View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8478_low_13 (Length: 464)

Name: NF8478_low_13
Description: NF8478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8478_low_13
NF8478_low_13
[»] chr6 (34 HSPs)
chr6 (208-448)||(29469275-29469515)
chr6 (1-204)||(29469036-29469239)
chr6 (46-204)||(28479527-28479685)
chr6 (46-204)||(29791982-29792140)
chr6 (2-195)||(29695553-29695746)
chr6 (1-180)||(28490642-28490821)
chr6 (1-180)||(29803052-29803231)
chr6 (335-438)||(28490376-28490479)
chr6 (335-438)||(29802786-29802889)
chr6 (375-448)||(28479248-28479321)
chr6 (375-448)||(29695265-29695338)
chr6 (375-448)||(29791703-29791776)
chr6 (50-178)||(29674184-29674312)
chr6 (375-444)||(29673892-29673961)
chr6 (375-448)||(29727829-29727902)
chr6 (351-448)||(29759325-29759422)
chr6 (51-158)||(27676728-27676835)
chr6 (146-204)||(29728030-29728088)
chr6 (146-204)||(29759526-29759584)
chr6 (51-158)||(27697694-27697801)
chr6 (52-155)||(28901570-28901673)
chr6 (51-161)||(26885037-26885147)
chr6 (146-204)||(29724440-29724498)
chr6 (54-161)||(26862550-26862657)
chr6 (51-158)||(27592129-27592236)
chr6 (51-161)||(25511859-25511969)
chr6 (51-161)||(26056889-26056999)
chr6 (51-161)||(26076859-26076969)
chr6 (52-158)||(27337203-27337309)
chr6 (52-158)||(27397943-27398049)
chr6 (51-161)||(27530406-27530516)
chr6 (123-168)||(26636685-26636730)
chr6 (123-168)||(26742651-26742696)
chr6 (123-168)||(26950782-26950827)
[»] chr3 (2 HSPs)
chr3 (2-178)||(614618-614794)
chr3 (286-448)||(614937-615099)
[»] chr8 (3 HSPs)
chr8 (1-180)||(12589589-12589768)
chr8 (365-436)||(12589961-12590032)
chr8 (55-204)||(16441027-16441176)
[»] chr1 (2 HSPs)
chr1 (50-177)||(5922558-5922685)
chr1 (378-448)||(5922348-5922418)
[»] scaffold0012 (4 HSPs)
scaffold0012 (375-448)||(212000-212073)
scaffold0012 (146-204)||(212204-212262)
scaffold0012 (146-204)||(238945-239003)
scaffold0012 (375-448)||(238744-238817)
[»] scaffold0007 (3 HSPs)
scaffold0007 (50-155)||(67276-67381)
scaffold0007 (50-99)||(31929-31978)
scaffold0007 (50-99)||(36678-36727)
[»] scaffold0573 (1 HSPs)
scaffold0573 (52-155)||(8121-8224)
[»] chr4 (1 HSPs)
chr4 (119-194)||(5090022-5090097)
[»] chr2 (3 HSPs)
chr2 (377-423)||(17662503-17662549)
chr2 (377-423)||(17713529-17713575)
chr2 (123-189)||(17992292-17992358)
[»] chr5 (2 HSPs)
chr5 (121-168)||(16691904-16691951)
chr5 (375-446)||(13717426-13717499)


Alignment Details
Target: chr6 (Bit Score: 193; Significance: 1e-105; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 208 - 448
Target Start/End: Original strand, 29469275 - 29469515
Alignment:
Q  208 gctagttatcttgaaagcttttaaaaagaaatttagtccaagctataagactgctttatttgaacagtatgctagtcgattggatgtgaacgaactgcct 307  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||| |||||||| ||||| ||||||||||||| || |||||    
T  29469275 gctagttatcttgaaagcttttaaaaataaatttagtccaagctataaggatgctttatttgcacagtatggtagtctattggatgtgaacaaattgcct 29469374  T
Q  308 aaactgaaagcttttaagactggcgaagttttttcaggttatgtgcatgttatattccgtgccatatcatatgcttctggccttccactagctttggaag 407  Q
    | |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  29469375 agactgaaagcttttaagactgacgaagttttttcaggttatgtgcatgttatattacgtgccatatcatatgcttctggccttccactggctttggaag 29469474  T
Q  408 tcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  29469475 tcataggttctcacttttttaataagacaattgaacaatgt 29469515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 29469036 - 29469239
Alignment:
Q  1 ttaacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattag 100  Q
    ||||||||||||||||||||||||||||||||        |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  29469036 ttaacaagtgttagacaaggaatttcaatattacaaaaaaggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggagcaattag 29469135  T
Q  101 aggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtac 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29469136 aggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtac 29469235  T
