View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8478_low_25 (Length: 305)

Name: NF8478_low_25
Description: NF8478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8478_low_25
NF8478_low_25
[»] chr7 (25 HSPs)
chr7 (104-293)||(34389056-34389243)
chr7 (107-293)||(37002144-37002328)
chr7 (107-293)||(26624728-26624913)
chr7 (113-291)||(8867733-8867909)
chr7 (137-293)||(35090181-35090335)
chr7 (140-292)||(38638237-38638387)
chr7 (107-293)||(7002708-7002892)
chr7 (107-293)||(7048579-7048763)
chr7 (107-293)||(33685547-33685731)
chr7 (107-293)||(43184468-43184652)
chr7 (124-290)||(5555487-5555651)
chr7 (143-293)||(36658200-36658348)
chr7 (140-293)||(40920003-40920154)
chr7 (127-290)||(3114099-3114260)
chr7 (124-293)||(8394125-8394292)
chr7 (124-293)||(36630816-36630983)
chr7 (125-291)||(14777109-14777273)
chr7 (20-101)||(28958468-28958548)
chr7 (121-169)||(10876829-10876877)
chr7 (20-96)||(27954656-27954731)
chr7 (20-91)||(27951419-27951489)
chr7 (108-160)||(37966614-37966666)
chr7 (259-293)||(10868456-10868490)
chr7 (124-201)||(26502810-26502887)
chr7 (124-201)||(26589827-26589904)
[»] chr3 (22 HSPs)
chr3 (107-293)||(45182964-45183148)
chr3 (104-293)||(11018212-11018399)
chr3 (107-293)||(6930894-6931078)
chr3 (107-293)||(33040936-33041120)
chr3 (104-293)||(6503569-6503756)
chr3 (104-293)||(27935158-27935345)
chr3 (125-292)||(6269427-6269592)
chr3 (124-293)||(19390146-19390313)
chr3 (125-293)||(22968444-22968610)
chr3 (107-277)||(19565517-19565685)
chr3 (113-293)||(35514255-35514429)
chr3 (107-293)||(45335858-45336041)
chr3 (124-293)||(34084122-34084289)
chr3 (125-293)||(39771791-39771957)
chr3 (137-293)||(40081741-40081893)
chr3 (107-161)||(6890981-6891035)
chr3 (41-103)||(25805039-25805100)
chr3 (140-204)||(5135285-5135349)
chr3 (113-173)||(5354698-5354758)
chr3 (245-293)||(22922214-22922262)
chr3 (259-293)||(5135421-5135455)
chr3 (124-172)||(22922157-22922205)
[»] chr5 (23 HSPs)
chr5 (107-293)||(31680350-31680534)
chr5 (107-293)||(12278860-12279044)
chr5 (107-293)||(17332551-17332735)
chr5 (104-293)||(37254621-37254808)
chr5 (107-293)||(31501716-31501900)
chr5 (138-293)||(33430335-33430488)
chr5 (124-290)||(10033927-10034091)
chr5 (124-293)||(13817977-13818144)
chr5 (124-290)||(39657509-39657673)
chr5 (124-293)||(36293621-36293788)
chr5 (143-293)||(16155016-16155164)
chr5 (124-293)||(39434696-39434863)
chr5 (107-293)||(36291354-36291538)
chr5 (154-290)||(16333879-16334013)
chr5 (141-293)||(43068894-43069044)
chr5 (126-292)||(1776377-1776541)
chr5 (125-293)||(26283318-26283484)
chr5 (126-293)||(19985941-19986106)
chr5 (135-204)||(28801298-28801367)
chr5 (218-277)||(3155647-3155706)
chr5 (107-201)||(202622-202716)
chr5 (107-179)||(26543877-26543949)
chr5 (124-203)||(3155719-3155798)
[»] chr2 (26 HSPs)
chr2 (107-293)||(45418566-45418750)
chr2 (107-293)||(44084603-44084787)
chr2 (107-292)||(8147334-8147518)
chr2 (107-292)||(770977-771165)
chr2 (143-293)||(12756837-12756985)
chr2 (124-290)||(35962715-35962879)
chr2 (127-293)||(41251634-41251798)
chr2 (124-290)||(42439986-42440150)
chr2 (107-290)||(8059336-8059517)
chr2 (124-293)||(31581622-31581789)
chr2 (124-290)||(32127144-32127308)
chr2 (130-290)||(18981622-18981780)
chr2 (124-293)||(17445041-17445206)
chr2 (125-293)||(6403804-6403970)
chr2 (127-290)||(16405603-16405764)
chr2 (21-100)||(2412935-2413013)
chr2 (124-263)||(2958131-2958267)
chr2 (218-290)||(2285954-2286026)
chr2 (20-103)||(31758331-31758413)
chr2 (218-293)||(26162702-26162774)
chr2 (120-204)||(26237953-26238036)
chr2 (144-203)||(34905969-34906028)
chr2 (116-204)||(4555298-4555385)
chr2 (137-200)||(7072643-7072706)
chr2 (107-179)||(34523223-34523295)
chr2 (263-293)||(26238080-26238110)
[»] chr6 (13 HSPs)
chr6 (107-293)||(28996713-28996897)
chr6 (124-293)||(18339106-18339273)
chr6 (107-293)||(29743266-29743450)
chr6 (124-290)||(34948761-34948925)
chr6 (124-290)||(13837821-13837985)
chr6 (125-293)||(398618-398784)
chr6 (143-293)||(33229336-33229484)
chr6 (108-204)||(24697904-24698000)
chr6 (113-204)||(31028451-31028542)
chr6 (20-103)||(14354935-14355017)
chr6 (107-160)||(13647000-13647053)
chr6 (107-160)||(34385519-34385572)
chr6 (152-201)||(24072576-24072625)
[»] chr4 (45 HSPs)
chr4 (107-293)||(3292896-3293080)
chr4 (107-293)||(6690235-6690419)
chr4 (104-293)||(43143584-43143771)
chr4 (114-293)||(30216742-30216919)
chr4 (107-291)||(50205079-50205261)
chr4 (104-281)||(42333788-42333963)
chr4 (113-293)||(48989317-48989495)
chr4 (143-293)||(44156670-44156818)
chr4 (107-293)||(10352884-10353068)
chr4 (124-293)||(25930708-25930875)
chr4 (148-293)||(35545977-35546120)
chr4 (124-293)||(36382346-36382512)
chr4 (125-293)||(20129311-20129477)
chr4 (107-293)||(26448036-26448219)
chr4 (107-293)||(29995983-29996167)
chr4 (127-290)||(29319708-29319869)
chr4 (218-293)||(6235612-6235687)
chr4 (107-293)||(28877250-28877434)
chr4 (125-293)||(26439279-26439445)
chr4 (125-293)||(34407284-34407450)
chr4 (125-293)||(47500774-47500940)
chr4 (110-204)||(30109942-30110036)
chr4 (125-293)||(13012189-13012355)
chr4 (218-293)||(1817809-1817884)
chr4 (218-281)||(13392893-13392956)
chr4 (218-281)||(13396032-13396095)
chr4 (137-290)||(40529028-40529179)
chr4 (125-293)||(43355905-43356071)
chr4 (104-204)||(48129950-48130046)
chr4 (148-293)||(17511233-17511377)
chr4 (107-293)||(30077631-30077814)
chr4 (107-161)||(49908782-49908836)
chr4 (149-202)||(6254569-6254622)
chr4 (104-165)||(7769308-7769369)
chr4 (124-204)||(27363361-27363441)
chr4 (113-204)||(45194165-45194256)
chr4 (107-161)||(5517494-5517548)
chr4 (21-103)||(9417460-9417541)
chr4 (107-160)||(17554979-17555032)
chr4 (259-293)||(30110108-30110142)
chr4 (259-293)||(48130111-48130145)
chr4 (107-160)||(6212029-6212082)
chr4 (107-172)||(13392989-13393054)
chr4 (107-172)||(13396128-13396193)
chr4 (108-161)||(50720476-50720529)
[»] chr8 (17 HSPs)
chr8 (107-293)||(23402091-23402275)
chr8 (120-293)||(16788025-16788196)
chr8 (104-293)||(4403988-4404175)
chr8 (104-293)||(34136825-34137012)
chr8 (107-293)||(2729196-2729380)
chr8 (113-293)||(36408540-36408718)
chr8 (138-293)||(3648794-3648947)
chr8 (124-290)||(15838286-15838449)
chr8 (124-293)||(29728386-29728553)
chr8 (146-280)||(9877242-9877374)
chr8 (125-293)||(39914516-39914681)
chr8 (218-293)||(42231029-42231104)
chr8 (20-103)||(21692224-21692306)
chr8 (143-204)||(3435288-3435349)
chr8 (147-203)||(40470581-40470637)
chr8 (259-293)||(40470475-40470509)
chr8 (116-199)||(10397132-10397215)
[»] scaffold0502 (1 HSPs)
scaffold0502 (124-293)||(5230-5397)
[»] chr1 (16 HSPs)
chr1 (104-293)||(35907532-35907719)
chr1 (107-292)||(17445296-17445479)
chr1 (107-293)||(321377-321561)
chr1 (107-293)||(3828967-3829150)
chr1 (128-290)||(7433449-7433609)
chr1 (143-293)||(42310941-42311089)
chr1 (125-293)||(26144256-26144422)
chr1 (124-293)||(32982056-32982223)
chr1 (107-204)||(41972362-41972458)
chr1 (107-204)||(33489670-33489767)
chr1 (97-160)||(44352614-44352677)
chr1 (107-161)||(31866960-31867014)
chr1 (259-293)||(33489839-33489873)
chr1 (139-201)||(35951435-35951497)
chr1 (259-293)||(41972256-41972290)
chr1 (107-189)||(48901207-48901288)
[»] scaffold0154 (1 HSPs)
scaffold0154 (107-293)||(31463-31647)
[»] scaffold0041 (1 HSPs)
scaffold0041 (140-293)||(52941-53092)
[»] scaffold0069 (1 HSPs)
scaffold0069 (124-293)||(17842-18009)
[»] scaffold0002 (1 HSPs)
scaffold0002 (125-293)||(480457-480623)
[»] scaffold2142 (1 HSPs)
scaffold2142 (125-293)||(523-689)
[»] scaffold0769 (1 HSPs)
scaffold0769 (107-179)||(1260-1332)
[»] scaffold0012 (1 HSPs)
scaffold0012 (117-179)||(194021-194083)


