataagatatttttatagctaa 33541813  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
     |||| ||| |  || |||| |||||||| ||||| ||||||| ||||||||||    
T  33541812 ggatataatgatgttaaattctttttgtacatgctctaagttgtttttataagc 33541759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 427 - 565
Target Start/End: Complemental strand, 44932137 - 44932002
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||||||||||||||||| |||| |||||||| |||| ||  ||  || |||||||||||| |||  | | |||||| ||||| |||| ||||||| ||    
T  44932137 agggcctgtttggataaacagtttgtttgcagcatataacattaacacttatcatgataagcacttaggtataagcttgcataaactatatttatagcaa 44932038  T
Q  527 aagataaaataaattttaattgtttttgtatatgctata 565  Q
    |||||||   ||| || ||||||||||||||||||||||    
T  44932037 aagataa---aaagttaaattgtttttgtatatgctata 44932002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 504 - 607
Target Start/End: Original strand, 13809940 - 13810043
Alignment:
Q  504 tacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaa 603  Q
    |||||||| ||||| | ||| ||||||||||||||| || ||||||||||||||||||||||  ||| |||||||| | ||||  |||| |||| |||||    
T  13809940 tacataagttatttctttagcaaaagataaaataaagttaaattgtttttgtatatgctatatattgtttttataaactatattagagaacttgtgaaaa 13810039  T
Q  604 taag 607  Q
    ||||    
T  13810040 taag 13810043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 564
Target Start/End: Complemental strand, 41195400 - 41195261
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    |||||||||||||||||||    ||||||||||||||||||||||   || ||| |||||| ||||| || | ||| |||||||| |||||||||||| |    
T  41195400 tagggcctgtttggataaataacttatttgcagcttatagcacaagcgcttatcctgataatcgcttatgtataagtttacataaactatttttatagta 41195301  T
Q  526 aaagataaaat-aaattttaattgtttttgtatatgctat 564  Q
    || ||||| || ||| || || ||||||||||||| ||||    
T  41195300 aatgataacataaaagttaaactgtttttgtatatactat 41195261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 508 - 581
Target Start/End: Complemental strand, 836463 - 836390
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||||  ||||||||||||||  | ||||||||||||||| ||||||||||  ||||||||||    
T  836463 taagctatttttatagtgaaagataaaataaaactaaattgtttttgtataagctataagttatttttataagc 836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 494 - 615
Target Start/End: Complemental strand, 34795563 - 34795442
Alignment:
Q  494 tgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagat 593  Q
    |||| ||||||| ||||||||||||||| ||||||||||||||| | ||||||||| | |||||| | |||| | || |||||| ||| |||| |||||     
T  34795563 tgcataagcttagataagctatttttattgaaaaagataaaatagagtttaattgtctatgtatacgttatatgctgtttttattagctatattggagaa 34795464  T
Q  594 cttgagaaaataaggcgaaaaa 615  Q
    |||  ||||||||  |||||||    
T  34795463 cttatgaaaataaaccgaaaaa 34795442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 477 - 607
Target Start/End: Original strand, 2295019 - 2295141
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    ||||||||||| |||| |||| ||||||||||||||||||| |||||||||||  ||||     || |||||||||||||||||||   || |  |||||    
T  2295019 atcatgataagtgcttatgcataagcttacataagctatttctatagaaaaagccaaaa-----ttaaattgtttttgtatatgct---agctattttta 2295110  T
Q  577 taagcaatatcggagatcttgagaaaataag 607  Q
    ||||| ||||| |||| |||| |||||||||    
T  2295111 taagctatatcagagaacttgtgaaaataag 2295141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 607
Target Start/End: Original strand, 42174775 - 42174900
Alignment:
Q  480 atgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    |||||||| |||| || | |||||| |||| ||||||||||||  |||||||||| |||  || ||  ||||||||||||||||||||||| ||||||||    
T  42174775 atgataagggcttatgtataagcttgcataggctatttttatatcaaaagataaagtaatgttaaa--gtttttgtatatgctataagttgtttttataa 42174872  T
Q  580 gcaatatcggagatcttgagaaaataag 607  Q
    |  |||| ||||| |||  |||||||||    
T  42174873 gttatattggagaacttatgaaaataag 42174900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 514 - 569
Target Start/End: Original strand, 15477530 - 15477585
Alignment:
Q  514 atttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    |||| ||||| ||||||||||||||| || ||||||||||||||||||||||||||    
T  15477530 atttctatagtaaaagataaaataaagttaaattgtttttgtatatgctataagtt 15477585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 501 - 592
Target Start/End: Original strand, 26678842 - 26678933
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||| ||||| ||||||||| || ||||||||||||||| ||  ||||||| |||| |||||||||||||  ||||||||| | ||||||||    
T  26678842 gcttgcataaactatttttacagcaaaagataaaataaagttacattgtttatgtaaatgctataagttgtatttataagctacatcggaga 26678933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 562
Target Start/End: Original strand, 45145171 - 45145226
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgct 562  Q
    ||||||||||||||||| ||||||||||||||  || |||||||||||||||||||    
T  45145171 ataagctatttttatagcaaaagataaaataatattaaattgtttttgtatatgct 45145226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 614
Target Start/End: Original strand, 49888712 - 49888819
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataa 606  Q
    ||||||||||| | | ||||||||||||||||| |||||||||||| ||||| ||||| ||||| ||| |||||| || |  |||| |||  ||||||||    
T  49888712 ataagctatttctttggaaaaagataaaataaagtttaattgttttcgtataagctattagttgttttcataagctatcttagagaacttatgaaaataa 49888811  T
Q  607 ggcgaaaa 614  Q
    | ||||||    
T  49888812 gccgaaaa 49888819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 586
Target Start/End: Original strand, 18556821 - 18556950
Alignment:
Q  456 cagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgt 555  Q
    |||||||||||||||   || ||| |||  ||||||| || | ||||||  ||||||||||||||| | |||||||||||||   || ||||||||| ||    
T  18556821 cagcttatagcacaagcacttatcgtgacgagcgcttgtgtataagcttgtataagctatttttattgcaaaagataaaatattgttaaattgtttt-gt 18556919  T
Q  556 atatgctataagttgcttttataagcaatat 586  Q
    ||| ||||||||||||||||| |||| ||||    
T  18556920 atacgctataagttgcttttacaagctatat 18556950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 455 - 517
Target Start/End: Complemental strand, 24552517 - 24552455
Alignment:
Q  455 gcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctattt 517  Q
    |||||||||||||||| |  | |||||||||||||||| || |||||||||||||||||||||    
T  24552517 gcagcttatagcacaagtgattatcatgataagcgcttatgtacaagcttacataagctattt 24552455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 503 - 581
Target Start/End: Complemental strand, 37769789 - 37769711
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||  ||||||||||| ||| ||||||||||| || |||| ||||||| ||||||| |||||| ||||||||||    
T  37769789 ttacataaattatttttatagcaaatgataaaataaagttaaattatttttgtttatgctacaagttgtttttataagc 37769711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 5894354 - 5894293
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    ||||||||||||||| | ||||||| |||||||||||||| | || ||||||||||||||||    
T  5894354 cctgtttggataaacagcttatttgaagcttatagcacaagtgcttatcatgataagcgctt 5894293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 477 - 586
Target Start/End: Complemental strand, 14385918 - 14385809
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    ||||||||||| |||| || | |||||  || || |||||||||||| |||||||| |||||  || |||||||||||||| || ||||||||| ||||     
T  14385918 atcatgataagagcttatgtataagctggcagaaactatttttatagcaaaagatagaataatgttaaattgtttttgtatctgttataagttgtttttg 14385819  T
Q  577 taagcaatat 586  Q
    ||||| ||||    
T  14385818 taagctatat 14385809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 421 - 470
Target Start/End: Complemental strand, 34795615 - 34795566
Alignment:
Q  421 agagttagggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    ||||||||||||||||||||||||| | ||||||||| ||||||||||||    
T  34795615 agagttagggcctgtttggataaacagcttatttgcatcttatagcacaa 34795566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 437 - 570
Target Start/End: Original strand, 42391241 - 42391373
Alignment:
Q  437 tggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaat 536  Q
    |||||||||  ||||||||| ||||| ||||||||  || ||||||||||| |||| || | |||||| | ||| |||||||||||   ||| | |||||    
T  42391241 tggataaacaatttatttgcggcttacagcacaaaagcttatcatgataagtgcttatgtataagcttgcttaaactatttttataacgaaaca-aaaat 42391339  T
Q  537 aaattttaattgtttttgtatatgctataagttg 570  Q
    ||  || |||||||||||||||| ||||||||||    
T  42391340 aacattaaattgtttttgtatattctataagttg 42391373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 434 - 581
Target Start/End: Original strand, 30191863 - 30192011
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataa 533  Q
    |||||||||||  | |||||| || ||||||||| || | || || ||||||||| ||| || | |||  ||| |||||||||||||||| |||| ||||    
T  30191863 gtttggataaatagcttatttacaacttatagcagaagtgcttattatgataagcacttgtgtataagtatacctaagctatttttatagcaaaaaataa 30191962  T
Q  534 aataaattttaattgtttt-tgtatatgctataagttgcttttataagc 581  Q
    |||||| || | || |||| || |||||||||||| || ||||||||||    
T  30191963 aataaagttaatttattttgtgcatatgctataagctgtttttataagc 30192011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 607
Target Start/End: Original strand, 36872670 - 36872777
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttga 598  Q
    |||||| |||||||||||||||| | |||| |||||| || | ||| |||||||||||| |||||||||||| ||||| |||| |||| | ||| |||      
T  36872670 aagcttgcataagctatttttattgcaaaaaataaaa-aactgttagttgtttttgtatgtgctataagttgtttttacaagctatattgcagaacttat 36872768  T
Q  599 gaaaataag 607  Q
    |||||||||    
T  36872769 gaaaataag 36872777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 432 - 492
Target Start/End: Complemental strand, 47499033 - 47498973
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    ||||||||||||||   |||||||||||||||||||||| | || ||||||||||||||||    
T  47499033 ctgtttggataaacaacttatttgcagcttatagcacaagtgcttatcatgataagcgctt 47498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 566
Target Start/End: Complemental strand, 7107645 - 7107583
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||||||||||||||||||||| || || |||||||||||     |||||||||||||||||||||||    
T  7107645 aagcttacataagctatttttacagcaatagataaaataa-----aattgtttttgtatatgctataa 7107583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 33186210 - 33186285
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||| ||| ||||| ||| ||||||| ||| || |||| || ||||||||||||||||||| ||||||||||    
T  33186210 cataagctctttctatagcaaaggataaaagaaagttaaatttttcttgtatatgctataagttgtttttataagc 33186285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 428 - 581
Target Start/End: Complemental strand, 33546654 - 33546504
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    |||||||||||||||||| | ||||| |||||||| ||||||| |  | ||||||||| |||||||   | || |||   |||||||||||||| | |||    
T  33546654 gggcctgtttggataaacagcttattcgcagcttaaagcacaagtgtttatcatgatatgcgcttt---ataatcttgattaagctatttttatggcaaa 33546558  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
     |||| ||| |   | |||| |||||||||||||| ||||||| ||||||||||    
T  33546557 ggatataatgacgctaaattctttttgtatatgctctaagttgtttttataagc 33546504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 522
Target Start/End: Original strand, 5741528 - 5741622
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttata 522  Q
    |||||||||||||||||    |||||||  |||||||||||||   |  |||||||||||||||| || | ||| ||||||||||||||||||||    
T  5741528 gggcctgtttggataaatatcttatttgtggcttatagcacaagcacctatcatgataagcgcttatgtataagtttacataagctatttttata 5741622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 428 - 470
Target Start/End: Complemental strand, 17603575 - 17603533
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  17603575 gggcctgtttggataaacggcttatttgtagcttatagcacaa 17603533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 569
Target Start/End: Original strand, 17830095 - 17830160
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    ||||||||||||||||||||| ||| |||||||||||  |||| | ||||||||||||||| |||||    
T  17830095 ttacataagctatttttatagcaaatgataaaataaa-gttaactatttttgtatatgctacaagtt 17830160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 512 - 578
Target Start/End: Complemental strand, 41184770 - 41184704
Alignment:
Q  512 ctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttata 578  Q
    |||||||||||| ||||||||||||||  || ||||||||||||||||  ||||| ||| |||||||    
T  41184770 ctatttttatagcaaaagataaaataatgttaaattgtttttgtatatattataatttggttttata 41184704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 508 - 629
Target Start/End: Original strand, 473110 - 473231
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    ||||| ||||||  || ||||| ||||||||| || ||||||||| || |||||||||||||| |||||||||   ||| ||||| |||  |||||||||    
T  473110 taagcaattttttcagcaaaaggtaaaataaagttaaattgttttcgtgtatgctataagttgtttttataagttctattggagaacttatgaaaataag 473209  T
Q  608 gcgaaaaaatcttgtgcaaatt 629  Q
      ||||||| ||| || |||||    
T  473210 ttgaaaaaagcttatgaaaatt 473231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 510 - 567
Target Start/End: Complemental strand, 9572230 - 9572173
Alignment:
Q  510 agctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||||| ||||| ||||||||||||||| || ||||| ||||||||| ||||||||    
T  9572230 agctatttctatagcaaaagataaaataaagttaaattgcttttgtataagctataag 9572173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 579
Target Start/End: Original strand, 1432460 - 1432532