Q  201 atat 204  Q
    ||||    
T  29469236 atat 29469239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 28479685 - 28479527
Alignment:
Q  46 caccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagag 145  Q
    |||||||||||||||||||| ||||| || |||||||||||||| || |||||| |||||||||||||||| || |||||||||||||  || |||||||    
T  28479685 caccaaaagaaggttcttttacttctggatgatgttgacaaggatgagcaattaaaggctattgctggaagttccgattggtttggtctaggaagtagag 28479586  T
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  28479585 tcatcatcacgactcgggacaaaaggttgctaacatatcatgggattgaaagaacatat 28479527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 46 - 204
Target Start/End: Complemental strand, 29792140 - 29791982
Alignment:
Q  46 caccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagag 145  Q
    |||||||||||||||||||| ||||| || |||||||||||||| || |||||| |||||||||||||||| || |||||||||||||  || |||||||    
T  29792140 caccaaaagaaggttcttttacttctggatgatgttgacaaggatgagcaattaaaggctattgctggaagttccgattggtttggtctaggaagtagag 29792041  T
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    |||||||||| ||||||||||||||||||||||||||||||||| ||||| | ||||||    
T  29792040 tcatcatcacgactcgggacaaaaggttgctaacatatcatgggattgaaagaacatat 29791982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 2 - 195
Target Start/End: Complemental strand, 29695746 - 29695553
Alignment:
Q  2 taacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattaga 101  Q
    |||| ||||||||||||||| ||||||||||        || | |||||||||||||||||||| ||||| || |||||||||||||| || |||||| |    
T  29695746 taaccagtgttagacaaggagtttcaatattacaacaaaggcttcaccaaaagaaggttcttttacttctggatgatgttgacaaggatgagcaattaaa 29695647  T
Q  102 ggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaa 195  Q
    ||||||||||||||| || || ||||||||||  || ||||||||||||||||| |||||||||||||| |||||||||||||||||| |||||    
T  29695646 ggctattgctggaagttccgaatggtttggtctaggaagtagagtcatcatcacgactcgggacaaaagattgctaacatatcatgggattgaa 29695553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 28490821 - 28490642
Alignment:
Q  1 ttaacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattag 100  Q
    |||||||||||| ||||||||||||| || ||        || |||||||||||||| |||||||||||||||| |||||||||||   ||| |||||||    
T  28490821 ttaacaagtgttggacaaggaatttccatgttacgacaaaggctccaccaaaagaagattcttttgcttctagatgatgttgacaatttggagcaattag 28490722  T
Q  101 aggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaaca 180  Q
    |||| |||||||||||||| | |||||||||||  || |||||||||||||| || ||||||||||||||||||||||||    
T  28490721 aggccattgctggaagatccgtttggtttggtccaggaagtagagtcatcattacgactcgggacaaaaggttgctaaca 28490642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 180
Target Start/End: Complemental strand, 29803231 - 29803052
Alignment:
Q  1 ttaacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattag 100  Q
    |||||||||||| ||||||||||||| || ||        || |||||||||||||| |||||||||||||||| |||||||||||   ||| |||||||    
T  29803231 ttaacaagtgttggacaaggaatttccatgttacgacaaaggctccaccaaaagaagattcttttgcttctagatgatgttgacaatttggagcaattag 29803132  T
Q  101 aggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaaca 180  Q
    |||| |||||||||||||| | |||||||||||  || |||||||||||||| || ||||||||||||||||||||||||    
T  29803131 aggccattgctggaagatccgtttggtttggtccaggaagtagagtcatcattacgactcgggacaaaaggttgctaaca 29803052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 28490479 - 28490376
Alignment:
Q  335 gttttttcaggttatgtgcatgttatattccgtgccatatcatatgcttctggccttccactagctttggaagtcataggttctcacttttttaataaga 434  Q
    |||||||||||||||||||||||| ||   |||||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  28490479 gttttttcaggttatgtgcatgttttaaaacgtgcggtagcatatgcttctggccttccactcgctttggaagtcataggttctcacttttttaataaga 28490380  T
Q  435 caat 438  Q
    ||||    
T  28490379 caat 28490376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 335 - 438
Target Start/End: Complemental strand, 29802889 - 29802786