Alignment Details
Target: chr7 (Bit Score: 122; Significance: 1e-62; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 34389243 - 34389056
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||    
T  34389243 catgggcgatttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacactta 34389144  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  34389143 c--aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattatcgacgggttcatctc 34389056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 37002328 - 37002144
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||      
T  37002328 gggcggtttcaccgcccggcgaccccgggcggtcgttcggtctcgatcgataatttttgcacattagacccaatccaaaagtcaattaacacacttac-- 37002231  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  37002230 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 37002144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 26624728 - 26624913
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgat-cgataatttttgcacattagacccaatccaaaagccaattaacacacttacn 205  Q
    ||||| |||||||||||||| |||||||| ||||| | ||||||||| |||||||||||||| |||||||||||||||||||  |||||||||||||||     
T  26624728 gggcggtttcaccgcccggcaaccccgggcggtcgcctgggctcgattcgataatttttgcatattagacccaatccaaaagttaattaacacacttaca 26624827  T
Q  206 nnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
                ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  26624828 aaaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 26624913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 113 - 291
Target Start/End: Complemental strand, 8867909 - 8867733
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnn 212  Q
    ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| ||||            
T  8867909 tttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcatattagacccaatccaaaagccaattaatacatttac--aaaaag 8867812  T
Q  213 nnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 291  Q
         ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  8867811 aaaaatttgggcaatcggaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatc 8867733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 137 - 293
Target Start/End: Original strand, 35090181 - 35090335
Alignment:
Q  137 ggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaatt 236  Q
    ||||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||             |||||| ||||||||||||    
T  35090181 ggtcgcccgggctcgatcaataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaaa--tttgggtaatctgaaaatt 35090278  T
Q  237 ctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  35090279 ctcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 35090335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 140 - 292
Target Start/End: Complemental strand, 38638387 - 38638237
Alignment:
Q  140 cgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctc 239  Q
    |||||| ||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||||||             ||||||||||||||||||||||    
T  38638387 cgtccgagctcgattgataatttttgcacattagatccaacccaaaagtcaattaacacacttacaaaaagaaaaa--tttgggcaatctgaaaattctc 38638290  T
Q  240 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38638289 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 38638237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 7002708 - 7002892
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||||||||  ||||||  |||||| |||||| |||||||||||||||||||| |||      
T  7002708 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7002807  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7002808 aaataaaaa--tttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7002892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 7048579 - 7048763
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||| | ||||| ||||||||||||||  ||||||  |||||| |||||| |||||||||||||||||||| |||      
T  7048579 gggcggtttcaccgcccggcgaccccgagcggtcgcccgggctcgatcgacgatttttctacattacacccaacccaaaagccaattaacacacatacaa 7048678  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||| |||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7048679 aaataaaaa--tttggacaatctaaaaattctcacacgcaaataggtcacggaattttatttagcacactattgacgggttcatctc 7048763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 33685547 - 33685731
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||||||||||| ||  ||||  ||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||||||      
T  33685547 gggcggtttcaccgcccggcgaccccaggcagtcgctcgggctcgatcgataatttttgcacattaaacccaacccaaaagcccattaacacacttac-- 33685644  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||| ||||||||| |||||  ||||||||||||||||||||||||||||| |||||    
T  33685645 aaaaagaaaaatttgggcaatctgaaaattctcatacgcaaatatgtctcataattttatttagcacactattgacgggtttatctc 33685731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 43184652 - 43184468
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||  ||||| |||||  ||||||||||||||||||||| | ||| ||||  || ||||||||||||||||| ||||||      
T  43184652 gggcggtttcaccgcccggcgattccgggcggtcgctcgggctcgatcgataatttttacgcatcagacttaacccaaaagccaattaacatacttacaa 43184553  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  43184552 aaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 43184468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 5555487 - 5555651
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| |||||| || ||||             ||||||    
T  5555487 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacgcatttacaaaaagaaaaa--tttggg 5555584  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  5555585 caatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 5555651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 143 - 293
Target Start/End: Original strand, 36658200 - 36658348
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    |||| |||||||||||||||||||||||| ||||||| | ||||||||||||||| ||| ||             |||||||||||||||||||||||||    
T  36658200 ccggactcgatcgataatttttgcacattggacccaaccgaaaagccaattaacatactaacaaaaataaaaa--tttgggcaatctgaaaattctcaca 36658297  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36658298 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 36658348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 293
Target Start/End: Complemental strand, 40920154 - 40920003
Alignment:
Q  140 cgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctc 239  Q
    |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||             ||||| ||||||||||||||||    
T  40920154 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaa--tttggacaatctgaaaattctc 40920057  T
Q  240 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  40920056 acatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 40920003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 3114260 - 3114099
Alignment:
Q  127 gaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaa 226  Q
    ||||||||  ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             |||||||||    
T  3114260 gaccccggacggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttgggcaa 3114163  T
Q  227 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    |||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  3114162 tctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 3114099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 8394125 - 8394292
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||| || ||| | ||||| | ||||||||| ||||             ||||||    
T  8394125 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaggaaaaa--tttggg 8394222  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  8394223 caatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacgggtttatctc 8394292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 36630816 - 36630983
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||  ||||| |||||||||||||||||||||||||||||| || ||| | ||||| | ||||||||| ||||             ||||||    
T  36630816 ggcgaccccggacggtcgcccgggctcgatcgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaaagaaaaa--tttggg 36630913  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  36630914 caatctgaaaattgtcacacgcaaataggtcttggaattttagttagcacactattgacgggttcatctc 36630983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 125 - 291
Target Start/End: Complemental strand, 14777273 - 14777109
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||| ||||             |||||||    
T  14777273 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaa--tttgggc 14777176  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 291  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||    
T  14777175 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatc 14777109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 20 - 101
Target Start/End: Original strand, 28958468 - 28958548
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcat 101  Q
    ||||||||| ||||| ||| ||||||| ||| |||| |||||||| ||||||||||| || |||||||||||||||||||||    
T  28958468 caaaggatagatttagctacttactttcatagtagctttgcaaaa-atggaagaaaatatgaagattcatgacaagattcat 28958548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 121 - 169
Target Start/End: Complemental strand, 10876877 - 10876829
Alignment:
Q  121 cccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcaca 169  Q
    |||||||| |||| ||||||| |||||||||||||||||||||||||||    
T  10876877 cccggcgaacccgtgtggtcgcccgggctcgatcgataatttttgcaca 10876829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 20 - 96
Target Start/End: Original strand, 27954656 - 27954731
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaaga 96  Q
    ||||||||| ||||| ||| ||||||| ||| ||||||||| |||| |||||||||| || ||||||||||||||||    
T  27954656 caaaggatagatttagctacttactttcatagtagccttgcgaaaa-tggaagaaaagatgaagattcatgacaaga 27954731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 27951419 - 27951489
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatga 91  Q
    ||||||||| ||||| ||| ||||||| ||| ||||||||| ||||||||||||||| || |||||||||||    
T  27951419 caaaggatagatttagctacttactttcatagtagccttgc-aaaaatggaagaaaagatgaagattcatga 27951489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 108 - 160
Target Start/End: Complemental strand, 37966666 - 37966614
Alignment:
Q  108 ggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    |||| |||||||||||||||||| | || ||||||||| ||||||||||||||    
T  37966666 ggcggtttcaccgcccggcgacctcaggcggtcgtccgagctcgatcgataat 37966614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 10868490 - 10868456
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||| ||||||||||||||||    
T  10868490 aattttatttagcacacttttgacgggttcatctc 10868456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Original strand, 26502810 - 26502887
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||||||| ||  |||| ||||||||||||||   |||||||| ||||  ||||| ||||||||| |||||||||||    
T  26502810 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacact 26502887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 201
Target Start/End: Complemental strand, 26589904 - 26589827
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||||||| ||  |||| ||||||||||||||   |||||||| ||||  ||||| ||||||||| |||||||||||    
T  26589904 ggcgaccccaggcagtcgcccgggctcgatcgaatttttttgcatattaagcccaacccaaaagcccattaacacact 26589827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 119; Significance: 8e-61; HSPs: 22)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 45182964 - 45183148
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||      
T  45182964 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttac-- 45183061  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  45183062 aaaaagaaaaatttgggcaatctgaaaattctcacacacaaataggtctcggaattttatttagcacactattgacgggttcatctc 45183148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 11018399 - 11018212
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| |||||||| |||||||| ||||| ||||| || |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  11018399 catgggcggtttcaccgtccggcgactccgggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 11018300  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||    
T  11018299 c--aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcagaattttatttagcacacaattgacgggttcatctc 11018212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 6931078 - 6930894
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||  ||||| |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||| ||||      
T  6931078 gggcggtttcaccgcccggcgaccccggacggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacatttacaa 6930979  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6930978 aaagaaaaa--tttaggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 6930894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 33040936 - 33041120
