View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8478_high_28 (Length: 247)

Name: NF8478_high_28
Description: NF8478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8478_high_28
NF8478_high_28
[»] chr3 (20 HSPs)
chr3 (92-229)||(22894710-22894849)
chr3 (69-229)||(34749898-34750059)
chr3 (70-229)||(36749436-36749596)
chr3 (69-229)||(44000019-44000180)
chr3 (69-229)||(51339784-51339942)
chr3 (69-229)||(21559591-21559752)
chr3 (69-229)||(36370338-36370499)
chr3 (69-229)||(48200715-48200876)
chr3 (69-230)||(46111944-46112106)
chr3 (69-229)||(30735496-30735656)
chr3 (69-229)||(38231323-38231483)
chr3 (69-230)||(39467102-39467263)
chr3 (97-229)||(20856182-20856312)
chr3 (69-169)||(29472901-29472999)
chr3 (165-229)||(29460690-29460756)
chr3 (165-229)||(29471542-29471608)
chr3 (147-230)||(39072350-39072435)
chr3 (157-229)||(50966160-50966234)
chr3 (157-229)||(51069295-51069369)
chr3 (127-229)||(53638165-53638269)
[»] chr5 (18 HSPs)
chr5 (69-229)||(13347158-13347319)
chr5 (69-230)||(2237305-2237467)
chr5 (69-229)||(39370957-39371118)
chr5 (85-230)||(9408054-9408201)
chr5 (69-229)||(14831574-14831735)
chr5 (69-229)||(40887942-40888103)
chr5 (69-230)||(1815620-1815778)
chr5 (69-222)||(31800595-31800748)
chr5 (83-229)||(27553387-27553534)
chr5 (69-190)||(42683670-42683790)
chr5 (157-229)||(33404523-33404597)
chr5 (119-221)||(17225355-17225459)
chr5 (91-222)||(4300565-4300697)
chr5 (69-229)||(19596068-19596228)
chr5 (69-229)||(41003851-41004010)
chr5 (130-211)||(19124532-19124612)
chr5 (82-211)||(12164301-12164433)
chr5 (167-204)||(37505927-37505964)
[»] chr4 (13 HSPs)
chr4 (69-229)||(3672304-3672465)
chr4 (69-229)||(6112660-6112820)
chr4 (69-229)||(28093096-28093257)
chr4 (69-229)||(7217795-7217956)
chr4 (69-229)||(21390956-21391116)
chr4 (69-211)||(44275756-44275896)
chr4 (69-229)||(49243845-49244005)
chr4 (70-228)||(35544943-35545102)
chr4 (69-229)||(46192389-46192550)
chr4 (69-230)||(45829258-45829419)
chr4 (69-211)||(51038813-51038955)
chr4 (25-67)||(3445684-3445726)
chr4 (130-204)||(54849845-54849919)
[»] scaffold0062 (1 HSPs)
scaffold0062 (69-229)||(6748-6909)
[»] chr7 (22 HSPs)
chr7 (69-229)||(26972203-26972364)
chr7 (69-229)||(36346565-36346725)
chr7 (69-230)||(34108455-34108617)
chr7 (69-229)||(28307495-28307656)
chr7 (69-229)||(7699883-7700044)
chr7 (69-229)||(7700081-7700242)
chr7 (69-229)||(7700279-7700440)
chr7 (69-229)||(7700477-7700638)
chr7 (70-229)||(30887730-30887890)
chr7 (69-229)||(45782660-45782821)
chr7 (69-229)||(34828095-34828255)
chr7 (69-229)||(31148320-31148480)
chr7 (69-229)||(5811164-5811324)
chr7 (69-229)||(42220964-42221124)
chr7 (69-229)||(13108178-13108337)
chr7 (70-229)||(21807324-21807483)
chr7 (69-167)||(29953572-29953669)
chr7 (125-229)||(23980161-23980267)
chr7 (117-229)||(15020312-15020423)
chr7 (64-210)||(46475075-46475220)
chr7 (69-229)||(36957459-36957618)
chr7 (132-224)||(20086690-20086784)
[»] chr1 (7 HSPs)
chr1 (70-229)||(39249864-39250024)
chr1 (69-230)||(2509053-2509215)
chr1 (69-229)||(34307138-34307299)
chr1 (69-230)||(46901735-46901897)
chr1 (70-229)||(19258674-19258833)
chr1 (69-229)||(28647383-28647543)
chr1 (138-211)||(29099866-29099939)
[»] chr8 (13 HSPs)
chr8 (69-229)||(42162628-42162789)
chr8 (83-229)||(44081810-44081958)
chr8 (69-211)||(31318855-31318996)
chr8 (69-230)||(10203693-10203855)
chr8 (83-229)||(30432369-30432516)
chr8 (69-221)||(43186065-43186217)
chr8 (69-229)||(12665374-12665536)
chr8 (59-229)||(36189246-36189415)
chr8 (69-230)||(18184582-18184743)
chr8 (69-229)||(33726041-33726202)
chr8 (126-229)||(42668838-42668942)
chr8 (170-229)||(31547-31608)
chr8 (67-216)||(38845021-38845168)
[»] chr2 (10 HSPs)
chr2 (69-229)||(16089852-16090011)
chr2 (69-229)||(33732599-33732759)
chr2 (69-229)||(44958143-44958304)
chr2 (71-230)||(3830900-3831057)
chr2 (69-229)||(37498863-37499026)
chr2 (91-225)||(14573029-14573165)
chr2 (64-229)||(36315591-36315757)
chr2 (69-229)||(37914237-37914397)
chr2 (127-211)||(24137149-24137233)
chr2 (69-229)||(6376239-6376394)
[»] chr6 (6 HSPs)
chr6 (69-229)||(3986906-3987066)
chr6 (64-221)||(15345655-15345810)
chr6 (69-229)||(3118047-3118208)
chr6 (69-229)||(14022964-14023124)
chr6 (69-230)||(13697598-13697758)
chr6 (69-211)||(24208494-24208634)
[»] scaffold0043 (1 HSPs)
scaffold0043 (69-229)||(87163-87324)


Alignment Details
Target: chr3 (Bit Score: 125; Significance: 2e-64; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 92 - 229
Target Start/End: Complemental strand, 22894849 - 22894710
Alignment:
Q  92 ttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttg 191  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  22894849 ttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgtttttg 22894750  T
Q  192 ccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||  ||||||||||||||||||||||    
T  22894749 ccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 22894710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 34749898 - 34750059
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    |||||||||||  |||||| | |||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34749898 gaaaaagatagc-cagacatcctttttcatacacttcttatgtacacccctatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 34749996  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  34749997 catctcttctttcaatgtttttgccacgtgtcacaaatatgtgtgggtgtaaaagggtgtatg 34750059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 70 - 229
Target Start/End: Complemental strand, 36749596 - 36749436
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 169  Q
    |||||||||||| ||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||    
T  36749596 aaaaagataggt-agacactctttttcatacactttttatgtacaccctcatgtattagaggtatttgagtaattttacatcatatcatcaccctttttc 36749498  T
Q  170 atctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  36749497 atctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaaaggtgtatg 36749436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 44000180 - 44000019
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||  |||||||||||||| |||||||| |||||||||||||| ||||||||||||||| ||||||||||||||| |||||||    
T  44000180 gaaaaagataggt-agacactctttttcatacactttttatgtacgccctcatgtattagaggtatttgagtaattttacatcatatcatcacccttttt 44000082  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||||| ||||||||    
T  44000081 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaaaggtgtatg 44000019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 51339784 - 51339942
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| ||||||||||||  |||||| |||| ||||||| ||||||| ||||||||||||||| |||||||    
T  51339784 gaaaaagataggt-agacaccctttttcatacacctcttatgtacaca-tcatgtgttagaggtattttagtaattttacatcatatcatcacccttttt 51339881  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||    
T  51339882 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgggtgtaaaaggatgtatg 51339942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 21559752 - 21559591
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||| | ||||||| |||||||||||| |||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||| | |||||||    
T  21559752 gaaaaagatagat-agacaccatttttcatacacctcttatgtacacccccatgtgttaggggtattttagtaattttacatcatatcattacccttttt 21559654  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||    
T  21559653 catctcttctttcaatatttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 21559591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 36370338 - 36370499
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||| ||  |||||||||||||| |||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  36370338 gaaaaagataggt-agatactctttttcatacactttttatatacaccctcatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 36370436  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||| ||| |||||||||  ||||||||||||||| ||||||||    