Alignment:
Q  335 gttttttcaggttatgtgcatgttatattccgtgccatatcatatgcttctggccttccactagctttggaagtcataggttctcacttttttaataaga 434  Q
    |||||||||||||||||||||||| ||   |||||  || |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29802889 gttttttcaggttatgtgcatgttttaaaacgtgcggtagcatatgcttctggccttccactcgctttggaagtcataggttctcacttttttaataaga 29802790  T
Q  435 caat 438  Q
    ||||    
T  29802789 caat 29802786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 28479321 - 28479248
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  28479321 catatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgt 28479248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 29695338 - 29695265
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  29695338 catatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgt 29695265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 29791776 - 29791703
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  29791776 catatgcttctggccttccacttgctttggaagtcataggttctcacttttttaacaagacaatagaacaatgt 29791703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 50 - 178
Target Start/End: Complemental strand, 29674312 - 29674184
Alignment:
Q  50 aaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcat 149  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||| ||||| ||  |||||||| ||   ||||||||||| ||    
T  29674312 aaaagaaggttcttttgcttttagacgatgttgacaagaaggagcaattaaaggctattgcaggaagttccaattggtttcgtaaaggcagtagagtaat 29674213  T
Q  150 catcaccactcgggacaaaaggttgctaa 178  Q
     ||||| |||||| ||||||  |||||||    
T  29674212 aatcacaactcggtacaaaaatttgctaa 29674184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 444
Target Start/End: Complemental strand, 29673961 - 29673892
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaaca 444  Q
    ||||||||||||| | |||||| |||||||||||||| ||||||||||||| |||||||||||| |||||    
T  29673961 catatgcttctggtcatccacttgctttggaagtcatcggttctcacttttctaataagacaatagaaca 29673892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 29727902 - 29727829
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    ||||||| ||||| | |||||| |||||||||||||| ||||||||||||| |||||||||||| |||||||||    
T  29727902 catatgcctctggtcatccactcgctttggaagtcatgggttctcacttttctaataagacaatagaacaatgt 29727829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 351 - 448
Target Start/End: Complemental strand, 29759422 - 29759325
Alignment:
Q  351 tgcatgttatattccgtgccatatcatatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    |||||||||||   |||| | || ||||||||||||| | |||||| ||||| |||||||| ||||||||||||| |||||||||||| |||||||||    
T  29759422 tgcatgttatagaacgtgtcgtagcatatgcttctggtcatccacttgctttagaagtcatgggttctcacttttctaataagacaatagaacaatgt 29759325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 27676835 - 27676728
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| || |||||||||||   ||||||  |||||||| | |||||||||   ||||||||||||| ||| || |||||||||    
T  27676835 aaagaagattcttttgattcttgatgatgttgacaaactggatcagctagaggctttggctggaagactcgattggtttggtcctggaagcagagtcatc 27676736  T
Q  151 atcaccac 158  Q
    ||||||||    
T  27676735 atcaccac 27676728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 29728088 - 29728030
Alignment:
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    |||||||||| ||||||||||||||||||||||||| ||||||| ||||| ||| ||||    
T  29728088 tcatcatcacaactcgggacaaaaggttgctaacatgtcatgggattgaatgtaaatat 29728030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 29759584 - 29759526
Alignment:
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    |||||||||| |||||||| |||| ||||||||||| |||||||||||||| |||||||    
T  29759584 tcatcatcacaactcgggataaaaagttgctaacatgtcatggggttgaacatacatat 29759526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 27697801 - 27697694
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| ||||||||||||||   ||||||  || ||||| | |||||| ||   ||||||||||||| ||| || |||||||||    
