View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8477_low_47 (Length: 250)

Name: NF8477_low_47
Description: NF8477
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8477_low_47
NF8477_low_47
[»] chr7 (29 HSPs)
chr7 (1-228)||(8867209-8867436)
chr7 (1-225)||(43183949-43184173)
chr7 (1-228)||(40919499-40919726)
chr7 (10-228)||(38637860-38638078)
chr7 (3-222)||(26625209-26625428)
chr7 (1-225)||(3113601-3113825)
chr7 (1-225)||(33686025-33686249)
chr7 (43-225)||(37001721-37001903)
chr7 (1-225)||(5555926-5556150)
chr7 (1-225)||(36631280-36631503)
chr7 (1-225)||(8394589-8394812)
chr7 (1-213)||(14776597-14776810)
chr7 (1-225)||(36658641-36658854)
chr7 (1-209)||(11020529-11020734)
chr7 (1-152)||(34388634-34388785)
chr7 (1-162)||(7003187-7003348)
chr7 (1-162)||(7049058-7049219)
chr7 (1-225)||(49010196-49010421)
chr7 (1-170)||(13072396-13072565)
chr7 (1-176)||(20606087-20606262)
chr7 (63-181)||(12224508-12224626)
chr7 (1-169)||(20609380-20609548)
chr7 (1-129)||(20611869-20611997)
chr7 (133-210)||(8722841-8722918)
chr7 (55-180)||(25709090-25709215)
chr7 (98-180)||(44832438-44832520)
chr7 (5-129)||(23581476-23581600)
chr7 (3-169)||(32199151-32199316)
chr7 (104-181)||(24308529-24308606)
[»] chr2 (29 HSPs)
chr2 (1-225)||(45419045-45419269)
chr2 (1-225)||(12756318-12756542)
chr2 (1-225)||(31581100-31581324)
chr2 (1-225)||(32126668-32126892)
chr2 (2-225)||(35963155-35963378)
chr2 (1-225)||(7072015-7072239)
chr2 (1-225)||(17444519-17444744)
chr2 (2-225)||(26162183-26162406)
chr2 (1-225)||(41251112-41251337)
chr2 (1-225)||(6403282-6403507)
chr2 (1-225)||(2286252-2286475)
chr2 (1-225)||(42442448-42442672)
chr2 (1-222)||(18982053-18982275)
chr2 (1-188)||(2957662-2957849)
chr2 (1-225)||(4554674-4554897)
chr2 (1-225)||(8058824-8059037)
chr2 (27-225)||(45121697-45121895)
chr2 (3-130)||(26238405-26238532)
chr2 (1-122)||(44084185-44084306)
chr2 (1-199)||(18829319-18829517)
chr2 (1-170)||(37621597-37621766)
chr2 (1-225)||(26591505-26591728)
chr2 (1-101)||(21556558-21556658)
chr2 (2-170)||(816593-816761)
chr2 (1-109)||(15441781-15441889)
chr2 (84-170)||(30325740-30325826)
chr2 (2-111)||(25391443-25391552)
chr2 (14-128)||(17373415-17373530)
chr2 (158-228)||(1579410-1579480)
[»] chr5 (34 HSPs)
chr5 (1-225)||(31680829-31681053)
chr5 (1-225)||(33430783-33431007)
chr5 (1-228)||(12278334-12278561)
chr5 (1-228)||(17332097-17332324)
chr5 (1-225)||(37255067-37255291)
chr5 (1-223)||(31501201-31501423)
chr5 (1-225)||(13818441-13818665)
chr5 (1-223)||(16333382-16333604)
chr5 (1-225)||(26282796-26283021)
chr5 (1-225)||(36293099-36293324)
chr5 (1-225)||(1775856-1776079)
chr5 (1-225)||(15959426-15959650)
chr5 (2-225)||(39657007-39657233)
chr5 (1-225)||(39435160-39435385)
chr5 (11-225)||(36291843-36292055)
chr5 (11-214)||(43069329-43069530)
chr5 (1-225)||(16155461-16155684)
chr5 (1-129)||(10034366-10034494)
chr5 (1-195)||(38268931-38269114)
chr5 (1-149)||(192369-192517)
chr5 (1-170)||(23034437-23034606)
chr5 (54-130)||(28801716-28801792)
chr5 (1-170)||(31271869-31272038)
chr5 (125-225)||(10036495-10036595)
chr5 (1-169)||(18266143-18266315)
chr5 (16-172)||(27750712-27750868)
chr5 (15-170)||(8788294-8788449)
chr5 (1-95)||(23034268-23034362)
chr5 (16-93)||(24792894-24792971)
chr5 (80-223)||(30297453-30297593)
chr5 (121-225)||(1050651-1050755)
chr5 (2-160)||(11779108-11779265)
chr5 (8-68)||(20368513-20368573)
chr5 (1-37)||(30297621-30297657)
[»] chr4 (49 HSPs)
chr4 (4-228)||(42333252-42333476)
chr4 (1-228)||(43143062-43143289)
chr4 (1-225)||(3292377-3292601)
chr4 (1-225)||(35546415-35546638)
chr4 (1-225)||(6689716-6689940)
chr4 (1-225)||(28876795-28877019)
chr4 (3-228)||(30216223-30216446)
chr4 (1-225)||(6235972-6236196)
chr4 (1-225)||(25931172-25931396)
chr4 (1-225)||(33135925-33136149)
chr4 (11-225)||(29995463-29995677)
chr4 (1-225)||(48989791-48990015)
chr4 (1-225)||(36381827-36382050)
chr4 (1-225)||(26438757-26438982)
chr4 (1-225)||(34406762-34406987)
chr4 (1-225)||(43356368-43356593)
chr4 (1-225)||(47501237-47501462)
chr4 (1-228)||(17510705-17510936)
chr4 (1-225)||(13012652-13012877)
chr4 (1-225)||(20129777-20130002)
chr4 (1-225)||(30110425-30110649)
chr4 (1-225)||(48130440-48130663)
chr4 (11-225)||(10352366-10352578)
chr4 (11-225)||(30077118-30077330)
chr4 (1-225)||(50204568-50204782)
chr4 (75-228)||(13390925-13391078)
chr4 (33-225)||(44157125-44157310)
chr4 (1-122)||(40529479-40529600)
chr4 (111-225)||(26449288-26449402)
chr4 (103-225)||(40529651-40529773)
chr4 (1-82)||(13394865-13394946)
chr4 (1-225)||(29134111-29134335)
chr4 (55-228)||(56225820-56225994)
chr4 (1-197)||(31853689-31853885)
chr4 (11-83)||(1818190-1818262)
chr4 (1-170)||(9415361-9415530)
chr4 (1-210)||(13502114-13502322)
chr4 (1-169)||(26546835-26547004)
chr4 (134-223)||(1818266-1818353)
chr4 (80-181)||(19168287-19168388)
chr4 (1-74)||(29094610-29094683)
chr4 (1-225)||(4038185-4038409)
chr4 (55-163)||(9070796-9070904)
chr4 (44-227)||(49062431-49062614)
chr4 (145-199)||(40529601-40529655)
chr4 (68-118)||(26448544-26448591)
chr4 (134-179)||(6724391-6724436)
chr4 (32-117)||(16877513-16877598)
chr4 (104-180)||(29899036-29899112)
[»] scaffold0041 (1 HSPs)
scaffold0041 (1-228)||(53369-53596)
[»] chr8 (31 HSPs)
chr8 (1-228)||(16787503-16787730)
chr8 (1-228)||(34136279-34136506)
chr8 (1-225)||(4404470-4404694)
chr8 (1-225)||(23402570-23402794)
chr8 (1-225)||(9877682-9877906)
chr8 (1-225)||(7278485-7278709)
chr8 (1-225)||(42231399-42231623)
chr8 (1-225)||(2728674-2728898)
chr8 (1-225)||(3648273-3648497)
chr8 (1-225)||(39914978-39915203)
chr8 (1-225)||(29727863-29728085)
chr8 (19-225)||(3435726-3435932)
chr8 (1-225)||(378886-379109)
chr8 (1-225)||(15838749-15838961)
chr8 (1-130)||(40470117-40470246)
chr8 (11-84)||(36409020-36409093)
chr8 (1-199)||(29351824-29352022)
chr8 (134-223)||(36409096-36409183)
chr8 (1-170)||(9175596-9175765)
chr8 (81-181)||(17479972-17480072)
chr8 (10-170)||(29892090-29892250)
chr8 (1-225)||(32539958-32540169)
chr8 (8-210)||(40401002-40401204)
chr8 (80-181)||(33639179-33639280)
chr8 (1-122)||(19049-19171)
chr8 (55-181)||(32964033-32964159)
chr8 (1-172)||(35852472-35852643)
chr8 (2-128)||(15541795-15541921)
chr8 (1-50)||(15863282-15863331)
chr8 (84-180)||(28296226-28296322)
chr8 (153-225)||(32750519-32750591)
[»] chr6 (13 HSPs)
chr6 (1-225)||(28997192-28997416)
chr6 (1-225)||(34948262-34948486)
chr6 (1-225)||(399081-399306)
chr6 (8-213)||(33228830-33229033)
chr6 (2-225)||(13838261-13838487)
chr6 (11-225)||(29743757-29743969)
chr6 (1-170)||(10231763-10231932)
chr6 (3-222)||(28931473-28931692)
chr6 (62-210)||(23217452-23217599)
chr6 (1-181)||(31373208-31373388)
chr6 (1-39)||(18339556-18339594)
chr6 (80-150)||(29341577-29341647)
chr6 (1-111)||(21556351-21556465)
[»] chr1 (21 HSPs)
chr1 (1-225)||(35907990-35908214)
chr1 (1-225)||(3829445-3829668)
chr1 (1-225)||(17445756-17445980)
chr1 (1-225)||(42310420-42310644)
chr1 (2-225)||(23313458-23313681)
chr1 (1-225)||(41971737-41971962)
chr1 (5-225)||(7433888-7434108)
chr1 (1-225)||(32981536-32981760)
chr1 (1-225)||(11957830-11958054)
chr1 (1-225)||(28463410-28463623)
chr1 (1-130)||(33490168-33490297)
chr1 (55-225)||(42412370-42412539)
chr1 (141-225)||(321159-321243)
chr1 (65-181)||(3604778-3604894)
chr1 (29-221)||(17457736-17457927)
chr1 (8-111)||(5715404-5715507)
chr1 (43-225)||(17744629-17744811)
chr1 (56-170)||(18716283-18716396)
chr1 (81-128)||(30094643-30094690)
chr1 (55-129)||(32944424-32944498)
chr1 (124-210)||(40194218-40194304)
[»] chr3 (28 HSPs)
chr3 (1-225)||(6930374-6930598)
chr3 (1-228)||(6503047-6503274)
chr3 (1-225)||(45183443-45183666)
chr3 (16-228)||(11017747-11017959)
chr3 (3-228)||(33041416-33041639)
chr3 (1-225)||(40081220-40081444)
chr3 (1-225)||(5135750-5135974)
chr3 (1-225)||(34083600-34083823)
chr3 (1-225)||(6268904-6269129)
chr3 (1-223)||(22967924-22968147)
chr3 (1-225)||(39772254-39772479)
chr3 (1-225)||(27935639-27935862)
chr3 (1-225)||(19390610-19390835)
chr3 (11-225)||(19564983-19565195)
chr3 (11-225)||(45336346-45336558)
chr3 (3-179)||(27912468-27912644)
chr3 (1-180)||(29564674-29564857)
chr3 (103-228)||(8257407-8257532)
chr3 (113-223)||(1185698-1185808)
chr3 (1-129)||(38282878-38282995)
chr3 (1-95)||(35937684-35937778)
chr3 (134-206)||(3159310-3159382)
chr3 (2-74)||(38415440-38415512)
chr3 (91-225)||(16094634-16094769)
chr3 (2-170)||(219144-219308)
chr3 (1-70)||(8257290-8257359)
chr3 (55-181)||(7468824-7468950)
chr3 (1-66)||(19814766-19814831)
[»] scaffold0069 (1 HSPs)
scaffold0069 (1-225)||(18022-18247)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-225)||(479935-480160)
[»] scaffold0495 (1 HSPs)
scaffold0495 (1-170)||(8483-8652)
[»] scaffold0134 (1 HSPs)
scaffold0134 (5-210)||(17774-17977)
[»] scaffold0015 (1 HSPs)
scaffold0015 (118-225)||(1937-2044)
[»] scaffold0166 (1 HSPs)
scaffold0166 (16-93)||(35277-35354)


Alignment Details
Target: chr7 (Bit Score: 208; Significance: 1e-114; HSPs: 29)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 8867436 - 8867209
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8867436 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 8867337  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  8867336 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaattttaacgacttcgaaatgct 8867237  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  8867236 atgaaactttacatatcctttttatata 8867209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 43184173 - 43183949
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43184173 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 43184074  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  43184073 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 43183974  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  43183973 atgaaactttacatatcctttttat 43183949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 40919726 - 40919499
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40919726 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaa 40919627  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  40919626 ctaaatttgacttgtgagtatacacttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 40919527  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  40919526 atgaaactttacatatcctttttatata 40919499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 10 - 228
Target Start/End: Complemental strand, 38638078 - 38637860
Alignment:
Q  10 tttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttg 109  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638078 tttataattaatttgtatctcgtttaaagactacaaaaattcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttg 38637979  T
Q  110 acttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactt 209  Q
    ||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  38637978 acttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaactt 38637879  T
Q  210 tacatatcctttttatata 228  Q
    |||||||||||||||||||    
T  38637878 tacatatcctttttatata 38637860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 26625209 - 26625428
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26625209 taaacaatttataattaatttgtatctcatttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 26625308  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    |||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||| ||    
T  26625309 aaatttaacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacaacttcgaaatgctat 26625408  T
Q  203 gaaactttacatatcctttt 222  Q
    ||||||||||||||||||||    
T  26625409 gaaactttacatatcctttt 26625428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3113825 - 3113601
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  3113825 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaa 3113726  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| ||||     
T  3113725 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgct 3113626  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  3113625 atgaaactttacagatcctttttat 3113601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33686025 - 33686249
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||| ||||||||||||||||||||||||||||||| |||||||    
T  33686025 cttaaacaatttataattaatttgtatctcgtttaaaaactacaaaattttattgtgaagattcttatcatgttctagtcatgcctacaaaagtagggaa 33686124  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  |||||||||| ||||||||  |||||||||||||||||| ||||||||||||||||||| ||||||     
T  33686125 ctaaatttgacttgtgagtatacgcttacgcggaacaaaattttaattttgcatgttttggttgaaaaatcaaaataaatttaaacgacttcaaaatgct 33686224  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  33686225 atgaaactttacatatcctttttat 33686249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 43 - 225
Target Start/End: Complemental strand, 37001903 - 37001721
Alignment:
Q  43 caaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatt 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  37001903 caaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatt 37001804  T
Q  143 tcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
    |||||||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  37001803 tcaattttgcacattttggttgaaaaatcataataaatttaaacgacttcgaaatgctatgaaactttacatatcctttttat 37001721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 5555926 - 5556150
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  5555926 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaa 5556025  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||| || |||      
T  5556026 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgactttgatatgtt 5556125  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  5556126 atgaaactttacagatcctttttat 5556150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36631280 - 36631503
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||| |||||||| ||||||| | |||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  36631280 cttaaacaattgataattaaattgtatctcgtttaaaaattacaaaatttcattgtgaaagttcttatcatgttctagtcatgcctacaaaattagagaa 36631379  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||     
T  36631380 ctaaatttg-cttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 36631478  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  36631479 atgaaactttacagatcctttttat 36631503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 8394589 - 8394812
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| |||||  |||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  8394589 cttaaacaatttataattaatttatatctcatttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 8394688  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||  |||||||||||||||||||||  |||||||||||||||| || |||||  |||||||||||| ||||||||||||||||||||||||||     
T  8394689 ctaaattt-tcttgtgagtatacgcttacgcggaacaaaatttcaatttggcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 8394787  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  8394788 atgaaactttacagatcctttttat 8394812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 14776810 - 14776597
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| |||||||| |||||||||||||||||||||||||||    
T  14776810 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatattctagtcatgcctacaaaattaggga 14776711  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||| | |||||||||||||||||| |||||||    
T  14776710 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaattaaaataaatttaaacgactttgaaatgc 14776611  T
Q  200 catgaaactttaca 213  Q
     |||||||||||||    
T  14776610 tatgaaactttaca 14776597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 36658641 - 36658854
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||| | ||||||||||||           |||| |||||||| ||||||||||    
T  36658641 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaattttattgtgaaggttct-----------agtcttgcctacagaattagggaa 36658729  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     ||||||| ||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  36658730 ttaaatttcacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgct 36658829  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||| ||||||||    
T  36658830 atgaaactttacatatactttttat 36658854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 209
Target Start/End: Complemental strand, 11020734 - 11020529
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||  ||||||||||||||||||  ||||||||||||||||| |||||||||    
T  11020734 cttaaacaatttataattaatttgtatctcgtttaaaaactccaaaatttcgttgtgaaggttcttatcattgtctagtcatgcctacaagattagggaa 11020635  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||| ||| |||||||||||||  |||||||||||||||||||  |||||||||||||||||   | |||||||||||||||||||||||     
T  11020634 ctaaatttgacttatgattatacgcttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatc---aaaaatttaaacgacttcgaaatgct 11020538  T
Q  201 atgaaactt 209  Q
    |||||||||    
T  11020537 atgaaactt 11020529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 34388785 - 34388634
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  34388785 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttccagtcatgcctacaaaattagggaa 34388686  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgc 152  Q
    ||||||||||||||||| |||| ||||||||  |||||||||||||||||||    
T  34388685 ctaaatttgacttgtgaatatatgcttacgcggaacaaaatttcaattttgc 34388634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7003187 - 7003348
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7003187 cttaaacaatttataattaatttgtatatcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 7003286  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggt 162  Q
    ||||| ||||||||| ||||||||||||| |  ||||||||||||||||||| |||||||||    
T  7003287 ctaaacttgacttgttagtatacgcttacacggaacaaaatttcaattttgcacgttttggt 7003348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 7049058 - 7049219
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7049058 cttaaacaatttataattaatttgtatatcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 7049157  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggt 162  Q
    ||||| ||||||||| ||||||||||||| |  ||||||||||||||||||| |||||||||    