T  36370437 catctcttctttcaatgtttttgtcacatgtcacaaatgtgtgtgggtgtaaaaaggtgtatg 36370499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 48200876 - 48200715
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | |||||||||||||| |||||||||||| ||||||||| |||||||||||||||| |||||||||||||||||||||||    
T  48200876 gaaaaagataggt-agacatcctttttcatacactttttatgtacacccccatgtattatgggtatttgagtaattttacatcatatcatcatccttttt 48200778  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||  ||||||||||||||||||  || ||||| ||||||| ||||||||    
T  48200777 catctcttctttcaatatttttgccacgtgtcacaaatatatgtggatgtaaaaaggtgtatg 48200715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 46111944 - 46112106
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| | |||| |||| || |||||||||||||||||| ||||||| ||||||||||||||| |||||||    
T  46111944 gaaaaagataggt-agacaccatttttcatacaccttttatatacatccccatgtattaggggtattttagtaattttacatcatatcatcacccttttt 46112042  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||| ||||||||| |||||||||  ||||||| ||||||| |||||||||    
T  46112043 catctcttctttcaatgtttttgccacatgtcacaaatgtgtgtggatgtaaaatggtgtatgt 46112106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 30735496 - 30735656
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttg-agtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||||| ||||||||||||  ||||||||||| | ||||| ||||||||||||  |||||||  |||||||||||||| ||||||    
T  30735496 gaaaaagataggt-agacaccctttttcatacaccacttatgtacactc-catgtgttaggggtatttttagtaatttaacatcatatcatcaccctttt 30735593  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    | || ||||||||||||| ||||||||||||||||| |  ||||||||||||||||||||||||    
T  30735594 t-atatcttctttcaatgtttttgccacgtgtcacagatgtgtgtgggtgtaaaagggtgtatg 30735656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 38231483 - 38231323
Alignment:
Q  69 gaaaaagataggtcagaca-ccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||| |||||||| |||||| |||||||||||||| ||||| | ||||||| || ||| |||  |||| | || || | || |||    
T  38231483 gaaaaagataggt-agacatccttttttgatacacctcttatgtacaccc-catgtgtcaggggtagtttagtcatttcacattacattatta-ccattt 38231387  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    |||| ||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  38231386 tcatatcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 38231323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 39467102 - 39467263
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| ||||| |||||| ||  ||||||||| |||||| ||| || ||||| |||||||  | |||| ||| ||| || ||||    
T  39467102 gaaaaagataggt-acacacccttttttatacacctcccatgtacacc-tcatgtgttatggatattttagtaatttcatatcacatcctcacccctttt 39467199  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||  ||||| ||| ||||||||  ||||||||||||||||||||||||||    
T  39467200 catctcttctttcaatatttttggcacatgtcacaaatatgtgtgggtgtaaaagggtgtatgt 39467263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 97 - 229
Target Start/End: Original strand, 20856182 - 20856312
Alignment:
Q  97 atacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacg 196  Q
    |||||| ||| |||||||||| ||||| | |||||||||| ||||||| || |||| ||||||||||||||| || |||| |||||||| |||||||||     
T  20856182 atacacctctcatgtacaccc-catgtgtcaggggtattt-agtaattttatatcacatcatcatccttttt-atatctt-tttcaatgtttttgccaca 20856277  T
Q  197 tgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    |||||||||||||  ||||||||||||||||||||    
T  20856278 tgtcacaaatgtgtatgggtgtaaaagggtgtatg 20856312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 169
Target Start/End: Complemental strand, 29472999 - 29472901
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||||  |||||| |||||| ||||| |||||||||||| ||||||| |||||||||||||||||| ||||    
T  29472999 gaaaaagataggt-agacatcctttttcatacaccacttatgcacaccc-catgtgttaggggtattttagtaattttacatcatatcatcatccctttt 29472902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 29460756 - 29460690
Alignment:
Q  165 ttttcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||    
T  29460756 ttttcatctcttctttcaatgtttttgccacatgtcacaaaagtgtgtgggtgtaaaagggtgtatg 29460690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 165 - 229
Target Start/End: Complemental strand, 29471608 - 29471542
Alignment:
Q  165 ttttcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||||| ||||||||| |||||||||  ||||||||||||||||||||||||    
T  29471608 ttttcatctcttctttcaatgtttttgccacatgtcacaaaagtgtgtgggtgtaaaagggtgtatg 29471542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 147 - 230
Target Start/End: Original strand, 39072350 - 39072435
Alignment:
Q  147 acatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatgt 230  Q
    |||||| ||||||| || |||||||||||||||| |||| || |||||| |||||||||||  |||||||||||||||||||||||    
T  39072350 acatcacatcatcacccattttcatctcttcttttaatgtttatgccacatgtcacaaatgtatgtgggtgtaaaagggtgtatgt 39072435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 50966234 - 50966160
Alignment:
Q  157 atcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||  | | ||||||||||||||||    
T  50966234 atcatcctttttcatctcttctttcaatatttttgtcacgtgtcacaaatgtgaatagatgtaaaagggtgtatg 50966160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 229
Target Start/End: Complemental strand, 51069369 - 51069295
Alignment:
Q  157 atcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||||||||||||  ||||| |||||||||||||||||  | | ||||||||||||||||    
T  51069369 atcatcctttttcatctcttctttcaatatttttgtcacgtgtcacaaatgtgaatagatgtaaaagggtgtatg 51069295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 53638269 - 53638165
Alignment:
Q  127 aggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggt 224  Q
    |||||||||| || |||| ||||||| ||||||| ||  | |||||||||||||| ||| |||| |||| |||||| |   ||||||||||| |||||||    
T  53638269 aggggtattttagcaattttacatcacatcatcaccccctctcatctcttctttccatgtttttaccacatgtcacgattgtgtgtgggtgttaaagggt 53638170  T
Q  225 gtatg 229  Q
    |||||    
T  53638169 gtatg 53638165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 124; Significance: 7e-64; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 13347319 - 13347158
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||    
T  13347319 gaaaaagataggt-agacaccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcactcttttt 13347221  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||| ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  13347220 catctattctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 13347158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 2237467 - 2237305
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| || ||||||||||||||||||||||| ||||||||||||||| |||||||    
T  2237467 gaaaaagataggt-agacaccctttttcatacacttcttatgtacacccccaagtattaggggtatttgagtaattttacatcatatcatcacccttttt 2237369  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||| ||||||||||||||||||  ||||||||||||||||||||||||||    
T  2237368 catctcttctttcaatgtttttgccacgtgtcacaaatatgtgtgggtgtaaaagggtgtatgt 2237305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 39371118 - 39370957
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  39371118 gaaaaagataggt-agacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 39371020  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||    
T  39371019 catctcttctttcaatgtttttggcacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 39370957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 85 - 230
Target Start/End: Original strand, 9408054 - 9408201
Alignment:
Q  85 acaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaat 184  Q
    ||||| ||||||||||||||||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||    
T  9408054 acaccatttttcatacacttcttatgtacacccccatatattaggggtatttgagtaattttacatcatatcatcaccctttttcatctcttctttcaat 9408153  T
Q  185 gattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatgt 230  Q
    | |||||||||||||||||||  |||||| ||||||||||| ||||||    