T  27697801 aaagaagattcttttgattctcgacgatgttgacaaactggatcagctacaggctttggctggaggactcgattggtttggtcctggaagcagagtcatc 27697702  T
Q  151 atcaccac 158  Q
    ||||||||    
T  27697701 atcaccac 27697694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 155
Target Start/End: Original strand, 28901570 - 28901673
Alignment:
Q  52 aagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatca 151  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||||   ||||||| ||||  | | || |||||||||  ||| |||||||| ||||    
T  28901570 aagaaggttcttttgcttcttgacaatgttgacaagttggatcaattacgcgctattgttggagaacccgaatggtttggtaatggaagtagagttatca 28901669  T
Q  152 tcac 155  Q
    ||||    
T  28901670 tcac 28901673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 26885037 - 26885147
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| || |||||||||||   ||| ||  |||||||| | |||||| ||  |||||||||||||||||| || || ||||||    
T  26885037 aaagaagattcttttgattcttgatgatgttgacaaaatggagcagctagaggctttggctggaggacttgattggtttggtcgtggaagcagggtcatc 26885136  T
Q  151 atcaccactcg 161  Q
    || ||||||||    
T  26885137 attaccactcg 26885147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 29724498 - 29724440
Alignment:
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    ||||| |||| | |||||||||||| |||||||||| |||||||||||||| |||||||    
T  29724498 tcatcgtcacaattcgggacaaaagcttgctaacatgtcatggggttgaacttacatat 29724440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 161
Target Start/End: Original strand, 26862550 - 26862657
Alignment:
Q  54 gaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatc 153  Q
    |||| |||||||| |||| || |||||||||||   ||| ||  |||||||  | |||||| ||  |||||||||||||| ||| ||||||||||||||     
T  26862550 gaagattcttttgattctcgatgatgttgacaaactggaacagctagaggcattagctggaggacttgattggtttggtcatggaagtagagtcatcatt 26862649  T
Q  154 accactcg 161  Q
    ||||||||    
T  26862650 accactcg 26862657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 51 - 158
Target Start/End: Complemental strand, 27592236 - 27592129
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| || |||||||||||   ||||||  |||| ||| | |||||| ||  ||||||||| |||| ||| || |||||||||    
T  27592236 aaagaagattcttttgattcttgatgatgttgacaaactggatcagctagatgctttggctggaggacttgattggttcggtcctggaagcagagtcatc 27592137  T
Q  151 atcaccac 158  Q
    ||||||||    
T  27592136 atcaccac 27592129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 25511859 - 25511969
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| ||||||||||||||   ||| ||  |||||||| | |||||| ||  ||| ||||| |||| ||| || |||||||||    
T  25511859 aaagaagattcttttgattcttgacgatgttgacaaactggagcagctagaggctttggctggaggacttgactggttcggtcctggaagcagagtcatc 25511958  T
Q  151 atcaccactcg 161  Q
    || ||||||||    
T  25511959 attaccactcg 25511969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 26056889 - 26056999
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| ||||||||||||||   ||| ||  |||| ||| | |||||| ||  ||||||||| |||| ||| || |||||||||    
T  26056889 aaagaagattcttttgattcttgacgatgttgacaaactggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatc 26056988  T
Q  151 atcaccactcg 161  Q
    || ||||||||    
T  26056989 attaccactcg 26056999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 161
Target Start/End: Original strand, 26076859 - 26076969
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| ||||||||||||||   ||| ||  |||| ||| | |||||| ||  ||||||||| |||| ||| || |||||||||    
T  26076859 aaagaagattcttttgattcttgacgatgttgacaaactggagcagctagacgctttggctggaggacttgattggttcggtcttggaagcagagtcatc 26076958  T
Q  151 atcaccactcg 161  Q
    || ||||||||    
T  26076959 attaccactcg 26076969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 27337309 - 27337203
Alignment:
Q  52 aagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatca 151  Q
    |||||| |||||||| |||| || ||||||||| |   ||||||  |||||||| | |||||| ||  ||||||||| |||| ||| || ||||||||||    