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| |||||  |||||||||| ||||||||||||| ||||||||||| |||||||| |||||||||||||||      
T  33040936 gggcggtttcaccgcccggcgaccccgggcggtcgctcgggctcgattgataatttttgcatattagacccaacccaaaagctaattaacacacttac-- 33041033  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||  |||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33041034 aaaaagaaaaatttgaacaatttgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33041120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 6503756 - 6503569
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| |||||||| |||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||| ||| |||||||||||||| ||||||||    
T  6503756 catgggcggtttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgattatttttgcaaattagactcaacccaaaagccaattagcacactta 6503657  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             |||  |||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||| |||||||||||    
T  6503656 c--aaaaagaaaaatttaagcaatctgaaaattctcacaggcaaataggtctcggatttttatttagcacacaattgatgggttcatctc 6503569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 27935158 - 27935345
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||| | |||||||||| ||| |||| |||  |||| |||||||||||||||||||||||||||||| |||||| ||||||||  |||||||||||||    
T  27935158 catgggtggtttcaccgcctggcaaccctgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaacccaaaagctcattaacacactta 27935257  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             ||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  27935258 caaaaagaaaaa--tttgggcaatctgaaaattctcatacgaaaataggtctcggaattttatttagcatactattgacgggttcatctc 27935345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 125 - 292
Target Start/End: Complemental strand, 6269592 - 6269427
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    |||| |||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             |||||||    
T  6269592 gcgatcccgggcggtcgtccggactcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttgggc 6269495  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
    |||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | |||||||    
T  6269494 aatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatct 6269427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 19390146 - 19390313
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||| ||| | ||||| | ||||||||| ||||             ||||||    
T  19390146 ggcgaccccgggcggtcgtccgggttcgatcgataatttttgcacattagactcaacctaaaagtctattaacacatttacaaaaagaaaaa--tttggg 19390243  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  19390244 caatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 19390313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 22968610 - 22968444
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||  || ||||||||| ||||||||| ||||             |||||||    
T  22968610 gcgaccccgggcggtcgtccgggctcgatcgataatttttgcacattagacttaacccaaaagcccattaacacatttac--aaaaagaaaaatttgggc 22968513  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||| |||||| ||||||| |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  22968512 aatctaaaaattgtcacacgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 22968444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 277
Target Start/End: Complemental strand, 19565685 - 19565517
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||||||| |||||| ||||| ||||| || |||||||||||||||||||||||||||| | ||||  | ||||||||| ||||      
T  19565685 gggcggtttcaccgcccggcgatcccgggcggtcgcccgggttcaatcgataatttttgcacattagacccaaccaaaaaatccattaacacatttacaa 19565586  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 277  Q
               ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  19565585 aaagaaaaa--tttggacaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacacta 19565517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 113 - 293
Target Start/End: Original strand, 35514255 - 35514429
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnn 212  Q
    ||||||||||||||||||||||  ||||||||||||||||||||||||||| ||| | |||| |||| ||||||| | ||||||||||  |             
T  35514255 tttcaccgcccggcgaccccggacggtcgtccgggctcgatcgataattttcgcatactagatccaacccaaaagtccattaacacacaaa------aag 35514348  T
Q  213 nnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
         ||||| |||| ||||||||||||| ||||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  35514349 aaaaatttggacaatatgaaaattctcactcgcaaataggtctaggaattttattttgcacactattgacgggttcatctc 35514429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 45335858 - 45336041
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||||||||| |||| ||||| |||| ||| ||||||||||||| |||||||||||||| | ||||| || |||||||| ||||      
T  45335858 gggcggtttcaccgcccggcgacctcgggcggtcgcccggactcaatcgataatttttacacattagacccaaccaaaaagtca-ttaacacatttacaa 45335956  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               | ||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||| || ||| ||||||||    
T  45335957 aaagaaaaa--tctgggcaatctgaaaattcttacacgcaaataggtcttggaattttatttagcacactagtgccggattcatctc 45336041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 34084289 - 34084122
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||| ||||||||||||||||||||||||| |  ||| | ||||| | ||||||||| ||||             ||||||    
T  34084289 ggcgaccccgggcggtcgcccggactcgatcgataatttttgcacattaaattcaaccaaaaagtccattaacacatttacaaaaagaaaaa--tttggg 34084192  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||| |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||    
T  34084191 caatatgaaaattatcacacgcaaataggtcttggaattttatttagcacactattgatgggttcatctc 34084122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 39771791 - 39771957
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| |||              |||||||    
T  39771791 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta--taaaaagaaaaatttgggc 39771888  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  39771889 aatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 39771957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 137 - 293
Target Start/End: Complemental strand, 40081893 - 40081741
Alignment:
Q  137 ggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaatt 236  Q
    ||||| ||||||||||||||||||||||| ||||||||| ||| ||||||||  ||||||||| ||||             |||||||||| ||||||||    
T  40081893 ggtcgcccgggctcgatcgataatttttgaacattagactcaa-ccaaaagctcattaacacatttacaaaaagaaaaa--tttgggcaatttgaaaatt 40081797  T
Q  237 ctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
     |||||||||||||| ||| ||| |||| ||||||||||||||||||||||||||||    
T  40081796 gtcacacgcaaatagatcttggattttt-tttagcacactattgacgggttcatctc 40081741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 6890981 - 6891035
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatt 161  Q
    ||||| ||||||||||||||||| ||||| ||||| |||||||||||||||||||    
T  6890981 gggcggtttcaccgcccggcgacaccgggcggtcgcccgggctcgatcgataatt 6891035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 41 - 103
Target Start/End: Complemental strand, 25805100 - 25805039
Alignment:
Q  41 tacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcatga 103  Q
    |||||| ||| |||||||||||||| |||||||||| || |||||||||||||||||||||||    
T  25805100 tactttcatagtagccttgcaaaaa-tggaagaaaagatgaagattcatgacaagattcatga 25805039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 140 - 204
Target Start/End: Original strand, 5135285 - 5135349
Alignment:
Q  140 cgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||| |||||||||||| ||||||| ||||||||||||| | ||||||  ||||||||||||||    
T  5135285 cgtccaggctcgatcgattatttttgtacattagacccaacctaaaagctcattaacacacttac 5135349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 173
Target Start/End: Original strand, 5354698 - 5354758
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattag 173  Q
    ||||||||||||||||||||||| ||||| ||||||||||||  |||||||  ||||||||    
T  5354698 tttcaccgcccggcgaccccgggcggtcgcccgggctcgatccttaattttctcacattag 5354758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 22922214 - 22922262
Alignment:
Q  245 caaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||| ||| ||||||||||||| |||||||||||||||||||||||    
T  22922214 caaatagatcttggaattttatttaacacactattgacgggttcatctc 22922262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 5135421 - 5135455
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  5135421 aattttatttagcacactattgacgggttcatctc 5135455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 22922157 - 22922205
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacatta 172  Q
    ||||| |||||| |||||  |||||||||||||| ||||||||||||||    
T  22922157 ggcgatcccgggcggtcgctcgggctcgatcgatcatttttgcacatta 22922205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 115; Significance: 2e-58; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 31680350 - 31680534
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||      
T  31680350 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttccgcattagacccaacccaaaagccaattaacacacttac-- 31680447  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31680448 aaaaagaaaaatttgggcaatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 31680534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 12279044 - 12278860
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||||||| |||||| ||||| |||| |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||      
T  12279044 gggcggtttcaccgcccggcgatcccgggcggtcgcccggactcgatcgataatttttgcacattagacccaacccaaaggccaattaacacacttacaa 12278945  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  12278944 aaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacaggttcatctc 12278860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 17332735 - 17332551
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| | ||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||      
T  17332735 gggcggtttcaccgcccggcgaccccgggcgttcgcccgggctcgatcgataatttttgcatattagacccaacccaaaagccaattaacacacttac-- 17332638  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17332637 aaaaagaaaaatttgggcaatctgaaaattttcacacgcaaataggtctcggaattttatttagcacactattgacggattcatctc 17332551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 37254621 - 37254808
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| ||||||||| |||||||||| || ||||| || |||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  37254621 catgggcggtttcaccgctcggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagacccaacccaaaagtcaattaacacactta 37254720  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  37254721 caaaaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatctc 37254808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 31501900 - 31501716
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| | | | ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||      
T  31501900 gggcggtttcaccgcccggcgaccccgggcgattgcccgggctcgatcgataatttttgcacattagacccaacccaaaagccaattaacacacttac-- 31501803  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| | |||||||||    
T  31501802 aaaaagaaaaatttgggcaatctgaaaattctcgcacgcaaataggtctcgaaattttatttagcacactattgatgagttcatctc 31501716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 138 - 293
Target Start/End: Original strand, 33430335 - 33430488
Alignment:
Q  138 gtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattc 237  Q
    |||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||             ||||||||||||||||||||    
T  33430335 gtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaa--tttgggcaatctgaaaattc 33430432  T
Q  238 tcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33430433 tcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 33430488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 10033927 - 10034091
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||  | ||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  10033927 ggcgaccccggacgatcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 10034024  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  10034025 caatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 10034091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 13817977 - 13818144
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| |||||  |||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  13817977 ggcgaccccgggcggtcgctcgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 13818074  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||||||||||||||| |||| |||||||||||||||||||||||| |||||||    
T  13818075 caatctgaaaattgtcacacgcaaataggtcttggaaatttatttagcacactattgacgggctcatctc 13818144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 39657673 - 39657509