T  9408154 gtttttgccacgtgtcacaaatgtgtgtgagtgtaaaagggcgtatgt 9408201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 14831735 - 14831574
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||||||||||||||||||  | ||||||||||||||||| ||||| ||||||||||||||| |||||||    
T  14831735 gaaaaagataggtaa-acaccctttttcatacacttcttatgtacacccctacgtattaggggtatttgaataattttacatcatatcatcacccttttt 14831637  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||||| |||||||||  ||||||||||||||||||||||    
T  14831636 catctcttctttcaatgtttttgccacgtatcacaaatgtgtgtgggtgtaaaagggtgtatg 14831574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 40887942 - 40888103
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||| ||||||| ||||||| |||||||||||| || |||||||    
T  40887942 gaaaaagataggt-agacaccctttttcatacacctcttatgtacacccccatctattagaggtattttagtaattttacatcatatcaccacccttttt 40888040  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||    
T  40888041 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagagtgtatg 40888103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 1815620 - 1815778
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||||||||||||| |      ||||||||||| |||| |||||||||||| ||||||| ||||||||||||||| || ||||    
T  1815620 gaaaaagataggt-agacaccttttttcataaagaa---atgtacaccct-atgtgttaggggtattttagtaattttacatcatatcatcacccctttt 1815714  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||||||||||    
T  1815715 catctcttctttcaatgtttttgccacgtgtcacaaatatgtgtggatgtaaaagggtgtatgt 1815778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 222
Target Start/End: Complemental strand, 31800748 - 31800595
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    |||||||||||| |||||||| |||||||||||| |||| ||||||||| ||| | |||||||||||| ||||||| ||||||||||||||| || ||||    
T  31800748 gaaaaagatagg-cagacaccctttttcatacacctcttgtgtacaccc-catatgttaggggtattttagtaattttacatcatatcatcacccctttt 31800651  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagg 222  Q
    ||||| ||||||||||  ||||||||||||||| |||  |||||||||||||||||    
T  31800650 catcttttctttcaatatttttgccacgtgtcataaatgtgtgtgggtgtaaaagg 31800595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 83 - 229
Target Start/End: Original strand, 27553387 - 27553534
Alignment:
Q  83 agacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttca 182  Q
    ||||||| |||||||||||| ||||||||||||||| |||| ||||| |||||| ||||||| ||||||| || |||| | |||||| ||||||||||||    
T  27553387 agacaccctttttcatacacctcttatgtacaccct-atgtgttaggagtattttagtaattttacatcagataatcaccatttttcttctcttctttca 27553485  T
Q  183 atgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||| |||||||||||||||||||  ||||||||||||||| ||| ||||    
T  27553486 atgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaatggtatatg 27553534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 69 - 190
Target Start/End: Complemental strand, 42683790 - 42683670
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||| | ||||| | |||||||||||| |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||| ||||||||||    
T  42683790 gaaaaagatagat-agacatcctttttcatacacctcttatgtacacccccatatattaggggtattttagtaattttacatcatatcaccatccttttt 42683692  T
Q  169 catctcttctttcaatgatttt 190  Q
    ||||||||||||||||| ||||    
T  42683691 catctcttctttcaatgttttt 42683670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 229
Target Start/End: Original strand, 33404523 - 33404597
Alignment:
Q  157 atcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||||  |||||||||||||||| |||||||    
T  33404523 atcattctttttcatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagtgtgtatg 33404597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 119 - 221
Target Start/End: Complemental strand, 17225459 - 17225355
Alignment:
Q  119 catgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgt 216  Q
    ||||||| |||||||||| |||||||  |||||| ||||||| |  ||||||||||||||||||||| ||||| ||| |||||||||||  |||||||||    
T  17225459 catgtatcaggggtattttagtaatttcacatcacatcatcacctcttttcatctcttctttcaatgtttttgtcacatgtcacaaatgtgtgtgggtgt 17225360  T
Q  217 aaaag 221  Q
    |||||    
T  17225359 aaaag 17225355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 91 - 222
Target Start/End: Original strand, 4300565 - 4300697
Alignment:
Q  91 tttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgatttt 190  Q
    ||||| |||||  ||| ||||||||| |||||| |||||| ||||| | |||||  |||||| |||| || | ||||| ||||||| |||||||| ||||    
T  4300565 ttttttatacatctctcatgtacacc-tcatgtgttagggatattttaataatttcacatcacatcaccaccattttttatctcttatttcaatgttttt 4300663  T
Q  191 gccacgtgtcacaaat--gtgtgggtgtaaaagg 222  Q
    ||||  ||||||||||  ||||||||||||||||    
T  4300664 gccatatgtcacaaatatgtgtgggtgtaaaagg 4300697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 19596068 - 19596228
Alignment:
Q  69 gaaaaagataggtcagaca-ccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||| |||||||| | | || |||||||||||||| ||||| | ||||||| || ||| |||  |||| | || |||| |  |||    
T  19596068 gaaaaagataggt-agacatccttttttgaaatacctcttatgtacaccc-catgtgtcaggggtagtttagtcatttcacattacattatca-ctattt 19596164  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatgt--gtgggtgtaaaagggtgtatg 229  Q
    ||| |||||||||||||| ||||||||| ||||||||||||  |||| ||||||| ||||||||    
T  19596165 tcacctcttctttcaatgtttttgccacatgtcacaaatgtgcgtggatgtaaaaaggtgtatg 19596228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 41003851 - 41004010
Alignment:
Q  69 gaaaaagataggtcagacaccttttt-tcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    |||||||||||  |||| |||||||| | |||||| ||| |||||||||| ||| | | |||| ||||| ||||||| ||||||| |||||||||| |||    
T  41003851 gaaaaagataga-cagaaacctttttgttatacacctctcatgtacaccc-catatgtcagggatattt-agtaattttacatcacatcatcatcccttt 41003947  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatgtgt--gggtgtaaaagggtgtatg 229  Q
    | || |||| |||||||  ||||||||| ||||| ||||||||  | |||||||||||||||||    
T  41003948 ttatatctt-tttcaatatttttgccacatgtcataaatgtgtatgagtgtaaaagggtgtatg 41004010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 19124532 - 19124612
Alignment:
Q  130 ggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    ||||||| ||||||| |||||||||||||||   | ||||||||||||||| |||| |||||||||  ||||||| ||||||    
T  19124532 ggtattttagtaattttacatcatatcatcacattctttcatctcttcttt-aatgtttttgccacacgtcacaattgtgtg 19124612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 82 - 211
Target Start/End: Complemental strand, 12164433 - 12164301
Alignment:
Q  82 cagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctct---tct 178  Q
    |||||||| ||||| || ||| |||||||||||||  ||||||  ||||| |||| |||||||  |||||| | ||||| ||| |  |||||||   |||    
T  12164433 cagacacccttttttatgcacctcttatgtacacctccatgtagcaggggcattttagtaatttcacatcacaccatcaccctctcccatctcttcttct 12164334  T
Q  179 ttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    ||||||| ||||||||| || ||||| ||||||    
T  12164333 ttcaatgtttttgccacatgccacaactgtgtg 12164301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 167 - 204
Target Start/End: Complemental strand, 37505964 - 37505927
Alignment:
Q  167 ttcatctcttctttcaatgattttgccacgtgtcacaa 204  Q
    ||||| ||||||||||||||||||||||| ||||||||    
T  37505964 ttcatatcttctttcaatgattttgccacatgtcacaa 37505927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 124; Significance: 7e-64; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 3672465 - 3672304
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  3672465 gaaaaagataggt-agataccctttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcacccttttt 3672367  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||||||||||    
T  3672366 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtggatgtaaaagggtgtatg 3672304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 6112820 - 6112660
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||  ||||||||||||||||||||||||| | |||||||||||||||||||||||||| |||||||||||||||||||||||    