T  7049158 ctaaacttgacttgttagtatacgcttacacggaacaaaatttcaattttgcacgttttggt 7049219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 49010196 - 49010421
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||| ||| ||||||| | | ||||| |||| ||||||| ||||||| ||||||||  ||||| || ||||||||||||    
T  49010196 cttaaacaatttataattaatttgtctctcgtttaaaaattgcaaaacttcattgtgaagattcttattatgttctaaccatgcttataaaattagggaa 49010295  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaa-ttttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    | ||||||||| ||||||||||||||||     ||||||||||||| |||||| |||||| ||| |||||| | |||||||  || || | | |||||||    
T  49010296 cgaaatttgacctgtgagtatacgcttattaggaacaaaatttcaatttttgcacgtttttgtttaaaaataaaaataaatagaatcgtcattgaaatgc 49010395  T
Q  200 catgaaactttacatatcctttttat 225  Q
     || ||||||| || ||| |||||||    
T  49010396 tataaaactttgcaaatcgtttttat 49010421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 13072565 - 13072396
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||| |||||| |||||||  || ||||||||||  |||||||||||||| || |||||  ||| ||| ||||||||| |||    
T  13072565 cttaaacaattcataattaattagtatctcgtttaaaatctccaaaatttcatggtgaaggttcttatgatattctaaacatacctccaaaattagagaa 13072466  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    | |||||||||  |||||||||||||||| |  |||||||||  ||||||||  ||||||||||||||||    
T  13072465 caaaatttgacccgtgagtatacgcttactctgaacaaaattataattttgcatgttttggttgaaaaat 13072396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 20606087 - 20606262
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||||||||||  |||||| ||| ||||||||||  |||||||||||||||||||||||  |||||||||| |||||   ||    
T  20606087 cttaaacaattcataattaatttgtatctcatttaaaaacttcaaaatttcatggtgaaggttcttatcatgttctaaccatgcctacagaattatataa 20606186  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataat 176  Q
    | ||||||||   || |||||| |||||| |  ||||||||| |||||| || |||||| |||||||||| |||||    
T  20606187 cgaaatttgatccgtcagtatatgcttactcggaacaaaattgcaatttcgcacgtttttgttgaaaaataataat 20606262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 63 - 181
Target Start/End: Complemental strand, 12224626 - 12224508
Alignment:
Q  63 tcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggt 162  Q
    |||||| |||||||| ||||||||| ||||||||||| | | ||||||| |||||||||| | |||| |||||||||||| ||||||||| |||||||||    
T  12224626 tcttatgatgttctaatcatgcctataaaattagggagcgacatttgacatgtgagtatatgattactcataacaaaattgcaattttgcacgttttggt 12224527  T
Q  163 tgaaaaatcataataaatt 181  Q
    |||||||||| ||| ||||    
T  12224526 tgaaaaatcaaaatcaatt 12224508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 20609380 - 20609548
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||| ||| |||||||||||||||||  ||||||  || ||||||| ||  ||||||||||||||| |||||||  |||||||||| |||||   ||    
T  20609380 cttaaactattcataattaatttgtatctcatttaaaatcttcaaaattgcatggtgaaggttcttatcttgttctaaccatgcctacagaattatataa 20609479  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaa 169  Q
    |  ||||||||  |||||||||||||||  |  || |||||| | ||||||| |||||| ||| |||||    
T  20609480 cggaatttgacccgtgagtatacgcttattcggaaaaaaattgctattttgcacgtttttgttaaaaaa 20609548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 20611869 - 20611997
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||| ||| |||||||||||||||||  ||||||  || ||||||| ||  |||||||||||||||||||||||   ||||||||| |||||   ||    
T  20611869 cttaaactattcataattaatttgtatctcatttaaaatcttcaaaattgcatggtgaaggttcttatcatgttctaactatgcctacagaattatataa 20611968  T
Q  101 ctaaatttgacttgtgagtatacgcttac 129  Q
    |  ||||||||  ||||||||||||||||    
T  20611969 cggaatttgacgcgtgagtatacgcttac 20611997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 8722918 - 8722841
Alignment:
Q  133 taacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    |||||||||||||||||||| || |||||||||||||| | |||||||| || ||  |||||||||| ||||||||||    
T  8722918 taacaaaatttcaattttgcacggtttggttgaaaaataaaaataaattgaatcgtattcgaaatgctatgaaacttt 8722841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 55 - 180
Target Start/End: Original strand, 25709090 - 25709215
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgc 154  Q
    ||||| |||||||| ||||||||  ||  ||||||||| |||||||| |||||||||   |||||||| | |||| ||| ||||||||  ||||||||      
T  25709090 gtgaaagttcttatgatgttctaaccaaacctacaaaaatagggaacaaaatttgacccatgagtatatggttactcatcacaaaattgtaattttgcat 25709189  T
Q  155 gttttggttgaaaaatcataataaat 180  Q
     ||||||||||||||||| |||||||    
T  25709190 attttggttgaaaaatcaaaataaat 25709215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 98 - 180
Target Start/End: Original strand, 44832438 - 44832520
Alignment:
Q  98 gaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaat 180  Q
    |||| ||||||||| |||||||||| |||||| |  ||||||||| |||||| || ||||||||||||||||| | |||||||    
T  44832438 gaaccaaatttgacatgtgagtataagcttactctaaacaaaattgcaatttcgcacgttttggttgaaaaataaaaataaat 44832520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 5 - 129
Target Start/End: Original strand, 23581476 - 23581600
Alignment:
Q  5 aacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaa 104  Q
    ||||||| |||||||||| |||||| ||||||  ||| ||||||||||  ||||| |||||||| ||||| ||   |||||||||||||||| || |  |    
T  23581476 aacaattcataattaattagtatctcgtttaacaactccaaaatttcatggtgaaagttcttataatgttttaacgatgcctacaaaattagagagcgca 23581575  T
Q  105 atttgacttgtgagtatacgcttac 129  Q
    | ||||| | |||||||||| ||||    
T  23581576 acttgacctatgagtatacgtttac 23581600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 32199151 - 32199316
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||||||||| |||||||||||| ||| ||||||| |||| |||||| ||| |||||| ||||||  ||||| ||  || ||||| | ||||| |||||     
T  32199151 taaacaatttttaattaatttgtctctcgtttaaaaactataaaattccacggtgaagattcttacgatgttataaccaagccta-ataattatggaaca 32199249  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaa 169  Q
    ||| ||||| |||||  ||| |||||  |  |||||||||  |||||||| |||||| ||| |||||    
T  32199250 aaacttgacatgtgacaatatgcttaatcggaacaaaattgtaattttgcacgttttagttaaaaaa 32199316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 104 - 181
Target Start/End: Complemental strand, 24308606 - 24308529
Alignment:
Q  104 aatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatt 181  Q
    ||||||||||||||||||| || |||  | ||||||||| ||||| ||  | ||||||||||||||| | ||||||||    
T  24308606 aatttgacttgtgagtatatgcgtactaagaacaaaattgcaattgtgtacattttggttgaaaaataaaaataaatt 24308529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 205; Significance: 1e-112; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45419045 - 45419269
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45419045 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 45419144  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  45419145 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 45419244  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  45419245 atgaaactttacatatcctttttat 45419269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 12756542 - 12756318
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12756542 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 12756443  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||| ||  ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||     
T  12756442 ctaaatttgacttgtgagtatacgcttatgcggaacaaaatttcaattttccacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 12756343  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||| ||||||||||||||||||    
T  12756342 atgaaattttacatatcctttttat 12756318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 31581324 - 31581100
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31581324 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 31581225  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| || ||||||||||||||||||||||      
T  31581224 ctaaatttgacttgtgagtatacgcttacgcgaaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaacaaatttaaacgacttcgaaatggt 31581125  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  31581124 atgaaactttacatatcctttttat 31581100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32126892 - 32126668
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||    
T  32126892 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcactttgaaggttattatcatgttctagtcatgcctacaaaattagggaa 32126793  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | |||||  |||||||||||| ||||||||||||||||||||||||||     
T  32126792 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaatttttcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 32126693  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  32126692 atgaaactttacagatcctttttat 32126668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 35963155 - 35963378
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||    
T  35963155 ttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaac 35963254  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcca 201  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| |||| |    
T  35963255 taaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgcta 35963354  T
Q  202 tgaaactttacatatcctttttat 225  Q
    |||||||||||| |||||||||||    
T  35963355 tgaaactttacagatcctttttat 35963378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 7072239 - 7072015
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||  |||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||    
T  7072239 cttaaacaatttataattaatttgtatctcgtttaataactacaaaatttcattgggaaggttcttatcatgttctagtcatgcctacaaaattagggaa 7072140  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||| ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||| ||| ||||||||||     
T  7072139 ctaaatttgacttgtgggtatacgcttacgctgaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaatcgatttcgaaatgct 7072040  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||||||  |||||||    
T  7072039 atgaaactttacatattatttttat 7072015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 162; E-Value: 1e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 17444744 - 17444519
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  17444744 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattaggga 17444645  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  17444644 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 17444545  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  17444544 tatgaaactttacaaatcccttttat 17444519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 160; E-Value: 2e-85
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 26162406 - 26162183
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    ||||||||||||||| |||||||||||| ||||||| |||||||||||||| | ||||||| ||||||||||||||||||| ||||||||||||||||||    
T  26162406 ttaaacaatttataactaatttgtatctcgtttaaaaactacaaaatttcattctgaaggtccttatcatgttctagtcatacctacaaaattagggaac 26162307  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcca 201  Q
    |||||||||||||||| |||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |    
T  26162306 taaatttgacttgtgactatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgata 26162207  T
Q  202 tgaaactttacatatcctttttat 225  Q
    |||||||||||| ||| |||||||    
T  26162206 tgaaactttacagatcttttttat 26162183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 41251337 - 41251112
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  41251337 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 41251238  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  41251237 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 41251138  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  41251137 tatgaaactttacaaatcccttttat 41251112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6403507 - 6403282
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6403507 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 6403408  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  6403407 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 6403308  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  6403307 tatgaaactttacaaatcccttttat 6403282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 2286252 - 2286475
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||| |||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||    
T  2286252 cttaaacaatttataattaagttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattaggaaa 2286351  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||| ||||||||||||||||||| |  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||| ||||||     
T  2286352 ctaaatttg-cttgtgagtatacgcttacacggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcaaaatgct 2286450  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  2286451 atgaaactttacagatcctttttat 2286475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42442448 - 42442672
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||| ||||||| ||||| ||||||| | || ||||||||| |||||| ||||||||||||||||||||||||||||||||||| ||||    
T  42442448 cttaaacaatttatagttaatttatatctcgtttaaaaattataaaatttcattgtgaatgttcttatcatgttctagtcatgcctacaaaattatggaa 42442547  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||| ||||     
T  42442548 ctaaatttgacttgtgagtatacgcttacgcagaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgaattcgatatgct 42442647  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  42442648 atgaaactttacaaatcctttttat 42442672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 18982053 - 18982275
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| ||||| ||||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  18982053 cttaaacaatttataattaatttttatctcgtttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 18982152  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgc-gcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||  |||||||||||| ||||||||||||||||||||| ||||    
T  18982153 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcaacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgc 18982252  T
Q  200 catgaaactttacatatcctttt 222  Q
     ||||||||||||| ||| ||||    
T  18982253 tatgaaactttacagatcatttt 18982275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 188
Target Start/End: Complemental strand, 2957849 - 2957662
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||    
T  2957849 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgtaggttcttatcatgttctagtcatgcctacaaaattagggaa 2957750  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacga 188  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||  |||||||||||| |||||||||||||||    
T  2957749 ctaaatttgacttgtgagtatacccttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacga 2957662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4554897 - 4554674
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||| |||    
T  4554897 cttaaacaatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttcttatcatgttctagtcatgcctacaaaattagagaa 4554798  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     |||||||||||||| ||||||||||| ||   ||||||||||||||||||| | ||||||||| ||||| | |||||||||||||||| ||||||||      
T  4554797 ttaaatttgacttgttagtatacgcttgcgtggaacaaaatttcaattttgcactttttggttg-aaaataaaaataaatttaaacgacatcgaaatgtt 4554699  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| || ||||||||    
T  4554698 atgaaactttacagatactttttat 4554674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 8059037 - 8058824
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||||           |||||||||||||||||    
T  8059037 cttaaacaatttataattaatttgcatcttgtttaaagactacgaaatttcattgggaaggttcttatcatg-----------cctacaaaattagggaa 8058949  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  |||||||||| |||||||| ||||||||||||||||||| ||||| |||||||||||| |||  |      
T  8058948 ctaaatttgacttgtgagtatacgcttacgcggaacaaaattttaattttgcacgttttggttgaaaaatcaaaataattttaaacgactttgaacagat 8058849  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  8058848 atgaaactttacagatcctttttat 8058824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 27 - 225
Target Start/End: Original strand, 45121697 - 45121895
Alignment:
Q  27 tcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgct 126  Q
    ||||||||||| |||||||||||||| ||||||| ||||||||||||| ||||||| | |||||||||||||||||||||||||| ||||||||||||||    
T  45121697 tcttgtttaaaaactacaaaatttcattgtgaagtttcttatcatgttttagtcatacgtacaaaattagggaactaaatttgacatgtgagtatacgct 45121796  T
Q  127 tacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
    |||    ||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||| ||| ||| |||||||    
T  45121797 tacttggaacaaaatttcaatttttcacgttttggttgaaaaatcaaaataaatttaaacgacttcaaaatgctatgaaacttaacagatcatttttat 45121895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 3 - 130
Target Start/End: Original strand, 26238405 - 26238532
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||||||||||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  26238405 taaacaatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 26238504  T
Q  103 aaatttgacttgtgagtatacgcttacg 130  Q
    ||||||| ||||||||||||||||||||    
T  26238505 aaatttgccttgtgagtatacgcttacg 26238532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 44084306 - 44084185
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  44084306 cttaaataatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttattatcattttctagtcatgcctacaaaattagggaa 44084207  T
Q  101 ctaaatttgacttgtgagtata 122  Q
    ||||||||||||||||||||||    
T  44084206 ctaaatttgacttgtgagtata 44084185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 18829319 - 18829517
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||| |||| ||||||||| ||| | ||||||||| ||||| |||||||| ||||||||   |||||||||||||||| |||    
T  18829319 cttaaacaattcataattaattcgtatattgtttaaaaacttctaaatttcacggtgaatgttcttatgatgttctaactatgcctacaaaattagagaa 18829418  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |  ||||||||  |||||||||| ||||| |  ||||||||| |||||| || |||||| |||||||||| | |||||||  ||||| ||| |||||||    