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    ||||||||| |  |||||| |||||||||| ||||||||||||||||||||| ||| ||||||||  ||||||||| ||||             ||||||    
T  39657673 ggcgaccccagacggtcgttcgggctcgattgataatttttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaa--tttggg 39657576  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  39657575 caatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 39657509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 36293788 - 36293621
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||| | |||||||||| |||||||||||||||||| ||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  36293788 ggcgaccccgagcggtcgtccggactcgatcgataatttttgtacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 36293691  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||| || | ||||||||    
T  36293690 caatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactatttacagtttcatctc 36293621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 143 - 293
Target Start/End: Original strand, 16155016 - 16155164
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| |||              ||| ||||||||||||||| |||||    
T  16155016 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacattta--taaaaagaaaaatttaggcaatctgaaaattgtcaca 16155113  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||||||||||||||||||||||| | ||||||||    
T  16155114 cgcaaataggtcttggaattttatttagcacactattgacagattcatctc 16155164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 39434696 - 39434863
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||| ||| ||||| |||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  39434696 ggcgaccctgggcggtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttac--aaaatgaaaaatttggg 39434793  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||| | ||||||||||  ||||||||||||||||||||||||| | ||||||||    
T  39434794 caatctgaaaattgtcacatgtaaataggtctttgaattttatttagcacactattgacagtttcatctc 39434863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 36291354 - 36291538
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||| |||| ||||| ||||||||||| |||||| ||||||||||||||||||| | || | |||||   ||||||||| ||||      
T  36291354 gggcggtttcaccgcccgccgactccgggcggtcgtccgggttcgatcaataatttttgcacattagatctaacctaaaagttcattaacacatttacaa 36291453  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||| |||||| | |||| |||||||||||| |||||||||||| |||||||||||||||||||||||    
T  36291454 aaagaaaaa--tttgggcaatctcaaaattattacacacaaataggtctcagaattttatttaacacactattgacgggttcatctc 36291538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 154 - 290
Target Start/End: Complemental strand, 16334013 - 16333879
Alignment:
Q  154 cgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggt 253  Q
    |||||||||||||||||||||  ||| ||||||||| ||||||||| ||||             ||||||||||||||||||| ||||||||||||||||    
T  16334013 cgataatttttgcacattagattcaacccaaaagcccattaacacatttac--aaaaagaaaaatttgggcaatctgaaaattgtcacacgcaaataggt 16333916  T
Q  254 ctcggaattttatttagcacactattgacgggttcat 290  Q
    || |||||||||||||||||||||||||||| |||||    
T  16333915 cttggaattttatttagcacactattgacggattcat 16333879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 141 - 293
Target Start/End: Original strand, 43068894 - 43069044
Alignment:
Q  141 gtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctca 240  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||| | ||||||||| ||||             ||||||||||||||||||||| |    
T  43068894 gtccgggctcgatcaataattttttcacattagacccaacccaaaagtccattaacacatttacaaaaagaaaaa--tttgggcaatctgaaaattctta 43068991  T
Q  241 cacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    || | ||||| ||||||||||||||||||||||||||||| ||| ||||||||    
T  43068992 catgtaaataagtctcggaattttatttagcacactattgccggattcatctc 43069044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 126 - 292
Target Start/End: Complemental strand, 1776541 - 1776377
Alignment:
Q  126 cgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggca 225  Q
    |||||||||| ||||| ||||||||||||||||||||||| |||||| |  ||| | ||||| | ||||||||| ||||             ||||||||    
T  1776541 cgaccccgggcggtcgcccgggctcgatcgataatttttgtacattaaagtcaaccaaaaagtccattaacacatttacaaaaagaaaaa--tttgggca 1776444  T
Q  226 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
    || |||||||| |||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  1776443 atttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactatcgacaggttcatct 1776377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 26283484 - 26283318
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    |||||| |||| ||||| ||||||||||||||||||||||||||||||||| ||| | |||||   ||||||||| |||              |||||||    
T  26283484 gcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta--taaaaagaaaaatttgggc 26283387  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26283386 aatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26283318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 126 - 293
Target Start/End: Original strand, 19985941 - 19986106
Alignment:
Q  126 cgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggca 225  Q
    ||||| |||| ||||||||| ||||||||||||||||||||||||||||  ||| ||||||| | |||| |||| ||||             |||||| |    
T  19985941 cgacctcgggcggtcgtccgagctcgatcgataatttttgcacattagattcaacccaaaagtccattagcacatttacaaaaagaaaaa--tttgggta 19986038  T
Q  226 atctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||| |||||| |||||||||||||||||| | ||||||||||| |||||||||||| ||||||||||    
T  19986039 atctaaaaattatcacacgcaaataggtcttgaaattttatttaacacactattgacaggttcatctc 19986106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 135 - 204
Target Start/End: Original strand, 28801298 - 28801367
Alignment:
Q  135 gtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||| || ||||||||||||||||||||||||||||| |||| ||||||||| ||||||||||||||    
T  28801298 gtggtcgccctggctcgatcgataatttttgcacattagatccaaaccaaaagcccattaacacacttac 28801367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 218 - 277
Target Start/End: Complemental strand, 3155706 - 3155647
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacta 277  Q
    ||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||    
T  3155706 tttggacaatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacacta 3155647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 201
Target Start/End: Original strand, 202622 - 202716
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||| |||||||||||| ||||||  |||||||| |||||||||||||||||||| || |||||||  | || ||||||||| ||||| |||||    
T  202622 gggcggtttcaccgcccgacgaccctaggtggtcgcccgggctcgatcgataatttgtgtacattaggtcgaacccaaaagcccattaagacact 202716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Complemental strand, 26543949 - 26543877
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaa 179  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||||||||||  ||||||   |||||||| |||||    
T  26543949 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaa 26543877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 124 - 203
Target Start/End: Complemental strand, 3155798 - 3155719
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    ||||| |||||| |||||  ||||||||||| |||||||||||||||| ||| ||| | ||||| | ||||||||| |||    
T  3155798 ggcgatcccgggcggtcgctcgggctcgatcaataatttttgcacattcgactcaacctaaaagtccattaacacattta 3155719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 115; Significance: 2e-58; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 45418566 - 45418750
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| |||| ||||||||||||||||||||||||      
T  45418566 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagatccaacccaaaagccaattaacacacttac-- 45418663  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  45418664 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctctgaattttatttagcacactattgacgggttcatctc 45418750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 44084787 - 44084603
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||||||||||||||  |||| |||||||||||||||||||||||||||||| ||||||||||||||   ||||||||||||||      
T  44084787 gggcggtttcaccgcccggcgaccccgggcagtcgcccgggctcgatcgataatttttgcacattaaacccaatccaaaagttcattaacacacttacaa 44084688  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  44084687 aaagaaaaa--tttgggcaatctgaaaattctcatacgcaaataggtctcagaattttatttagcacactattgacgggttcatctc 44084603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 107 - 292
Target Start/End: Original strand, 8147334 - 8147518
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||||||||||||||  |||||| ||||||||||||||||      
T  8147334 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcacattagacccaactcaaaagtcaattaacacacttac-- 8147431  T
Q  207 nnnnnnnnnnntttgggcaatctg-aaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
               ||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||    
T  8147432 aaaaagaaaaatttgggcaatctgaaaaattctcacacgcaaatagatctcggaattttatttaacacactattgacgggttcatct 8147518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 107 - 292
Target Start/End: Original strand, 770977 - 771165
Alignment:
Q  107 gggcgatttcaccgcccggcgacc-----ccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||| ||||||||||||||||||     ||||| ||||| ||||||||||||||||| ||||||||||||||||||| | ||||||| |||||||||||    
T  770977 gggcggtttcaccgcccggcgaccggatcccgggcggtcgcccgggctcgatcgataacttttgcacattagacccaaccaaaaagcccattaacacact 771076  T
Q  202 tacnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
    |||             ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  771077 tacaaaaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaactttatttagcacattattgacgggttcatct 771165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 12756985 - 12756837
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    ||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||             |||| ||||||||||||||||||||    
T  12756985 ccgggttcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttacaaaaagaaaaa--tttgagcaatctgaaaattctcaca 12756888  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  12756887 cgcaaataagtctcggaattttatttagcacactattgacgggttcatctc 12756837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 35962715 - 35962879
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    ||||||||| || ||||||||||||||||||||||||||||||||||||||| ||| ||||||||  ||||||||| ||||             ||||||    
T  35962715 ggcgaccccaggcggtcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcttattaacacatttacaaaaagaaaat--tttggg 35962812  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||||||||    
T  35962813 caatctgaaaattgtcacacacaaataggtcttggaattttatttagcacactattgacgggttcat 35962879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 127 - 293
Target Start/End: Complemental strand, 41251798 - 41251634
Alignment:
Q  127 gaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaa 226  Q
    ||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             |||||||||    
T  41251798 gaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttgggcaa 41251701  T
Q  227 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  41251700 tctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 41251634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 42439986 - 42440150
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||||||||||||||||||||||||  || ||||||||| ||||||||| ||||             ||||||    
T  42439986 ggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactaaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 42440083  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||| |||||    
T  42440084 caatctgaaaattgtcacacgcaaataggtcttgcaattttatttagcacactattgacggattcat 42440150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 290
Target Start/End: Complemental strand, 8059517 - 8059336
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||| |||||||||  | ||| || ||||| |||||||||||||||||||||||  ||| ||||||||||||||||||||||||      
T  8059517 gggcggtttcaccgcccgacgaccccggccgatcgcccaggctcaatcgataatttttgcacattagagtcaacccaaaagccaattaacacacttac-- 8059420  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
               ||||| |||| ||||||||||||||| ||||| ||||||||||||||||||||||||| ||||||||||||||    
T  8059419 aaaaagaaaaatttggccaatttgaaaattctcacacacaaatcggtctcggaattttatttagcacacaattgacgggttcat 8059336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 31581789 - 31581622
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    ||||||| |||| ||||| || ||||||| ||||| |||||||| ||||||| ||  ||||||||| ||||||||| ||||             ||||||    
T  31581789 ggcgaccacgggcggtcgcccaggctcgagcgatactttttgcatattagactcatcccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 31581692  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  31581691 caatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 31581622  T