T  6112820 gaaaaagataggt-agacactctttttcatacacttcttatgtacactc-catgtattaggggtatttgagtaattttacatcatatcatcatccttttt 6112723  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||||||||||||  |||||||||||||||| ||||||||    
T  6112722 catctcttctttcaatgtttttgccacgtgtcacaaatatgtgtgggtgtaaaatggtgtatg 6112660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 28093096 - 28093257
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||||| |||||||    
T  28093096 gaaaaagataggt-agacatcctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtatttttacatcatatcatcacccttttt 28093194  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||| ||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  28093195 catctctcctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 28093257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 7217956 - 7217795
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||| |||||||||||||||||||| |||  ||||||| ||||||| ||||||||||||||| |||||||    
T  7217956 gaaaaagataggtaa-acaccctttttcatacacctcttatgtacaccctcatgtgttataggtattttagtaattttacatcatatcatcacccttttt 7217858  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtg--ggtgtaaaagggtgtatg 229  Q
     ||||||| ||| |||| |||||||||||||||||||||||||  ||||| ||||||||||||    
T  7217857 tatctcttattttaatgtttttgccacgtgtcacaaatgtgtgtaggtgttaaagggtgtatg 7217795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 21390956 - 21391116
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||| |||||| |||||||||||| ||||||| ||||||||||  |||  | ||||    
T  21390956 gaaaaagataggt-agacaccctttttcatacaccttttatgtacacc-tcatgtgttaggggtattttagtaattttacatcatatattcactcatttt 21391053  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||  |||||||||||||||||||  ||||||||||||||||||||||||    
T  21391054 catctcttctttcaatatttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 21391116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 44275896 - 44275756
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||| | ||||||| |||||||||||| |||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||| |||||||    
T  44275896 gaaaaagatagat-agacaccctttttcatacacctcttatgtacaccc-catgtgttaggggtattttagtaattttacatcatatcatcacccttttt 44275799  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
     |||||||||||||||  ||||| |||||||||||||||||||    
T  44275798 aatctcttctttcaatatttttggcacgtgtcacaaatgtgtg 44275756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 49244005 - 49243845
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    |||||||||| || ||||| | |||||||||||| |||||||||||| | |||||||||||||||||| ||||||| |||||||||||||||   |||||    
T  49244005 gaaaaagatatgt-agacatcctttttcatacacctcttatgtacactc-catgtattaggggtattttagtaattttacatcatatcatcacttttttt 49243908  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| ||||||||| |||||||||||  ||||| ||||||||||||||||    
T  49243907 tatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtggatgtaaaagggtgtatg 49243845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 70 - 228
Target Start/End: Complemental strand, 35545102 - 35544943
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttg-agtaattatacatcatatcatcatccttttt 168  Q
    |||||||||||| ||||||| ||||||||||||  ||||||||||| | ||||| ||||||||||||  ||||||| ||||||||||||||| || ||||    
T  35545102 aaaaagataggt-agacaccctttttcatacaccacttatgtacactc-catgtgttaggggtatttttagtaattttacatcatatcatcacccctttt 35545005  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtat 228  Q
     || ||||||||||||| ||||||||||| |||||||||  ||||| ||||||| |||||||    
T  35545004 tatatcttctttcaatgtttttgccacgtatcacaaatgtatgtggatgtaaaatggtgtat 35544943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 46192550 - 46192389
Alignment:
Q  69 gaaaaagataggtcagacacc-ttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||||||||| ||||||  |||||||||| | | |||  |||||| || |||| || |||    
T  46192550 gaaaaagataggt-agacacccttttttgatacacctcttatgtacaccc-catgtaccaggggtattttaatcatttcacatcacattatcaccccttt 46192453  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    | |||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  46192452 ttatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 46192389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 45829258 - 45829419
Alignment:
Q  69 gaaaaagataggtcagacacc-ttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||||| |||||| |||||| | |||||||||||| ||| |   |||||||||| | | |||  |||||| || |||| || |||    
T  45829258 gaaaaagataggt-agacacccttttttgatacacct-ttatgtacaccc-catatgccaggggtattttaatcatttcacatcacattatcaccccttt 45829354  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatgt 230  Q
    | |||||||||||||||| ||||||||| |||||||||  ||||||||||||||| |||||||||    
T  45829355 ttatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaaaggtgtatgt 45829419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 51038955 - 51038813
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcct-ttt 167  Q
    |||||||||||| |||||||||||||||||  || ||| ||||||||||  ||||   || | ||||| |||||||  |||||| | ||||| ||  |||    
T  51038955 gaaaaagatagg-cagacaccttttttcatgtacatctcatgtacacccctatgtggcagagatattttagtaatttcacatcacaccatcacccccttt 51038857  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    |||||||||||||||||| ||||| ||| |||||||| ||||||    
T  51038856 tcatctcttctttcaatgtttttgtcacatgtcacaattgtgtg 51038813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 25 - 67
Target Start/End: Original strand, 3445684 - 3445726
Alignment:
Q  25 tactctttgattagaatgcttaattccttttattatttttata 67  Q
    ||||| ||||||||||||||||||||||||||||| |||||||    
T  3445684 tactcattgattagaatgcttaattccttttattaattttata 3445726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 204
Target Start/End: Complemental strand, 54849919 - 54849845
Alignment:
Q  130 ggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaa 204  Q
    ||||||| | |||||  |||||| ||||||||||| | |||||||||||||||||  ||||| ||| ||||||||    
T  54849919 ggtattttaataatttcacatcacatcatcatcctctctcatctcttctttcaatatttttgtcacttgtcacaa 54849845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0062 (Bit Score: 120; Significance: 2e-61; HSPs: 1)
Name: scaffold0062
Description:

Target: scaffold0062; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 6909 - 6748
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||||||||| |||||||    
T  6909 gaaaaagataggt-agataccttttttcatacacttcttatgtacaccctcatgtattagggatatttaagtaattttacatcatatcatcacccttttt 6811  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  6810 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 6748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 116; Significance: 4e-59; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 26972203 - 26972364
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  26972203 gaaaaagataggt-agacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 26972301  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||| ||||||||| ||||||||||||||| |||  ||||||||||||||||||||||||    
T  26972302 catctctcctttcaatgtttttgccacgtgtcataaatgtgtgtgggtgtaaaagggtgtatg 26972364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 36346565 - 36346725
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||    
T  36346565 gaaaaagataggt-agacaccctttttcatacacctcttatgtacaccctcatgtgttaggggtattttagtaattttacatcatatcatca-ccttttt 36346662  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  36346663 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtctgggtgtaaaagggtgtatg 36346725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 34108617 - 34108455
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| ||||||||||||||||||||||||| | |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  34108617 gaaaaagataggtaa-acaccctttttcatacacttcttatgtacactcccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 34108519  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||| ||||||| ||||| ||  ||||||||  ||||||||||||||||||||||||||    