T  18829419 cggaatttgacccgtgagtatacacttactcggaacaaaattgcaatttcgcacgttttcgttgaaaaattaaaataaatcgaaacgtctttgaaatgc 18829517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 37621766 - 37621597
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||| |||||||||| |||||| ||||||| ||| |||||||||| ||||||||||||||| ||||||||  ||||||||||||||||| |||    
T  37621766 cttaaataattcataattaattcgtatctcgtttaaaaacttcaaaatttcattgtgaaggttcttatgatgttctaaccatgcctacaaaattagagaa 37621667  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    |  | ||||| | ||||||||| |||||| |  ||||||||| ||||||  | | ||||| |||||||||    
T  37621666 cagactttgattcgtgagtatatgcttactcggaacaaaattgcaatttcacacattttgattgaaaaat 37621597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 26591505 - 26591728
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||||||||| ||||||| |||  ||||||||   |||||||||||||| ||| ||||  |||||||| |||||||| |||    
T  26591505 cttaaacaattcataattaatttgtatctcgtttaaaaactctaaaatttcttggtgaaggttcttat-atggtctaaccatgcctaaaaaattagagaa 26591603  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
       ||||||||   |||||||||| |||| |  | ||||||| |||||| || ||||||||||||||||| | |||||||| |||   ||| |||||||     
T  26591604 tggaatttgacccatgagtatacgtttactcggatcaaaattgcaatttcgcacgttttggttgaaaaataaaaataaattgaaatatctttgaaatgct 26591703  T
Q  201 atgaaactttacatatcctttttat 225  Q
    | |||||||| || |||||||||||    
T  26591704 acgaaactttgcagatcctttttat 26591728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 101
Target Start/End: Original strand, 21556558 - 21556658
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||||||||| ||||||| ||| ||||||||||  |||||||||||||| |||||| |  ||||||||||||||||| |||    
T  21556558 cttaaacaattcataattaatttgtatctcgtttaaaaactccaaaatttcatggtgaaggttcttatgatgttccaaccatgcctacaaaattagagaa 21556657  T
Q  101 c 101  Q
    |    
T  21556658 c 21556658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 816761 - 816593
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||| ||||||||||||| |||  |||||| ||| ||||||||||  ||||  |||||||| ||| ||    |||||||||||||||||| |||    
T  816761 ttaaacaattcataattaatttgtctctcctttaaaaactccaaaatttcaaagtgatagttcttataatgctcctaccatgcctacaaaattaggaaac 816662  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
     |||||||||  || ||||||||||||| |  || |||||| ||||||| |||| ||||||| ||||||    
T  816661 aaaatttgacccgtaagtatacgcttactcgaaataaaattgcaattttacgcgctttggttaaaaaat 816593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 109
Target Start/End: Complemental strand, 15441889 - 15441781
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||||| |||  |||||| | | ||||||||||  ||||  |||||| | | |||||||||||||||||||||||||  ||    
T  15441889 cttaaacaattcataattaatttgtgtctcatttaaaaaatccaaaatttcatggtgatagttcttgtgaagttctagtcatgcctacaaaattagaaaa 15441790  T
Q  101 ctaaatttg 109  Q
    | |||||||    
T  15441789 cgaaatttg 15441781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 84 - 170
Target Start/End: Complemental strand, 30325826 - 30325740
Alignment:
Q  84 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    |||||||||||||||||| |||||||||   |||||||| |||||| |  ||||||||| ||||||| | || ||||||||||||||    
T  30325826 cctacaaaattagggaacaaaatttgacccatgagtatatgcttactcgcaacaaaattacaattttacacgctttggttgaaaaat 30325740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 111
Target Start/End: Original strand, 25391443 - 25391552
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||| |||||||| || | |||  |||||| ||| |||||||| |  ||||| || ||||| ||||||||  ||||||||||||||||| |||     
T  25391443 ttaaacaattcataattaacttatttctcctttaaaaactccaaaattttatggtgaaagtacttatgatgttctaaccatgcctacaaaattagtgaat 25391542  T
Q  102 taaatttgac 111  Q
     |||||||||    
T  25391543 gaaatttgac 25391552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 128
Target Start/End: Complemental strand, 17373530 - 17373415
Alignment:
Q  14 taattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttct-agtcatgcctacaaaattagggaactaaatttgact 112  Q
    ||||||||| |||||   |||| | ||| ||||||||||  ||||| |||||||| ||||| | |  ||||||||||||||||| |||  |||||||||     
T  17373530 taattaattcgtatcacatttagaaactccaaaatttcatggtgaatgttcttatgatgtttttaaccatgcctacaaaattagagaatgaaatttgacc 17373431  T
Q  113 tgtgagtatacgctta 128  Q
     |||||||||||||||    
T  17373430 cgtgagtatacgctta 17373415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 228
Target Start/End: Complemental strand, 1579480 - 1579410
Alignment:
Q  158 ttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttatata 228  Q
    ||||||||||||||| |||||||| || || || || ||||| |||||| |||||| || |||||||||||    
T  1579480 ttggttgaaaaatcaaaataaattgaagcgtctccggaatgctatgaaaatttacaaattctttttatata 1579410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 201; Significance: 1e-110; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 31680829 - 31681053
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  31680829 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 31680928  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  31680929 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 31681028  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  31681029 atgaaactttacatatcctttttat 31681053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 33430783 - 33431007
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  33430783 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 33430882  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  33430883 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 33430982  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  33430983 atgaaactttacatatcctttttat 33431007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 12278561 - 12278334
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12278561 cttaaacaatttataattaatttgtatctcgtttaaagattacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 12278462  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||||||||||| |||||||||  |||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||| ||| ||     
T  12278461 ctaaatttgacttgtgagtattcgcttacgcggaacaaaattttaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcaaaacgct 12278362  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  12278361 atgaaactttacatatcctttttatata 12278334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 17332324 - 17332097
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  17332324 cttaagcaatttataattaatttgtatcttgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattaaggaa 17332225  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||| ||||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||     
T  17332224 ctaaatttgacttgcgagtatatgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcaaaatgct 17332125  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  17332124 atgaaactttacatatcctttttatata 17332097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 37255067 - 37255291
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||    
T  37255067 cttaaataatttataattaatttgtatctcgtttaaagactacaaaatttcactcggaaggttcttatcatgttctagtcatgcctacaaaattagggaa 37255166  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||     
T  37255167 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgatttcgaaatgct 37255266  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||| ||||||||||||||||||    
T  37255267 atgaaagtttacatatcctttttat 37255291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31501423 - 31501201
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  31501423 cttaaacaatttataattaatttgtatcttgtttaaagactacataatttcattgtgatggttcttatcatgttctagtcatgcctacaaaattagggaa 31501324  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| ||||||||||||     
T  31501323 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacaacttcgaaatgct 31501224  T
Q  201 atgaaactttacatatccttttt 223  Q
    ||||||||||||| |||||||||    
T  31501223 atgaaactttacagatccttttt 31501201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13818441 - 13818665
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||| |||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  13818441 cttaaacagtttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 13818540  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||| |||||   ||||||||||| ||||||||||||||||||||||||||     
T  13818541 ctaaatttgacttgtgagtatacgcttacgcggaacaaaacttcaattttgcacgtttcaattgaaaaatcaaaataaatttaaacgacttcgaaatgct 13818640  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  13818641 atgaaactttacagatcctttttat 13818665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16333604 - 16333382
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||||||||||| | |||||||||||| || ||||||||||||||| || ||||||||| |||||||||||||||    
T  16333604 cttaaaaaatttataattaatttgtatcttgtttaaaaattacaaaatttcattgggaaggttcttatcatattttagtcatgcttacaaaattagggaa 16333505  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| ||||     
T  16333504 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgct 16333405  T
Q  201 atgaaactttacatatccttttt 223  Q
    ||||||||||||| |||||||||    
T  16333404 atgaaactttacagatccttttt 16333382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26283021 - 26282796
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  26283021 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 26282922  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  26282921 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 26282822  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  26282821 tatgaaactttacaaatcccttttat 26282796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36293324 - 36293099
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    |||||| |||||||||||||||||||||| |||||||   |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |    
T  36293324 cttaaataatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattaggaa 36293225  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  36293224 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 36293125  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  36293124 tatgaaactttacaaatcccttttat 36293099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 1776079 - 1775856
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||| ||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||| |||||||| |||    
T  1776079 cttaaacaatttataattaatctgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctaaaaaattagagaa 1775980  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     |||||||| |||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||     
T  1775979 ttaaatttg-cttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttgagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 1775881  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  1775880 atgaaactttacagatcctttttat 1775856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 15959650 - 15959426
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||| |||||||||||||||||| | || ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||    
T  15959650 cttaatcaatttataattaatttgcagctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaatttgggaa 15959551  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||| |||||||||||||||| ||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||| |||||||     
T  15959550 ctaaatttgacctgtgagtatacgcttatgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacaactttgaaatgct 15959451  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||| | |||||||||||    
T  15959450 atgaaactttaaagatcctttttat 15959426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 2 - 225
Target Start/End: Complemental strand, 39657233 - 39657007
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39657233 ttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 39657134  T
Q  102 taaatttg---acttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatg 198  Q
    ||||||||   |||||||||||||| |||||||  ||||||||||||||||||| |||||  ||| |||||||| |||||||||||||||||||||||||    
T  39657133 taaatttgatcacttgtgagtatacacttacgcggaacaaaatttcaattttgcacgtttcagttaaaaaatcaaaataaatttaaacgacttcgaaatg 39657034  T
Q  199 ccatgaaactttacatatcctttttat 225  Q
    | ||||||||||| | |||||||||||    
T  39657033 ctatgaaactttatagatcctttttat 39657007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 39435160 - 39435385
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||||||| ||||||||||||||||||| ||||||||||||||||    
T  39435160 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatacctacaaaattaggga 39435259  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||| ||||| ||||||||  |||||||||||||||||||  ||||  |||||||||||| ||||||||||||||||||||||||||    
T  39435260 actaaatttgacttgtgggtataagcttacgcggaacaaaatttcaattttgcatgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 39435359  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  39435360 tatgaaactttacaaatcccttttat 39435385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 36291843 - 36292055
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| |||| ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36291843 ttataattaatttgtatctcgtttaaaaactataaaattttattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 36291942  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||| ||||||||| |||||||  |||||||||||||||||||  |||||||||||||||||| ||||||  ||||| |||||||||||| ||||||||||    
T  36291943 cttatgagtatacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacaacttcgaaatgctatgaaacttt 36292040  T
Q  211 acatatcctttttat 225  Q
    ||| || ||||||||    
T  36292041 acagattctttttat 36292055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 11 - 214
Target Start/End: Original strand, 43069329 - 43069530
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| |||||||||||||| | |||||||||||||||||||||||||||| || |||||||||||||||||||||||    
T  43069329 ttataattaatttgtatctcgtttaaaaactacaaaatttcattttgaaggttcttatcatgttctagtcatgtctgcaaaattagggaactaaatttga 43069428  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| |||||||  |||||||||||||||||||  ||||||||||||||| || ||||||  |||||||||| ||||||| ||||||||||    
T  43069429 cttgtgagtatacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaaacaaaataaa--taaacgactttgaaatgctatgaaacttt 43069526  T
Q  211 acat 214  Q
    ||||    
T  43069527 acat 43069530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 16155461 - 16155684
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||| ||||||||||||||||||| ||  ||||||| | || ||||| | | |||||||||||||||||||||||||||||||||||||||||||||||    
T  16155461 cttaaccaatttataattaatttgtctc--gtttaaaaattataaaatattattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 16155558  T
Q  101 ctaaatttgacttgtgagtatacgcttacgc-ataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |||||||||||||||||||||||||| || |   || |||| ||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  16155559 ctaaatttgacttgtgagtatacgctcacacggaaaaaaaaattcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 16155658  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| ||| |||||||    
T  16155659 tatgaaactttacagatcgtttttat 16155684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 10034366 - 10034494
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10034366 cttaaacaatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 10034465  T
Q  101 ctaaatttgacttgtgagtatacgcttac 129  Q
    |||||||||||||||||||||||||||||    
T  10034466 ctaaatttgacttgtgagtatacgcttac 10034494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 1 - 195
Target Start/End: Complemental strand, 38269114 - 38268931
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| || |||| |||||||||||||| |||||||||||||||||||           |||||||||||||||||    
T  38269114 cttaaacaatttataattaatttgtatctcgtataaaaactacaaaatttcattgtgaaggttcttatcatg-----------cctacaaaattagggaa 38269026  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaa 195  Q
    ||||||||||| ||| ||||||||||||| |  ||||||||||||||||||| ||||||||||||||||||| ||||||||  ||||||||||||    
T  38269025 ctaaatttgacctgtaagtatacgcttactcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaattggaacgacttcgaa 38268931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 1 - 149
Target Start/End: Original strand, 192369 - 192517
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||| ||| ||||||||||||||||||| |||||||||| ||||||||||||    
T  192369 cttaaacaatttataattaatttgtatctcatttaaaaactacaaaatttcattgttaaggttcttatcatgttctcgtcatgcctataaaattagggaa 192468  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattt 149  Q
    ||||||||||| | |||||||||| |||| |  ||||||||||||||||    
T  192469 ctaaatttgacctatgagtatacgtttactcggaacaaaatttcaattt 192517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 23034437 - 23034606
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||| ||| |||| || |||| ||||||| | |||||| |||||||| ||||| || ||||||||||||||||| ||||    
T  23034437 cttaaacaatttataattaatttgtctctcgttttaaaactataaaatttaattgtgaaagttcttattatgttataatcatgcctacaaaattaaggaa 23034536  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
      ||||||||| |||||||||||||||||    |||||||||| ||||||||  ||| || |||||||||    
T  23034537 tgaaatttgacctgtgagtatacgcttactaggaacaaaattttaattttgcatgttctgattgaaaaat 23034606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 54 - 130
Target Start/End: Original strand, 28801716 - 28801792
Alignment:
Q  54 tgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacg 130  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28801716 tgtgaaggttcttatcatgttctagtcatgcttacaaaattagggaactaaatttgacttgtgagtatacgcttacg 28801792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31271869 - 31272038
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||| ||||||||||||||||| ||| |||| || |||  |||| || | | ||||||||||||| ||||||||| |||| |||| ||||||| |||    
T  31271869 cttaaaccatttataattaatttgtctctcgtttcaaaactgaaaaactttattctgaaggttcttattatgttctagccatggctaccaaattagtgaa 31271968  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    | || |||||||||||||||||| ||| |    ||||||||||||||||| | | |||||||||||||||    
T  31271969 caaattttgacttgtgagtatacacttgctaggaacaaaatttcaattttacacattttggttgaaaaat 31272038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 125 - 225