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Target: chr2; HSP #11
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 32127308 - 32127144
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||| || | | ||||||||  ||||||||| ||||             ||| ||    
T  32127308 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattaaactcgacccaaaagctcattaacacatttacaaaaagaaaaa--tttagg 32127211  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||| ||| ||||||||||||||||||||||||||||||||||    
T  32127210 caatctgaaaattgtcacacgcaaatagatcttggaattttatttagcacactattgacgggttcat 32127144  T

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Target: chr2; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 130 - 290
Target Start/End: Original strand, 18981622 - 18981780
Alignment:
Q  130 cccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatct 229  Q
    |||||| ||||||||||||||||| ||||||||||||||||||||| ||| ||||||| | ||||| ||| ||||             |||||||||| |    
T  18981622 cccgggcggtcgtccgggctcgattgataatttttgcacattagactcaacccaaaagtccattaaaacatttacaaaaagaaaaa--tttgggcaattt 18981719  T
Q  230 gaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
     |||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  18981720 aaaaattgtcacacgcaaataggtcttggaattttatttagcacactgttgacgggttcat 18981780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 17445206 - 17445041
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    ||||||| |||| ||||| ||| ||||||||||||||||||||||  ||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  17445206 ggcgacctcgggcggtcgcccgagctcgatcgataatttttgcac--tagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 17445111  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||||| |||||||||| |||||||||||||||||||||||||| | ||||||||    
T  17445110 caatctgaaaattgtcacacgtaaataggtcttggaattttatttagcacactattgacagtttcatctc 17445041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 6403970 - 6403804
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | |||||   ||||||||| |||              |||||||    
T  6403970 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagttcattaacacattta--taaaaagaaaaatttgggc 6403873  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  6403872 aatctgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 6403804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 127 - 290
Target Start/End: Original strand, 16405603 - 16405764
Alignment:
Q  127 gaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaa 226  Q
    ||||| ||| ||||| |||||||| ||||||||||||||||| |||||| ||| ||||||||  ||||||||| |||              ||||| |||    
T  16405603 gaccctgggcggtcgcccgggctcaatcgataatttttgcacgttagactcaacccaaaagctcattaacacattta--taaaaagaaaaatttggacaa 16405700  T
Q  227 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    |||||||||| ||||||||||||| |||| ||||||||||||||||||||||||||||||||||    
T  16405701 tctgaaaattgtcacacgcaaataagtcttggaattttatttagcacactattgacgggttcat 16405764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 21 - 100
Target Start/End: Complemental strand, 2413013 - 2412935
Alignment:
Q  21 aaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattca 100  Q
    |||||||||||||| ||| |||||||||||||||||||||| ||||||||||||||||  ||||||||||||||||||||    
T  2413013 aaaggatatatttagctacttacttttataatagccttgca-aaaatggaagaaaaaacgaagattcatgacaagattca 2412935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 124 - 263
Target Start/End: Complemental strand, 2958267 - 2958131
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  2958267 ggcgaccccgggcggtcgtccgggctcgatcgataa-ttttgcacattagactcaacccaaaagcccattaacacatttac--aaagagaaaaatttggg 2958171  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattt 263  Q
     |||||||||||| |||||||||||||||||| |||||||    
T  2958170 taatctgaaaattgtcacacgcaaataggtcttggaattt 2958131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 218 - 290
Target Start/End: Original strand, 2285954 - 2286026
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    |||| |||||||||||||| |||||||||||||||| | ||||||||||||||||||||||||||| ||||||    
T  2285954 tttgagcaatctgaaaattgtcacacgcaaataggttttggaattttatttagcacactattgacgtgttcat 2286026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 31758413 - 31758331
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcatga 103  Q
    ||||||||| ||||| ||| ||||||| ||| |||||||||||||| |||||||||| || |||||||||||||||||||||||    
T  31758413 caaaggatagatttagctatttactttcatagtagccttgcaaaaa-tggaagaaaagatgaagattcatgacaagattcatga 31758331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 218 - 293
Target Start/End: Complemental strand, 26162774 - 26162702
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| |||||||||| || |||||||||||||||   |||||||||||| ||||||||||||||||||    
T  26162774 tttgggcaatctaaaaattctcaaacacaaataggtctcgga---ttatttagcacattattgacgggttcatctc 26162702  T