T  34108518 catctcttcattcaatgtttttgtcatatgtcacaaatatgtgtgggtgtaaaagggtgtatgt 34108455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 28307495 - 28307656
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| |||||||||||||| |||||||||||||| ||| | ||| |||||||| ||||||| ||||||||||||||| |||||||    
T  28307495 gaaaaagataggt-agacatcttttttcatacacctcttatgtacacccccatatgttaagggtattttagtaattttacatcatatcatcacccttttt 28307593  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||| ||||  ||||||||||||||||||||||||    
T  28307594 catctcttctttcaatgtttttgccacgtgtcgcaaatgtgtgtgggtgtaaaagggtgtatg 28307656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 7699883 - 7700044
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||| |||||| |||||| |||||| ||| |||||||| ||||||| || ||||||||||||||||||||    
T  7699883 gaaaaagataggtaa-acaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatccttttt 7699981  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  7699982 tatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 7700044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 7700081 - 7700242
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||| |||||| |||||| |||||| ||| |||||||| ||||||| || ||||||||||||||||||||    
T  7700081 gaaaaagataggtaa-acaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatccttttt 7700179  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  7700180 tatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 7700242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 7700279 - 7700440
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||| |||||| |||||| |||||| ||| |||||||| ||||||| || ||||||||||||||||||||    
T  7700279 gaaaaagataggtaa-acaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatccttttt 7700377  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  7700378 tatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 7700440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 7700477 - 7700638
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| | ||||| |||||||||||| |||||| |||||| |||||| ||| |||||||| ||||||| || ||||||||||||||||||||    
T  7700477 gaaaaagataggtaa-acaccctttttcatacacctcttatatacaccttcatgtgttatgggtattttagtaattttatatcatatcatcatccttttt 7700575  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  7700576 tatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 7700638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 70 - 229
Target Start/End: Complemental strand, 30887890 - 30887730
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 169  Q
    ||||||||| || ||||||| ||||||||||||||||||| ||||||| |||||||||| ||||||| ||||||| ||||||||||||||| ||||||||    
T  30887890 aaaaagatacgtaagacaccctttttcatacacttcttatatacaccc-catgtattagaggtatttaagtaattttacatcatatcatcaccctttttc 30887792  T
Q  170 atctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    |||||||| ||||||| |||||| ||||||||||||||  |||||||||||||| |||||||    
T  30887791 atctcttcattcaatgtttttgctacgtgtcacaaatgtatgtgggtgtaaaagtgtgtatg 30887730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 45782660 - 45782821
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||| |||||||| |||||||||| | ||||| |||||||||||| ||||||| ||||||||||||||| |||||||    
T  45782660 gaaaaagataggt-agacacccttttttatacactttttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 45782758  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||| |||||||||||||  ||||||||||||||| | ||||||    
T  45782759 catctcttctttcaatgtttttgtcacgtgtcacaaatgtgtgtgggtgtaaaatgatgtatg 45782821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 34828255 - 34828095
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||||  |||||| |||||| ||| | |||||||||||| ||||||| |||||||||||||||||  ||||    
T  34828255 gaaaaagataggt-agacatcctttttcatacaccacttatgcacaccc-catatgttaggggtattttagtaattttacatcatatcatcatcactttt 34828158  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||| ||||||||| ||||||    
T  34828157 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtggatgtaaaaggatgtatg 34828095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 31148480 - 31148320
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||  |||||||||||| ||||||  |||||| ||| | |||||  ||||| ||||||| ||||||||||||||| || ||||    
T  31148480 gaaaaagataggt-agacactctttttcatacacctcttatacacaccc-catatgttaggcttattttagtaattttacatcatatcatcacccatttt 31148383  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||| ||||||||||||  ||||||||||||||||||||||    
T  31148382 catctcttctttcaatgtttttgccatgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 31148320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 5811164 - 5811324
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||| |||||| ||  ||||||||| |||||| |||||||||||| |||||||  |||||| ||| ||| || ||||    
T  5811164 gaaaaagataggt-agacacccttttttatacacctcccatgtacacc-tcatgtgttaggggtattttagtaatttcacatcacatcctcacccctttt 5811261  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||||| |||||| ||||||    
T  5811262 catctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgaaaaaggatgtatg 5811324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 42220964 - 42221124
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttg-agtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| |||||||||||| |||||||  ||||||||||| | ||||| ||||||||||||  |||||||  |||||||||||||| || |||    
T  42220964 gaaaaagataggt-agacaccttttt-catacaccacttatgtacactc-catgtgttaggggtatttttagtaatttaacatcatatcatcaccccttt 42221060  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    | || ||||||||||||| |||||||||||||||||||  |||||||||||||||  |||||||    
T  42221061 ttatatcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaaaagtgtatg 42221124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 13108337 - 13108178
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||| |||||| | | ||||||||| |||||| |||||||||||| |||||||  |||||| ||| ||| || |||     
T  13108337 gaaaaagataggt-agacacccttttttatacacctttcatgtacacc-tcatgtgttaggggtattttagtaatttcacatcacatcctcaccccttt- 13108241  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||| | ||||||||| |||||||||||  ||||||||||||||||||||||    
T  13108240 catctcttctttcaacgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 13108178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 21807324 - 21807483
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 169  Q
    ||||||||||||  |||| | ||||| |||||||||| || ||||||| || || |||||||||||| |||||||  |||| | |||||||||| |||||    
T  21807324 aaaaagataggtt-gacaaccttttttatacacttctcatatacaccc-cacgtgttaggggtattttagtaatttcacataacatcatcatccattttc 21807421  T
Q  170 atctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||  ||||||||| | |||||||  ||||||||||||||| ||||||||    
T  21807422 atctcttctttcaatatttttgccacatatcacaaatttgtgtgggtgtaaaatggtgtatg 21807483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 69 - 167
Target Start/End: Original strand, 29953572 - 29953669
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||||| |||||||||||||||||||||| ||   |||||||||||| ||||||||||||| ||||||||||||||| ||||||    
T  29953572 gaaaaagataggt-agacaccctttttcatacacttcttatgtagacttccatgtattagggatatttgagtaattttacatcatatcatcaccctttt 29953669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 125 - 229
Target Start/End: Complemental strand, 23980267 - 23980161
Alignment:
Q  125 ttaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagg 222  Q
    |||| ||||||| |||||||  |||||| ||| ||| || ||||||||||||||||||||| ||||||||| |||||||||||  |||||||||||||||    
T  23980267 ttagaggtattttagtaatttcacatcacatcctcaccccttttcatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagg 23980168  T
Q  223 gtgtatg 229  Q
    |||||||    
T  23980167 gtgtatg 23980161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 117 - 229
Target Start/End: Complemental strand, 15020423 - 15020312
Alignment:
Q  117 ctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtgggtgt 216  Q