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||||||||| ||||| ||||||||||||| | || |||||||||| |||| ||||||| ||| ||| ||||    
T  1432460 ataagctatttctatagtaaaagataaaatagagttcaattgtttttttataagctataaattgttttcataa 1432532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 506 - 570
Target Start/End: Original strand, 5063407 - 5063471
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||| |||||||||||  ||||||||||||||  || | ||||||||||||||| |||||||||    
T  5063407 cataaactatttttatactaaaagataaaataacattaacttgtttttgtatatgttataagttg 5063471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 551
Target Start/End: Original strand, 29904704 - 29904748
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgttt 551  Q
    ||||||||||||||||| |||||||||||||||||| || |||||    
T  29904704 ataagctatttttatagcaaaagataaaataaatttaaaatgttt 29904748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 33835648 - 33835576
Alignment:
Q  494 tgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||| ||| ||||||||| ||||||||||||| |||||||||||   || ||||  |||||||||||||||||    
T  33835648 tgcataaggttacataagttatttttatagaagaagataaaatattattaaattacttttgtatatgctataa 33835576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 494 - 566
Target Start/End: Complemental strand, 33914202 - 33914130
Alignment:
Q  494 tgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    |||| ||| ||||||||| ||||||||||||| |||||||||||   || ||||  |||||||||||||||||    
T  33914202 tgcataaggttacataagttatttttatagaagaagataaaatattattaaattacttttgtatatgctataa 33914130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 433 - 488
Target Start/End: Original strand, 30581683 - 30581738
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagc 488  Q
    ||||||||||||| ||||||||||||||||||| |||| | ||  |||||||||||    
T  30581683 tgtttggataaacagtttatttgcagcttatagaacaagtacttttcatgataagc 30581738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 518
Target Start/End: Original strand, 38247319 - 38247409
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttt 518  Q
    ||||||||||||||||||| | | ||||||||||||||||||||   || ||||||||| || ||| || | ||||| ||||||||| ||||    
T  38247319 agggcctgtttggataaacagct-atttgcagcttatagcacaagcacttatcatgatatgcacttatgtataagctcacataagctgtttt 38247409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 570
Target Start/End: Original strand, 38578472 - 38578535
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||| ||||  ||||||||| ||||| || |||| |||||||||| |||||||||||    
T  38578472 ataagctatttctataacaaaagataacataaagttaaattatttttgtataagctataagttg 38578535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 51190808 - 51190866
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||| || || ||||||||||||||| || ||||||||||||||| | ||||||    
T  51190808 aagctatttgtaaagcaaaagataaaataaagttaaattgtttttgtataagttataag 51190866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 432 - 469
Target Start/End: Complemental strand, 24562503 - 24562466
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcaca 469  Q
    |||||||||||||| | |||||||||||||||||||||    
T  24562503 ctgtttggataaacagcttatttgcagcttatagcaca 24562466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 511 - 580
Target Start/End: Original strand, 36070199 - 36070268
Alignment:
Q  511 gctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||||||||||  ||||||||||||||| || |||||| || | ||| ||||||||||| ||| |||||    
T  36070199 gctatttttataacaaaagataaaataaagttaaattgtcttcggataagctataagttgttttcataag 36070268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 509 - 557
Target Start/End: Original strand, 36872215 - 36872264
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaat-tttaattgtttttgtat 557  Q
    ||||||||||||||| |||||||||||||| | || ||||||||||||||    
T  36872215 aagctatttttatagcaaaagataaaataattgttaaattgtttttgtat 36872264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 37617609 - 37617564
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    ||||||| |||||| ||||||  |||||||||||||||||||||||    
T  37617609 ttagggcatgtttgtataaacaatttatttgcagcttatagcacaa 37617564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Original strand, 49938611 - 49938656
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    ||||||||||||||||||||  | |||| |||||||||||||||||    
T  49938611 ttagggcctgtttggataaaaagcttatctgcagcttatagcacaa 49938656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 2194484 - 2194411
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||||||| ||||  || |||||||||||| ||  | |||||||||||  ||||||||||| ||||||||||    
T  2194484 cataagctatttctataacaatagataaaataaagtt--agtgtttttgtattggctataagttgtttttataagc 2194411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 580
Target Start/End: Original strand, 6556953 - 6556989
Alignment:
Q  544 aattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||||||||||||||| ||||||||| |||||||||    
T  6556953 aattgtttttgtatatgttataagttgtttttataag 6556989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 586
Target Start/End: Complemental strand, 37517320 - 37517240
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||||| ||||| ||||  |||| |||||||||| || ||||||||||||||||  ||||||||  ||| |||||| ||||    
T  37517320 cataagttatttctataccaaaatataaaataaagttaaattgtttttgtatatattataagttattttaataagctatat 37517240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 549 - 629
Target Start/End: Original strand, 49938734 - 49938814
Alignment:
Q  549 tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    |||||||||||| ||||||||| |||||||||| ||||  |||| |||  |||||||||  ||||||| ||| || |||||    
T  49938734 tttttgtatatgttataagttgtttttataagctatattagagaacttatgaaaataagttgaaaaaagcttttgaaaatt 49938814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 70; Significance: 3e-31; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 427 - 592
Target Start/End: Complemental strand, 50681294 - 50681129
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||| |||||||||||||   ||||||  ||||||||||||||   || ||||||||||||| || || | ||||||||| ||||||||||||||| |     
T  50681294 agggcttgtttggataaacaacttatttatagcttatagcacaagaacttatcatgataagcgtttatgtataagcttacaaaagctatttttataggat 50681195  T
Q  527 aagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||||  || ||||||||||||||||||||||||||| || ||||||| |||| |||||    
T  50681194 aagataaaataatgttaaattgtttttgtatatgctataagttgtttatataagctatattggaga 50681129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 492 - 606
Target Start/End: Original strand, 9760370 - 9760484
Alignment:
Q  492 tttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggag 591  Q
    |||||| |||||| |||||| ||||||||| ||||||||||||||||| || |||| |||||  ||||||||||||||| |||||||||| |||| ||||    
T  9760370 tttgcataagctttcataagttatttttattgaaaaagataaaataaagttaaattcttttttaatatgctataagttgtttttataagctatattggag 9760469  T
Q  592 atcttgagaaaataa 606  Q
    | |||  ||||||||    
T  9760470 aacttatgaaaataa 9760484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 428 - 553
Target Start/End: Original strand, 43505824 - 43505947
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    |||| |||||||||||||   ||||||||| |||||||||||||  | ||||||||||||| ||| || | |||||| |||||||||||||||||| |||    
T  43505824 gggcatgtttggataaacaacttatttgcaacttatagcacaaa--cgcatcatgataagcacttatgtataagcttgcataagctatttttatagcaaa 43505921  T
Q  528 agataaaataaattttaattgttttt 553  Q
    |||||||||||  || ||||||||||    
T  43505922 agataaaataacgttaaattgttttt 43505947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 425 - 522
Target Start/End: Original strand, 18814955 - 18815051
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttata 522  Q
    |||| ||||||||||||||| |||||||||||||||||| |||||| | || ||||| |||||| |||||||| ||||||||||||||| ||||||||    
T  18814955 ttagagcctgtttggataaatggtttatttgcagcttatggcacaagtgcttatcat-ataagcacttttgcataagcttacataagctgtttttata 18815051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 456 - 581
Target Start/End: Original strand, 41336655 - 41336779
Alignment:
Q  456 cagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgt 555  Q
    ||||||||||||||| |||| || ||||||||| ||| || | | |||| ||||||||||||||||||  |||||||||||||| || ||||||||||||    
T  41336655 cagcttatagcacaagttcttattatgataagcacttatgtataggcttgcataagctatttttatag-caaagataaaataaagttaaattgtttttgt 41336753  T
Q  556 atatgctataagttgcttttataagc 581  Q
    ||||| ||||| ||| |||| |||||    
T  41336754 atatgttataaattgtttttctaagc 41336779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 499 - 586
Target Start/End: Complemental strand, 31076519 - 31076432
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||||| ||||||||||||||| || |||||||||||||| ||| || |||||||||||||||||||| ||| |||||||||| ||||    
T  31076519 aagcttgcataagctatttttagagcaaaagataaaataagtttaaactgtttttgtatatgctataaattgtttttataagctatat 31076432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 427 - 569
Target Start/End: Original strand, 17204003 - 17204145
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||| ||||||||||||||   ||||||||||||||||| ||||   || |||| ||||| ||||| ||    |||||||||||||| ||||||||| ||    
T  17204003 agggactgtttggataaacaacttatttgcagcttatagaacaagcacttatcacgataaccgcttatgtgttagcttacataagctgtttttatagcaa 17204102  T
Q  527 aagataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    | | ||||||||| ||  ||||||||||||||||||| |||||    
T  17204103 atgttaaaataaagttatattgtttttgtatatgctacaagtt 17204145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 477 - 570
Target Start/End: Original strand, 22030119 - 22030211
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    |||||||||||||||| || | ||||| ||||||||||||| ||||| ||| ||||||||||| ||  ||| ||||||||||||||||||||||    
T  22030119 atcatgataagcgcttatgtataagctcacataagctatttctatag-aaaggataaaataaagttatattatttttgtatatgctataagttg 22030211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 499 - 580
Target Start/End: Complemental strand, 54069550 - 54069469
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||| |||| ||||||||||||  ||||||||||||||  || ||||||||||||||||||||||| ||| |||||||||    
T  54069550 aagcttgcatatgctatttttatatcaaaagataaaataatgttaaattgtttttgtatatgctataatttgtttttataag 54069469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 25904343 - 25904275
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||||||||||||||||||| || ||||||||||||||| || ||||| |||||||| |||||||||    
T  25904343 aagcttacataagctatttttacagcaaaagataaaataaagttaaattgattttgtatttgctataag 25904275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 485 - 607
Target Start/End: Complemental strand, 33587101 - 33586980
Alignment:
Q  485 aagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaat 584  Q
    |||||||| || | |||||| ||||||||||||||||||  |||||||||| ||  || ||  ||||||||||||| |||| |||| |||||||||| ||    
T  33587101 aagcgcttatgtataagcttgcataagctatttttatagcgaaagataaaacaacgttgaac-gtttttgtatatgttataggttgtttttataagctat 33587003  T
Q  585 atcggagatcttgagaaaataag 607  Q
    |||||||| |||  |||||||||    
T  33587002 atcggagaacttatgaaaataag 33586980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 449 - 581
Target Start/End: Complemental strand, 15173483 - 15173351
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    |||||| |||||| |||||||||  || |||||||||||||| | || | |||||| ||||||||| ||| ||||  |||||||||||||   | |||||    
T  15173483 ttattttcagcttgtagcacaaacgcttatcatgataagcgcatatgtataagcttgcataagctactttaatagctaaagataaaataacgataaattg 15173384  T
Q  549 tttttgtatatgctataagttgcttttataagc 581  Q
    || || ||| |||||||||| | ||||||||||    
T  15173383 ttcttctatgtgctataagtggtttttataagc 15173351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 423 - 567
Target Start/End: Original strand, 19494775 - 19494919
Alignment:
Q  423 agttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttata 522  Q
    |||||| | |||||| |||||||   ||||| | |||||||||||||| | ||  ||||||||||| | | || | ||| |||||||||||| || ||||    
T  19494775 agttagagtctgtttagataaacatcttattcggagcttatagcacaagtacttttcatgataagcacctatgtataaggttacataagctagttctata 19494874  T
Q  523 gaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    | ||| |||||||||||  | ||||||||||||||||||| ||||    
T  19494875 gcaaatgataaaataaagctaaattgtttttgtatatgctctaag 19494919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 495 - 623
Target Start/End: Original strand, 20108942 - 20109070
Alignment:
Q  495 gcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatc 594  Q
    ||||| |||| ||||||||| ||||| || |||||||||||| || || | ||||||||||||||| |||||| || |||||||||  ||||  |||| |    
T  20108942 gcacaggcttgcataagctagttttagaggaaaagataaaatgaagttaagttgtttttgtatatggtataagctgtttttataagatatattagagaac 20109041  T
Q  595 ttgagaaaataaggcgaaaaaatcttgtg 623  Q
    ||  |||||| || |||||||| ||||||    
T  20109042 ttttgaaaatgagtcgaaaaaagcttgtg 20109070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 507 - 592
Target Start/End: Complemental strand, 21731778 - 21731696
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||||||||| |||||||||| |||  |||   ||||||||||| |||||||||||| |||||||||| |||| |||||    
T  21731778 ataagctatttttatagcaaaagataaagtaacattt---tgtttttgtatgtgctataagttgtttttataagctatattggaga 21731696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 506 - 581
Target Start/End: Original strand, 44797830 - 44797905
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||||||||||||| ||||||||||| ||  || ||||| |||||| || ||||||||||| ||||||||||    