Target Start/End: Original strand, 10036495 - 10036595
Alignment:
Q  125 cttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatccttttta 224  Q
    |||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| |||| ||||||||||||| ||| ||||||    
T  10036495 cttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatgaaactttacagatcattttta 10036594  T
Q  225 t 225  Q
    |    
T  10036595 t 10036595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18266315 - 18266143
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtc----atgcctacaaaattag 96  Q
    ||||||||||| ||||||| ||||| |||  |||||| ||| ||||||| ||  |||||||||||||| || ||||| ||    |||||||||||||| |    
T  18266315 cttaaacaattcataattagtttgtctctcatttaaaaacttcaaaattccatggtgaaggttcttatgatattctaatcgaccatgcctacaaaatttg 18266216  T
Q  97 ggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaa 169  Q
    |||   ||||||||| ||||| |||| |||||| || | ||||||| ||||||||| |||||||||| |||||    
T  18266215 ggagtgaaatttgacctgtgactatatgcttactcagagcaaaattgcaattttgcacgttttggttaaaaaa 18266143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 16 - 172
Target Start/End: Original strand, 27750712 - 27750868
Alignment:
Q  16 attaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgt 115  Q
    ||||||||||  || ||||||| |||||||||||||   ||||| ||| |||| ||||||||  |||| ||||| |||||||||| ||||||||||   |    
T  27750712 attaatttgtcgctcgtttaaaaactacaaaatttcttggtgaatgtttttatgatgttctaaccatggctacacaattagggaattaaatttgacccat 27750811  T
Q  116 gagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatca 172  Q
    ||||||| |||||| |  || |||||| ||||||||   |||||| |||||||||||    
T  27750812 gagtatatgcttactcggaagaaaattgcaattttgtatgttttgattgaaaaatca 27750868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 170
Target Start/End: Original strand, 8788294 - 8788449
Alignment:
Q  15 aattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttg 114  Q
    |||||||  |||||||||||||  |||  ||||||| |  |||||| ||||||| ||||||||  ||||||||||||||| | |||   ||||||||||     
T  8788294 aattaatccgtatcttgtttaagaactcgaaaatttaatggtgaagtttcttatgatgttctaaccatgcctacaaaattggagaatggaatttgactta 8788393  T
Q  115 tgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    |||| |||||||||| |  ||||||||| | ||||||| | |||||||| ||||||    
T  8788394 tgagaatacgcttactcgaaacaaaattgccattttgcacattttggtttaaaaat 8788449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 23034268 - 23034362
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaatta 95  Q
    ||||||||||||||||||||||||| |||| |||||| |||| ||||||| | | ||||||||||||| || ||  |  ||||||||||||||||    
T  23034268 cttaaacaatttataattaatttgtctcttatttaaaaactataaaatttaattttgaaggttcttattatattacaaccatgcctacaaaatta 23034362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 24792894 - 24792971
Alignment:
Q  16 attaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaat 93  Q
    ||||||||| |||| ||||||| ||| ||||||||||  |||||||||||||| ||||||||  |||||||| |||||    
T  24792894 attaatttgcatctcgtttaaaaactccaaaatttcatggtgaaggttcttataatgttctaaccatgcctataaaat 24792971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 223
Target Start/End: Complemental strand, 30297593 - 30297453
Alignment:
Q  80 catgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaa 179  Q
    |||||||||||||||||||||  ||||||||| |||||||   ||||||     ||||||||||||||||||| |||||| |||| ||||  | ||||||    
T  30297593 catgcctacaaaattagggaataaaatttgacatgtgagt---cgcttaatagaaacaaaatttcaattttgcacgttttagttggaaaacaaaaataaa 30297497  T
Q  180 tttaaacgacttcgaaatgccatgaaactttacatatccttttt 223  Q
    || ||||  |||| ||| || ||||||||||  | |||||||||    
T  30297496 ttgaaacttcttctaaacgctatgaaactttgtagatccttttt 30297453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 121 - 225
Target Start/End: Original strand, 1050651 - 1050755
Alignment:
Q  121 tacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctt 220  Q
    ||||||||| |  ||||||||| |||||||||  |||||||||||||| | | | |||||||||||  |||| |||||  |||||||||| || ||||||    
T  1050651 tacgcttactccgaacaaaattgcaattttgcatgttttggttgaaaactaaaattaaatttaaacttcttcaaaatgttatgaaactttgcaaatcctt 1050750  T
Q  221 tttat 225  Q
    |||||    
T  1050751 tttat 1050755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 160
Target Start/End: Complemental strand, 11779265 - 11779108
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||| |||||||||||||  || ||||||| ||| ||||| || |   |||||| | |||| ||||| ||  |||||||| |||||| | ||||    
T  11779265 ttaaacaattcataattaatttgtcgctcgtttaaaaactccaaaagtttatgatgaaggcttttatgatgttttaaccatgcctataaaattggcgaac 11779166  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttg 160  Q
     ||||| ||  | |||||||| | |||| |||||||||||| |||||||| ||| ||||    
T  11779165 gaaatt-gatctatgagtatatgattactcataacaaaattgcaattttgtgcgatttg 11779108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 68
Target Start/End: Original strand, 20368513 - 20368573
Alignment:
Q  8 aatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttat 68  Q
    |||| ||||| ||||||| | | ||||||| ||| |||||||||| |||||||||||||||    
T  20368513 aattcataataaatttgtttatcgtttaaaaactccaaaatttcattgtgaaggttcttat 20368573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 30297657 - 30297621
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaa 37  Q
    ||||||||||||||||||||||||| ||| |||||||    
T  30297657 cttaaacaatttataattaatttgtctctcgtttaaa 30297621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 201; Significance: 1e-110; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 201; E-Value: 1e-110
Query Start/End: Original strand, 4 - 228
Target Start/End: Complemental strand, 42333476 - 42333252
Alignment:
Q  4 aaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaacta 103  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  42333476 aaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaacta 42333377  T
Q  104 aatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatg 203  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||    
T  42333376 aatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgctatg 42333277  T
Q  204 aaactttacatatcctttttatata 228  Q
    |||||||||||||||||||||||||    
T  42333276 aaactttacatatcctttttatata 42333252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 43143289 - 43143062
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43143289 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaa 43143190  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||     
T  43143189 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaattttaacgacttcgaaatgct 43143090  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  43143089 atgaaactttacatatcctttttatata 43143062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3292601 - 3292377
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3292601 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaa 3292502  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||     
T  3292501 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttccacgttttggttgaaaaatcataataaatttaatcgacttcgaaatgct 3292402  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  3292401 atgaaactttacatatcctttttat 3292377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35546415 - 35546638
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  35546415 cttaaataatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttttagtcatgcctacaaa-ttagggaa 35546513  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  35546514 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 35546613  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  35546614 atgaaactttacatatcctttttat 35546638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6689940 - 6689716
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  6689940 cttaaacaatttataattaatttgaatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaa 6689841  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     ||||||||||||||||||||||||||||||  ||||||||||||||||| | ||||||||||||||||||||||||||||||| ||||||||||||||     
T  6689840 ttaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttccacgttttggttgaaaaatcataataaatttaatcgacttcgaaatgct 6689741  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  6689740 atgaaactttacatatcctttttat 6689716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 28877019 - 28876795
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  28877019 cttaaacaatttataattaatttctatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 28876920  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||     
T  28876919 ctaaatttgacttgtgagtataagcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgactttgaaatgct 28876820  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  28876819 atgaaactttacagatcctttttat 28876795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 179; E-Value: 1e-96
Query Start/End: Original strand, 3 - 228
Target Start/End: Complemental strand, 30216446 - 30216223
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||||||||||||||||| ||||||||  ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  30216446 taaacaatttataattaacttgtatctcatttaaagactacaaaatttcactg--aaggttcttatcatgttctagtcatgcctacaaaattagggaact 30216349  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||  ||    
T  30216348 aaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacaacttcgaaatgttat 30216249  T
Q  203 gaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||    
T  30216248 gaaactttacatatcctttttatata 30216223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 6235972 - 6236196
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  6235972 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 6236071  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||| ||||||||||||     
T  6236072 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaaccacttcgaaatgct 6236171  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  6236172 atgaaactttacagatcctttttat 6236196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 25931172 - 25931396
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||    
T  25931172 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttaactgtgaaggttcttatcatgttttagtcatgcctacaaaattagggaa 25931271  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||     
T  25931272 ctaaatttgacttgtgagaatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 25931371  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  25931372 atgaaactttacagatcctttttat 25931396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 33136149 - 33135925
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  33136149 cttaaacaatttataattaatttgtatcttgtttaaaaactacgaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 33136050  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||||||||||| ||||||||||||||||||| ||||| |||||||||||| ||||||      
T  33136049 ctaaatttgacttatgagtatacgtttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataattttaaacgactttgaaatgat 33135950  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  33135949 atgaaactttacagatcctttttat 33135925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 29995677 - 29995463
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29995677 ttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 29995578  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||  |||||| |||    
T  29995577 cttgtgagtatacacttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatggtatgaaaattt 29995478  T
Q  211 acatatcctttttat 225  Q
    |||||| ||||||||    
T  29995477 acatattctttttat 29995463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48989791 - 48990015
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||| |||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48989791 cttaaacaatttatgattaatttgtatctcgtttaaaaactaaaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 48989890  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     ||||||||||||||| ||||||||||||||  |||||||||||||||| || ||||||||||||||||||| ||||||||||||||||||| ||||||     
T  48989891 ttaaatttgacttgtgggtatacgcttacgcggaacaaaatttcaatttggcacgttttggttgaaaaatcaaaataaatttaaacgacttcaaaatgct 48989990  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| ||| |||||||    
T  48989991 atgaaactttacagatcatttttat 48990015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 36382050 - 36381827
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||    
T  36382050 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 36381951  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||| |||||||||||||||||||||  || |||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||     
T  36381950 ctaaatttg-cttgtgagtatacgcttacgcggaataaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgaattcgaaatgct 36381852  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  36381851 atgaaactttacaaatcctttttat 36381827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 26438982 - 26438757
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  26438982 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 26438883  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  26438882 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 26438783  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  26438782 tatgaaactttacaaatcccttttat 26438757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34406987 - 34406762
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  34406987 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 34406888  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  34406887 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 34406788  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  34406787 tatgaaactttacaaatcccttttat 34406762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 43356368 - 43356593
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  43356368 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 43356467  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  43356468 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 43356567  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  43356568 tatgaaactttacaaatcccttttat 43356593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 47501237 - 47501462
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  47501237 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 47501336  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  47501337 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 47501436  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  47501437 tatgaaactttacaaatcccttttat 47501462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 151; E-Value: 5e-80
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 17510936 - 17510705
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgtt----ctagtcatgcctacaaaattag 96  Q
    ||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||||||||||||||    |||||||| |||||||||||||    
T  17510936 cttaaacaatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgtttgttctagtcatacctacaaaattag 17510837  T
Q  97 ggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaa 196  Q
    |||||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  ||| |||||||| |||||||| ||||||||||||||    
T  17510836 ggaactaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttcaaaaatcaaaataaattgaaacgacttcgaaa 17510737  T
Q  197 tgccatgaaactttacatatcctttttatata 228  Q
    ||| ||||||||||||| ||||||||||||||    
T  17510736 tgctatgaaactttacagatcctttttatata 17510705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 13012652 - 13012877
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    |||||| |||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  13012652 cttaaataatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 13012751  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  13012752 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 13012851  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  13012852 tatgaaactttacaaatcccttttat 13012877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 20129777 - 20130002
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  20129777 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 20129876  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| |||||||| |||||| ||||||||||    
T  20129877 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaattaaaacgatttcgaaatgc 20129976  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  20129977 tatgaaactttacaaatcccttttat 20130002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 30110425 - 30110649
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||| ||||||| |||||||||||| ||||||| |||||||||||||| |||||| ||| |||||||||| | |||||||||||||||||| ||||    
T  30110425 cttaaacactttataactaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttattatcatgttattgtcatgcctacaaaattaaggaa 30110524  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||| ||||||||| |||||||||| || |||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||     
T  30110525 ctaaatttgacctgtgagtatgcgcttacgcagaataaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaatgacttcgaaatgct 30110624  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  30110625 atgaaactttacagatcctttttat 30110649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 149; E-Value: 8e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 48130440 - 48130663
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||| | ||||||| ||||||| |||| | ||||||||||||||||||||||||||  |||||||||||||||||||    
T  48130440 cttaaacaatttataattaatttgtatgtcgtttaaaaactacaatattttattgtgaaggttcttatcatgttctagtattgcctacaaaattagggaa 48130539  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||| ||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||| |||||||||||||| ||||||      
T  48130540 ctaattttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaat-aatttaaacgactttgaaatgtt 48130638  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  48130639 atgaaactttacagatcctttttat 48130663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 10352578 - 10352366