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Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 120 - 204
Target Start/End: Original strand, 26237953 - 26238036
Alignment:
Q  120 gcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    |||||||||||||||| ||||| ||||||||||||||| ||||||||| ||||||  ||| ||||||| | ||||||||||||||    
T  26237953 gcccggcgaccccgggcggtcgcccgggctcgatcgat-atttttgcaaattagatgcaaaccaaaagtccattaacacacttac 26238036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 144 - 203
Target Start/End: Original strand, 34905969 - 34906028
Alignment:
Q  144 cgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||||||||||||||||||||||||  || || ||||||||| |||||||||||||    
T  34905969 cgggctcgatcgataatttttgcacattaagcctaacccaaaagcccattaacacactta 34906028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 116 - 204
Target Start/End: Complemental strand, 4555385 - 4555298
Alignment:
Q  116 caccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||||||||| | |||| ||||| | || ||||||||||||||||||||||| | |||||| ||||||||   |||||||||||||    
T  4555385 caccgcccggcgatctcgggcggtcg-ctggactcgatcgataatttttgcacatcaaacccaacccaaaagctcgttaacacacttac 4555298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 137 - 200
Target Start/End: Complemental strand, 7072706 - 7072643
Alignment:
Q  137 ggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacac 200  Q
    ||||| ||||||||||||||||||||||  |||||| || ||| ||||||||| ||||||||||    
T  7072706 ggtcgcccgggctcgatcgataatttttttacattaaactcaacccaaaagcccattaacacac 7072643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 34523223 - 34523295
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaa 179  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||||||||||  ||||||   |||||||| |||||    
T  34523223 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaa 34523295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 263 - 293
Target Start/End: Original strand, 26238080 - 26238110
Alignment:
Q  263 ttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||    
T  26238080 ttatttagcacactattgacgggttcatctc 26238110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 111; Significance: 5e-56; HSPs: 13)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 28996713 - 28996897
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| ||| |||||||||||||||||||| |||||||||||| | ||||| ||||||||||||||||      
T  28996713 gggcggtttcaccgcccggcgaccccgggcggtcgcccgagctcgatcgataatttttgcgcattagacccaacctaaaagtcaattaacacacttacaa 28996812  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28996813 aaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 28996897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 18339106 - 18339273
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||             ||||||    
T  18339106 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaat--tttggg 18339203  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18339204 caatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 18339273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 29743266 - 29743450
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||| ||| ||| |||||| ||| | |||||||| |||||||||||||||||||||||||||| | |||||   ||||||||| ||||      
T  29743266 gggcggtttcaccgtccgacgatcccgggcggttgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagttcattaacacatttacag 29743365  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||| ||||||||    
T  29743366 aaagaaaaa--tttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacactagtgccggattcatctc 29743450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 290
Target Start/End: Complemental strand, 34948925 - 34948761
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    ||||||||| || ||||| || |||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  34948925 ggcgaccccaggcggtcgcccaggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 34948828  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||| ||||||| ||| | ||||||||||||||||||||||||||||||||    
T  34948827 caatctgaaaattgtcacacacaaatagatcttgaaattttatttagcacactattgacgggttcat 34948761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 13837821 - 13837985
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| | |||  |||| ||||||||||||||||| ||||||||| ||| ||||||||  || |||||| ||||             ||||||    
T  13837821 ggcgaccccgggcgatcgctcgggttcgatcgataatttttgtacattagactcaacccaaaagcacatcaacacatttacaaaaagaaaaa--tttggg 13837918  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  13837919 caatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 13837985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 398618 - 398784
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  398618 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta--taaaaagaaaaatttgggc 398715  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  398716 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 398784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 33229484 - 33229336
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    ||||||||||||||| ||||||| ||||||||||||| ||||||| | ||||||||| || |             ||||||||||||||||||||| |||    
T  33229484 ccgggctcgatcgatcatttttgtacattagacccaacccaaaagtccattaacacatttccaaaaagaaaaa--tttgggcaatctgaaaattcttaca 33229387  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    || ||||| ||||||| ||||||||||||||||||||| ||| ||||||||    
T  33229386 cgtaaataagtctcgggattttatttagcacactattgccggattcatctc 33229336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 24698000 - 24697904
Alignment:
Q  108 ggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    |||| ||||||||||||||||||||||    ||| |||||||| ||||||||||||| |||||||| ||||| ||||||||| ||||||||||||||    
T  24698000 ggcggtttcaccgcccggcgaccccggacactcgcccgggctcaatcgataattttttcacattaggcccaacccaaaagcccattaacacacttac 24697904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 113 - 204
Target Start/End: Complemental strand, 31028542 - 31028451
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||||||||||||||||| | ||| | |||| ||||||||||||||||||||||||||| |||| | ||||||  ||||||||| ||||    
T  31028542 tttcaccgcccggcgaccccgagcggttgcccggactcgatcgataatttttgcacattagatccaacctaaaagctcattaacacatttac 31028451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 20 - 103
Target Start/End: Original strand, 14354935 - 14355017
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcatga 103  Q
    ||||||||| ||||| ||| ||||||| ||| ||||||||||||| ||||||||||| || ||||||| |||||||||||||||    
T  14354935 caaaggatagatttagctacttactttcatagtagccttgcaaaa-atggaagaaaagatgaagattcgtgacaagattcatga 14355017  T