T  44797830 cataagctatttttatagcaaaagataaaacaacgttaaattgattttgtgtacgctataagttgtttttataagc 44797905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 533 - 579
Target Start/End: Complemental strand, 53294213 - 53294167
Alignment:
Q  533 aaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||    
T  53294213 aaataaatttaaattgtttttgtatatgctataagttgtttttataa 53294167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 581
Target Start/End: Complemental strand, 15177357 - 15177253
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    |||||||||||| | | || | |||||| ||||||||||||| ||||  |||||||||||||  || ||||||| || ||| |||||||||| | |||||    
T  15177357 atcatgataagcacgtatgtataagcttgcataagctattttaatagctaaagataaaataacgttaaattgttcttctatgtgctataagtggttttta 15177258  T
Q  577 taagc 581  Q
    |||||    
T  15177257 taagc 15177253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 508 - 592
Target Start/End: Original strand, 17884014 - 17884098
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||||||| ||||  ||||||||||||||| || ||||||||||||||| | ||| ||||| ||| |||||| |||| |||||    
T  17884014 taagctatttctataacaaaagataaaataaagttaaattgtttttgtataagttatcagttgttttcataagctatattggaga 17884098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 506 - 586
Target Start/End: Complemental strand, 42404124 - 42404044
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||| ||| ||||||||| ||||||||||||||  || ||||||||||||| ||||| |||| || |||||||||| ||||    
T  42404124 catacgctctttttatagcaaaagataaaataatgttaaattgtttttgtacatgctgtaagctgtttttataagccatat 42404044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 506 - 616
Target Start/End: Original strand, 2243993 - 2244105
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgta-tatgctataagttgcttt--tataagcaatatcggagatcttgagaaa 602  Q
    ||||||||| |||||||| ||||||||||||||  ||   ||||||||||| |||||||||||||| |||  ||||||| |||| ||||| |||  ||||    
T  2243993 cataagctagttttatag-aaaagataaaataatattacgttgtttttgtattatgctataagttgttttaatataagctatattggagaacttatgaaa 2244091  T
Q  603 ataaggcgaaaaaa 616  Q
    |||||| |||||||    
T  2244092 ataaggtgaaaaaa 2244105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 503 - 581
Target Start/End: Complemental strand, 16200110 - 16200032
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||||||||||| | | ||||| ||| |  || ||||||||||||||||||||| || ||| ||||||    
T  16200110 ttacataagctatttttatagaagatggtaaaagaaaatcaaactgtttttgtatatgctataagctgttttcataagc 16200032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 419 - 469
Target Start/End: Complemental strand, 39603644 - 39603594
Alignment:
Q  419 caagagttagggcctgtttggataaacggtttatttgcagcttatagcaca 469  Q
    ||||| ||||||||| ||||||||||| | |||||||||||||||||||||    
T  39603644 caagatttagggcctatttggataaacagcttatttgcagcttatagcaca 39603594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 556
Target Start/End: Original strand, 3155548 - 3155597
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgta 556  Q
    ||||||||||| ||||| ||||||||||||||| || |||||||||||||    
T  3155548 ataagctatttctatagcaaaagataaaataaagttaaattgtttttgta 3155597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 580
Target Start/End: Original strand, 11347723 - 11347796
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||| |||||||||||| |||||||||||||| |||  ||  ||||||||||| |||||||||  |||||||||    
T  11347723 ataaactatttttatagcaaaagataaaataactttagatcatttttgtatatactataagttatttttataag 11347796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 579
Target Start/End: Original strand, 7601704 - 7601776
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||||||||  ||||| ||| ||||||||||| || ||||||||||||||||| ||| ||| | ||||||||    
T  7601704 ataagctattcctatagcaaaggataaaataaagttaaattgtttttgtatatgttatgagtagtttttataa 7601776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 499 - 587
Target Start/End: Original strand, 23319779 - 23319867
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatc 587  Q
    |||||||||| |||| ||| ||||| |||||||||| || | || ||| |||||| ||||||||||||  || |||||||||| |||||    
T  23319779 aagcttacattagctgtttgtatagcaaaagataaattatagttaaatagtttttctatatgctataaactgtttttataagctatatc 23319867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 425 - 521
Target Start/End: Original strand, 24169124 - 24169220
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttat 521  Q
    |||||||||||||| | |||| | ||| |||||||||||| ||| |   || |||||||| ||||||| || |  ||||||||||||||||||||||    
T  24169124 ttagggcctgtttgcagaaacagcttacttgcagcttatatcaccagcacttatcatgattagcgcttatgtatgagcttacataagctatttttat 24169220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 539
Target Start/End: Complemental strand, 27089 - 26984
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    ||||| ||||||||||||||   || |||||||||||||||||||   || ||||||||||||||    ||| |    ||||||||| |||||||| |||    
T  27089 tagggtctgtttggataaacatcttgtttgcagcttatagcacaagcgcttatcatgataagcgc----gcata----tacataagccatttttatggaa 26998  T
Q  526 aaagataaaataaa 539  Q
    ||||||||||||||    
T  26997 aaagataaaataaa 26984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 426 - 581
Target Start/End: Original strand, 29912813 - 29912967
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    |||||||||||||| |||||   |||||||| |||||||||| ||    | ||||| |||||| |||||| | |  ||||||| |||||||| ||||| |    
T  29912813 tagggcctgtttggctaaacaaattatttgctgcttatagcataagcagttatcataataagcacttttgtatacacttacatcagctatttctatagca 29912912  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||| |||||||||| |  ||||| ||||||||||| || |||| | ||| ||||||    
T  29912913 aaaaataaaataaagtaaaattg-ttttgtatatgttaaaagtcgttttcataagc 29912967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 449 - 539
Target Start/End: Original strand, 31851343 - 31851431
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaa 539  Q
    |||||||||||||||  ||||| | || ||||||||||||  || || | ||||| ||||||||||||||||||  ||| |||||||||||    
T  31851343 ttatttgcagcttat--cacaagtgcttatcatgataagcatttatgtagaagctcacataagctatttttataacaaatgataaaataaa 31851431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 525 - 616
Target Start/End: Complemental strand, 39691250 - 39691159
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    ||||||||||||||  || || |  ||||||||||||||||||||| |||||||||| |||| | ||| |||  |||||||||  |||||||    
T  39691250 aaaagataaaataatgttaaaattgttttgtatatgctataagttgtttttataagctatattgaagaacttacgaaaataagttgaaaaaa 39691159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 425 - 607
Target Start/End: Complemental strand, 46592417 - 46592234
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttataga 524  Q
    |||||||||||||| |||| | | |||||| ||||||| |||||||   || || |||||||| || | |||| |||||  ||| ||||||||||||||     
T  46592417 ttagggcctgtttgtataaccagcttatttacagcttaaagcacaagcacttataatgataagtgcctatgcataagctagcatgagctatttttatagc 46592318  T
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttg-cttttataagcaatatcggagatcttgagaaaataag 607  Q
    |||| || |||| |   | ||||| |||| |||||| |||||||||  |||||||||  |||| ||||| |||  |||||||||    
T  46592317 aaaaaattaaatgacggtaaattgattttatatatgttataagttgttttttataagttatattggagaacttatgaaaataag 46592234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 477 - 592
Target Start/End: Complemental strand, 49940327 - 49940209
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat-aaaataaattttaat--tgtttttgtatatgctataagttgctt 573  Q
    |||||||| ||| ||| |||| |||| |||  |||||||||||||||||||| || ||| ||| || | ||  | ||||||||||||||||||| || ||    
T  49940327 atcatgatgagcacttatgcataagcatacgaaagctatttttatagaaaaacatcaaattaagttattattatttttttgtatatgctataagctgttt 49940228  T
Q  574 ttataagcaatatcggaga 592  Q
    |||||||| | ||||||||    
T  49940227 ttataagctacatcggaga 49940209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 507 - 629
Target Start/End: Complemental strand, 50662857 - 50662741
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataa 606  Q
    ||||||||||||||||| | ||||||||||||  || ||||||      ||||||||||||||| || ||||||| |||| |||||  ||| ||||||||    
T  50662857 ataagctatttttatagcataagataaaataatgttaaattgt------atatgctataagttgtttatataagctatattggagaaattgtgaaaataa 50662764  T
Q  607 ggcgaaaaaatcttgtgcaaatt 629  Q
    |  ||||||| ||| || |||||    
T  50662763 gttgaaaaaagcttatgaaaatt 50662741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 1706569 - 1706627
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||||||||||||||| ||||||||  || ||||||||| ||| | ||||||||    
T  1706569 aagctatttttatagaaaaagttaaaataatgttcaattgttttcgtagaagctataag 1706627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 429 - 471
Target Start/End: Original strand, 2243944 - 2243986
Alignment:
Q  429 ggcctgtttggataaacggtttatttgcagcttatagcacaaa 471  Q
    ||||||||||||||||| | |||||| ||||||||||||||||    
T  2243944 ggcctgtttggataaacagattatttacagcttatagcacaaa 2243986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 510 - 580
Target Start/End: Original strand, 25885807 - 25885877
Alignment:
Q  510 agctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||| ||| ||||| ||||||||||||||| || ||||||||| || || ||||||||||| ||| |||||    
T  25885807 agctctttctatagcaaaagataaaataaagttaaattgttttcgtgtaagctataagttgttttcataag 25885877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 529 - 567
Target Start/End: Original strand, 39137504 - 39137542
Alignment:
Q  529 gataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||||||||||||| |||||||||| ||||||||    
T  39137504 gataaaataaattttaattatttttgtataagctataag 39137542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 509 - 567
Target Start/End: Original strand, 51630058 - 51630116
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||| ||||| ||||||||||||||| || |||||||||  |||| ||||||||    
T  51630058 aagctatttatatagcaaaagataaaataaagttaaattgttttgatataagctataag 51630116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 506 - 580
Target Start/End: Complemental strand, 55414546 - 55414472
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||||||||| ||| | ||||||||||||||| || | || |||||| ||||||||||| ||| ||| |||||    
T  55414546 cataagctatttctattggaaaagataaaataaagttaatttttttttgcatatgctataaattgttttcataag 55414472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 544 - 581
Target Start/End: Complemental strand, 7839449 - 7839412
Alignment:
Q  544 aattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||||||||||| ||| ||||||||||    
T  7839449 aattgtttttgtatatgctataaattgtttttataagc 7839412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 470
Target Start/End: Complemental strand, 38337101 - 38337056
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    |||||||||||||||||  || ||||||| ||||||||||||||||    
T  38337101 ttagggcctgtttggatggactgtttattcgcagcttatagcacaa 38337056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 539
Target Start/End: Complemental strand, 8422962 - 8422930
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaa 539  Q
    |||||||||||||||| ||||||||||||||||    
T  8422962 ataagctatttttataaaaaaagataaaataaa 8422930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 13126740 - 13126674
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||||| ||||||||||||||||  || ||||||||| | |||| |||||||||| |||||||||||    
T  13126740 aagcttacgtaagctatttttatag-gaaggataaaatagagtttagttgtttttgt-tatgctataag 13126674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 539
Target Start/End: Original strand, 21193943 - 21193975
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaa 539  Q
    ||||||||||||||||| |||||||||||||||    
T  21193943 ataagctatttttatagtaaaagataaaataaa 21193975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 68; Significance: 5e-30; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 425 - 604
Target Start/End: Original strand, 9210491 - 9210669
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttataga 524  Q
    ||||||||||||||||||||| | |||||||||||||||||| ||||   | |||||||||| ||||| || | |||||| ||||||||| |||||||||    
T  9210491 ttagggcctgtttggataaacagcttatttgcagcttatagcgcaaacatttatcatgataatcgcttatgtataagcttgcataagctacttttataga 9210590  T
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaat 604  Q
    |||| ||||||| |  || |||| ||||| |||||||||||||||| ||| |||||||| ||  |||| |||| ||||||    
T  9210591 aaaaaataaaatgatgttaaattcttttt-tatatgctataagttgttttaataagcaacatatgagaacttgggaaaat 9210669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 427 - 570
Target Start/End: Original strand, 46078012 - 46078157
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||||||||||||| |||| | |||| |||| |||| ||||||||  |  |||||||||||||||| || | ||||||||||||| ||||||||||||||    
T  46078012 agggcctgtttggacaaacagcttatatgcaacttaaagcacaaacacatatcatgataagcgcttatgtataagcttacataagttatttttatagaaa 46078111  T
Q  527 aagataaaataaattttaattgtttttg--tatatgctataagttg 570  Q
    ||||||||| ||| || |||||||||||  ||||||||||||||||    
T  46078112 aagataaaacaaagttaaattgtttttgtatatatgctataagttg 46078157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 428 - 616
Target Start/End: Original strand, 45263959 - 45264149
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttt--tatagaa 525  Q
    ||||||||||||||||||   |||||||| ||||||  |||||   || ||||||| ||||||||  ||| ||||||||||||||||||||  |||||||    
T  45263959 gggcctgtttggataaacaacttatttgcggcttatcacacaagcgcttatcatgaaaagcgcttacgcataagcttacataagctatttttttatagaa 45264058  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    |||||| ||||||| || |||||||||||||||||||||||| |  |||||| |   ||||| |||| |||  ||||||||| ||||||||    