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  10352578 ttataattaatttgtatctcgtttaaaaagtacaaaatttcattgtgaaggttcttatcatgttctaatcatgcctacaaaattagggaactaaatttga 10352479  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| ||||| |  |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  10352478 cttgtgagtatacacttacacggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaacttt 10352381  T
Q  211 acatatcctttttat 225  Q
    ||| || ||||||||    
T  10352380 acagattctttttat 10352366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 30077330 - 30077118
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||| || |||||||||||||||| |||||||||||||||    
T  30077330 ttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttataatcatgcctacaaaatttgggaactaaatttga 30077231  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||| ||||| |||||||  |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  30077230 cttgtgaatatacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaacttt 30077133  T
Q  211 acatatcctttttat 225  Q
    |||||| ||||||||    
T  30077132 acatattctttttat 30077118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 50204782 - 50204568
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||           |||||||||||||||||    
T  50204782 cttaaacaatttataattaatttatatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatg-----------cctacaaaattagggaa 50204694  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaa-tttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |||||||||||||||||||||||||||||||  ||||||| ||||||||||||  ||||||| |||||||||| |||||||||||| |||||||||||||    
T  50204693 ctaaatttgacttgtgagtatacgcttacgcggaacaaaaatttcaattttgcatgttttggatgaaaaatcaaaataaatttaaatgacttcgaaatgc 50204594  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||||||||||    
T  50204593 tatgaaactttacagatcctttttat 50204568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 75 - 228
Target Start/End: Complemental strand, 13391078 - 13390925
Alignment:
Q  75 ctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcata 174  Q
    ||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |    
T  13391078 ctagtcatgtctacaaaattagggaactaaatttgacttgttagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaa 13390979  T
Q  175 ataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttatata 228  Q
    | ||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  13390978 agaaatttaaacgacttcgaaatgctatgaaactttacagatcctttttatata 13390925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 33 - 225
Target Start/End: Original strand, 44157125 - 44157310
Alignment:
Q  33 ttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgca 132  Q
    |||||||||||||||||||| |||||| |||||||| |||||||||||||| |||       | |||||||||||||||||||||||||||||||||||     
T  44157125 ttaaagactacaaaatttcattgtgaaagttcttattatgttctagtcatgtcta-------acggaactaaatttgacttgtgagtatacgcttacgcg 44157217  T
Q  133 taacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
     || ||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  44157218 gaataaaatttcaattttgcatgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgctatgaaactttacagatcctttttat 44157310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 40529479 - 40529600
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||||||||||| | |||||||||||| |||||||||| ||||||||||||||||||||||||||||||| ||||    
T  40529479 cttaaacaatttataattaatttgtatcttgtttaaaaattacaaaatttcattgtgaaggtttttatcatgttctagtcatgcctacaaaattatggaa 40529578  T
Q  101 ctaaatttgacttgtgagtata 122  Q
    ||||||||||||||||||||||    
T  40529579 ctaaatttgacttgtgagtata 40529600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 111 - 225
Target Start/End: Original strand, 26449288 - 26449402
Alignment:
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    |||||||||||||||||||||  ||||||||||||||||||| ||||||| |||||||| || |||||||||||||||||||||||||| ||||||||||    
T  26449288 cttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttgattgaaaaaacaaaataaatttaaacgacttcgaaatgctatgaaacttt 26449387  T
Q  211 acatatcctttttat 225  Q
    ||| ||| |||||||    
T  26449388 acaaatcttttttat 26449402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 103 - 225
Target Start/End: Original strand, 40529651 - 40529773
Alignment:
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  ||||||||| || ||||||||||||||| |||||||||| ||    
T  40529651 aaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaaacaaaataaatttaaacgaattcgaaatgctat 40529750  T
Q  203 gaaactttacatatcctttttat 225  Q
    ||||||||||| ||| |||||||    
T  40529751 gaaactttacagatcttttttat 40529773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 1 - 82
Target Start/End: Complemental strand, 13394946 - 13394865
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcat 82  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  13394946 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcat 13394865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29134335 - 29134111
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||| ||||||| ||||||||| | ||  ||||| | ||  |||||||||| ||||||  ||||||| |||||||| || ||||||||||||||| |||    
T  29134335 cttaatcaatttaaaattaatttttgtcacgtttataaacagcaaaatttcattgtgaaatttcttattatgttctaatcttgcctacaaaattagagaa 29134236  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    | ||||||||| | |||||||||   |||    |||||||||||||||||   ||||||||||||||||| | |||||||| ||||  ||||||||||      
T  29134235 caaaatttgacctatgagtatacaaatactaggaacaaaatttcaattttaaacgttttggttgaaaaataaaaataaattgaaacatcttcgaaatgaa 29134136  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| || ||||||||    
T  29134135 atgaaactttacagattctttttat 29134111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 55 - 228
Target Start/End: Original strand, 56225820 - 56225994
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataac-aaaatttcaattttgcg 153  Q
    |||||||||||| | ||||||||  |||||||||||||||| ||||| |||||||||   |||||||| | |||| |  ||| |||||| |||||||||     
T  56225820 gtgaaggttcttgtgatgttctaaccatgcctacaaaattatggaacgaaatttgacccatgagtatatgtttacccgaaacgaaaattgcaattttgca 56225919  T
Q  154 cgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||| | |||||||| ||||   ||| ||| || ||||||||| |||||||| |||||||||    
T  56225920 cgttttggttgaaaaataaaaataaattgaaacattttcaaaaagctatgaaacttcacatatccattttatata 56225994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 1 - 197
Target Start/End: Original strand, 31853689 - 31853885
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||||||| | | ||||| ||| |||| ||| |  |||||||||||||| | ||||||  ||||||||||||||||   ||    
T  31853689 cttaaacaattcataattaatttgtatttcggttaaacactccaaatttttatggtgaaggttcttatgacgttctaaccatgcctacaaaattaaaaaa 31853788  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaat 197  Q
    |  ||||||||  |||||||||| ||||| ||  |||||||| |||||| ||  |||||||||||||||| | |||||||  ||||| ||| |||||    
T  31853789 cgtaatttgacccgtgagtatacacttactcagtacaaaattgcaatttcgcatgttttggttgaaaaattaaaataaatagaaacgtctttgaaat 31853885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 11 - 83
Target Start/End: Original strand, 1818190 - 1818262
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatg 83  Q
    ||||||||||||||||||| |||| || |||||||||||||| |||||||||||| |||||||||||||||||    
T  1818190 ttataattaatttgtatctcgtttgaaaactacaaaatttcattgtgaaggttctaatcatgttctagtcatg 1818262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9415361 - 9415530
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||| ||||||||||| ||||||| ||  |||||||| |  | ||||||| |||| || ||||   |||| ||| |||||||| |||    
T  9415361 cttaaacaattcataataaatttgtatctcgtttaaaaaccccaaaattttatggcgaaggtttttatgatattctgaccatgtctaaaaaattagagaa 9415460  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    |  ||||||||| || ||||||||||||| |  ||||||||| |||||| ||  ||||||||||||||||    
T  9415461 cggaatttgactcgtaagtatacgcttactcgaaacaaaattgcaatttcgcatgttttggttgaaaaat 9415530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 13502322 - 13502114
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||  || |||  |||||| ||| ||||||||||  ||| | |||||||| |||||||   |||||||||||||||||||||    
T  13502322 cttaaacaattcataattaatccgtctctcatttaaaaactccaaaatttcatggtgtaagttcttatgatgttctgagcatgcctacaaaattagggaa 13502223  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
      ||||||||    || ||||| ||||||    ||||||||| ||||||||| ||||||| ||||||||| | | |||||| ||||  ||| |||||||     
T  13502222 ggaaatttgatccatgtgtatatgcttacttggaacaaaattgcaattttgcacgttttgattgaaaaat-aaagtaaattaaaacatctttgaaatgct 13502124  T
Q  201 atgaaacttt 210  Q
    ||||||||||    
T  13502123 atgaaacttt 13502114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 26547004 - 26546835
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||| ||||||||||||||  |  |||||| |||  |||||||||  || || |||||||| ||||||||   |||||||||||||||| |||    
T  26547004 cttaaaaaattcataattaatttgtacgtcttttaaaaactctaaaatttcatggtaaatgttcttatgatgttctaacaatgcctacaaaattagagaa 26546905  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttgg-ttgaaaaa 169  Q
    |  ||||||||  |||||||||||||||| || ||||||||| ||||||  | |||||||| ||||||||    
T  26546904 cggaatttgacccgtgagtatacgcttactcagaacaaaattgcaatttcacacgttttggattgaaaaa 26546835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 1818266 - 1818353
Alignment:
Q  134 aacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatccttttt 223  Q
    ||||||||||||||||||   |||||||||||||||||| ||||||  |||||||||||||||| | ||||||||||||| || ||||||    
T  1818266 aacaaaatttcaattttgtatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatactatgaaactttacagattcttttt 1818353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 80 - 181
Target Start/End: Complemental strand, 19168388 - 19168287
Alignment:
Q  80 catgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaa 179  Q
    |||||||||||||||||||||| ||||||||||  | |||||| |||||| |  ||||||||| |||||||||  |||| |||| |||||||| ||||||    
T  19168388 catgcctacaaaattagggaacaaaatttgactcataagtatatgcttacccggaacaaaattacaattttgcatgtttaggttaaaaaatcaaaataaa 19168289  T
Q  180 tt 181  Q
    ||    
T  19168288 tt 19168287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 29094610 - 29094683
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgtt 74  Q
    ||||||||||| |||||||||| |||||| ||||||| ||| ||||||||||  |||||||||||||| |||||    
T  29094610 cttaaacaattcataattaattcgtatctcgtttaaaaacttcaaaatttcatggtgaaggttcttatgatgtt 29094683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 4038409 - 4038185
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||| ||||| |||| |||||| ||||| |||||||  || ||||||||||  ||||| |||||||| | |||  |  ||| ||||||||||||| |||    
T  4038409 cttaagcaattcataactaatttatatctcgtttaaaacctccaaaatttcatggtgaaagttcttatgaagttaaaaccatacctacaaaattagagaa 4038310  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    | ||||| ||| |||||||||| | |||| |  ||||||||| |||||   |  ||||||||||| |||| | |||||||| ||||  |||  |||||      
T  4038309 cgaaattagacctgtgagtataggtttactcggaacaaaattgcaattccacaagttttggttgagaaataaaaataaattaaaacatctttaaaatgat 4038210  T
Q  201 atgaaactttacatatcctttttat 225  Q
    | ||||||||||| || ||||||||    
T  4038209 acgaaactttacagattctttttat 4038185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 55 - 163
Target Start/End: Original strand, 9070796 - 9070904
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgc 154  Q
    |||||| || |||| ||||||||  || |||||||||| ||||||||  | ||||||  || |||||| |||||| |||||||||||| ||||||||| |    
T  9070796 gtgaagattattatgatgttctaagcaagcctacaaaactagggaacagagtttgacccgtcagtatatgcttactcataacaaaattgcaattttgcac 9070895  T
Q  155 gttttggtt 163  Q
    |||||||||    
T  9070896 gttttggtt 9070904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 44 - 227
Target Start/End: Complemental strand, 49062614 - 49062431
Alignment:
Q  44 aaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaattt 143  Q
    |||||||||  |||||||||| ||| || |||||  | ||||| ||||| ||| || | ||| ||||| |||||||||||| | ||    ||| |||||     
T  49062614 aaaatttcatggtgaaggttcatataatattctaaccttgccttcaaaactagtgagcgaaaattgacctgtgagtatacgatcacttggaacgaaattg 49062515  T
Q  144 caattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttatat 227  Q
    ||||||||| | |||| |||||||||||| |||||||| |  || ||||||||||| || ||  ||| |||||||||| |||||    
T  49062514 caattttgcacattttagttgaaaaatcaaaataaattgaggcgtcttcgaaatgctataaatgttttcatatcctttctatat 49062431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 199
Target Start/End: Complemental strand, 40529655 - 40529601
Alignment:
Q  145 aattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |||||||| |||||  ||||||||| || ||||||||||||||||||||||||||    
T  40529655 aattttgcacgtttcagttgaaaaaacaaaataaatttaaacgacttcgaaatgc 40529601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 118
Target Start/End: Original strand, 26448544 - 26448591
Alignment:
Q  68 tcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgag 118  Q
    ||||||||||||||||||||||||||||||    |||||||||||||||||    
T  26448544 tcatgttctagtcatgcctacaaaattagg---ataaatttgacttgtgag 26448591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 134 - 179
Target Start/End: Original strand, 6724391 - 6724436
Alignment:
Q  134 aacaaaatttcaattttgcgcgttttggttgaaaaatcataataaa 179  Q
    ||||||||| |||||||||  |||||||||||||||||| ||||||    
T  6724391 aacaaaattgcaattttgcatgttttggttgaaaaatcaaaataaa 6724436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 32 - 117
Target Start/End: Complemental strand, 16877598 - 16877513
Alignment:
Q  32 tttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtga 117  Q
    |||||| ||| ||||||||||  |||| | ||||||| |||| |||  |||||||||||||| ||||||  ||||||||| |||||    
T  16877598 tttaaaaacttcaaaatttcatggtgatgattcttatgatgtcctaaccatgcctacaaaatcagggaatgaaatttgacatgtga 16877513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 104 - 180
Target Start/End: Complemental strand, 29899112 - 29899036
Alignment:
Q  104 aatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaat 180  Q
    |||||||||| ||||| ||  |||||  | || |||||| |||||||||  |||||||||||||||||| |||||||    
T  29899112 aatttgacttatgagtgtatacttactaaaaataaaattacaattttgcatgttttggttgaaaaatcaaaataaat 29899036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Original strand, 53369 - 53596
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  53369 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaa 53468  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  53469 ctaaatttgacttgtgagtatacacttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 53568  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  53569 atgaaactttacatatcctttttatata 53596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 200; Significance: 1e-109; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 16787730 - 16787503
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  16787730 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaagttcttatcatgctctagtcatgcctacaaaattagggaa 16787631  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  16787630 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 16787531  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  16787530 atgaaactttacatatcctttttatata 16787503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 34136506 - 34136279
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34136506 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaa 34136407  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  34136406 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 34136307  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    |||||| |||||||||||||||||||||    
T  34136306 atgaaagtttacatatcctttttatata 34136279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 4404470 - 4404694
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  4404470 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtaaaggttcttatcatgttctagtcatgcctacaaaattagggaa 4404569  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||     
T  4404570 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtcttggttgaaaaatcataataaatttaaacgacttcgaaatgct 4404669  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||| |||||||||||||||||    
T  4404670 atgaaaccttacatatcctttttat 4404694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 23402570 - 23402794
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  23402570 cttaaacaacttataattaatttgtatcttgtttaaagactacaaaatttcactatgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 23402669  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||| ||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||     
T  23402670 ctaaatttgacttgtgagcatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgatttcgaaatgct 23402769  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  23402770 atgaaactttacatatcctttttat 23402794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 9877682 - 9877906
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  9877682 cttaaacaattcataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 9877781  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||| ||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  9877782 ctaaatttgacttgtgagtatatgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgct 9877881  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  9877882 atgaaactttacagatcctttttat 9877906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 7278485 - 7278709
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  7278485 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 7278584  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||| ||||||||||| ||||||||||||||||||||||||||     
T  7278585 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcatgttttgattgaaaaatcaaaataaatttaaacgacttcgaaatgca 7278684  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||| ||||||    
T  7278685 atgaaactttacagatccgttttat 7278709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42231399 - 42231623
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||    