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Target: chr6; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 13647000 - 13647053
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    ||||| ||||||| ||||||||||||||| ||||| ||||||||||||||||||    
T  13647000 gggcggtttcaccacccggcgaccccgggcggtcgcccgggctcgatcgataat 13647053  T

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Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 34385572 - 34385519
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    ||||| ||||||||||||||||||||||| ||| | || |||||||||||||||    
T  34385572 gggcggtttcaccgcccggcgaccccgggcggttgccctggctcgatcgataat 34385519  T

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Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 201
Target Start/End: Original strand, 24072576 - 24072625
Alignment:
Q  152 atcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||||||||||||||||||||| | || |||||| || |||||||||||    
T  24072576 atcgataatttttgcacattagatcgaacccaaaaacccattaacacact 24072625  T

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Target: chr4 (Bit Score: 111; Significance: 5e-56; HSPs: 45)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 3293080 - 3292896
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||| | ||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||      
T  3293080 gggcggtttcaccgcccagtgaccccgggcggtcgcccgggctcgatcgataatttttgcccattagacccaacccaaaagccaattaacacacttacaa 3292981  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  3292980 aaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgagttcatctc 3292896  T

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Target: chr4; HSP #2
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 6690419 - 6690235
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||      
T  6690419 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcgcattagacccaacccaaaagccaattaacacacttac-- 6690322  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  6690321 aaaaagaaaaatttgggcaaactgaaaattctcacacgcaaataggtctcgaaattttatttagcacactattgacgggttcgtctc 6690235  T

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Target: chr4; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 43143771 - 43143584
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| |||||||| ||| |||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  43143771 catgggcggtttcaccgtccgacgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 43143672  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  43143671 c--aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 43143584  T

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Target: chr4; HSP #4
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 114 - 293
Target Start/End: Complemental strand, 30216919 - 30216742
Alignment:
Q  114 ttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnn 213  Q
    ||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||             
T  30216919 ttcaccgtccggcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagacccaacccaaaagctaattaacacacttac--aaaaaga 30216822  T
Q  214 nnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
        ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  30216821 aaaatttgggcaatctgaaaattctcacatgcaaatagatctcggaattttatttagcacactattgacgggttcatctc 30216742  T

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Target: chr4; HSP #5
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 107 - 291
Target Start/End: Complemental strand, 50205261 - 50205079
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||| ||||||| |||||| ||||| ||| |||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||      
T  50205261 gggcggtttcaccgtccggcgatcccgggcggtcgcccgagctcgatcgataatttttgcacattagatccaacccaaaagccaattaacacacttacaa 50205162  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatc 291  Q
                |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  50205161 aaagaaaaaa--ttggacaatctgaaaattctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatc 50205079  T

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Target: chr4; HSP #6
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 42333963 - 42333788
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    ||||| || |||||||| || |||| |||||| |||||||||||||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||    
T  42333963 catggacggtttcaccgtccagcgatcccgggcggtcgtccgggctcaatcgataatttttgcacattagactcaacccaaaagccaattaacacactta 42333864  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 281  Q
    |             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  42333863 c--aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacacaattga 42333788  T

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Target: chr4; HSP #7
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 113 - 293
Target Start/End: Original strand, 48989317 - 48989495
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnn 212  Q
    |||||||||||| |||| ||||| ||||  ||||| |||||||||||||||||||||||| ||||||  |||||| | ||||||||||||||            
T  48989317 tttcaccgcccgacgactccgggcggtcaaccgggttcgatcgataatttttgcacattaaacccaactcaaaagtccattaacacacttacaaaaagaa 48989416  T
Q  213 nnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
         ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48989417 aaa--tttgggcaatctgaaaattctcatacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 48989495  T

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Target: chr4; HSP #8
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 143 - 293
Target Start/End: Original strand, 44156670 - 44156818
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    |||||||| | |||||||||||||||||||||||||| ||||||||||||||||||||||||             ||||| |||||||||||||||| ||    
T  44156670 ccgggctcaaccgataatttttgcacattagacccaacccaaaagccaattaacacacttacaaaaagaaaat--tttggacaatctgaaaattctctca 44156767  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44156768 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 44156818  T

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Target: chr4; HSP #9
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 10353068 - 10352884
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||| ||||||||||| || ||||| |||||||| |||||||||||||||||||||||||||| | ||||| | ||||||||| ||||      
T  10353068 gggcggtttcaccgtccggcgacccctggcggtcgcccgggctcaatcgataatttttgcacattagacccaaccaaaaagtccattaacacatttacaa 10352969  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| | || ||| ||||||||    
T  10352968 aaggaaaaa--tttgggcaatctgaaaattcttacacgcaaataggtctcggaattttatttagcacaccagtgtcggattcatctc 10352884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 25930708 - 25930875
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||| ||| ||||| |||||||||||| ||||||||||||||||| || ||| ||||||||| ||||||||| ||||             ||||||    
T  25930708 ggcgaccctgggcggtcgcccgggctcgatctataatttttgcacattaaactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttggg 25930805  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  25930806 caatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 25930875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 148 - 293
Target Start/End: Original strand, 35545977 - 35546120
Alignment:
Q  148 ctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaa 247  Q
    ||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||||||             ||||||||||||||||||||||||||||||    
T  35545977 ctcgatcgacaatttttgcgcatcagacccaacccaaaagccaattaacacacttacaaaaagaaaat--tttgggcaatctgaaaattctcacacgcaa 35546074  T
Q  248 ataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    || |||||| |||||||||||||||||||||||| |||||||||||    
T  35546075 atgggtctctgaattttatttagcacactattgatgggttcatctc 35546120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 36382512 - 36382346
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||| ||||||||||||||||| || ||| | ||||| | ||||||||| ||||             |||||     
T  36382512 ggcgaccccgggcggtcgcccgggctcgatccataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaagaaaaa---tttgga 36382416  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  36382415 caatctgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 36382346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 20129311 - 20129477
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             |||||||    
T  20129311 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttac--aaaaagaaaaatttgggc 20129408  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| ||||||||||  ||||||||||| ||||||||||||| | ||||||||    
T  20129409 aatctgaaaattgtcacacgtaaataggtcttagaattttatttggcacactattgacagtttcatctc 20129477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 26448036 - 26448219
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||| ||| | | |||||||| ||||||||||||||||||||||||| | | || ||||||| | ||||||||||||||      
T  26448036 gggcggtttcaccgcccggcgactccgtgcgatcgtccggactcgatcgataatttttgcacattaaatctaacccaaaagtccattaacacacttacaa 26448135  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||| || ||||||||| |||||||||||||||||||||||||| ||| || |||||    
T  26448136 aaaaaaaa---tttgggcaatctgaaaattctcatacacaaataggtttcggaattttatttagcacactattggcggatttatctc 26448219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 29996167 - 29995983
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||| ||| |||||  |||||||||| |||||||||||||||||| ||||||||| ||| | ||||| | ||||||||| ||||      
T  29996167 gggcggtttcaccgcccgacgatcccggacggtcgtccggactcgatcgataatttttgtacattagactcaaccaaaaagtccattaacacatttacga 29996068  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||  ||||||||||| ||||||||||||||| |||||||||||||||| ||||||||    
T  29996067 aaagaaaaa--tttgggcaatctgaaaattcttgcacgcaaatagttctcggaattttattaagcacactattgacggattcatctc 29995983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 127 - 290
Target Start/End: Complemental strand, 29319869 - 29319708
Alignment:
Q  127 gaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaa 226  Q
    |||||| || |||||||| |||||||||||||||||||||||||||||| ||| |||||| || ||||||||| ||||             |||| ||||    
T  29319869 gacccctggcggtcgtccaggctcgatcgataatttttgcacattagactcaacccaaaatcccattaacacatttacaaaaagaaaaa--tttgagcaa 29319772  T
Q  227 tctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    |||||||||| |||||| |||||| |||| ||||||||||||||||||||||||||||||||||    
T  29319771 tctgaaaattgtcacacacaaataagtcttggaattttatttagcacactattgacgggttcat 29319708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 6235612 - 6235687
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6235612 tttgggcaatttgaaaattgtcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 6235687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 28877434 - 28877250
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||| |||  ||||||| | |||||   ||||| ||||||||||||||||||||||||  ||| | |||||| ||||||||| ||||       
T  28877434 gggcggtttcaccgtccgatgaccccgtgcggtcgcttgggctagatcgataatttttgcacattagattcaacctaaaagctaattaacacgctta--t 28877337  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28877336 aaaaagaaaaatttgggaaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacactattgatgggttcatctc 28877250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 26439445 - 26439279
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| |||              |||||||    
T  26439445 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta--taaaaagaaaaatttgggc 26439348  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  26439347 aatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 26439279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 34407450 - 34407284
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| |||              |||||||    
T  34407450 gcgaccccgggcggtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta--taaaaagaaaaatttgggc 34407353  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  34407352 aatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 34407284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 47500774 - 47500940
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  47500774 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta--tgaaaagaaaaatttgggc 47500871  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  47500872 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 47500940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 110 - 204
Target Start/End: Original strand, 30109942 - 30110036
Alignment:
Q  110 cgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||||||||||| |||||||||  ||||| |||| |||||||||||||||||||||||||||||||| || |||| | ||||||||||||||    
T  30109942 cgatttcaccgcccgacgaccccggacggtcgcccggactcgatcgataatttttgcacattagacccaaacccaaagaccattaacacacttac 30110036  T