T  45264059 aaagatgaaataaagttaaattgtttttgtatatgctataagctatttttatgatatatatcagagaacttaggaaaataagccgaaaaaa 45264149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 435 - 580
Target Start/End: Complemental strand, 4970985 - 4970845
Alignment:
Q  435 tttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaa 534  Q
    ||||||||||||| ||||||||||||||||| | || | |  | ||||||||||| || || | ||||||||||||||||||| ||||| ||||||||||    
T  4970985 tttggataaacggcttatttgcagcttatagaaaaagtccctaccatgataagcggttatgtataagcttacataagctatttctatagcaaaagataaa 4970886  T
Q  535 ataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||     ||||||||||||||||||||||||||  |||||||||    
T  4970885 ataa-----aattgtttttgtatatgctataagttctttttataag 4970845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 428 - 539
Target Start/End: Original strand, 33128623 - 33128734
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    |||||||||||||||||| | |||||||||||||| ||||||||  || ||||||||||| |||| |||| |||||||| || | ||||||||||||||     
T  33128623 gggcctgtttggataaacagcttatttgcagcttacagcacaaacacttatcatgataagtgcttatgcataagcttacttacgttatttttatagaaag 33128722  T
Q  528 agataaaataaa 539  Q
    ||||||||||||    
T  33128723 agataaaataaa 33128734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 499 - 607
Target Start/End: Original strand, 420297 - 420405
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttga 598  Q
    |||||| |||||||||| ||||||| ||||||||||||||  || ||||||||||||||||||||||||||| ||   ||||| |||| ||||| |||      
T  420297 aagcttgcataagctatgtttatagcaaaagataaaataatgttcaattgtttttgtatatgctataagttgtttccgtaagctatattggagaacttat 420396  T
Q  599 gaaaataag 607  Q
    |||||||||    
T  420397 gaaaataag 420405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 432 - 532
Target Start/End: Complemental strand, 21568828 - 21568728
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat 531  Q
    |||||||||||||| | || |||||||||||||||| || | || |||||||||||| ||| || | |||||| |||||||||||||||||| |||||||    
T  21568828 ctgtttggataaacagcttgtttgcagcttatagcataagtgcttatcatgataagcacttatgtataagcttgcataagctatttttatagcaaaagat 21568729  T
Q  532 a 532  Q
    |    
T  21568728 a 21568728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 428 - 580
Target Start/End: Original strand, 119775 - 119928
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctc--atcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    |||||||||||||||||  | |||| |||||||||||||||| |  | |  ||||||| || | || | ||| || |||||||||||||||| || || |    
T  119775 gggcctgtttggataaaaagcttatctgcagcttatagcacacacacacttatcatgacaaacactat-gcataaccttacataagctatttctacagga 119873  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||||||||||| || |||||||| |||| ||||||||||||| |||||||||    
T  119874 aaagataaaataaagttaaattgtttgtgtaaatgctataagttgtttttataag 119928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 452 - 581
Target Start/End: Complemental strand, 45806657 - 45806528
Alignment:
Q  452 tttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgttt 551  Q
    |||||||||||||||| ||   || ||||| |||||| ||| || | |||||| |||||||||| ||||||| |||||| |||||||  || ||||||||    
T  45806657 tttgcagcttatagcaaaagcacttatcataataagcacttatgtataagcttgcataagctatgtttatagcaaaagagaaaataacgttaaattgttt 45806558  T
Q  552 ttgtatatgctataagttgcttttataagc 581  Q
    || ||  |||||||||||| ||||||||||    
T  45806557 ttctaattgctataagttgtttttataagc 45806528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 425 - 581
Target Start/End: Original strand, 48469913 - 48470063
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttataga 524  Q
    |||||| |||||||| | ||| | |||||||||||||||||||||||  || ||||      ||||||||| | |||| | |||||||||||| || ||     
T  48469913 ttagggtctgtttgggtgaacagcttatttgcagcttatagcacaaacacttatca------gcgcttttgtataagccttcataagctatttctacagc 48470006  T
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||||||| || || ||||||||||||||||  ||||||||| ||| ||||||    
T  48470007 aaaagataaaattaagttaaattgtttttgtatataatataagttgttttcataagc 48470063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 542 - 629
Target Start/End: Original strand, 34744008 - 34744095
Alignment:
Q  542 ttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    ||||||||||||||||||| ||||||||| ||| |||||| |||| ||||| |||   ||||||||||||||||| |||||| |||||    
T  34744008 ttaattgtttttgtatatggtataagttgttttcataagctatattggagaacttataaaaataaggcgaaaaaagcttgtgaaaatt 34744095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 432 - 586
Target Start/End: Complemental strand, 38138679 - 38138525
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat 531  Q
    |||||||||||||| | ||||||||  ||||||||||||   ||  |||||||||| | || || | ||| ||  ||||||||||||||||| | |||||    
T  38138679 ctgtttggataaacagcttatttgcgtcttatagcacaatcacttgtcatgataagagtttatgtataaggttggataagctatttttatagtataagat 38138580  T
Q  532 aaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    ||| |||  ||  |||| ||||||||||||||||||||| |||||| ||| ||||    
T  38138579 aaagtaacgttacattgattttgtatatgctataagttgtttttattagctatat 38138525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 513 - 581
Target Start/End: Complemental strand, 11700385 - 11700317
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||||||||||||||| ||  ||||||||| ||||||| ||||| | |||||||||||    
T  11700385 tatttttatagaaaaagataaaataaagttacattgtttttatatatgcaataagcttcttttataagc 11700317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 426 - 567
Target Start/End: Complemental strand, 30571129 - 30570996
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    |||||| ||||||||||||| | ||||||||||||||||||| |         ||||||||| || | || | |||||||||||||||| || |||||      
T  30571129 tagggcgtgtttggataaacagcttatttgcagcttatagcatag--------catgataagtgcatatgtataagcttacataagctacttatatagcg 30571038  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||| ||||||||| || |||| |||||||||||||||||||    
T  30571037 aaaggtaaaataaagttaaattatttttgtatatgctataag 30570996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 535 - 607
Target Start/End: Complemental strand, 43694667 - 43694595
Alignment:
Q  535 ataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    |||||||| |||||||||||||||||||||||| || |||||||||| |||||| ||| |||  |||||||||    
T  43694667 ataaatttaaattgtttttgtatatgctataagctgtttttataagctatatcgaagaacttatgaaaataag 43694595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 452 - 567
Target Start/End: Complemental strand, 34464392 - 34464278
Alignment:
Q  452 tttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgttt 551  Q
    |||||||| ||||||| |||  || |||||||||||| ||| | || | ||||||| ||| |||||||||| ||||||||||| |||| || | ||||||    
T  34464392 tttgcagcctatagcataaacccttatcatgataagcacttat-catatgcttacacaagttatttttataaaaaaagataaattaaagttaatttgttt 34464294  T
Q  552 ttgtatatgctataag 567  Q
    ||||||||| ||||||    
T  34464293 ttgtatatgttataag 34464278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 431 - 605
Target Start/End: Complemental strand, 46280460 - 46280299
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    ||||||||||||||| ||||||||  ||||||||||||||    | |||||||||||| ||  |||| |||||||||||| |||||| | |             
T  46280460 cctgtttggataaacagtttatttatagcttatagcacaagcgtttatcatgataagcactcatgcataagcttacataatctatttatgt--------- 46280370  T
Q  531 taaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaata 605  Q
        |||||||| |||||||||||||||||||||||| || |||||||||| |||| ||||| |||  |||||||    
T  46280369 ----ataaatttaaattgtttttgtatatgctataagctgtttttataagctatattggagaacttatgaaaata 46280299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 499 - 592
Target Start/End: Original strand, 45338386 - 45338478
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||| |||||| |||||| |||| |||| |||||||||  || ||||||||||||||||||| ||||||| |||| ||||| |||| |||||    
T  45338386 aagcttgcataagttattttcatagcaaaaaataaaataaccttaaattgtttttgtatatgctgtaagttg-ttttttaagctatattggaga 45338478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 508 - 607
Target Start/End: Complemental strand, 19022709 - 19022610
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    |||||||||| |||   ||||||||||| || ||| |||||||||  || ||||||||||||| |||||||||| |||| ||||| |||  |||||||||    
T  19022709 taagctatttctatcataaaagataaaagaactttaaattgttttaataaatgctataagttgtttttataagctatattggagaacttatgaaaataag 19022610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 506 - 581
Target Start/End: Complemental strand, 19302685 - 19302610
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||| || | |||||| | |||  || ||||||||||||||||| ||||||||| ||||||||||    
T  19302685 cataagctatttttacagcagaagatatagtaacgttaaattgtttttgtatatgttataagttgtttttataagc 19302610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 570
Target Start/End: Complemental strand, 28613659 - 28613596
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||||||||  ||||||||||| ||| || ||||||||||||||| | |||||||||    
T  28613659 ataagctatttttataacaaaagataaaacaaagttaaattgtttttgtataagttataagttg 28613596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 570
Target Start/End: Complemental strand, 45806459 - 45806388
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    |||||| |||||||||||||||||| ||||||||||||||  || ||||||| || ||  ||||||||||||    
T  45806459 aagcttgcataagctatttttatagcaaaagataaaataacgttaaattgttcttctaattgctataagttg 45806388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 514 - 616
Target Start/End: Original strand, 20234435 - 20234536
Alignment:
Q  514 atttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaa 613  Q
    |||||||||| ||||||||||||| | || |||||||||||||  |||||||||||| |||  ||||| |||| ||| || ||  ||||||||| |||||    
T  20234435 atttttatagcaaaagataaaatataattaaattgtttttgtaattgctataagttgttttactaagctatataggaaat-ttatgaaaataagtcgaaa 20234533  T
Q  614 aaa 616  Q
    |||    
T  20234534 aaa 20234536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 457 - 566
Target Start/End: Original strand, 20428362 - 20428474
Alignment:
Q  457 agcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgttttt--- 553  Q
    |||||||||||||||  ||  ||||||||||||||| || | ||| ||||||||| |  |||||| | ||| ||||||||||| ||||||| |||||       
T  20428362 agcttatagcacaaacacttctcatgataagcgcttatgtataaggttacataaggtggttttattggaaatgataaaataaagtttaattttttttttc 20428461  T
Q  554 gtatatgctataa 566  Q
    |||||||||||||    
T  20428462 gtatatgctataa 20428474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 20258463 - 20258520
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||| ||||||||||||||  || |||||||||||||  ||||||||||||    
T  20258463 tatttttatagcaaaagataaaataatgttaaattgtttttgtaattgctataagttg 20258520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 513 - 570
Target Start/End: Original strand, 20269527 - 20269584
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    ||||||||||| ||||||||||| ||| || ||||||||||||| ||| |||||||||    
T  20269527 tatttttatagcaaaagataaaacaaagttaaattgtttttgtaaatgttataagttg 20269584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 431 - 492
Target Start/End: Original strand, 33672957 - 33673018
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    |||||||||||||||  ||||||||||||||||||||||| |  | || |||||||||||||    
T  33672957 cctgtttggataaactatttatttgcagcttatagcacaagtatttattatgataagcgctt 33673018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 503 - 580
Target Start/End: Original strand, 39279704 - 39279781
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||||||||| ||| ||||| ||||||||||| ||| || ||||| |||||||||| ||||||| || ||| |||||    
T  39279704 ttacataagctgtttctatagcaaaagataaaacaaagttaaattgcttttgtatattctataagctggtttcataag 39279781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 39393766 - 39393705
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    ||||||||||| ||| | ||||||||||||||||||||||  | | ||||||||||||||||    
T  39393766 cctgtttggatgaacagcttatttgcagcttatagcacaagctttgatcatgataagcgctt 39393705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 483 - 575
Target Start/End: Original strand, 48140137 - 48140227
Alignment:
Q  483 ataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttt 575  Q
    |||||||||| || | |||||| |||||||||||||||||  ||||||||||||||   |  |||||||||  ||||||||||||||| ||||    
T  48140137 ataagcgcttatgtataagcttgcataagctatttttataacaaaagataaaataa--ctagattgtttttcaatatgctataagttgttttt 48140227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 424 - 512
Target Start/End: Complemental strand, 3308460 - 3308372
Alignment:
Q  424 gttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagc 512  Q
    ||||||| |||||| ||||||| | ||||||| |||||||||||||| | ||  |||||||||| |||| || | ||| ||||||||||    
T  3308460 gttagggtctgtttagataaacagcttatttggagcttatagcacaagtacttttcatgataagtgcttatgtataaggttacataagc 3308372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 433 - 569
Target Start/End: Complemental strand, 18865249 - 18865114
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    |||||||||||||   |||||||||||||||||||||||  || ||||||||||| | || |  | ||| ||||||||| ||||   |||| ||||||||    
T  18865249 tgtttggataaacaacttatttgcagcttatagcacaaacgcttatcatgataagtgtttatttataagtttacataagttattaagatagcaaaagata 18865150  T
Q  533 aaataaattttaattgtttttgtatatgctataagtt 569  Q