T  42231399 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcatcgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 42231498  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  42231499 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgct 42231598  T
Q  201 atgaaactttacatatcctttttat 225  Q
    || |||||||||| |||||||||||    
T  42231599 ataaaactttacagatcctttttat 42231623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 173; E-Value: 4e-93
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 2728898 - 2728674
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2728898 cttaaacaatttataattaatttgtatctcgtttaaaaactataaaatttcactgtgaaggttcttatcatgttctagtcatgcctataaaattagggaa 2728799  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||| |||||||||||||| |||||||| ||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||     
T  2728798 ctaaatttaacttgtgagtatacacttacgcagaacaaaatttcaattttgaacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgct 2728699  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||| | |||||||||||    
T  2728698 atgaaactttagagatcctttttat 2728674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 3648497 - 3648273
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| ||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3648497 cttaaacaatttataattaatttttatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 3648398  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||| ||||||      
T  3648397 ctaaatttgacttgtgagtatacacttacgcggaacaaaatttcaattttgcacgttttagttgaaaaatcaaaataaatttaaacgactttgaaatgtt 3648298  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  3648297 atgaaactttacatatcctttttat 3648273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 39914978 - 39915203
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  39914978 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 39915077  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  39915078 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 39915177  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  39915178 tatgaaactttacaaatcccttttat 39915203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 29728085 - 29727863
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||  | |||||||||||||||| |||||||||||||    
T  29728085 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttctt--cgtgttctagtcatgcctgcaaaattagggaa 29727988  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| |||||||||||| || ||||||||||     
T  29727987 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaatgatttcgaaatgct 29727888  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  29727887 atgaaactttacagatcctttttat 29727863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 143; E-Value: 3e-75
Query Start/End: Original strand, 19 - 225
Target Start/End: Original strand, 3435726 - 3435932
Alignment:
Q  19 aatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgag 118  Q
    ||||||||||| ||||||| |||||||||||| | |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  3435726 aatttgtatctcgtttaaaaactacaaaatttaattgtgaatgttcttatcatgttctagtcatgcctacataattagggaactaaatttgacttgtgag 3435825  T
Q  119 tatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcc 218  Q
    |||| ||||||||  |||||||||||| |||||||||||||||||||||||||| |||||||||||||||||| ||||||  ||||||||||||| |||     
T  3435826 tatatgcttacgcggaacaaaatttcagttttgcgcgttttggttgaaaaatcaaaataaatttaaacgactttgaaatgttatgaaactttacagatca 3435925  T
Q  219 tttttat 225  Q
    |||||||    
T  3435926 tttttat 3435932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 378886 - 379109
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||| | ||||||| ||||||||||||||||||||||||| |||||||||||||    
T  378886 cttaaacaatttataattaatttgtatctcgtttaaaaactacaaaattttattgtgaagtttcttatcatgttctagtcatgcctgcaaaattagggaa 378985  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     |||||||||| | ||||||||| ||||| |  ||||||| ||||||||||| ||||||||||  ||||| | |||||||| |||||||||||||||||     
T  378986 ttaaatttgacctatgagtatacacttactcggaacaaaaattcaattttgcacgttttggtt-caaaattaaaataaattgaaacgacttcgaaatgct 379084  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  379085 atgaaactttacagatcctttttat 379109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 15838749 - 15838961
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||| | |||||||||||||||||||           |||||||||||||||||    
T  15838749 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaattttattgtgaaggttcttatcatg-----------cctacaaaattagggaa 15838837  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||| |||||||||||||| || |||  ||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||| |     
T  15838838 ctaaatttg-cttgtgagtatacgttttcgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaattct 15838936  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  15838937 atgaaactttacaaatcctttttat 15838961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 40470246 - 40470117
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||  ||||||||||||| |||||||||||||||||||||||||    
T  40470246 cttaaacaatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaatattcttatcatgttttagtcatgcctacaaaattagggaa 40470147  T
Q  101 ctaaatttgacttgtgagtatacgcttacg 130  Q
    ||||||||| ||||||| ||||||||||||    
T  40470146 ctaaatttgccttgtgattatacgcttacg 40470117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 11 - 84
Target Start/End: Original strand, 36409020 - 36409093
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgc 84  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  36409020 ttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttctaatcatgttctagtcatgc 36409093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 199
Target Start/End: Original strand, 29351824 - 29352022
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||| || |||||||||||||| |  |||| ||| |||||| |||  ||||| ||| ||||  |||||||  |||||||||||| ||||||||    
T  29351824 cttaaaaaattcattattaatttgtatctcgagtaaaaactccaaaatctcatggtgaaagtttttatgctgttctaaccatgcctacaaagttagggaa 29351923  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    |  |||||||||  |||||||||| ||||    ||||||||| |||||| || ||||||||||||||||| | || ||||| ||||| ||| |||||||    
T  29351924 cataatttgactcatgagtatacgtttactaggaacaaaattgcaatttcgcacgttttggttgaaaaataaaaacaaattaaaacgtctttgaaatgc 29352022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 223
Target Start/End: Original strand, 36409096 - 36409183
Alignment:
Q  134 aacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatccttttt 223  Q
    |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||||| || ||||||    
T  36409096 aacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaactttacagattcttttt 36409183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 9175596 - 9175765
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| || ||||||||||||||| ||| ||||||| ||| ||||| ||||  ||||||| |||||| ||||||||    |||||||||||||||||||    
T  9175596 cttaaataacttataattaatttgtctctcgtttaaaaactgcaaaacttcatagtgaaggatcttattatgttctaacattgcctacaaaattagggaa 9175695  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    | |||||||||   |||||| | ||||||    |||||||||| |||||||| | |||| ||||||||||    
T  9175696 caaaatttgacccatgagtaaatgcttactaggaacaaaattttaattttgcacattttagttgaaaaat 9175765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 81 - 181
Target Start/End: Original strand, 17479972 - 17480072
Alignment:
Q  81 atgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaat 180  Q
    ||||||||||||||||||||| |||||||||| ||||||||| | |||| || || |||||| ||||||| | | ||||||||||||||||| |||||||    
T  17479972 atgcctacaaaattagggaacaaaatttgactcgtgagtatatgtttactcagaagaaaattgcaattttacacattttggttgaaaaatcaaaataaat 17480071  T
Q  181 t 181  Q
    |    
T  17480072 t 17480072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 10 - 170
Target Start/End: Complemental strand, 29892250 - 29892090
Alignment:
Q  10 tttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttg 109  Q
    ||||||||||||| |||||| ||||||| |||  |||| |||||   ||| |||||||| ||||| ||  ||||| || |||||||| |||  |||||||    
T  29892250 tttataattaattcgtatctcgtttaaaaactctaaaaattcacgaggaaagttcttatgatgttatatacatgcttagaaaattagagaaagaaatttg 29892151  T
Q  110 acttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    ||  ||||||||||  |||| |||||||||||| |||||| || |||||||||||||||||    
T  29892150 acccgtgagtatacatttactcataacaaaattgcaatttcgcacgttttggttgaaaaat 29892090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32540169 - 32539958
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| ||||||||||||||| || |||  |||||| | || ||||||||| | ||||||||||||| ||||||||  |||||||||||||||          
T  32540169 cttaaaaaatttataattaattcgtctctcatttaaaaattataaaatttcattttgaaggttcttattatgttctaaccatgcctacaaaatt------ 32540076  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
           ||||   |||||||| ||||||    ||||||||||||||||| |  |||||||||||||||| | |||||||| ||||| |||||||||||     
T  32540075 -------tgacacatgagtatatgcttactaggaacaaaatttcaattttacatgttttggttgaaaaataaaaataaattgaaacgtcttcgaaatgct 32539983  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||  | |||||||||||    
T  32539982 atgaaactttggagatcctttttat 32539958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 8 - 210
Target Start/End: Complemental strand, 40401204 - 40401002
Alignment:
Q  8 aatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatt 107  Q
    ||||||||||||||| || ||| ||| ||| ||| || ||| |||   ||||||||||||| ||||||||   |||||   ||||||||||||  |||||    
T  40401204 aatttataattaattcgtctctcgttcaaaaactccagaatgtcatgttgaaggttcttatgatgttctaactatgcccgtaaaattagggaatgaaatt 40401105  T
Q  108 tgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaac 207  Q
    |||  ||||||||||||||||| |  || |||||| ||||||||   |||||||||||||||| | |||||||  ||||| |||| |||||  |||||||    
T  40401104 tgagctgtgagtatacgcttactcggaataaaattgcaattttgtatgttttggttgaaaaataaaaataaatcgaaacgtcttcaaaatgatatgaaac 40401005  T
Q  208 ttt 210  Q
    |||    
T  40401004 ttt 40401002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 80 - 181
Target Start/End: Original strand, 33639179 - 33639280
Alignment:
Q  80 catgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaa 179  Q
    |||||||||||||||||||||| ||||||||  |||||||||| ||||||    |  |||||| ||||||||| ||||||||||||||||||| ||||||    
T  33639179 catgcctacaaaattagggaacaaaatttgatgtgtgagtatatgcttacttggagaaaaattgcaattttgcacgttttggttgaaaaatcaaaataaa 33639278  T
Q  180 tt 181  Q
    ||    
T  33639279 tt 33639280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 122
Target Start/End: Original strand, 19049 - 19171
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttc-actgtgaaggttcttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||| |||||||||||||  || ||||||| ||| |||||||||  | |||||| |||||||  | |||||  |||||  |||||||||||||    
T  19049 cttaaacaattaataattaatttgtccctggtttaaaaacttcaaaatttcgtcggtgaagattcttatggtattctaaccatgcaaacaaaattaggga 19148  T
Q  100 actaaatttgacttgtgagtata 122  Q
    || |||||||||  |||||||||    
T  19149 acaaaatttgaccagtgagtata 19171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 55 - 181
Target Start/End: Complemental strand, 32964159 - 32964033
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgc 154  Q
    |||||||| ||||| ||||| ||  |||||  ||||||||||||||| |||||||||  |||| || | |||||| |  ||||||| | ||||||||||     
T  32964159 gtgaaggtccttatgatgttataaacatgctaacaaaattagggaacgaaatttgacccgtgattaaatgcttactctgaacaaaaatgcaattttgcgt 32964060  T
Q  155 gttttggttgaaaaatcataataaatt 181  Q
    || ||||||||||||| | ||||||||    
T  32964059 gtcttggttgaaaaattaaaataaatt 32964033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 172
Target Start/End: Complemental strand, 35852643 - 35852472
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||| ||  |||| ||||| ||| |||  ||| |  ||||| ||| |||| ||||||||  |||||||| |||||||| |||    
T  35852643 cttaaacaattcataattaattggtcccttgattaaaaactccaattttttatggtgaaagtttttatgatgttctaaccatgcctataaaattagagaa 35852544  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatca 172  Q
    | |||||| ||| ||||||||  |||||  |  ||||||||| ||||||     ||||||||||||||||||    
T  35852543 caaaattttactcgtgagtatttgcttattcggaacaaaattgcaatttcatatgttttggttgaaaaatca 35852472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 128
Target Start/End: Complemental strand, 15541921 - 15541795
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||| |||||  ||| || ||||||||| | ||| | |||||| |  |||||||||||||  ||||||||  ||||  ||||||||||||||||    
T  15541921 ttaaacaattcataatcgattcgtctcttgtttagaaactcccaaatttaatggtgaaggttcttactatgttctaaccatgtatacaaaattagggaac 15541822  T
Q  102 taaatttgacttgtgagtatacgctta 128  Q
      |||||||||  |||||||| |||||    
T  15541821 ataatttgactcctgagtatatgctta 15541795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 15863331 - 15863282
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaattt 50  Q
    ||||||||||| |||||||||| |||||| ||||||| ||| ||||||||    
T  15863331 cttaaacaattcataattaattcgtatctcgtttaaaaactccaaaattt 15863282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 84 - 180
Target Start/End: Original strand, 28296226 - 28296322
Alignment:
Q  84 cctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaat 180  Q
    ||||||||||| || ||| |||||||||| |||  |||| | |||| || |||||| || | ||||||| | ||||||||||||||| | |||||||    
T  28296226 cctacaaaatttggaaacgaaatttgactagtggttatatgtttactcaaaacaaagttgcgattttgcacattttggttgaaaaatgagaataaat 28296322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 153 - 225
Target Start/End: Original strand, 32750519 - 32750591
Alignment:
Q  153 gcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
    |||||||||||||||||| | ||||||   ||||| ||| ||||||| | |||||||| || |||||||||||    
T  32750519 gcgttttggttgaaaaataaaaataaaccgaaacgtctttgaaatgctacgaaactttgcaaatcctttttat 32750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 197; Significance: 1e-107; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28997192 - 28997416
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  28997192 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgcgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 28997291  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||     
T  28997292 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacattttggttgaaaaatcataataaatttaaacgacttcgaaatgct 28997391  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  28997392 atgaaactttacatatcctttttat 28997416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34948486 - 34948262
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||    
T  34948486 cttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaa 34948387  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||| ||||     
T  34948386 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgct 34948287  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  34948286 atgaaactttacagatcctttttat 34948262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 399081 - 399306
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  399081 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 399180  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  399181 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 399280  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  399281 tatgaaactttacaaatcccttttat 399306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 8 - 213
Target Start/End: Complemental strand, 33229033 - 33228830
Alignment:
Q  8 aatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatt 107  Q
    |||||||||||||||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  33229033 aatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctgcaaaattagggaactaaatt 33228934  T
Q  108 tgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaac 207  Q
    |||||||||||| ||| |||||||  |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| |||||||    
T  33228933 tgacttgtgagtgtacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaac 33228836  T
Q  208 tttaca 213  Q
    ||||||    
T  33228835 tttaca 33228830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 13838261 - 13838487
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||||||||||||||||||| | ||||||| | |||||||||||| ||||||||||||||||  |||| ||||||| |||||||||||||||||    
T  13838261 ttaaacaatttataattaatttgtatatcgtttaaaaattacaaaatttcattgtgaaggttcttatctagttccagtcatgtctacaaaattagggaac 13838360  T
Q  102 taaatttga---cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatg 198  Q
    |||||| ||   |||||||||||||||||||||  ||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||||||||    
T  13838361 taaattcgatcacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttagttgaaaaatcaaaataaatttaaacgacttcgaaatg 13838460  T
Q  199 ccatgaaactttacatatcctttttat 225  Q
      |||||||||||||||||||||||||    
T  13838461 ttatgaaactttacatatcctttttat 13838487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 29743757 - 29743969
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    ||||||||||||||||||| ||||||| |||||||||||||| |||||| ||||||||||||||| | |||||||||||||||||||||| |||||||||    
T  29743757 ttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaatgttcttatcatgttccaatcatgcctacaaaattagggaattaaatttga 29743856  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| |||||||  |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  29743857 cttgtgagtatacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaacttt 29743954  T
Q  211 acatatcctttttat 225  Q
    ||| || ||||||||    
T  29743955 acagattctttttat 29743969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 10231763 - 10231932
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||| ||||||  ||||||  || ||||||||||  ||||||||||||||  |||||||  |||||||| ||||||||  ||    
T  10231763 cttaaacaattaataattaattcgtatctcatttaaaatcttcaaaatttcatggtgaaggttcttatgttgttctaaccatgcctagaaaattagaaaa 10231862  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    | |||||||||| |||| |||| | |||| || ||||||||| ||||||  | |||||||||||||||||    
T  10231863 cgaaatttgactcgtgaatatatgtttactcagaacaaaattgcaatttcacacgttttggttgaaaaat 10231932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 28931473 - 28931692