    ||||||| |||||| ||||| |||||||  |||||||||| ||| || ||| | ||||||||||||||| ||||||||  ||||||||||||||||||||    
T  15020423 ctcatgtgttagggatattttagtaatttcacatcatatcttcaccccttt-cgtctcttctttcaatgtttttgccatatgtcacaaatgtgtgggtgt 15020325  T
Q  217 aaaagggtgtatg 229  Q
    |||||| ||||||    
T  15020324 aaaaggttgtatg 15020312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 64 - 210
Target Start/End: Complemental strand, 46475220 - 46475075
Alignment:
Q  64 tatacgaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtatta-ggggtatttgagtaattatacatcatatcatcatc 162  Q
    |||| ||||||||||||| ||||||| ||||| |||||| ||| ||||||| | |||||| ||| ||||||||| |||||||  |||||| ||| ||| |    
T  46475220 tataggaaaaagataggt-agacacccttttttatacacctctcatgtacatc-tcatgtgttatggggtattttagtaatttcacatcacatcgtcacc 46475123  T
Q  163 ctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgt 210  Q
    | ||||||||||||||||||||| |||||  || ||||||||||||||    
T  46475122 ccttttcatctcttctttcaatgtttttgttacatgtcacaaatgtgt 46475075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 36957618 - 36957459
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||  ||||| |||||| | | || |||||||  |||| || ||||||||| ||||||| ||||| | || ||||||| ||||    
T  36957618 gaaaaagataggt-agacacaattttttatacacctttcatatacaccc--atgtgttgggggtattttagtaattttacattacattatcatccatttt 36957522  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||| ||||  ||||| ||||||||||||  |||| ||| ||||||||||||||||    
T  36957521 catctcttcttacaatatttttgtcacgtgtcacaaatatgtatggatgtaaaagggtgtatg 36957459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 132 - 224
Target Start/End: Original strand, 20086690 - 20086784
Alignment:
Q  132 tatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggt 224  Q
    ||||| |||||||  |||||| ||||||| || |||| ||||||||||| |||| ||||||||  |||| ||||||  |||||||||||||||||    
T  20086690 tattttagtaatttcacatcacatcatcacccctttttatctcttcttttaatgtttttgccagatgtctcaaatgtatgtgggtgtaaaagggt 20086784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 115; Significance: 2e-58; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 39249864 - 39250024
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 169  Q
    |||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||||||| ||||||| ||||| |||||| |||||||||||    
T  39249864 aaaaagataggt-agacaccttttttcatacacctcttatgtacacccccatgtattaggggtattttagtaattttacattatatcaccatcctttttc 39249962  T
Q  170 atctcttctttcaatgattttgccacgtgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  39249963 atctcttctttcaatgtttttgccacgtgtcacaaatgtgtatgggtgtaaaagggtgtatg 39250024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 2509215 - 2509053
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||| |||||||||||| || |||||||    
T  2509215 gaaaaagataggt-agacactttttttcatacacctcttatgtacaccctcatgtattagggatattttagtaattttacatcatatcaccacccttttt 2509117  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| |||||||    
T  2509116 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaaggatgtatgt 2509053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 34307138 - 34307299
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||| | ||||| |||||||||||| ||||||| ||||||||||||||| |||||||    
T  34307138 gaaaaagataggt-agacaccttttttcatacacctcttatgtacactcccatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 34307236  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||| ||||||||||||| |||||||||||||||||||  ||||||| ||||||||||||||||    
T  34307237 catatcttctttcaatgtttttgccacgtgtcacaaatgtgtgtggatgtaaaagggtgtatg 34307299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 69 - 230
Target Start/End: Original strand, 46901735 - 46901897
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||| ||||||||||||||  ||||||| ||| |||||||||||||| ||||||||||||||| |||||||    
T  46901735 gaaaaagataggt-agacatcctttttcatacatttcttatgtacaccgccatgtatcaggagtatttgagtaattttacatcatatcatcacccttttt 46901833  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    |||||||||||| |||| ||||||||||||||||||  |||||| ||||||||| |||||||||    
T  46901834 catctcttcttttaatgtttttgccacgtgtcacaaatatgtgttggtgtaaaatggtgtatgt 46901897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 70 - 229
Target Start/End: Original strand, 19258674 - 19258833
Alignment:
Q  70 aaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttc 169  Q
    |||||||||||| ||||||| ||||| |||||  ||| |||||||||| ||||| |||||  ||||| | |||||  |||||| |||| || || |||||    
T  19258674 aaaaagataggt-agacacccttttttatacatctctcatgtacaccc-catgtgttaggaatattttaataatttcacatcacatcaccaccccttttc 19258771  T
Q  170 atctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||| |||||||| ||||||||| ||||||||  || ||||||||||||| ||||||||    
T  19258772 atctcttttttcaatgtttttgccacatgtcacaaatatatgtgggtgtaaaaaggtgtatg 19258833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 28647543 - 28647383
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||| |||||  ||| ||||||| || ||||| |||||  ||||| | |||||  |||||| |||| || || ||||    
T  28647543 gaaaaagataggt-agacacccttttttatacatctctcatgtacatcc-catgtgttaggaatattttaataatttcacatcacatcaccacccctttt 28647446  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatg 229  Q
    ||||| ||||||||||| ||||||||  | ||||||  |||||||||||||||| | ||||||    
T  28647445 catctattctttcaatgtttttgccaaatatcacaaatatgtgtgggtgtaaaaagatgtatg 28647383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 211
Target Start/End: Complemental strand, 29099939 - 29099866
Alignment:
Q  138 agtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    |||||||  |||||| ||||||| || |||| || |||| |||||||| ||||| ||| |||||||||||||||    
T  29099939 agtaatttcacatcacatcatcaccccttttaatttcttttttcaatgtttttgtcacatgtcacaaatgtgtg 29099866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 112; Significance: 1e-56; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 42162789 - 42162628
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||  |||||||||||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||    
T  42162789 gaaaaagataggt-agacactctttttcatacactttttatgtacacccccatgtattaggggtatttgagtaattttacatcatatcatcacccttttt 42162691  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtg--tgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||| |||||||||||||||||  ||||||||||||||||||||    
T  42162690 catctcttctttcaatgtttttgtcacgtgtcacaaatgtgtttgggtgtaaaagggtgtatg 42162628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 44081958 - 44081810
Alignment:
Q  83 agacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttca 182  Q
    ||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||    
T  44081958 agacaccctttttcatacacttcttatgtacacccccatgtattaggggtatttgagtaattttacattatatcatcaccctttttcatctcttctttca 44081859  T
Q  183 atgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||| |||| |||||||| |||||||  ||||||||||||||||||||||    
T  44081858 atgttttttccacgtgttacaaatgtgtgtgggtgtaaaagggtgtatg 44081810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 31318996 - 31318855
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||||||||||| ||||||| ||||||||||| |||||||||||||| ||||||||||||||| |||||||    
T  31318996 gaaaaagataggt-agacatcatttttcatacacttcttatatacacccccatgtattaggagtatttgagtaattttacatcatatcatcacccttttt 31318898  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    ||||||||||||||||| |||||||||||||||||||||||||    
T  31318897 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtg 31318855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 10203855 - 10203693
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||  ||||||||||||||||||||||||||| ||||| ||||||| || ||||||||| || |||||||    
T  10203855 gaaaaagataggt-agacaccctttttcatacatctcttatgtacaccctcatgtattagggatattttagtaattttatatcatatcaccacccttttt 10203757  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||  ||||| |||||||||||||||  ||||| ||||||||| |||||||    