    |  |||| || | ||| || |||||||||||||||||    
T  18865149 atgtaaaattaagttg-ttatgtatatgctataagtt 18865114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 428 - 492
Target Start/End: Complemental strand, 38500122 - 38500058
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    |||||||||| ||||||| | |||||||||| |||||||||||   || ||||||||||||||||    
T  38500122 gggcctgtttagataaacagcttatttgcagtttatagcacaagcgcttatcatgataagcgctt 38500058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 427 - 486
Target Start/End: Complemental strand, 27863902 - 27863843
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataa 486  Q
    |||||||||||||||||||   ||||||| |||||||||||||| | || ||||||||||    
T  27863902 agggcctgtttggataaacaacttatttgtagcttatagcacaagtgcttatcatgataa 27863843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 435 - 579
Target Start/End: Original strand, 33287718 - 33287864
Alignment:
Q  435 tttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaa 534  Q
    |||||||||||  ||||||| || |||||||||||||   | ||||||||||  |||  || | || ||||| |||||||||| ||||  ||||||||||    
T  33287718 tttggataaacaatttatttacaacttatagcacaaacaattatcatgataaatgctgatggataatcttacgtaagctatttatataacaaaagataaa 33287817  T
Q  535 ataaattttaattgtttttgtatatgc--tataagttgcttttataa 579  Q
    || || || ||||  |||| |||||||  ||||||||| ||||||||    
T  33287818 atgaagttaaattacttttctatatgctatataagttgtttttataa 33287864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 513 - 580
Target Start/End: Complemental strand, 34083644 - 34083577
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||| ||||| ||||||||||||||| || |||||||| |||||| |||||||| || ||| |||||    
T  34083644 tatttctatagcaaaagataaaataaagttaaattgtttgtgtataagctataagctgttttcataag 34083577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 33266617 - 33266535
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||| ||| ||||||||| ||||| ||| ||||||||||| || ||||| |||| || || |||||||||  ||||||||||    
T  33266617 aagctcacaaaagctatttatatagcaaaggataaaataaagttaaattgcttttctacatcctataagttctttttataagc 33266535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 501 - 559
Target Start/End: Original strand, 45004705 - 45004763
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatat 559  Q
    |||| ||||| |||||||||||| ||||||||||||||| || |||||| |||| ||||    
T  45004705 gcttgcataaactatttttatagcaaaagataaaataaagttaaattgtatttgcatat 45004763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 538
Target Start/End: Complemental strand, 23989667 - 23989578
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataa 538  Q
    ||||||||||||||||| |||    || |||||||||||  ||| || | ||| || ||||| |||||||||||| ||||||||||||||    
T  23989667 ttatttgcagcttatagtacacgcgcttatcatgataagttcttatgtataagtttgcataaactatttttatagtaaaagataaaataa 23989578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 502 - 567
Target Start/End: Complemental strand, 40252237 - 40252172
Alignment:
Q  502 cttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||||||| |||||| | ||| ||||||| ||| || ||| ||||||||||||| ||||||    
T  40252237 cttacataagctagttttattgcaaatgataaaacaaagttaaatcgtttttgtatatgttataag 40252172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 519 - 579
Target Start/End: Complemental strand, 8960740 - 8960680
Alignment:
Q  519 tatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||| ||| ||||||||||| || ||||||||||||||||| ||| ||| | ||||||||    
T  8960740 tatagcaaatgataaaataaagttaaattgtttttgtatatgttatgagtagtttttataa 8960680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 559
Target Start/End: Complemental strand, 31247661 - 31247601
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatat 559  Q
    |||||| |||||||||||||||||| ||||||| ||||||   | ||||| ||||||||||    
T  31247661 aagcttgcataagctatttttatagcaaaagatgaaataacgataaattggttttgtatat 31247601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 499 - 535
Target Start/End: Complemental strand, 31247702 - 31247666
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaa 535  Q
    |||||| |||||||||||||||||| |||||||||||    
T  31247702 aagcttgcataagctatttttatagcaaaagataaaa 31247666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 426 - 486
Target Start/End: Complemental strand, 40252302 - 40252242
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataa 486  Q
    ||||||||||||||||||||   |||| ||||||||||||||||  |||| || |||||||    
T  40252302 tagggcctgtttggataaacaccttatatgcagcttatagcacatgttcttattatgataa 40252242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 501 - 565
Target Start/End: Complemental strand, 44216906 - 44216842
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctata 565  Q
    ||||||||||| | ||| ||||| ||||||||||||||| || |||  |||||| ||||||||||    
T  44216906 gcttacataagttctttctatagcaaaagataaaataaagttaaataatttttggatatgctata 44216842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 503 - 566
Target Start/End: Original strand, 48507662 - 48507726
Alignment:
Q  503 ttacataagctatttttatagaaaaagataa-aataaattttaattgtttttgtatatgctataa 566  Q
    |||| |||||| ||| ||||| ||||||||| ||| || || |||||||||||||||||||||||    
T  48507662 ttacgtaagctgtttctatagcaaaagataagaatgaagttaaattgtttttgtatatgctataa 48507726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 2e-29; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 425 - 567
Target Start/End: Complemental strand, 1058281 - 1058139
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttataga 524  Q
    |||||||||||||| |||||| | ||||||||||||||||||||||   || |  ||||||||||||| || | |||||||||||||||||||||||||     
T  1058281 ttagggcctgtttgaataaacagcttatttgcagcttatagcacaagcgcttactatgataagcgcttatgtataagcttacataagctatttttatagc 1058182  T
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||  |||||||||| || |  |||||||||||||||||||||    
T  1058181 aaatcataaaataaagttaatctgtttttgtatatgctataag 1058139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 428 - 622
Target Start/End: Complemental strand, 35534813 - 35534623
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||||||||||| |||| | |||||||||||||||||||||     | ||||| ||||||||| | ||| ||||||||||||| ||||||||||| |||    
T  35534813 gggcctgtttggaaaaacagcttatttgcagcttatagcacaggcgtttatcattataagcgctat-gcataagcttacataagatatttttatag-aaa 35534716  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgt 622  Q
    |||||||||||| || |||||||||||  |||| |||| |||| ||| |||||  |||| ||||| |||  |||| |||| |||||||| |||||    
T  35534715 agataaaataaagttaaattgtttttg--tatgttatatgttgttttcataagttatattggagaacttatgaaagtaagccgaaaaaagcttgt 35534623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 432 - 586
Target Start/End: Original strand, 12976086 - 12976237
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat 531  Q
    |||||||||||||| | ||||||||||||   ||||||    ||||||||||||||||||| || | ||||| ||||||||||||| ||||| |||| ||    
T  12976086 ctgtttggataaacagcttatttgcagct---agcacaggcactcatcatgataagcgcttatgtataagctcacataagctatttctatagcaaaatat 12976182  T
Q  532 aaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||||||| || ||||  |||| ||||||||| || ||| |||||||||| ||||    
T  12976183 aaaataaagttaaattaattttttatatgctacaatttgtttttataagctatat 12976237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 427 - 554
Target Start/End: Complemental strand, 14956500 - 14956373
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||| |||||||||||||   ||||||||||||||||||||||   || |||||||||||| ||| || | |||||| |||||||||||||||| | ||    
T  14956500 agggcttgtttggataaacaacttatttgcagcttatagcacaatcgcttatcatgataagcacttatgtataagcttgcataagctatttttattgtaa 14956401  T
Q  527 aagataaaataaattttaattgtttttg 554  Q
    ||||| ||||||  || |||||||||||    
T  14956400 aagatgaaataacattaaattgtttttg 14956373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 477 - 587
Target Start/End: Original strand, 38750273 - 38750383
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    |||||||||||||||| || | |||||| ||||||||||||||||||  | ||| |||||||  || || |||||||||||||| ||||||||| |||||    
T  38750273 atcatgataagcgcttatgtataagcttgcataagctatttttataggcagagaaaaaataatgttaaaatgtttttgtatatgatataagttgttttta 38750372  T
Q  577 taagcaatatc 587  Q
    ||||| |||||    
T  38750373 taagctatatc 38750383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 499 - 567
Target Start/End: Complemental strand, 12497364 - 12497296
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||||| ||||||| |||||||||| ||||||||||||||| || | ||||||||||||||||||||||    
T  12497364 aagcttgcataagccatttttatagcaaaagataaaataaagttaacttgtttttgtatatgctataag 12497296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 432 - 569
Target Start/End: Original strand, 29205676 - 29205815
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattc--tcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaag 529  Q
    ||||| |||||||| | ||||||||||||||||||| || | |  | | ||||||| ||||| ||| | | | |||  ||| |||||| |||||||||||    
T  29205676 ctgttgggataaacagattatttgcagcttatagcataagtgcgtttagcatgatatgcgctgttgtatatgattatgtaaactatttctatagaaaaag 29205775  T
Q  530 ataaaataaattttaattgtttttgtatatgctataagtt 569  Q
    ||||||| || || ||||||||||||||||||||||||||    
T  29205776 ataaaatgaagttaaattgtttttgtatatgctataagtt 29205815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 477 - 586
Target Start/End: Complemental strand, 10758411 - 10758302
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    ||||||||||| | || || | ||||| || ||| |||||| ||||| |||  |||||||||| || |||||||||||||||||||||||||||  ||||    
T  10758411 atcatgataagtgattatgtataagctcacgtaaactatttctatagcaaatcataaaataaagttaaattgtttttgtatatgctataagttgtcttta 10758312  T
Q  577 taagcaatat 586  Q
    ||||| ||||    
T  10758311 taagctatat 10758302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 427 - 539
Target Start/End: Complemental strand, 36963550 - 36963438
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    |||| |||||||| |||||  |||||||||||||||||||||||   || |||||||||| |||||  | | |||||| | |||||||||| | ||| ||    
T  36963550 agggtctgtttgggtaaacaatttatttgcagcttatagcacaagcgcttatcatgataaacgcttacggataagctttcttaagctatttctctagcaa 36963451  T
Q  527 aagataaaataaa 539  Q
    |||||||||||||    
T  36963450 aagataaaataaa 36963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 513 - 580
Target Start/End: Original strand, 16733980 - 16734047
Alignment:
Q  513 tatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||| ||||| |||||||||| |||| || ||||||||||||||||||||||||||| ||| |||||    
T  16733980 tatttctatagcaaaagataaactaaacttaaattgtttttgtatatgctataagttgttttgataag 16734047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 26771208 - 26771283
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||||||||||| ||||| |||  |||||||||| || |||||||||||||||||||||||| |  |||||||||    
T  26771208 acataagctatttctatagtaaagcataaaataaacttaaattgtttttgtatatgctataagctttttttataag 26771283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 48 - 135
Target Start/End: Complemental strand, 41806353 - 41806266
Alignment:
Q  48 aggaaaaagacctaggagctcgactgaggtagacaaacaaaagccgtgaatcttctaaatgttgcacttaccactgtttttctctctc 135  Q
    ||||||||||  ||||| || || |||||| |||||||| ||||||| |||||||||||| || ||||||| ||||||||| ||||||    
T  41806353 aggaaaaagatgtaggaacttgaatgaggttgacaaacacaagccgtaaatcttctaaatatttcacttactactgtttttttctctc 41806266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 482 - 581
Target Start/End: Complemental strand, 42043495 - 42043396
Alignment:
Q  482 gataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||| ||| || | ||||||||||| ||||||| ||||| ||||||||||||  | || ||||||||||| ||||| ||||||||| ||| ||||||    
T  42043495 gataagcacttatgtataagcttacatatgctatttctatagcaaaagataaaatgcagttaaattgtttttggatatgatataagttgttttcataagc 42043396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 436 - 616
Target Start/End: Complemental strand, 9130506 - 9130322
Alignment:
Q  436 ttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaag---ata 532  Q
    |||||||||  | |||||||||||||||||||||| |  |||||||||||| | ||| || | |||||  |||||||||||||| |||  ||||   |||    
T  9130506 ttggataaatagcttatttgcagcttatagcacaagtggtcatcatgataatcacttatgtataagctcgcataagctatttttgtagctaaagataata 9130407  T
Q  533 aaataaattttaattg-tttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    ||||||  || ||| | ||||| ||||| |||||||||| ||||||||| |||||   ||| |||| |||||||||  |||||||    
T  9130406 aaataacgttaaatggttttttatatattctataagttgtttttataagtaatattaaagaacttgtgaaaataagttgaaaaaa 9130322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 25930687 - 25930605
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||||||||||| ||||| ||| ||| ||||||| || || |||||||||||||||| ||| ||| ||| ||||||    
T  25930687 aagcttacataagctatttctataggaaaggatgaaataaaattaaaatgtttttgtatatgctttaaattgttttcataagc 25930605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 165 - 215
Target Start/End: Complemental strand, 41800086 - 41800036
Alignment:
Q  165 agattcttctggttatttgattttataggtccccaagaacaagaggaatgt 215  Q
    ||||||| ||||||||||||||||||||||||| ||||||||| |||||||    
T  41800086 agattctcctggttatttgattttataggtcccgaagaacaaggggaatgt 41800036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 434 - 567
Target Start/End: Complemental strand, 29168250 - 29168122
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataa 533  Q
    ||||||||| || | |||| |||||||||||||||||    | ||||| | ||| |||| || | ||||| ||||||||||||| ||||| |||||||||    