T  27337309 aagaagattcttttgattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatca 27337210  T
Q  152 tcaccac 158  Q
    |||||||    
T  27337209 tcaccac 27337203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 27398049 - 27397943
Alignment:
Q  52 aagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatca 151  Q
    |||||| |||||||| |||| || ||||||||| |   ||||||  |||||||| | |||||| ||  ||||||||| |||| ||| || ||||||||||    
T  27398049 aagaagattcttttgattctcgatgatgttgaccaactggatcagctagaggctttggctggaggacttgattggttcggtcctggaagcagagtcatca 27397950  T
Q  152 tcaccac 158  Q
    |||||||    
T  27397949 tcaccac 27397943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 51 - 161
Target Start/End: Complemental strand, 27530516 - 27530406
Alignment:
Q  51 aaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatc 150  Q
    ||||||| |||||||| |||| || |||||||||||   ||||||  |||||||  | |||||| ||  ||||||||| |||| ||| ||||||||||||    
T  27530516 aaagaagattcttttgattcttgatgatgttgacaaactggatcagctagaggccttggctggaggacttgattggttcggtcctgggagtagagtcatc 27530417  T
Q  151 atcaccactcg 161  Q
    || || |||||    
T  27530416 attactactcg 27530406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 26636685 - 26636730
Alignment:
Q  123 ttggtttggtcgtggcagtagagtcatcatcaccactcgggacaaa 168  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||||||    
T  26636685 ttggcttggtcgtggcagcagagtaatcatcaccactcgagacaaa 26636730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 26742651 - 26742696
Alignment:
Q  123 ttggtttggtcgtggcagtagagtcatcatcaccactcgggacaaa 168  Q
    |||| ||||||||||||| ||||| |||||||||||||| ||||||    
T  26742651 ttggcttggtcgtggcagcagagtaatcatcaccactcgagacaaa 26742696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 168
Target Start/End: Original strand, 26950782 - 26950827
Alignment:
Q  123 ttggtttggtcgtggcagtagagtcatcatcaccactcgggacaaa 168  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||    
T  26950782 ttggcttggtcgtggcagcagagtcatcattaccactcgtgacaaa 26950827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 97; Significance: 2e-47; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 614618 - 614794
Alignment:
Q  2 taacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattaga 101  Q
    ||||||||||| |||||||||||| ||||||        || | || |||||||||||||||||||||||||||||||||||||| ||||| |||||  |    
T  614618 taacaagtgttggacaaggaattttaatattacaaaaaaggcttcaacaaaagaaggttcttttgcttctagacgatgttgacaaagaggagcaattgaa 614717  T
Q  102 ggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaa 178  Q
    ||||||||||||||| || |||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||    
T  614718 ggctattgctggaagttccgattggtttggtccaggcagtagagtcatcatcacgactcgggacaaaaggttgctaa 614794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 286 - 448
Target Start/End: Original strand, 614937 - 615099
Alignment:
Q  286 attggatgtgaacgaactgcctaaactgaaagcttttaagactggcgaagttttttcaggttatgtgcatgttatattccgtgccatatcatatgcttct 385  Q
    |||||||||||||||| ||| || |||||||| ||| |||| || | ||| |||||||||||||| | ||||| ||   |||| | || |||||||||||    
T  614937 attggatgtgaacgaattgcgtagactgaaagatttgaagaatgacaaaggtttttcaggttatgcgaatgttttaaaacgtgtcgtagcatatgcttct 615036  T
Q  386 ggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    || | |||||| |||||||||||||| |||||||| |||| |||||||||||| |||||||||    
T  615037 ggtcatccacttgctttggaagtcatgggttctcatttttctaataagacaatagaacaatgt 615099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 80; Significance: 2e-37; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 180
Target Start/End: Original strand, 12589589 - 12589768
Alignment:
Q  1 ttaacaagtgttagacaaggaatttcaatattnnnnnnnnggttccaccaaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattag 100  Q
    |||||||||||| |||||||||| ||||||||        || ||| |||||||||||||||||||||||||||||||||||||||   ||| |||||||    
T  12589589 ttaacaagtgttggacaaggaatgtcaatattacaacaaaggctccgccaaaagaaggttcttttgcttctagacgatgttgacaatttggagcaattag 12589688  T