T  10203756 catctcttctttcaatatttttgtcacgtgtcacaaatgtgtgtggatgtaaaaggatgtatgt 10203693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 83 - 229
Target Start/End: Complemental strand, 30432516 - 30432369
Alignment:
Q  83 agacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttca 182  Q
    ||||||| |||||||||||| ||||||||||| || ||| ||||| |||||||| ||||||| ||||||||||||||| || ||||||||||||||||||    
T  30432516 agacaccctttttcatacacctcttatgtacatcc-catatattatgggtattttagtaattttacatcatatcatcaccccttttcatctcttctttca 30432418  T
Q  183 atgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||| |||||||||||||||||||||  ||||||| ||||||||||||||    
T  30432417 atgtttttgccacgtgtcacaaatgtgtgtgggtataaaagggtgtatg 30432369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 221
Target Start/End: Complemental strand, 43186217 - 43186065
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | |||||||||||||||||||||||||||| |||||||||||| |||||||||||| || |||||||||||| | |||||    
T  43186217 gaaaaagataggt-agacatcatttttcatacacttcttatgtacaccct-atgtattaggggcatttgagtaattttatatcatatcatcacctttttt 43186120  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtg--ggtgtaaaag 221  Q
    ||||| ||||||||||| ||||||||| | |||||||||||||  ||||||||||    
T  43186119 catcttttctttcaatgtttttgccacatatcacaaatgtgtgcaggtgtaaaag 43186065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 12665536 - 12665374
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcc-tttt 167  Q
    ||||||||||||| ||||| | |||||| ||||| ||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| || ||||    
T  12665536 gaaaaagataggt-agacatcctttttcgtacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 12665438  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    | |||||||||||||||| ||||||||| ||| |||||  |||||| |||||||||||||||||    
T  12665437 ttatctcttctttcaatgtttttgccacatgttacaaatgtgtgtgagtgtaaaagggtgtatg 12665374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 59 - 229
Target Start/End: Complemental strand, 36189415 - 36189246
Alignment:
Q  59 atttttatacgaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcat 158  Q
    |||||| || ||||||||||||| ||||||| ||||||||||||  |||||||||||||  ||||  ||||||||||| | ||||| || ||||||||||    
T  36189415 atttttttaggaaaaagataggt-agacaccctttttcatacaccacttatgtacacccatatgt--taggggtattttaataattttatatcatatcat 36189319  T
Q  159 catcctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||  | ||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||||||||||||    
T  36189318 cactccttttcatctcttctttcaatatttttgccacgtgtcacaaatgtatgtgggtgtaaaagggtgtatg 36189246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 18184743 - 18184582
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | |||||||||||| | ||||||||||| |||||| |||||||||||| ||||||| || |||||||||||| || ||||    
T  18184743 gaaaaagataggt-agacatcctttttcatacaccttttatgtacacc-tcatgtgttaggggtattttagtaattttatatcatatcatcacccctttt 18184646  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||| ||||||| |||  |||||||||||||  |||||||| |||||||||||||||||    
T  18184645 catctcttcattcaatgttttcaccacgtgtcacaaatatgtgtggatgtaaaagggtgtatgt 18184582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 33726202 - 33726041
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcct-ttt 167  Q
    ||||||||||||| ||||||| ||||| |||||| ||  ||||||||  |||||| |||||||||||| |||||||  |||||| ||| ||||||  |||    
T  33726202 gaaaaagataggt-agacacccttttttatacacctcccatgtacact-tcatgtgttaggggtattttagtaatttcacatcacatcgtcatccacttt 33726105  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||||| ||||||||| |||||||||||  ||||||||||||| ||||||||    
T  33726104 tcatctcttctttcaatgtttttgccacatgtcacaaatgtttgtgggtgtaaaaaggtgtatg 33726041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 229
Target Start/End: Original strand, 42668838 - 42668942
Alignment:
Q  126 taggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaa--atgtgtgggtgtaaaaggg 223  Q
    ||||||||||  |||||||  |||||||| ||||| ||| | |||| |||||||| |||| ||||||||||||||||||   ||||||||||| |||| |    
T  42668838 taggggtattgtagtaatttcacatcataccatca-cctctctcatatcttcttttaatgtttttgccacgtgtcacaattgtgtgtgggtgtcaaagtg 42668936  T
Q  224 tgtatg 229  Q
    ||||||    
T  42668937 tgtatg 42668942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 170 - 229
Target Start/End: Original strand, 31547 - 31608
Alignment:
Q  170 atctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||| ||||||||| |||||||| ||  ||||||||| |||| |||||||    
T  31547 atctcttctttcaatgtttttgccacatgtcacaattgtatgtgggtgtcaaagtgtgtatg 31608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 67 - 216
Target Start/End: Original strand, 38845021 - 38845168
Alignment:
Q  67 acgaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttt 166  Q
    ||||||||||||| | | ||||| ||||| ||||||   | ||||||||||| |||| |||||| ||||| |||||||   ||||| ||||||| || |     
T  38845021 acgaaaaagatagataa-acaccattttttatacacccttcatgtacacccttatgtgttagggttattttagtaatttctcatcacatcatcacccctc 38845119  T
Q  167 ttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtgggtgt 216  Q
    || |||| ||||||||||  |||| |||| |||||||| |||||| ||||    
T  38845120 tt-atcttttctttcaatattttttccacatgtcacaattgtgtgtgtgt 38845168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 100; Significance: 1e-49; HSPs: 10)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 16090011 - 16089852
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| |||||||||||||||||||| |||||||||||||| ||||| |||||||||||| ||||||| |||||||||||| || |||||||    
T  16090011 gaaaaagataggt-agacaccttttttcatacacctcttatgtacaccc-catgtgttaggggtattttagtaattttacatcatatcacca-ccttttt 16089915  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||    
T  16089914 tatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 16089852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 33732759 - 33732599
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| |||||||||||| |||||||||||||| ||| |||||||||||||| ||||||| |||||||||||| || |||||||    
T  33732759 gaaaaagataggt-agacaccctttttcatacacctcttatgtacaccc-catatattaggggtattttagtaattttacatcatatcaccacccttttt 33732662  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  33732661 catctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 33732599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 44958304 - 44958143
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | |||||||||||| ||||||||| |||||||||| |||||||||||| ||||||| ||||||||||||||| |||||||    
T  44958304 gaaaaagataggt-agacatcctttttcatacacctcttatgtataccctcatgtgttaggggtattttagtaattttacatcatatcatcacccttttt 44958206  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
     |||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  44958205 tatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 44958143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 71 - 230
Target Start/End: Original strand, 3830900 - 3831057
Alignment:
Q  71 aaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttca 170  Q
    ||||||||||| ||||||| |||||||||||| |||||||||||||| ||||| |||||||||| | ||||||| ||||||| || |||| |  ||||||    
T  3830900 aaaagataggt-agacaccctttttcatacacctcttatgtacaccc-catgtgttaggggtatattagtaattttacatcagataatcaccacttttca 3830997  T
Q  171 tctcttctttcaatgattttgccacgtgtcacaaatgtgtgggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3830998 tctcttctttcaatgtttttgccacgtgtcacaaatgtgtgggtgtaaaagggtgtatgt 3831057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 37498863 - 37499026
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatc--cttt 166  Q
    ||||||||||||| ||||||| ||||| |||||| ||||||||||| || ||||| |||||||||||| ||||||| ||||||||||||||| |  ||||    
T  37498863 gaaaaagataggt-agacacccttttttatacacctcttatgtacatccccatgtgttaggggtattttagtaattttacatcatatcatcaccctcttt 37498961  T
Q  167 ttcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||| ||||||||| |||||||||  |||||| |||||||||| ||||||    