T  29168250 gtttggatacacaggttatctgcagcttatagcacaagcgtttatcatcaaaagtgcttatgtataagctcacataagctatttctatagcaaaagataa 29168151  T
Q  534 aataaattttaattgtttttgtatatgctataag 567  Q
    |||||     |||| |||||||||||||||||||    
T  29168150 aataa-----aattatttttgtatatgctataag 29168122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 161 - 280
Target Start/End: Complemental strand, 41806212 - 41806093
Alignment:
Q  161 tgtgagattcttctggttatttgattttataggtccccaagaacaagaggaatgttaaatgcatgaagaatatgagatgtggttttataagcacagaa-a 259  Q
    ||||||||||| || ||||||||||||||||||||||   |||||||| ||||||||| || |  |||||| | ||| | | || ||||||||| ||| |    
T  41806212 tgtgagattctccttgttatttgattttataggtcccgcggaacaaga-gaatgttaactgtagaaagaatgtaagacgggcttctataagcactgaaga 41806114  T
Q  260 gaatacaagtcctggttctca 280  Q
    ||||||| |||||||||||||    
T  41806113 gaatacacgtcctggttctca 41806093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 516 - 623
Target Start/End: Original strand, 38602288 - 38602394
Alignment:
Q  516 ttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaa 615  Q
    |||||||||||| |||||||| || || ||||| ||||| |||||||||||| || |||||||||| |||  |||||  ||| ||||||||| ||||||     
T  38602288 ttttatagaaaa-gataaaatgaagttaaattgcttttgcatatgctataagctgtttttataagctatactggagaatttgtgaaaataagccgaaaac 38602386  T
Q  616 atcttgtg 623  Q
    | ||||||    
T  38602387 agcttgtg 38602394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 454 - 538
Target Start/End: Original strand, 38353242 - 38353325
Alignment:
Q  454 tgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataa 538  Q
    |||||||||||  |||| | || |||||||||| ||||| || | |||||| |||||||||||||||| | ||||||||||||||    
T  38353242 tgcagcttatattacaagtgcttatcatgataatcgcttatgtataagcttgcataagctatttttat-gcaaaagataaaataa 38353325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 581
Target Start/End: Original strand, 11861744 - 11861823
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||| ||||||||||||| ||||| |||  | |||||||| || ||||  ||||||||||||||||||||| ||||||||||    
T  11861744 aagctcacataagctatttctatagcaaagaacaaaataaagtt-aatt--ttttgtatatgctataagttgtttttataagc 11861823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 499 - 538
Target Start/End: Original strand, 32975997 - 32976036
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataa 538  Q
    |||||| |||||||||||||||||| ||||||||||||||    
T  32975997 aagcttgcataagctatttttatagcaaaagataaaataa 32976036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 431 - 470
Target Start/End: Original strand, 40980999 - 40981038
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaa 470  Q
    ||||||||||||||| | ||||||||||||||||||||||    
T  40980999 cctgtttggataaacagcttatttgcagcttatagcacaa 40981038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 290
Target Start/End: Complemental strand, 41800041 - 41799978
Alignment:
Q  228 gaatatgagatgtggttttataagcacagaa-agaatacaagtcctggttctcaagatcagacc 290  Q
    |||| ||||||||| || ||||||||| ||| | |||||||||||||||||||| |||||||||    
T  41800041 gaatgtgagatgtgcttctataagcactgaagaaaatacaagtcctggttctcaggatcagacc 41799978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 592
Target Start/End: Original strand, 10114435 - 10114519
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||||||||||| ||||| |||||||||||| || || ||||||||| ||||| |||||||| || ||| || ||| |||| |||||    
T  10114435 ataagctatttctatagcaaaagataaaat-aagttgaattgttttggtataagctataagctgttttcattagctatattggaga 10114519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 485 - 570
Target Start/End: Complemental strand, 16825684 - 16825599
Alignment:
Q  485 aagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttg 570  Q
    |||||||| || | || ||| ||||||||||| |||||| ||| ||||||||||  || |||||||||||| || | |||||||||    
T  16825684 aagcgcttatgtataaccttgcataagctattcttatagtaaaggataaaataatgttaaattgtttttgtttacgttataagttg 16825599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 522
Target Start/End: Original strand, 27028754 - 27028799
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttata 522  Q
    ||||||||||| ||||||| | ||||||||||||| ||||||||||    
T  27028754 atcatgataagtgcttttgtataagcttacataagttatttttata 27028799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 567
Target Start/End: Original strand, 4558743 - 4558803
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||||| ||||  ||||||||||||||| || |||| ||||  |||||||||||||    
T  4558743 ataagctatttctataataaaagataaaataaagttaaattattttcatatatgctataag 4558803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 579
Target Start/End: Original strand, 16736029 - 16736101
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    |||| ||||||| |||| ||||||||||||||  || ||| ||||||||| ||| |||||||||  |||||||    
T  16736029 ataaactattttgatagcaaaagataaaataacattaaatagtttttgtacatgttataagttgtctttataa 16736101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 423 - 467
Target Start/End: Complemental strand, 29819089 - 29819045
Alignment:
Q  423 agttagggcctgtttggataaacggtttatttgcagcttatagca 467  Q
    |||||||| ||||||||||||||   |||||||||||||||||||    
T  29819089 agttagggtctgtttggataaacaacttatttgcagcttatagca 29819045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 51 - 107
Target Start/End: Complemental strand, 41800224 - 41800168
Alignment:
Q  51 aaaaagacctaggagctcgactgaggtagacaaacaaaagccgtgaatcttctaaat 107  Q
    |||||||  ||||||||| |  |||||||| ||||| ||||||||||||||||||||    
T  41800224 aaaaagatgtaggagctcaaacgaggtagaaaaacacaagccgtgaatcttctaaat 41800168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 2e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 431 - 581
Target Start/End: Original strand, 24626164 - 24626314
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaaga 530  Q
    |||||||||||||||   |||||| ||||||||||||||||| || |||||||| |  |||| || | ||||||||||||||||||| ||||| ||| ||    
T  24626164 cctgtttggataaacaacttatttacagcttatagcacaaatgcttatcatgatgattgcttatgtataagcttacataagctatttctataggaaagga 24626263  T
Q  531 taaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||| ||| || |||||||||||||||| |||||||||| ||| ||||||    
T  24626264 taaaacaaagttaaattgtttttgtatattctataagttgttttcataagc 24626314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 591
Target Start/End: Original strand, 8147618 - 8147731
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    ||||||||||||||||  ||| ||||| ||||||||||||||||||| ||||||||||||||| || |||||||||||||||| ||| ||| || ||| |    
T  8147618 atcatgataagcgcttaagcataagct-acataagctatttttatagcaaaagataaaataaagttgaattgtttttgtatattctaaaagatgttttca 8147716  T
Q  577 taagcaatatcggag 591  Q
    ||||| |||| ||||    
T  8147717 taagctatattggag 8147731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 586
Target Start/End: Original strand, 18076083 - 18076220
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattg 548  Q
    ||||||||||||||||||||||   || ||||| |||||| ||| || | |||||| |||||| ||||||||||| |||||| |||||||  || |||||    
T  18076083 ttatttgcagcttatagcacaagcgcttatcataataagcacttatgtataagcttgcataagttatttttatagcaaaagagaaaataaggttaaattg 18076182  T
Q  549 tttttgtatatgctataagttgcttttataagcaatat 586  Q
    ||||| ||  |||||||||||| |||||||||| ||||    
T  18076183 tttttctaattgctataagttgtttttataagctatat 18076220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 428 - 592
Target Start/End: Original strand, 6538383 - 6538542
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    |||||||||||||||||  | ||||||||||||||||||||||   || || ||||||||||||| || | |||||| |||||| || |||| ||| |||    
T  6538383 gggcctgtttggataaatagcttatttgcagcttatagcacaagcacttataatgataagcgcttatgtataagcttgcataagttagttttttagcaaa 6538482  T
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    ||     ||||  || |||||||| |||||||||||||||||| ||||||| || |||| |||||    
T  6538483 ag-----ataatgttaaattgtttatgtatatgctataagttgtttttataggctatattggaga 6538542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 477 - 579
Target Start/End: Complemental strand, 6910028 - 6909925
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaa-taaattttaattgtttttgtatatgctataagttgctttt 575  Q
    ||||||||||| |||| || | || |||||||||||||||| ||||| |||||| |||| |||| || ||||||||||||||||||||||||||| |||     
T  6910028 atcatgataagtgcttatgtataaacttacataagctatttctataggaaaagaaaaaaataaagttaaattgtttttgtatatgctataagttgttttc 6909929  T
Q  576 ataa 579  Q
    ||||    
T  6909928 ataa 6909925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 4163118 - 4163193
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||||||||||||||||||| |||||||||||| || |||||||| |||||||| |||||| |  |||||||||    
T  4163118 acataagctatttttatagaaatagataaaataaagttaaattgtttgtgtatatgttataagctatttttataag 4163193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 580
Target Start/End: Original strand, 4224739 - 4224814
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||||||||||||||||||| |||||||||||| || |||||||| |||||||| |||||| |  |||||||||    
T  4224739 acataagctatttttatagaaatagataaaataaagttaaattgtttgtgtatatgttataagctatttttataag 4224814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 489 - 603
Target Start/End: Original strand, 31623487 - 31623601
Alignment:
Q  489 gcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcg 588  Q
    |||| |||| |||||||||| ||||||||||||||||||||||||||| |  || ||||| | |||| ||||||||||| || |||||||  | |||| |    
T  31623487 gcttatgcataagcttacattagctatttttatagaaaaagataaaatgacgttaaattgctcttgtgtatgctataagctgtttttatacactatattg 31623586  T
Q  589 gagatcttgagaaaa 603  Q
    |||| ||| ||||||    
T  31623587 gagaacttaagaaaa 31623601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 451 - 552
Target Start/End: Complemental strand, 35070812 - 35070710
Alignment:
Q  451 atttgcagcttatagcacaaattctcatcatgataagcgcttttgc-acaagcttacataagctatttttatagaaaaagataaaataaattttaattgt 549  Q
    ||||||| ||||||||||||   ||  ||||||||||| ||  ||| | ||||||||||||||||||||||||||||||||||||||||| |  ||||||    
T  35070812 atttgcaccttatagcacaagcacttgtcatgataagcactaatgctataagcttacataagctatttttatagaaaaagataaaataaaataaaattgt 35070713  T
Q  550 ttt 552  Q
    |||    
T  35070712 ttt 35070710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 483 - 579
Target Start/End: Original strand, 6200480 - 6200576
Alignment:
Q  483 ataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    |||||||||| |||| ||| ||  |||||||| |||||||| ||||| ||||||||   | |||| |||||||||||||||||| ||| ||||||||    
T  6200480 ataagcgcttatgcataagtttgtataagctacttttatagtaaaaggtaaaataatgatgaattatttttgtatatgctataacttgtttttataa 6200576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 427 - 515
Target Start/End: Original strand, 34430581 - 34430669
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctat 515  Q
    ||||| ||||| |||||||   |||||||||||||||||||||| | || ||||||||| |||||| || | |||||| ||||||||||    
T  34430581 agggcatgtttcgataaacatcttatttgcagcttatagcacaagtgcttatcatgataggcgcttatgtataagcttccataagctat 34430669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 542 - 629
Target Start/End: Original strand, 6536595 - 6536682
Alignment:
Q  542 ttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    ||||||||||||||||||||||||||||| ||||| |||| |||| |||||  ||  |||||||||  ||||||| ||| || |||||    
T  6536595 ttaattgtttttgtatatgctataagttgtttttagaagctatattggagaatttatgaaaataagttgaaaaaagcttatgaaaatt 6536682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 507 - 581
Target Start/End: Complemental strand, 9093681 - 9093607
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||| ||||  ||||||||||||||| || ||||||||| ||||| |||||||| || ||| ||||||    
T  9093681 ataagctatttctatatcaaaagataaaataaagttaaattgttttcgtataagctataagctgttttcataagc 9093607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 455 - 534
Target Start/End: Original strand, 30926431 - 30926510
Alignment:
Q  455 gcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaa 534  Q
    ||||||||||||||||   || ||||||||||||  ||  | | ||||||||||||||||||| ||||| ||||||||||    
T  30926431 gcagcttatagcacaagggcttatcatgataagcaattaagtataagcttacataagctatttctatagtaaaagataaa 30926510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 503 - 568
Target Start/End: Original strand, 18690435 - 18690501
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattg-tttttgtatatgctataagt 568  Q
    ||||||||| || |||||||| ||| |||||||||||||| || || ||||| ||||||||||||||    
T  18690435 ttacataaggtacttttatagcaaaggataaaataaatttaaactgttttttatatatgctataagt 18690501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 507 - 581
Target Start/End: Complemental strand, 20368305 - 20368231
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    ||||||||||| ||||||||| | |||||| || || ||||||||||||||  | ||||||||| ||| ||||||    
T  20368305 ataagctatttatatagaaaatgctaaaatgaagttgaattgtttttgtatgagttataagttgttttcataagc 20368231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 477 - 559
Target Start/End: Original strand, 30536393 - 30536475
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatat 559  Q
    ||||||||||  |||| || | ||| || ||||||||||| |||||| ||| ||||||||||  || ||||||||||||||||    
T  30536393 atcatgataaaagcttatgtataagtttgcataagctattattatagcaaatgataaaataatgttaaattgtttttgtatat 30536475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 499 - 553
Target Start/End: Complemental strand, 30536691 - 30536637
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgttttt 553  Q
    |||||| |||||||||||||||||| ||||||||| ||||  || ||||||||||    