Q  101 aggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaaca 180  Q
    ||||  ||||||||||||||| ||||||||| |  ||||| ||||||||||| || ||||| ||||||||||| ||||||    
T  12589689 aggccgttgctggaagatctgtttggtttggacaaggcagcagagtcatcattacgactcgagacaaaaggttactaaca 12589768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 365 - 436
Target Start/End: Original strand, 12589961 - 12590032
Alignment:
Q  365 cgtgccatatcatatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagaca 436  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12589961 cgtgccgtagcatatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagaca 12590032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 204
Target Start/End: Original strand, 16441027 - 16441176
Alignment:
Q  55 aaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatcatca 154  Q
    |||||||||||| |||| ||||||||||||||   ||| ||  | |||| |||||  |||||  ||||||||| ||||| ||| || ||||| ||||| |    
T  16441027 aaggttcttttggttcttgacgatgttgacaaaatggagcagattgaggttattgtgggaaggcctgattggtatggtcctggtagcagagttatcatta 16441126  T
Q  155 ccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    | ||||||||||||  ||||||| ||  ||||||||||||| | ||||||    
T  16441127 caactcgggacaaacagttgctagcaagtcatggggttgaaagaacatat 16441176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 56; Significance: 5e-23; HSPs: 2)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 50 - 177
Target Start/End: Complemental strand, 5922685 - 5922558
Alignment:
Q  50 aaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcat 149  Q
    ||||||||||||||||||||||||| ||||| ||| || || | ||||| || || ||||||||| ||  |||||||| |||||  ||||||||||||||    
T  5922685 aaaagaaggttcttttgcttctagatgatgtcgacgagcagaaacaattggatgcaattgctggaggaaatgattggtatggtctcggcagtagagtcat 5922586  T
Q  150 catcaccactcgggacaaaaggttgcta 177  Q
    |||||| || ||||||||| ||||||||    
T  5922585 catcacaacccgggacaaagggttgcta 5922558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 378 - 448
Target Start/End: Complemental strand, 5922418 - 5922348
Alignment:
Q  378 atgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    ||||||||||||||||  | ||||| ||||| |||||||||||||| ||| |||| ||| | |||||||||    
T  5922418 atgcttctggccttcctttggctttagaagtaataggttctcacttatttcataaaacagtagaacaatgt 5922348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 46; Significance: 5e-17; HSPs: 4)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 212073 - 212000
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    ||||||||||||| | |||||| |||||||| ||||| ||||||||||||| |||||||||||| |||||||||    
T  212073 catatgcttctggtcatccacttgctttggaggtcatgggttctcacttttataataagacaatagaacaatgt 212000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 212262 - 212204
Alignment:
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    ||||||| || ||||||||||||| ||||||||||| ||||||||||||||| ||||||    
T  212262 tcatcattacaactcgggacaaaaagttgctaacatgtcatggggttgaacgcacatat 212204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 204
Target Start/End: Complemental strand, 239003 - 238945
Alignment:
Q  146 tcatcatcaccactcgggacaaaaggttgctaacatatcatggggttgaacgtacatat 204  Q
    |||||||||| |||||||| ||||||||||| |||| || ||||||||||| |||||||    
T  239003 tcatcatcacaactcgggataaaaggttgcttacatgtcgtggggttgaacatacatat 238945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 375 - 448
Target Start/End: Complemental strand, 238817 - 238744
Alignment:
Q  375 catatgcttctggccttccactagctttggaagtcataggttctcacttttttaataagacaattgaacaatgt 448  Q
    ||||||||||||| | |||||| ||||||||||| ||  | |||||||||| ||| |||||||| |||||||||    
T  238817 catatgcttctggtcatccactcgctttggaagttatgagctctcacttttataaaaagacaatagaacaatgt 238744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 38; Significance: 0.000000000003; HSPs: 3)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 50 - 155
Target Start/End: Original strand, 67276 - 67381