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||| |||| ||||||||||| ||||||||||||| ||| ||||||| ||   ||||| || |||| |  |||||  ||||||||||||||||| ||||     
T  28931473 taaataattcataattaatttttatcttgtttaaaaacttcaaaattgcatgttgaagattgttatgaccttctaaccatgcctacaaaattagagaacg 28931572  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    |||||||||  || ||||||||||||| |  ||||||||| |||||| || | |||||||| |||||| | |||||||  ||| | ||| ||||||| |     
T  28931573 aaatttgacccgtaagtatacgcttacacggaacaaaattgcaatttcgcacattttggttcaaaaattaaaataaatcgaaatgtctttgaaatgctac 28931672  T
Q  203 gaaactttacatatcctttt 222  Q
    |||||||| || ||||||||    
T  28931673 gaaactttgcagatcctttt 28931692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 23217452 - 23217599
Alignment:
Q  62 ttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttgg 161  Q
    ||||||| ||||||||  |||||||||||||||| ||||| ||||||||| |  ||||||||  ||||    ||||||||||||||||| | ||||||||    
T  23217452 ttcttattatgttctaaccatgcctacaaaattaaggaacgaaatttgacctaagagtatacaattactaggaacaaaatttcaatttttcacgttttgg 23217551  T
Q  162 ttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    || |||||| | |||||||| ||||  ||||||||||  ||||||||||    
T  23217552 tt-aaaaataaaaataaattaaaacatcttcgaaatgatatgaaacttt 23217599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 1 - 181
Target Start/End: Complemental strand, 31373388 - 31373208
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| ||||||||||  |  || ||||||| ||| ||||||||   ||||||||||||||| ||||| ||  | |||||||||||||||||||    
T  31373388 cttaaacaattcataattaattcatcactcgtttaaaaacttcaaaattttgttgtgaaggttcttatgatgttttaaccttgcctacaaaattagggaa 31373289  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatt 181  Q
    || |||||||   || |||||| || ||| |  |||||||||   |||||||   ||||||||||||||||| ||||||||    
T  31373288 ctgaatttgatccgttagtatatgcctactcgaaacaaaattgtgattttgcatattttggttgaaaaatcaaaataaatt 31373208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 18339556 - 18339594
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaaga 39  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  18339556 cttaaacaatttataattaatttgtatctcgtttaaaga 18339594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 29341577 - 29341647
Alignment:
Q  80 catgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaatttt 150  Q
    ||||||||||||||| | |||| ||||||||| ||||||| ||||||||| |  ||||||||| |||||||    
T  29341577 catgcctacaaaattggagaacaaaatttgacgtgtgagtttacgcttactcgaaacaaaattacaatttt 29341647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 21556465 - 21556351
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtc----atgcctacaaaattag 96  Q
    |||||| |||| ||||||||||||||||||||| ||  ||| |||||||| |  ||||| |||||| | ||||||||  |    |||||||| |||||||    
T  21556465 cttaaaaaattcataattaatttgtatcttgttaaataactccaaaattttatggtgaaagttcttttgatgttctaaacatgaatgcctactaaattag 21556366  T
Q  97 ggaactaaatttgac 111  Q
    ||||| |||||||||    
T  21556365 ggaacaaaatttgac 21556351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 197; Significance: 1e-107; HSPs: 21)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 35907990 - 35908214
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  35907990 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcatacaaaattagggaa 35908089  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||     
T  35908090 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgatttcgaaatgct 35908189  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  35908190 atgaaactttacatatcctttttat 35908214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 3829445 - 3829668
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||    
T  3829445 cttaaacaatttataattaatttgtatctcgtttaaaaactacaaa-tttcattgtgaaggttcttatcatgttctagtcatgcctacaaagttagggaa 3829543  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||     
T  3829544 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgct 3829643  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  3829644 atgaaactttacaaatcctttttat 3829668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 17445756 - 17445980
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| ||||    
T  17445756 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttcattatgaaggttcttatcatgttctagtcatgcctacaaaattaaggaa 17445855  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||||||||||||| |||||||||||||||||||||||||      
T  17445856 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcaagttttggttgaaaaatcaaaataaatttaaacgacttcgaaatgtt 17445955  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  17445956 atgaaactttacagatcctttttat 17445980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 42310644 - 42310420
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  42310644 cttaaacaatttataattaatttgtatctagtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 42310545  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||| |  ||||  |||||||||||| ||||||||||||||||||||||||||     
T  42310544 ctaaatttgacttgtgagtatacgcttacgcgaaacaaaatttcaattttacatgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 42310445  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  42310444 atgaaactttacagatcctttttat 42310420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 168; E-Value: 4e-90
Query Start/End: Original strand, 2 - 225
Target Start/End: Original strand, 23313458 - 23313681
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23313458 ttaaacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 23313557  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcca 201  Q
    |||||||||||| |||||||||||||||||| ||||||||||||||||||  |||||  |||||||||||| ||||||||||||||||||||| |||| |    
T  23313558 taaatttgacttatgagtatacgcttacgcagaacaaaatttcaattttgaacgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgcta 23313657  T
Q  202 tgaaactttacatatcctttttat 225  Q
    |||||||||||| |||||||||||    
T  23313658 tgaaactttacagatcctttttat 23313681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 41971962 - 41971737
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| || || ||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  41971962 cttaaacaatttataattaatttatacctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 41971863  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcg-ttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
     |||||||||| |||||||||||||||||||  ||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||| |||||||    
T  41971862 ttaaatttgacctgtgagtatacgcttacgctgaacaaaatttcaattttgcacgtttttggttgaaaaatcaaaataaatttaaacgactttgaaatgc 41971763  T
Q  200 catgaaactttacatatcctttttat 225  Q
     || |||||||||| |||||||||||    
T  41971762 tataaaactttacaaatcctttttat 41971737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 5 - 225
Target Start/End: Original strand, 7433888 - 7434108
Alignment:
Q  5 aacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaa 104  Q
    ||||||||||||||||||||||||| ||||||| | |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  7433888 aacaatttataattaatttgtatctcgtttaaaaattacaaaatttcattgtgaaggttcttgtcatgttctagtcatgcctacaaaattagggaactaa 7433987  T
Q  105 atttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatga 204  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||  ||||  |||||||||||| ||||||||||||||||||||| |||| ||||    
T  7433988 atttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcatgtttcagttgaaaaatcaaaataaatttaaacgacttcgatatgctatga 7434087  T
Q  205 aactttacatatcctttttat 225  Q
    ||||||||| | |||||||||    
T  7434088 aactttacagaacctttttat 7434108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 32981760 - 32981536
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||| ||| | || ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||||    
T  32981760 cttaaacaatttataattaatttgtatctcgttgaaaaattataaaattttattgtgaaggttcttatcatgttctagtcatgcctacaaaatttgggaa 32981661  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||| | ||||||||  ||||||||||||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||     
T  32981660 ctaaatttgacttgtgagtaaatgcttacgcggaacaaaatttcaattttgcacgtttttgttgaaaaatcaaaataaatttaaacgacttcgaaatgct 32981561  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| |||||||||||    
T  32981560 atgaaactttacagatcctttttat 32981536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 11958054 - 11957830
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||| ||||||| |||||||||||||| |||||||||||||||||||||||| ||||||||| |||||||| |||    
T  11958054 cttaaataatttataattaatttgtatctcgtttaaaaactacaaaatttcattgtgaaggttcttatcatgttctaatcatgcctagaaaattagtgaa 11957955  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     | ||||||||||||||||||||||||| ||  ||||||||| ||||||||| |||||| |||||||||||| ||||||||||||||||||||||||||     
T  11957954 ttgaatttgacttgtgagtatacgcttatgcggaacaaaattgcaattttgcacgtttttgttgaaaaatcaaaataaatttaaacgacttcgaaatgct 11957855  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||| ||||||||||||    
T  11957854 atgaaactttacgtatcctttttat 11957830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 28463410 - 28463623
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||| | ||||||| |||||||||||||| |||||||||||           ||||||||||| |||||||||||||    
T  28463410 cttaaacaatttataattaatttgtatttcgtttaaaaactacaaaatttcattgtgaaggttc-----------tagtcatgcctgcaaaattagggaa 28463498  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
     ||| |||||| ||||||||||||||||  |  |||||||||||||||||||  |||||||||||||||||| |||||||| |||||||||| ||||||     
T  28463499 ttaattttgacctgtgagtatacgcttattcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaattgaaacgacttcaaaatgct 28463598  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||| || ||||||| |||||||    
T  28463599 atgaaatttcacatatcatttttat 28463623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 130
Target Start/End: Original strand, 33490168 - 33490297
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||| |||||| ||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||    
T  33490168 cttaaacaatttataattaattcgtatctcgtttaaaaactacaaaatttcattgtgaaggttattatcatgttctagtcatgcctacaaaattagggaa 33490267  T
Q  101 ctaaatttgacttgtgagtatacgcttacg 130  Q
    |||||||||||||| | |||||||||||||    
T  33490268 ctaaatttgacttgcgggtatacgcttacg 33490297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 55 - 225
Target Start/End: Original strand, 42412370 - 42412539
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgc 154  Q
    |||||| ||||||| ||||| ||  |||  ||||| ||||||| ||| ||||||||| |||||||||||||| |  |  ||||||||| ||||||| | |    
T  42412370 gtgaagattcttatgatgttttaaccatatctacagaattaggaaacgaaatttgacctgtgagtatacgct-attcggaacaaaattgcaattttacac 42412468  T
Q  155 gttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
    |||||||||||||| | | |||||||  ||||  |||| |||||| |||||||||| || ||| |||||||    
T  42412469 gttttggttgaaaactaaaaataaatcaaaacatcttcaaaatgctatgaaactttgcagatcttttttat 42412539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 141 - 225
Target Start/End: Complemental strand, 321243 - 321159
Alignment:
Q  141 tttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
    ||||||||||||  ||| ||||| |||||||| ||||||| |||||||||||||||||  ||||||||||||  ||| |||||||    
T  321243 tttcaattttgcatgttctggttaaaaaatcaaaataaatgtaaacgacttcgaaatgttatgaaactttacggatcatttttat 321159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 65 - 181
Target Start/End: Original strand, 3604778 - 3604894
Alignment:
Q  65 ttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttg 164  Q
    |||| ||||||||  |||||||||||||||||||||  |||||||||   ||||||||  ||||| |  ||||||||  ||||||| |  ||||||||||    
T  3604778 ttatgatgttctaaccatgcctacaaaattagggaataaaatttgacccttgagtatatacttactcgaaacaaaatagcaattttacatgttttggttg 3604877  T
Q  165 aaaaatcataataaatt 181  Q
    |||||||| ||||||||    
T  3604878 aaaaatcaaaataaatt 3604894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 29 - 221
Target Start/End: Complemental strand, 17457927 - 17457736
Alignment:
Q  29 ttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgctta 128  Q
    ||||||||| ||| ||||||||||  || ||  ||||||| |||||||||  |||||| |||||||| |||||  ||||||||  |  |||||| | |||    
T  17457927 ttgtttaaa-actccaaaatttcatggtcaatattcttatgatgttctagctatgccttcaaaattaaggaacacaatttgacccgcaagtatatgttta 17457829  T
Q  129 cgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatccttt 221  Q
    | || ||||||||| ||||||||| | ||||||||||||  ||| |||||||| |  |  ||||||||||| || ||||||| || |||||||    
T  17457828 ctcaaaacaaaattgcaattttgcacattttggttgaaaggtcaaaataaattaaggcttcttcgaaatgctataaaactttccagatccttt 17457736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 8 - 111
Target Start/End: Complemental strand, 5715507 - 5715404
Alignment:
Q  8 aatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatt 107  Q
    |||| |||||||||| |||||| ||||||| | | |||||||| |  |||||| ||||||| ||||| ||  ||||||||||||||||  |||| |||||    
T  5715507 aattcataattaattcgtatctcgtttaaaaattccaaaattttatggtgaagtttcttatgatgttttaaccatgcctacaaaattatagaacaaaatt 5715408  T
Q  108 tgac 111  Q
    ||||    
T  5715407 tgac 5715404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 43 - 225
Target Start/End: Original strand, 17744629 - 17744811
Alignment:
Q  43 caaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatt 142  Q
    ||||||||||   ||||| ||||||| ||||||||  ||| ||||||||||||  |||| |||||||||  || |||||| |||||| |  || | ||||    
T  17744629 caaaatttcatgttgaagtttcttatgatgttctaaccattcctacaaaattatagaacaaaatttgacccgtcagtatatgcttactctgaatagaatt 17744728  T
Q  143 tcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatcctttttat 225  Q
     |||||| || |||||||| | |||||| | |||||||  |||   ||| ||||||| |||||| ||| || |||||||||||    
T  17744729 gcaatttcgcacgttttggctaaaaaataaaaataaatcgaaaaatctttgaaatgctatgaaatttttcaaatcctttttat 17744811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 56 - 170
Target Start/End: Complemental strand, 18716396 - 18716283
Alignment:
Q  56 tgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcg 155  Q
    ||||||||||||| ||||||||  |||| ||| ||||||||||||  |||||||||  |||| |||| |||||| || ||  |||||||||||||||  |    
T  18716396 tgaaggttcttatgatgttctaaccatgtctataaaattagggaataaaatttgacccgtgaatatatgcttactca-aaataaatttcaattttgcatg 18716298  T
Q  156 ttttggttgaaaaat 170  Q
    || | ||||||||||    
T  18716297 ttgttgttgaaaaat 18716283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 81 - 128
Target Start/End: Complemental strand, 30094690 - 30094643
Alignment:
Q  81 atgcctacaaaattagggaactaaatttgacttgtgagtatacgctta 128  Q
    ||||||||||||||||||||| ||||||||||  |||||||| |||||    
T  30094690 atgcctacaaaattagggaacgaaatttgactcatgagtatatgctta 30094643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 129
Target Start/End: Original strand, 32944424 - 32944498
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttac 129  Q
    ||||| |||||||| ||||||||  ||||| || ||||||||||||| ||||||||   ||||||||| ||||||    
T  32944424 gtgaatgttcttatgatgttctaagcatgcttataaaattagggaacaaaatttgatcagtgagtatatgcttac 32944498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 40194304 - 40194218
Alignment:
Q  124 gcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    |||||| || || |||||| |||| |||  ||| || |||||||||||| ||||| || ||||| ||||||||||| ||||||||||    
T  40194304 gcttactcaaaataaaattgcaatattgtacgtcttagttgaaaaatcaaaataatttgaaacgtcttcgaaatgctatgaaacttt 40194218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 193; Significance: 1e-105; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6930598 - 6930374
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  6930598 cttaaacaatttataattaatttgtatctcgtttaaagactacaaaatttccttgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 6930499  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  6930498 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 6930399  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||||||| |||||||    
T  6930398 atgaaactttacatatcttttttat 6930374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 228
Target Start/End: Complemental strand, 6503274 - 6503047
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||  |||||||||||||||||||||||||||    
T  6503274 cttaaacaatttataattaatttgtatctcgtttaaagactacgaaatttcactgtgaaggttcttatcatactctagtcatgcctacaaaattagggaa 6503175  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||      
T  6503174 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgat 6503075  T
Q  201 atgaaactttacatatcctttttatata 228  Q
    ||||||||||||||||||||||||||||    
T  6503074 atgaaactttacatatcctttttatata 6503047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 45183443 - 45183666
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||||||||    
T  45183443 cttaaaaaatttataattaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgttttagtcatgcctacaaa-ttagggaa 45183541  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||     
T  45183542 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataaatttaaacgacttcgaaatgct 45183641  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  45183642 atgaaactttacatatcctttttat 45183666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 181; E-Value: 7e-98
Query Start/End: Original strand, 16 - 228
Target Start/End: Complemental strand, 11017959 - 11017747
Alignment:
Q  16 attaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgt 115  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  11017959 attaatttgtatctcgtttaaagactacaaaatttcactgtgaaggttcttatcatgctctagtcatgcctacaaaattagggaactaaatttgacttgt 11017860  T
Q  116 gagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacata 215  Q
     |||||||||||||||  ||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  11017859 aagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttaaaaaatcataataaatttaaacgacttcgaaatgctatgaaactttacata 11017760  T
Q  216 tcctttttatata 228  Q
    |||||||||||||    
T  11017759 tcctttttatata 11017747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 175; E-Value: 3e-94
Query Start/End: Original strand, 3 - 228