T  37498962 ttcatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgagtgtaaaaggatgtatg 37499026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 91 - 225
Target Start/End: Complemental strand, 14573165 - 14573029
Alignment:
Q  91 tttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgatttt 190  Q
    |||| ||||||| |||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||| |||||| ||||||||||||||||| ||||    
T  14573165 ttttacatacacctcttatgtacacccccatgtgttaggggtattttagtaattttacatcatatcatcacccttttccatctcttctttcaatgttttt 14573066  T
Q  191 gccacgtgtcacaaatg--tgtgggtgtaaaagggtg 225  Q
    || ||||||||||||||  ||||| ||||||||||||    
T  14573065 gctacgtgtcacaaatgtgtgtggatgtaaaagggtg 14573029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 64 - 229
Target Start/End: Complemental strand, 36315757 - 36315591
Alignment:
Q  64 tatacgaaaaagataggtcagaca-ccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatc 162  Q
    |||| ||||||||||||| ||||| |||||||| |||||| ||||||||||||| |||||| | |||||||||| | | |||  |||||| || |||| |    
T  36315757 tataggaaaaagataggt-agacatccttttttgatacacctcttatgtacacc-tcatgtgtcaggggtattttaatcatttcacatcacattatcacc 36315660  T
Q  163 ctttttcatctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
      |||| |||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  36315659 tctttttatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 36315591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 37914237 - 37914397
Alignment:
Q  69 gaaaaagataggtcagacacc-ttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcctttt 167  Q
    ||||||||||||| ||||||| |||||| |||||| |||||||||||||| ||||||  |||| ||||| | | |||  |||||| || |||| || |||    
T  37914237 gaaaaagataggt-agacacccttttttgatacacctcttatgtacaccc-catgtaccaggg-tattttaatcatttcacatcacattatcaccccttt 37914333  T
Q  168 tcatctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    | |||||||||||||||| ||||||||| |||||||||  ||||||| ||||||||||||||||    
T  37914334 ttatctcttctttcaatgtttttgccacatgtcacaaatgtgtgtggatgtaaaagggtgtatg 37914397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 127 - 211
Target Start/End: Original strand, 24137149 - 24137233
Alignment:
Q  127 aggggtatttgagtaattatacatcatatcatcatcctttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    |||||||||| |||||||  |||||| ||| |||||| ||||||||||||||||||||| ||||| ||| |||||||||||||||    
T  24137149 aggggtattttagtaatttcacatcacatcctcatcccttttcatctcttctttcaatgtttttgtcacatgtcacaaatgtgtg 24137233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 6376239 - 6376394
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||| |||||| ||  ||||||| | |||||| |||| ||||||| |||||||  |||||| ||| ||| || ||||    
T  6376239 gaaaaagataggt-agacatccttttttatacacctcccatgtacatc-tcatgtgttagaggtattttagtaatttcacatcacatcctcacccatttt 6376336  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    |||||||||||||||||     ||||| |||||||||  ||||||||||||||||||||||||    
T  6376337 catctcttctttcaatg-----gccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 6376394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 96; Significance: 3e-47; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 3986906 - 3987066
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||||||||| || ||||||| |||| ||||||||| |||||||||||||||| |||||||||| ||||||| ||||    
T  3986906 gaaaaagataggt-agacatcatttttcatacatttattatgtataccc-catgtattaagggtatttgagtaattttacatcatattatcatccctttt 3987003  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| |||||||||||||||||||  ||||||||||||||||||||||||    
T  3987004 catctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtgggtgtaaaagggtgtatg 3987066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 64 - 221
Target Start/End: Original strand, 15345655 - 15345810
Alignment:
Q  64 tatacgaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatcc 163  Q
    |||| |||||| |||||| ||||| |||||||||||||||||||||||||||||| |||||||||||| ||||||||||||  | |||||||||||| |     
T  15345655 tataggaaaaaaataggt-agacatcttttttcatacacttcttatgtacaccct-atgtattaggggcatttgagtaatttgatatcatatcatcacct 15345752  T
Q  164 tttttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtgggtgtaaaag 221  Q
    |||||||||| ||||||||||| |||||||||||||||||||||| ||||||||||||    
T  15345753 tttttcatcttttctttcaatgtttttgccacgtgtcacaaatgtatgggtgtaaaag 15345810  T

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Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 3118047 - 3118208
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | |||||||||||  |||||||||||| | |||||||||||||||||| ||||||| |||||||| ||| || |||||||    
T  3118047 gaaaaagataggt-agacatcctttttcatacatctcttatgtacactcccatgtattaggggtattttagtaattttacatcatgtcaccacccttttt 3118145  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaa--tgtgtgggtgtaaaagggtgtatg 229  Q
     |||| ||||||||||| |||||||||||||||||||  |||||| |||||||||||||||||    
T  3118146 tatctattctttcaatgtttttgccacgtgtcacaaatgtgtgtgagtgtaaaagggtgtatg 3118208  T

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Target: chr6; HSP #4
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 69 - 229
Target Start/End: Complemental strand, 14023124 - 14022964
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||||| ||||| |||||| ||  ||||||||| |||||| |||||||||||| |||||||  |||||| ||| ||| || || |    
T  14023124 gaaaaagataggt-agacacccttttttatacacctcccatgtacacc-tcatgtgttaggggtattttagtaatttcacatcacatcgtcaccccttgt 14023027  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatg--tgtgggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||| ||||||||| |||||||||||  ||||||||||||||||||||||    
T  14023026 catctcttctttcaatgtttttgccacatgtcacaaatgtgtgtgggtgtaaaagggtgtatg 14022964  T

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Target: chr6; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 69 - 230
Target Start/End: Complemental strand, 13697758 - 13697598
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||| | | ||||||||||| | ||||||||||||| ||||| |||| | ||||| ||||||| || |||||||||||| || ||||    
T  13697758 gaaaaagataggt-agagatcatttttcatacattacttatgtacaccc-catgtgttagagatattttagtaattttatatcatatcatcacccgtttt 13697661  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgt-gggtgtaaaagggtgtatgt 230  Q
    ||||||||||||||||| |||| |||||| ||||||||||||  |||||||||||||| ||||    
T  13697660 catctcttctttcaatgtttttaccacgtatcacaaatgtgtatggtgtaaaagggtgcatgt 13697598  T

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Target: chr6; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 69 - 211
Target Start/End: Complemental strand, 24208634 - 24208494
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatatcatcatccttttt 168  Q
    ||||||||||||| ||||| | ||||| |||||| ||| || |||||| |||||| |||||||||||| |||||||  |||||| ||| ||| |||||||    
T  24208634 gaaaaagataggt-agacatccttttttatacacctctcatttacacc-tcatgtgttaggggtattttagtaatttcacatcacatcctcacccttttt 24208537  T
Q  169 catctcttctttcaatgattttgccacgtgtcacaaatgtgtg 211  Q
    ||||||||||||||||| ||||||||| | |||||||||||||    
T  24208536 catctcttctttcaatgtttttgccacatatcacaaatgtgtg 24208494  T

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Target: scaffold0043 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 69 - 229
Target Start/End: Original strand, 87163 - 87324
Alignment:
Q  69 gaaaaagataggtcagacaccttttttcatacacttcttatgtacaccctcatgtattaggggtatttgagtaattatacatcatat--catcatccttt 166  Q
    ||||||||||||| |||||||||||||||||||| | |||||||||||| ||||| |||||||||||| ||||||| || || ||||  |||||   |||    
T  87163 gaaaaagataggt-agacaccttttttcatacaccttttatgtacaccc-catgtgttaggggtattttagtaattttatattatatatcatcactattt 87260  T
Q  167 ttcatctcttctttcaatgattttgccacgtgtcacaaatgtgtg-ggtgtaaaagggtgtatg 229  Q
    ||||||||||||||||||| ||||||||||||||||||||||||| |||||| |||||||||||    
T  87261 ttcatctcttctttcaatgtttttgccacgtgtcacaaatgtgtgtggtgtacaagggtgtatg 87324  T

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