T  30536691 aagcttgcataagctatttttatagcaaaagataagataacgttaaattgttttt 30536637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 492
Target Start/End: Original strand, 264250 - 264311
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    ||||||||||| ||| | | |||||||||||||||||||| | || ||||||||||| ||||    
T  264250 cctgtttggattaacagctaatttgcagcttatagcacaagtgcttatcatgataagtgctt 264311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 528 - 581
Target Start/End: Original strand, 415270 - 415323
Alignment:
Q  528 agataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||| ||| || ||||||||| ||||| ||||||||||| ||||||||||    
T  415270 agataaaacaaagttaaattgttttcgtataagctataagttgtttttataagc 415323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 564
Target Start/End: Original strand, 2206535 - 2206592
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctat 564  Q
    ||||| ||||||||||  ||||||||||||||| | ||||||||||| |||| |||||    
T  2206535 ataagttatttttataacaaaagataaaataaagtataattgtttttatataagctat 2206592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 584
Target Start/End: Original strand, 2735014 - 2735091
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaat 584  Q
    ||||||||| | ||||  ||||||||||||||| || |||| ||||||||||  ||||||| || ||| |||||||||    
T  2735014 ataagctatgtctataacaaaagataaaataaagttaaattatttttgtataatctataagctgttttcataagcaat 2735091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 580
Target Start/End: Original strand, 8201170 - 8201251
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||||| |||| | ||||||||| |  ||||||||| |||  || |||||||||||| ||| |||||||||| |||||||||    
T  8201170 aagcttgcatatgttatttttattgtcaaagataaattaacattaaattgtttttgtgtatcctataagttgtttttataag 8201251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 552
Target Start/End: Complemental strand, 9559666 - 9559621
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttt 552  Q
    ||||| ||||| ||||| |||||||||||||||||| |||||||||    
T  9559666 ataagttatttctatagcaaaagataaaataaatttaaattgtttt 9559621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 499 - 581
Target Start/End: Original strand, 35098972 - 35099056
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaatt--ttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||  |||||||||| ||||| |||| | | || |||||  ||||||||||||||||||| ||||||||| ||| ||||||    
T  35098972 aagcttaagtaagctatttctataggaaaaaaaataaaaaattgtttaattgtttttgtatatgttataagttgttttcataagc 35099056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 431 - 487
Target Start/End: Complemental strand, 658636 - 658580
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataag 487  Q
    |||||||||||||||  ||||||| || |||||||||||| | || |||||||||||    
T  658636 cctgtttggataaactatttattttcaacttatagcacaagtacttatcatgataag 658580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 433 - 493
Target Start/End: Original strand, 2455145 - 2455205
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttt 493  Q
    ||||||||| |||  |||||||||||||||| |||||| | |||||| | |||||||||||    
T  2455145 tgtttggatgaacaatttatttgcagcttatggcacaagtgctcatcgtaataagcgcttt 2455205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 460 - 592
Target Start/End: Complemental strand, 6016547 - 6016415
Alignment:
Q  460 ttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatat 559  Q
    |||||| |||||  || |||| ||||||||||| |  | || ||| |||||| |||||| |||  ||||||||||||||| || ||||||||||  ||||    
T  6016547 ttatagaacaaacacttatcacgataagcgcttatatataatcttgcataagttattttcataacaaaagataaaataaagttcaattgttttttaatat 6016448  T
Q  560 gctataagttgcttttataagcaatatcggaga 592  Q
     ||| | |||| |||||||| | |||| |||||    
T  6016447 tctacatgttgtttttataaactatattggaga 6016415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 544 - 592
Target Start/End: Complemental strand, 11784118 - 11784070
Alignment:
Q  544 aattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||||||||||||||||||||| || ||| |||||| |||| |||||    
T  11784118 aattgtttttgtatatgctataagctgttttcataagctatattggaga 11784070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 515 - 563
Target Start/End: Complemental strand, 28621227 - 28621179
Alignment:
Q  515 tttttatagaaaaagataaaataaattttaattgtttttgtatatgcta 563  Q
    ||||||||  ||||||||||||||| || ||||||||||||||| ||||    
T  28621227 tttttataacaaaagataaaataaagttaaattgtttttgtataagcta 28621179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 61; Significance: 7e-26; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 427 - 539
Target Start/End: Original strand, 157972 - 158084
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||||||||||||||||| | |||||||||||||||||||||||  || || |||||||  |||| ||||  |||||||||||||||||||||||||||    
T  157972 agggcctgtttggataaacagcttatttgcagcttatagcacaaacacttatgatgataattgcttatgcattagcttacataagctatttttatagaaa 158071  T
Q  527 aagataaaataaa 539  Q
    || ||||| ||||    
T  158072 aacataaattaaa 158084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 59; Significance: 1e-24; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 179 - 296
Target Start/End: Original strand, 278604 - 278722
Alignment:
Q  179 atttgattttataggtccccaagaacaagaggaatgttaaatgcatgaagaatatgagatgtggttttataagcacagaa-agaatacaagtcctggttc 277  Q
    ||||||| ||||||||||| ||||||||||||||||||||||| | |||||  || || |||| || ||||||||| ||| ||||||||||| |||||||    
T  278604 atttgatattataggtcccaaagaacaagaggaatgttaaatgtaggaagatgattaggtgtgcttctataagcactgaagagaatacaagtactggttc 278703  T
Q  278 tcaagatcagaccttaagc 296  Q
    ||| |||||||||||||||    
T  278704 tcaggatcagaccttaagc 278722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 499 - 606
Target Start/End: Complemental strand, 16458111 - 16458005
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttga 598  Q
    |||||| |||||||||||||||||| |||||||||||||| ||  ||||||||||||||||||||||||||| |||||| ||| | || ||||| ||||     
T  16458111 aagcttgcataagctatttttatagcaaaagataaaataactta-aattgtttttgtatatgctataagttgtttttatgagctaaattggagaacttgt 16458013  T
Q  599 gaaaataa 606  Q
    ||||||||    
T  16458012 gaaaataa 16458005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 428 - 557
Target Start/End: Complemental strand, 3735695 - 3735566
Alignment:
Q  428 gggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||||||||||||||||    |||||||||||||||||||||    | |||||||||||||||| || | ||||||||||||||||||| ||||| |||    
T  3735695 gggcctgtttggataaacaacctatttgcagcttatagcacaagagattatcatgataagcgcttatggataagcttacataagctatttctatagcaaa 3735596  T
Q  528 agataaaataaattttaattgtttttgtat 557  Q
    |||| ||||||| || | || |||||||||    
T  3735595 agatgaaataaagttaatttttttttgtat 3735566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 427 - 567
Target Start/End: Original strand, 32372489 - 32372629
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||| |||||||||||||   ||||||||||||||||||||||   || |||||||||||| ||| || | |  ||||||||| ||||| |||||| |     
T  32372489 agggcatgtttggataaacaacttatttgcagcttatagcacaagcacttatcatgataagcccttatgtatacacttacataaactattattatagcac 32372588  T
Q  527 aagataaaataaattttaattgtttttgtatatgctataag 567  Q
      ||||||||||| || ||||||||||||||||||||||||    
T  32372589 ctgataaaataaagttgaattgtttttgtatatgctataag 32372629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 34102448 - 34102365
Alignment:
Q  499 aagcttacataagctatttttatagaaaaa-gataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||||||||||||||||| | ||||| ||||||||||  || | ||||||||||||||||||||||||| ||||||||||    
T  34102448 aagcttacataagctatttttaaacaaaaaagataaaataatgttaatttgtttttgtatatgctataagttgtttttataagc 34102365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 499 - 566
Target Start/End: Original strand, 35445992 - 35446059
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    ||||||||||||||||||||||||| ||| ||||||||||| || ||||||||||||||| |||||||    
T  35445992 aagcttacataagctatttttatagcaaatgataaaataaagttaaattgtttttgtatacgctataa 35446059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 433 - 586
Target Start/End: Complemental strand, 24030601 - 24030447
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    ||||||||||||| | ||||||||||||||||||||||   || ||||||||||| ||   || | ||||| ||||||||||||  ||||| ||  ||||    
T  24030601 tgtttggataaacagcttatttgcagcttatagcacaagcacttatcatgataagtgcgcgtgtataagctcacataagctattgctatagcaaccgata 24030502  T
Q  533 aaataaattttaatt-gtttttgtatatgctataagttgcttttataagcaatat 586  Q
    ||||||| || ||||  |||||| ||||| ||||||||| |||||||||| ||||    
T  24030501 aaataaagttaaattattttttggatatgttataagttgtttttataagctatat 24030447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 503 - 559
Target Start/End: Complemental strand, 3932814 - 3932758
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatat 559  Q
    ||||||||||||||||||||| |||||||||||| || |||||||||||||||||||    
T  3932814 ttacataagctatttttatagcaaaagataaaatgaagtttaattgtttttgtatat 3932758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 525 - 616
Target Start/End: Complemental strand, 16937990 - 16937899
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataaggcgaaaaaa 616  Q
    ||||||||||||||  || ||||||||||||||||||||||||||| ||||||| || |||| ||||| |||  |||||||||  |||||||    
T  16937990 aaaagataaaataacgttaaattgtttttgtatatgctataagttgtttttatacgctatattggagaacttaggaaaataagctgaaaaaa 16937899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 426 - 581
Target Start/End: Original strand, 25460956 - 25461110
Alignment:
Q  426 tagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaa 525  Q
    |||||| ||||||||||||| | |||| |  ||||||||||| ||   || ||||||||||| |||| |  | |||||| | |||||||||||| ||| |    
T  25460956 tagggcatgtttggataaacagcttatatttagcttatagcataagcacttatcatgataagagcttatatataagcttgcgtaagctatttttctagca 25461055  T
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||| ||||||| ||  |||||||||||||||| ||||||||| ||| ||||||    
T  25461056 aaagat-aaataaagttgtattgtttttgtatatgttataagttgttttcataagc 25461110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 501 - 616
Target Start/End: Original strand, 29925780 - 29925895
Alignment:
Q  501 gcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgaga 600  Q
    |||| |||||||||||||||||| |||||||||||||   || |||||||| ||||| |||||||||||| ||  |||||| |||| ||||| |||  ||    
T  29925780 gcttgcataagctatttttatagcaaaagataaaatagcgttaaattgtttctgtatgtgctataagttgtttacataagctatattggagaacttatga 29925879  T
Q  601 aaataaggcgaaaaaa 616  Q
    |||||||  |||||||    
T  29925880 aaataagttgaaaaaa 29925895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 434 - 552
Target Start/End: Complemental strand, 7319209 - 7319091
Alignment:
Q  434 gtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataa 533  Q
    ||||| |||||| | |||||| |||||||||||||||   || |||||||||||| ||| |||| ||||||||||||||||||| ||  | |||| ||||    
T  7319209 gtttgaataaacagcttatttacagcttatagcacaagcgcttatcatgataagcacttatgcataagcttacataagctatttctaacgcaaaatataa 7319110  T
Q  534 aataaattttaattgtttt 552  Q
    |||||| |  |||||||||    
T  7319109 aataaagtgaaattgtttt 7319091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 515 - 592
Target Start/End: Original strand, 32009645 - 32009722
Alignment:
Q  515 tttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggaga 592  Q
    |||||||||||||| ||||||| || || ||||||| ||||||||||||||| ||| |||||||||| |||| |||||    
T  32009645 tttttatagaaaaacataaaatgaagttgaattgttcttgtatatgctataaattgtttttataagctatattggaga 32009722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 539
Target Start/End: Original strand, 12554334 - 12554440
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    |||||||||||||   |||||||||||||| ||||||||  || || ||||||||   ||  ||| |||||| |||||||||||||||||| ||| ||||    
T  12554334 tgtttggataaacaacttatttgcagcttaaagcacaaacgcttattatgataagtatttacgcataagcttccataagctatttttatagtaaatgata 12554433  T
Q  533 aaataaa 539  Q
    |||||||    
T  12554434 aaataaa 12554440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 433 - 567
Target Start/End: Complemental strand, 26005437 - 26005303
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    |||||||||||||   ||||| | |||||||||||||||  || || |||||||  |||| || | |||||| |||||||||||| |||   ||||||||    
T  26005437 tgtttggataaacaacttattagaagcttatagcacaaacacttattatgataattgcttatgtataagcttgcataagctatttctattttaaaagata 26005338  T
Q  533 aaataaattttaattgtttttgtatatgctataag 567  Q
    |||| || |||||||||||||  |||| |||||||    
T  26005337 aaattaagtttaattgtttttaaatatactataag 26005303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 503 - 556
Target Start/End: Original strand, 9107053 - 9107106
Alignment:
Q  503 ttacataagctatttttatagaaaaagataaaataaattttaattgtttttgta 556  Q
    |||||||||||||||||| |||||||||||||||||| || |||| ||||||||    
T  9107053 ttacataagctatttttaaagaaaaagataaaataaagttaaattatttttgta 9107106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 425 - 530
Target Start/End: Complemental strand, 7706186 - 7706078
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaa----gcttacataagctattttta 520  Q
    |||||||||||||| ||||||   |||||||||| ||||||||||| | || ||||||||| |  ||| |||| ||    ||||||||||||||||||||    
T  7706186 ttagggcctgtttgtataaacaacttatttgcaggttatagcacaagtgcttatcatgata-gtacttatgcataaataagcttacataagctattttta 7706088  T
Q  521 tagaaaaaga 530  Q
    ||||||||||    
T  7706087 tagaaaaaga 7706078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 436 - 488
Target Start/End: Complemental strand, 19460572 - 19460520