Target Start/End: Original strand, 33041416 - 33041639
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    |||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33041416 taaacaatttataattaatttgtatctcatttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 33041515  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    ||||||||| |||  ||||||||||||||  ||||||||||||||||||| ||||||||||||||||||||||||| ||||||| |||||||||||| ||    
T  33041516 aaatttgacctgt--gtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcataataactttaaacaacttcgaaatgctat 33041613  T
Q  203 gaaactttacatatcctttttatata 228  Q
    |||||||||||||||||| |||||||    
T  33041614 gaaactttacatatccttattatata 33041639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 40081444 - 40081220
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| | || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  40081444 cttaaacaatttataattaatttgtatctcgtttaaaaattataaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 40081345  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||     
T  40081344 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 40081245  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| ||| |||||||    
T  40081244 atgaaactttacagatcttttttat 40081220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 5135750 - 5135974
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||||||| ||||||||||||||||||||| ||||||||||||| ||| |||||||    
T  5135750 cttaaacaatttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttatagtcatgcctacgaaaatagggaa 5135849  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    |||||||||||||||||||||||||||||||  ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||||||||     
T  5135850 ctaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaatgacttcgaaatgct 5135949  T
Q  201 atgaaactttacatatcctttttat 225  Q
    ||||||||||||| ||| |||||||    
T  5135950 atgaaactttacagatcttttttat 5135974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 161; E-Value: 6e-86
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 34083823 - 34083600
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||| ||||| ||||||| | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34083823 cttaaacaatttataattaatttatatctcgtttaaaaattacaaaatttcattgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 34083724  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||| ||| |||||| ||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||     
T  34083723 ctaaatttg-cttctgagtacacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgct 34083625  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||||||||||||||||||||||    
T  34083624 atgaaactttacatatcctttttat 34083600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 158; E-Value: 3e-84
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 6269129 - 6268904
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  6269129 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 6269030  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  6269029 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 6268930  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  6268929 tatgaaactttacaaatcccttttat 6268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 22968147 - 22967924
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  22968147 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 22968048  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  22968047 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 22967948  T
Q  200 catgaaactttacatatccttttt 223  Q
     ||||||||||||| |||| ||||    
T  22967947 tatgaaactttacaaatccctttt 22967924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 39772254 - 39772479
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttc-ttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| |||| |||||||||||||||||||||||||||||||||||    
T  39772254 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgttccttatcatgttctagtcatgcctacaaaattaggga 39772353  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  39772354 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 39772453  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  39772454 tatgaaactttacaaatcccttttat 39772479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 27935639 - 27935862
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    |||||||||||| |||||||||||||||  ||||||| |||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||    
T  27935639 cttaaacaatttgtaattaatttgtatcc-gtttaaaaactacaaaatttcattgtgaagattcttataatgttctagtcatgcctacaaaattagggaa 27935737  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgcc 200  Q
    ||||||||||||||||||||||| |||||||  ||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||||||||      
T  27935738 ctaaatttgacttgtgagtatacacttacgcggaacaaaatttcaattttgcacgttttggttgaaaaatcaaaataaatttaaacgaattcgaaatgtt 27935837  T
Q  201 atgaaactttacatatcctttttat 225  Q
    |||||| |||||| |||||||||||    
T  27935838 atgaaattttacagatcctttttat 27935862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 19390610 - 19390835
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||||||| |||||||||||||||||||||||||||||||||| |    
T  19390610 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatgcctacaaaattaggaa 19390709  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||| ||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| |||||||||||||||||||||||||     
T  19390710 actaaatttgactggtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgt 19390809  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  19390810 aatgaaactttacaaatcccttttat 19390835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 144; E-Value: 8e-76
Query Start/End: Original strand, 11 - 225
Target Start/End: Complemental strand, 19565195 - 19564983
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    |||||||||||||||||||  |||||| |||||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||    
T  19565195 ttataattaatttgtatctcatttaaaaactacaaaatttcattgtgaaggttcttatcatgttctaatcatgcctacaaaattagagaactaaatttga 19565096  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| |||||||  |||||||||||||||||||  |||||||||||||||||| ||||||  |||||||||||||||||| ||||||||||    
T  19565095 cttgtgagtatacacttacgcggaacaaaatttcaattttgcatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgaaacttt 19564998  T
Q  211 acatatcctttttat 225  Q
    ||| || ||||||||    
T  19564997 acagattctttttat 19564983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 11 - 225
Target Start/End: Original strand, 45336346 - 45336558
Alignment:
Q  11 ttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttga 110  Q
    |||||||||||||||||||  |||||| |||||||||||||| ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  45336346 ttataattaatttgtatctcatttaaaaactacaaaatttcattgtaaaggttcttatcatgttctaatcatgcctacaaaatttgggaactaaatttga 45336445  T
Q  111 cttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaacttt 210  Q
    ||||||||||||| |||||||  ||||||||||||||||| |  |||||||||||||||||| ||||||  |||||||||||||||||| |||| |||||    
T  45336446 cttgtgagtatacacttacgcggaacaaaatttcaattttacatgttttggttgaaaaatcaaaataaa--taaacgacttcgaaatgctatgatacttt 45336543  T
Q  211 acatatcctttttat 225  Q
    ||| || ||||||||    
T  45336544 acagattctttttat 45336558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 3 - 179
Target Start/End: Original strand, 27912468 - 27912644
Alignment:
Q  3 taaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaact 102  Q
    ||||||||| |||||||||||||  || ||||||| ||| ||||||||||  ||| | ||||||||||||||| |  ||||||| |||| |||||||||     
T  27912468 taaacaattcataattaatttgtccctcgtttaaaaactccaaaatttcatggtgcatgttcttatcatgttccaaccatgcctgcaaatttagggaaca 27912567  T
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaa 179  Q
    ||||||||| | |||||||| |||||| || | ||||||| ||||||||  ||||||||||||||||||| ||||||    
T  27912568 aaatttgacctatgagtatatgcttactcagatcaaaattacaattttgaacgttttggttgaaaaatcaaaataaa 27912644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29564857 - 29564674
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||| || |  ||||| |||| ||||||||| ||||||||||||||| ||||||||  |||||||||||||||| ||||    
T  29564857 cttaaacaatttataattaatttgtctcat--ttaaaaactataaaatttcattgtgaaggttcttattatgttctaaccatgcctacaaaattaaggaa 29564760  T
Q  101 c-----taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcg-ttttggttgaaaaatcataataaat 180  Q
    |     | |||||||| |||||||||||||||||    |||||||||| |||||||| || ||||||||||||||| | |||||||    
T  29564759 catgatttaatttgacatgtgagtatacgcttactaggaacaaaatttaaattttgcacgtttttggttgaaaaataaaaataaat 29564674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 103 - 228
Target Start/End: Original strand, 8257407 - 8257532
Alignment:
Q  103 aaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccat 202  Q
    ||||||||  |||||||||||||||||    ||||||||||||||||||| ||||||||||||||||| | |||||||| ||||| ||| ||||||| ||    
T  8257407 aaatttgatctgtgagtatacgcttactaggaacaaaatttcaattttgcacgttttggttgaaaaataaaaataaattgaaacgtctttgaaatgctat 8257506  T
Q  203 gaaactttacatatcctttttatata 228  Q
    |||||||| |||||||||||||||||    
T  8257507 gaaactttgcatatcctttttatata 8257532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 113 - 223
Target Start/End: Complemental strand, 1185808 - 1185698
Alignment:
Q  113 tgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttac 212  Q
    ||||||||||  | |||||  |||||||||| |||||||| |||||| |||||||||||| ||||||||||||||||||||||||||  ||||||||||     
T  1185808 tgtgagtataaacctacgcggaacaaaattttaattttgcacgtttttgttgaaaaatcaaaataaatttaaacgacttcgaaatgctctgaaactttat 1185709  T
Q  213 atatccttttt 223  Q
    | |||||||||    
T  1185708 agatccttttt 1185698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 129
Target Start/End: Original strand, 38282878 - 38282995
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||| |||||| |||||| ||| |||||||||           ||||||||||||| ||    
T  38282878 cttaaacaatttataattaatttgtatctcgtttaaaaactacaagatttcattgtgaatgttattatcatgt-----------ctacaaaattaggaaa 38282966  T
Q  101 ctaaatttgacttgtgagtatacgcttac 129  Q
    ||||||||||| |||||||||||||||||    
T  38282967 ctaaatttgacctgtgagtatacgcttac 38282995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 35937684 - 35937778
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaatta 95  Q
    ||||||||||| |||||||||||||||||  |||||| ||| ||||| ||||  |||||||||||||| ||||||||   |||||||||||||||    
T  35937684 cttaaacaattcataattaatttgtatctcttttaaaaactccaaaacttcatggtgaaggttcttatgatgttctaactatgcctacaaaatta 35937778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 206
Target Start/End: Complemental strand, 3159382 - 3159310
Alignment:
Q  134 aacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaa 206  Q
    ||||||||||||||||||| | ||||||||||||||| | |||||||| ||||| |||| |||||| ||||||    
T  3159382 aacaaaatttcaattttgcacattttggttgaaaaataaaaataaattgaaacgtcttcaaaatgctatgaaa 3159310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 74
Target Start/End: Complemental strand, 38415512 - 38415440
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgtt 74  Q
    ||||| |||||||||||||||||| ||| ||||||| |||| ||| ||| || |||||||||||||| |||||    
T  38415512 ttaaataatttataattaatttgtctctagtttaaaaactaaaaatttttacggtgaaggttcttatgatgtt 38415440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 16094769 - 16094634
Alignment:
Q  91 aattagggaactaaatttgacttgtgagta-tacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgac 189  Q
    |||||||||||  ||||||||  ||||||| |||| || | |||||||||| | |||||| || | ||||||||||||||| | |||||||| ||||  |    
T  16094769 aattagggaacataatttgacccgtgagtaatacgattgctcataacaaaagtgcaatttcgcacattttggttgaaaaataaaaataaattgaaacttc 16094670  T
Q  190 ttcgaaatgccatgaaactttacatatcctttttat 225  Q
    || ||||||| |  ||||||| || |||||||||||    
T  16094669 tttgaaatgctacaaaactttgcagatcctttttat 16094634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 2 - 170
Target Start/End: Complemental strand, 219308 - 219144
Alignment:
Q  2 ttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaac 101  Q
    |||||||||| | ||||||||| | ||| |||||||  || |||||||| |  |||||| ||||| | ||||| ||  ||||||||||||||||| ||||    
T  219308 ttaaacaattcagaattaatttttgtctcgtttaaaatctccaaaatttaaaggtgaagtttcttgtgatgttataaccatgcctacaaaattagagaac 219209  T
Q  102 taaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
     |||||||||   ||||||| | ||  || ||  ||||||| |||||| || |||||||||||||||||    
T  219208 aaaatttgacccatgagtatgcact--cggat--caaaattgcaatttcgcacgttttggttgaaaaat 219144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 70
Target Start/End: Original strand, 8257290 - 8257359
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatca 70  Q
    ||||| ||||||||||||||||| | | | ||||||| |||  ||||||||| |||||||||||||||||    
T  8257290 cttaagcaatttataattaatttttctttcgtttaaaaactttaaaatttcattgtgaaggttcttatca 8257359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 55 - 181
Target Start/End: Original strand, 7468824 - 7468950
Alignment:
Q  55 gtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgc 154  Q
    ||||||||| |||| ||||||||   ||||||| |||||||| | || ||||||||   ||||||||| ||||||  | || ||||||  ||||||   |    
T  7468824 gtgaaggtttttattatgttctaactatgcctataaaattagaggacgaaatttgaaccgtgagtataagcttacttaaaataaaattgtaattttatcc 7468923  T
Q  155 gttttggttgaaaaatcataataaatt 181  Q
    |||||||||||||||| | ||||||||    
T  7468924 gttttggttgaaaaataaaaataaatt 7468950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 66
Target Start/End: Complemental strand, 19814831 - 19814766
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttctt 66  Q
    |||||| |||| |||||| ||| |||||| ||||||| ||| ||||||||||  ||||||||||||    
T  19814831 cttaaaaaattcataattgattcgtatctcgtttaaaaacttcaaaatttcatggtgaaggttctt 19814766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 18022 - 18247
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||| | |||||||   |||||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||||    
T  18022 cttaaacaatttataattaatttgtatatcgtttaaaatttacaaaatttcattgtgaaggtttcttatcatgttctagtcatgcttacaaaattaggga 18121  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||||||||    
T  18122 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgacttcgaaatgc 18221  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  18222 tatgaaactttacaaatcccttttat 18247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 154; Significance: 9e-82; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 154; E-Value: 9e-82
Query Start/End: Original strand, 1 - 225
Target Start/End: Complemental strand, 480160 - 479935
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggtt-cttatcatgttctagtcatgcctacaaaattaggga 99  Q
    ||||||||||||||||||||||||||||| |||||||   |||||||||||| |||||| ||| ||||||||||||||||||||||||||||||||||||    
T  480160 cttaaacaatttataattaatttgtatctcgtttaaaatttacaaaatttcattgtgaatgtttcttatcatgttctagtcatgcctacaaaattaggga 480061  T
Q  100 actaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgc 199  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||| |||||  |||||||||||| ||||||||||||||| ||||||||||    
T  480060 actaaatttgacttgtgagtatacgcttacgcggaacaaaatttcaattttgcacgtttcagttgaaaaatcaaaataaatttaaacgatttcgaaatgc 479961  T
Q  200 catgaaactttacatatcctttttat 225  Q
     ||||||||||||| |||| ||||||    
T  479960 tatgaaactttacaaatcccttttat 479935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0495 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0495
Description:

Target: scaffold0495; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 8483 - 8652
Alignment:
Q  1 cttaaacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaa 100  Q
    ||||||||||| |||||||||| ||||||  ||||||  || ||||||||||  ||||||||||||||  |||||||  |||||||| ||||||||  ||    
T  8483 cttaaacaattaataattaattcgtatctcatttaaaatcttcaaaatttcatggtgaaggttcttatgttgttctaaccatgcctagaaaattagaaaa 8582  T
Q  101 ctaaatttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaat 170  Q
    | |||||||||| |||| |||| | |||| || ||||||||| ||||||  | |||||||||||||||||    
T  8583 cgaaatttgactcgtgaatatatgtttactcagaacaaaattgcaatttcacacgttttggttgaaaaat 8652  T

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Target: scaffold0134 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 5 - 210
Target Start/End: Original strand, 17774 - 17977
Alignment:
Q  5 aacaatttataattaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaattagggaactaa 104  Q
    |||||||||||| |||||||| |||  |||||| ||  |||||||||| ||||||||||| ||| ||||||||  |||||||||||||||| ||||| |     
T  17774 aacaatttataagtaatttgtctctc-tttaaaaacagcaaaatttcattgtgaaggttcatattatgttctaaccatgcctacaaaattaaggaacgac 17872  T
Q  105 atttgacttgtgagtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatga 204  Q
    ||||||  | | |||||||  ||||    ||||||||||||||||||| || |||||||||||||| | || |||||  |||| ||||||||||  ||||    
T  17873 atttgatctattagtatacaattactaggaacaaaatttcaattttgcacg-tttggttgaaaaataaaaacaaattgcaacgtcttcgaaatgatatga 17971  T
Q  205 aacttt 210  Q
    ||||||    
T  17972 aacttt 17977  T

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Target: scaffold0015 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 2044 - 1937
Alignment:
Q  118 gtatacgcttacgcataacaaaatttcaattttgcgcgttttggttgaaaaatcataataaatttaaacgacttcgaaatgccatgaaactttacatatc 217  Q
    ||||| |||||| | |||||||||| ||||||||||| |||||||||||||| || |||||||| |   | ||||||||| | |||||| || |||||||    
T  2044 gtatatgcttactcttaacaaaattacaattttgcgcattttggttgaaaaaacaaaataaattgaggagtcttcgaaattctatgaaagttcacatatc 1945  T
Q  218 ctttttat 225  Q
    ||||||||    
T  1944 ctttttat 1937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 93
Target Start/End: Original strand, 35277 - 35354
Alignment:
Q  16 attaatttgtatcttgtttaaagactacaaaatttcactgtgaaggttcttatcatgttctagtcatgcctacaaaat 93  Q
    ||||||||| |||| ||||||| ||| ||||||||||  |||||||||||||| ||||||||  |||||||| |||||    
T  35277 attaatttgcatctcgtttaaaaactccaaaatttcatggtgaaggttcttataatgttctaaccatgcctataaaat 35354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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