Alignment:
Q  50 aaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcat 149  Q
    ||||||| |||||||||||||| ||| |||||||||||  ||||||||||   ||||||| ||||  | |||  |||||||||||||| |||||||| ||    
T  67276 aaaagaaagttcttttgcttcttgacaatgttgacaagttggatcaattacgcgctattgttggagaacctggatggtttggtcgtggaagtagagttat 67375  T
Q  150 catcac 155  Q
     |||||    
T  67376 gatcac 67381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 31929 - 31978
Alignment:
Q  50 aaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaatta 99  Q
    ||||||| |||||||||||||| ||| |||||||||||  ||||||||||    
T  31929 aaaagaaagttcttttgcttcttgacaatgttgacaagttggatcaatta 31978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 36678 - 36727
Alignment:
Q  50 aaaagaaggttcttttgcttctagacgatgttgacaaggaggatcaatta 99  Q
    ||||||| |||||||||||||| ||| |||||||||||  ||||||||||    
T  36678 aaaagaaagttcttttgcttcttgacaatgttgacaagttggatcaatta 36727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 52 - 155
Target Start/End: Complemental strand, 8224 - 8121
Alignment:
Q  52 aagaaggttcttttgcttctagacgatgttgacaaggaggatcaattagaggctattgctggaagatctgattggtttggtcgtggcagtagagtcatca 151  Q
    |||||||||||||||||||| ||| |||||||||||  ||||||||||   ||||||| ||||  | | || |||||||||  ||| |||||||| ||||    
T  8224 aagaaggttcttttgcttcttgacaatgttgacaagttggatcaattacgcgctattgttggagaacccgaatggtttggtaatggaagtagagttatca 8125  T
Q  152 tcac 155  Q
    ||||    
T  8124 tcac 8121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 119 - 194
Target Start/End: Complemental strand, 5090097 - 5090022
Alignment:
Q  119 ctgattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggggttga 194  Q
    ||||||||||||||| |||||| ||||||||||| |||||||| ||||||   ||||||| || ||||||| ||||    
T  5090097 ctgattggtttggtcttggcagcagagtcatcattaccactcgagacaaacacttgctaaaatgtcatgggattga 5090022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.0000000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 17662503 - 17662549
Alignment:
Q  377 tatgcttctggccttccactagctttggaagtcataggttctcactt 423  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||    
T  17662503 tatgcttctggccttccattggctttggaagtaataggttctcactt 17662549  T

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Target: chr2; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 377 - 423
Target Start/End: Original strand, 17713529 - 17713575
Alignment:
Q  377 tatgcttctggccttccactagctttggaagtcataggttctcactt 423  Q
    |||||||||||||||||| | ||||||||||| ||||||||||||||    
T  17713529 tatgcttctggccttccattggctttggaagtaataggttctcactt 17713575  T

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Target: chr2; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 17992358 - 17992292
Alignment:
Q  123 ttggtttggtcgtggcagtagagtcatcatcaccactcgggacaaaaggttgctaacatatcatggg 189  Q
    |||| ||||||||||||| ||||||||||| |||||||| ||||||   ||| |||||| |||||||    
T  17992358 ttggcttggtcgtggcagcagagtcatcattaccactcgagacaaacatttgttaacatgtcatggg 17992292  T

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Target: chr5 (Bit Score: 32; Significance: 0.00000001; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 121 - 168
Target Start/End: Original strand, 16691904 - 16691951
Alignment:
Q  121 gattggtttggtcgtggcagtagagtcatcatcaccactcgggacaaa 168  Q
    ||||||||||||| ||| |||||||||||||| |||||||| ||||||    
T  16691904 gattggtttggtcctggaagtagagtcatcattaccactcgagacaaa 16691951  T

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Target: chr5; HSP #2
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 375 - 446
Target Start/End: Original strand, 13717426 - 13717499
Alignment:
Q  375 catatgcttctggccttcc--actagctttggaagtcataggttctcacttttttaataagacaattgaacaat 446  Q
    |||||| |||||| |||||  ||| |||||||||||||| |||| || |||||||||||||||||  |||||||    
T  13717426 catatgattctggtcttccgcactcgctttggaagtcattggttttcccttttttaataagacaaaagaacaat 13717499  T

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