Alignment:
Q  436 ttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagc 488  Q
    |||||||||| | |||||||||||||||||||||||| || ||||||||||||    
T  19460572 ttggataaacagcttatttgcagcttatagcacaaatgcttatcatgataagc 19460520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 457 - 569
Target Start/End: Complemental strand, 34669902 - 34669790
Alignment:
Q  457 agcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgta 556  Q
    |||||||||||||| |||| |||||||||||| ||| |    | |||||| |||  ||||| ||||||| |||||||||| || || |||||||||||||    
T  34669902 agcttatagcacaagttcttatcatgataagcacttatttttatgcttacctaaattatttctatagaacaagataaaatgaaattaaattgtttttgta 34669803  T
Q  557 tatgctataagtt 569  Q
     ||||| ||||||    
T  34669802 catgctctaagtt 34669790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 499 - 555
Target Start/End: Complemental strand, 42500358 - 42500302
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgt 555  Q
    |||||| |||||||||||||||||  ||||||||||||||| || ||||||||||||    
T  42500358 aagcttgcataagctatttttatatcaaaagataaaataaagttaaattgtttttgt 42500302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 459 - 586
Target Start/End: Original strand, 1130866 - 1130992
Alignment:
Q  459 cttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtata 558  Q
    |||||||||||||   | || ||||||||||||| || | ||||||| |||||| |||| ||||| |||| |||||||||| || |  ||||||| ||||    
T  1130866 cttatagcacaaacatttattatgataagcgcttgtgtataagcttatataagccatttctatag-aaaatataaaataaagttaatctgtttttatata 1130964  T
Q  559 tgctataagttgcttttataagcaatat 586  Q
     ||||||||||  |||||||||| ||||    
T  1130965 ggctataagttaattttataagctatat 1130992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 433 - 560
Target Start/End: Original strand, 10639825 - 10639951
Alignment:
Q  433 tgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagata 532  Q
    ||||||||||||| | ||||||||| |||| |||| || |  | |||| ||||||| ||| || | |||  || ||||||||||| ||||| ||||||||    
T  10639825 tgtttggataaacagcttatttgcaactta-agcaaaagtggttatcacgataagcacttatgtataagtctatataagctatttctatagcaaaagata 10639923  T
Q  533 aaataaattttaattgtttttgtatatg 560  Q
    |||| || || |||||||||||||||||    
T  10639924 aaattaaattaaattgtttttgtatatg 10639951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 427 - 534
Target Start/End: Complemental strand, 25461960 - 25461853
Alignment:
Q  427 agggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaa 526  Q
    ||||||||||||||||| | | ||||||| |||||||| |||||   || ||||||||||| | || |  | |||||| |||||||||||||||||| |     
T  25461960 agggcctgtttggataagcaggttatttgtagcttataacacaagcgcttatcatgataagtggttatatataagcttgcataagctatttttatagcag 25461861  T
Q  527 aagataaa 534  Q
    ||||||||    
T  25461860 aagataaa 25461853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 499 - 586
Target Start/End: Original strand, 36227732 - 36227819
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatat 586  Q
    |||||| | ||| |||||||||||| |||||||||||||   || ||||| |||||||||   |||||||||||||||||||| ||||    
T  36227732 aagcttgcttaatctatttttatagcaaaagataaaatagcgttaaattgattttgtatacaatataagttgcttttataagctatat 36227819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 371 - 425
Target Start/End: Original strand, 278823 - 278877
Alignment:
Q  371 aatcaatatctagtagaggtcctgctactgatccagatagtctctattcaagagt 425  Q
    |||||| |||||||||||||||||||||||||||| | || |||||| |||||||    
T  278823 aatcaagatctagtagaggtcctgctactgatccacagagcctctatgcaagagt 278877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 485 - 539
Target Start/End: Complemental strand, 2973665 - 2973612
Alignment:
Q  485 aagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaa 539  Q
    |||||||| |||| |||||||||||||| ||||| ||||||||||||||||||||    
T  2973665 aagcgcttctgcataagcttacataagccatttt-atagaaaaagataaaataaa 2973612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 538
Target Start/End: Complemental strand, 13697959 - 13697853
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagat 531  Q
    ||||||||||||||   |||||||||||||||| || ||    | ||||||||||| | ||||||| || ||| |||||  ||||||||||| |||||||    
T  13697959 ctgtttggataaacaacttatttgcagcttataacataagcatttatcatgataagtgattttgcataaacttgcataaattatttttatagcaaaagat 13697860  T
Q  532 aaaataa 538  Q
    |||||||    
T  13697859 aaaataa 13697853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 499 - 581
Target Start/End: Complemental strand, 25461779 - 25461698
Alignment:
Q  499 aagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||| |||||||||||||||||| ||||||| |||||   || ||||| ||| ||||||| ||||||||| ||||||||||    
T  25461779 aagcttgcataagctatttttatagcaaaagat-aaatatcgttaaattggtttagtatatgttataagttgtttttataagc 25461698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 477 - 538
Target Start/End: Original strand, 32009905 - 32009967
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatag-aaaaagataaaataa 538  Q
    ||||||||| ||| || |||| |||||||| |||||||||||||||| |||||||||||||||    
T  32009905 atcatgatatgcgattatgcataagcttacgtaagctatttttatagaaaaaagataaaataa 32009967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 432 - 567
Target Start/End: Original strand, 40426632 - 40426770
Alignment:
Q  432 ctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcg----cttttgcacaagcttacataagctatttttatagaaaa 527  Q
    ||||||||||||||   | ||||||||||||||||||||   || ||||||||||||     ||| |  |||||||||||| || |||||| |||| |||    
T  40426632 ctgtttggataaacaactcatttgcagcttatagcacaagcacttatcatgataagcatgcacttatatacaagcttacatgagttatttt-atagcaaa 40426730  T
Q  528 agataaaataaattttaattgtttttgtatatgctataag 567  Q
    ||||||||||||  | |||||||||||||| |||| ||||    
T  40426731 agataaaataaagctaaattgtttttgtatttgctgtaag 40426770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 526 - 607
Target Start/End: Complemental strand, 6587213 - 6587132
Alignment:
Q  526 aaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttgagaaaataag 607  Q
    |||||| ||||||| || ||||||||| ||||| ||||||||||| ||| |||||| |||  ||||| |||| |||||||||    
T  6587213 aaagattaaataaacttcaattgttttcgtataagctataagttgttttcataagctatagtggagaacttgtgaaaataag 6587132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 507 - 580
Target Start/End: Original strand, 14932235 - 14932307
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    |||| |||||||||||| ||||||||||||||| || ||||| ||||||||| |||||||| || | |||||||    
T  14932235 ataatctatttttatagcaaaagataaaataaagttaaattg-ttttgtataagctataagctgttgttataag 14932307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 509 - 566
Target Start/End: Complemental strand, 42569103 - 42569046
Alignment:
Q  509 aagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    ||||||||| ||||| ||||||||||||||| | |||||||||| ||||| |||||||    
T  42569103 aagctatttctatagcaaaagataaaataaagtctaattgttttcgtataagctataa 42569046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 485 - 581
Target Start/End: Original strand, 6521028 - 6521123
Alignment:
Q  485 aagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataagc 581  Q
    |||||||| |||| |||||| ||||| ||| |||||||||||| | | |||||||  | |||| |||||||||||||| |||| || ||||||||||    
T  6521028 aagcgcttatgcataagctttcataaactacttttatagaaaatg-ttaaataaagataaattatttttgtatatgctgtaagctgtttttataagc 6521123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 507 - 567
Target Start/End: Original strand, 12425516 - 12425576
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataag 567  Q
    |||| |||||| ||||| ||||||||||||||| || ||||||||| ||||| ||||||||    
T  12425516 ataaactatttatatagtaaaagataaaataaagttaaattgttttcgtataagctataag 12425576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 477 - 629
Target Start/End: Complemental strand, 12857492 - 12857341
Alignment:
Q  477 atcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgctttta 576  Q
    ||||| |||||| ||| |||| ||||||| || | |||||||||||| ||| |||||||| || ||   || |||||||| ||||||| || || |||||    
T  12857492 atcatcataagcacttatgcataagcttatattaactatttttatag-aaatgataaaatgaagttgtgttatttttgtacatgctattagctgatttta 12857394  T
Q  577 taagcaatatcggagatcttgagaaaataaggcgaaaaaatcttgtgcaaatt 629  Q
    ||||| |||| ||||| |||   ||||||||  ||||||| |||||| |||||    
T  12857393 taagctatattggagaacttacaaaaataagctgaaaaaagcttgtgaaaatt 12857341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 544 - 579
Target Start/End: Original strand, 12554501 - 12554536
Alignment:
Q  544 aattgtttttgtatatgctataagttgcttttataa 579  Q
    ||||||||||||||||||||||||||| ||||||||    
T  12554501 aattgtttttgtatatgctataagttgtttttataa 12554536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 505 - 539
Target Start/End: Original strand, 39594751 - 39594785
Alignment:
Q  505 acataagctatttttatagaaaaagataaaataaa 539  Q
    ||||||||||||| |||||||||||||||||||||    
T  39594751 acataagctatttctatagaaaaagataaaataaa 39594785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 527 - 565
Target Start/End: Complemental strand, 42582798 - 42582760
Alignment:
Q  527 aagataaaataaattttaattgtttttgtatatgctata 565  Q
    |||||||||||||||| |||| |||||||||||||||||    
T  42582798 aagataaaataaatttaaattatttttgtatatgctata 42582760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 425 - 484
Target Start/End: Complemental strand, 3569153 - 3569097
Alignment:
Q  425 ttagggcctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgat 484  Q
    |||||||||||||||||    ||||||||||||||||||||||||| | || ||||||||    
T  3569153 ttagggcctgtttggatt---ggtttatttgcagcttatagcacaagtgcttatcatgat 3569097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 552
Target Start/End: Original strand, 7674593 - 7674638
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttt 552  Q
    ||||||||||| ||||  |||||||||||||||||| |||||||||    
T  7674593 ataagctatttctataccaaaagataaaataaatttaaattgtttt 7674638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 431 - 492
Target Start/End: Complemental strand, 9202939 - 9202878
Alignment:
Q  431 cctgtttggataaacggtttatttgcagcttatagcacaaattctcatcatgataagcgctt 492  Q
    |||||||||||||||   |||||||||||||||||||||| |  | ||||||||||| ||||    
T  9202939 cctgtttggataaacatcttatttgcagcttatagcacaagtgtttatcatgataagtgctt 9202878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 507 - 580
Target Start/End: Complemental strand, 12595576 - 12595503
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataag 580  Q
    ||||||||||| ||||| |||||||||||||||||  ||| ||||| |||||   |||||| || |||||||||    
T  12595576 ataagctatttctatagcaaaagataaaataaattcaaatagttttcgtataaattataagctgattttataag 12595503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 449 - 538
Target Start/End: Original strand, 35299624 - 35299713
Alignment:
Q  449 ttatttgcagcttatagcacaaattctcatcatgataagcgcttttgcacaagcttacataagctatttttatagaaaaagataaaataa 538  Q
    ||||||||||| || |||||||   || ||||||||  || ||| |||| |||||||||||||||| ||| ||| |||||||||| ||||    
T  35299624 ttatttgcagcatagagcacaagcacttatcatgatcggcacttatgcaaaagcttacataagctactttcataaaaaaagataacataa 35299713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 527 - 564
Target Start/End: Original strand, 41819577 - 41819614
Alignment:
Q  527 aagataaaataaattttaattgtttttgtatatgctat 564  Q
    |||||||||||||||| ||||||||||||||| |||||    
T  41819577 aagataaaataaatttaaattgtttttgtataagctat 41819614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 541 - 597
Target Start/End: Original strand, 27298053 - 27298108
Alignment:
Q  541 tttaattgtttttgtatatgctataagttgcttttataagcaatatcggagatcttg 597  Q
    ||||||||||||| |||||||||||||||| |||||||||  |||| ||||| ||||    
T  27298053 tttaattgttttt-tatatgctataagttgtttttataagatatattggagaacttg 27298108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 507 - 539
Target Start/End: Original strand, 28776920 - 28776952
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaa 539  Q
    ||||||||||||||| |||||||||||||||||    
T  28776920 ataagctatttttattgaaaaagataaaataaa 28776952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 525 - 579
Target Start/End: Complemental strand, 29815191 - 29815140
Alignment:
Q  525 aaaagataaaataaattttaattgtttttgtatatgctataagttgcttttataa 579  Q
    |||||||||||||||    ||||||||||||||||||||||||||| || |||||    
T  29815191 aaaagataaaataaaa---aattgtttttgtatatgctataagttgtttctataa 29815140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 506 - 566
Target Start/End: Original strand, 32022015 - 32022075
Alignment:
Q  506 cataagctatttttatagaaaaagataaaataaattttaattgtttttgtatatgctataa 566  Q
    ||||||||| |||||||| |||||||||| |||| || | ||  |||||||||||||||||    
T  32022015 cataagctagttttatagcaaaagataaattaaagttaatttacttttgtatatgctataa 32022075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 36; Significance: 0.00000000006; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 507 - 558
Target Start/End: Complemental strand, 21403 - 21352
Alignment:
Q  507 ataagctatttttatagaaaaagataaaataaattttaattgtttttgtata 558  Q
    ||||||||||||||||| ||||||||||||||| || ||||||||| |||||    
T  21403 ataagctatttttataggaaaagataaaataaagttaaattgttttcgtata 21352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 508 - 558
Target Start/End: Original strand, 58883 - 58933
Alignment:
Q  508 taagctatttttatagaaaaagataaaataaattttaattgtttttgtata 558  Q
    |||||||||||||||| ||||| ||||||||| || ||||||||| |||||    
T  58883 taagctatttttataggaaaagttaaaataaagttaaattgttttcgtata 58933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University