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Target: chr4; HSP #23
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 13012189 - 13012355
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||  ||| | ||||||  ||||||||| |||              |||||||    
T  13012189 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagattcaaccaaaaagctcattaacacattta--taaaaagaaaaatttgggc 13012286  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  13012287 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 13012355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 1817809 - 1817884
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||| |||||||||| ||| ||||||||    
T  1817809 tttgggcaatctaaaaattcttacacgcaaataggtctcggaattttatttaacacactattgtcggattcatctc 1817884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 13392956 - 13392893
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 281  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13392956 tttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13392893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 281
Target Start/End: Complemental strand, 13396095 - 13396032
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattga 281  Q
    |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  13396095 tttgggcaatctaaaaattctcacacgcaaataggtctcgaaattttatttagcacactattga 13396032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 137 - 290
Target Start/End: Original strand, 40529028 - 40529179
Alignment:
Q  137 ggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaatt 236  Q
    |||||||||| ||||||||||||||||||||||||| || ||| | |||| |  ||||||||| ||||             ||||| |||| ||||||||    
T  40529028 ggtcgtccggactcgatcgataatttttgcacattaaactcaacctaaaaactcattaacacatttacaaaaagaaaaa--tttggacaatttgaaaatt 40529125  T
Q  237 ctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
     ||||| |||||||||||| ||||||||||||||||||||||||||||||||||    
T  40529126 gtcacatgcaaataggtcttggaattttatttagcacactattgacgggttcat 40529179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 43355905 - 43356071
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    |||||||| ||  |||| ||||||||| ||||||||||||||||||||||| ||| ||||||||| ||||||||| |||              |||||||    
T  43355905 gcgaccccaggcagtcgcccgggctcggtcgataatttttgcacattagactcaacccaaaagcccattaacacattta--taaaaagaaaaatttgggc 43356002  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||| ||||||| |||||||||| | ||||||||||  |||||||||||| | ||||||||    
T  43356003 aatctgaaaattgtcacacgtaaataggtcttgaaattttatttgacacactattgacagtttcatctc 43356071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 104 - 204
Target Start/End: Original strand, 48129950 - 48130046
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| ||| |||||||||||||| |||    ||| ||||||||||||||||||||||||| ||||||||||| ||||||||  |||||||||||||    
T  48129950 catgggcggtttaaccgcccggcgacctcgg----tcgaccgggctcgatcgataatttttgcatattagacccaacccaaaagctcattaacacactta 48130045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 148 - 293
Target Start/End: Complemental strand, 17511377 - 17511233
Alignment:
Q  148 ctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaa 247  Q
    |||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             |||||||||| |||||||| | ||||||||    
T  17511377 ctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaaa--tttgggcaatttgaaaattgttacacgcaa 17511280  T
Q  248 ataggtctcgg-aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||| || |||||||||||||||| ||||||  ||||||||||    
T  17511279 ataggtcttggaaattttatttagcacattattgatcggttcatctc 17511233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 30077814 - 30077631
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||||||||| ||||| |||| ||||| || ||||| |||||||| ||||||||||||||||||| | |||||   ||||||||| ||||      
T  30077814 gggcggtttcaccgcccg-cgacctcgggcggtcgcccaggctcaatcgataaattttgcacattagacccaaccaaaaagttcattaacacatttacaa 30077716  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||| ||||||||||||| | |||| ||||||||||| | ||||||||||||||||||| || ||| ||||||||    
T  30077715 aaagaaaaa--tttggacaatctgaaaatttttacacacaaataggtcttgaaattttatttagcacactagtgccggattcatctc 30077631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 49908836 - 49908782
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatt 161  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||    
T  49908836 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatt 49908782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 149 - 202
Target Start/End: Original strand, 6254569 - 6254622
Alignment:
Q  149 tcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactt 202  Q
    |||||||||||||||||||||||| |||||| ||||||| ||||||||||||||    
T  6254569 tcgatcgataatttttgcacattaaacccaacccaaaagacaattaacacactt 6254622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 104 - 165
Target Start/End: Original strand, 7769308 - 7769369
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttg 165  Q
    |||||||| |||||||| ||||||||||| || ||||| |||||||||||||||||||||||    
T  7769308 catgggcggtttcaccgtccggcgaccccaggcggtcgcccgggctcgatcgataatttttg 7769369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 124 - 204
Target Start/End: Original strand, 27363361 - 27363441
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||| |||| ||||| ||||||||||||||   |||||||| ||||| ||||| ||||||||| ||||||||||||||    
T  27363361 ggcgacctcgggcggtcgcccgggctcgatcgaatttttttgcatattaggcccaacccaaaagcccattaacacacttac 27363441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 113 - 204
Target Start/End: Original strand, 45194165 - 45194256
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    |||||||||||| ||||||| || | | | |||| ||||||| ||||||||||||||||| || ||| ||||||| | ||||||||||||||    
T  45194165 tttcaccgcccgacgaccccaggcgattgcccggactcgatcaataatttttgcacattaaactcaacccaaaagtccattaacacacttac 45194256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 107 - 161
Target Start/End: Complemental strand, 5517548 - 5517494
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatt 161  Q
    ||||| ||||||||||||||||||||||| ||||| | |||||||||||||||||    
T  5517548 gggcggtttcaccgcccggcgaccccgggcggtcgcctgggctcgatcgataatt 5517494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 21 - 103
Target Start/End: Original strand, 9417460 - 9417541
Alignment:
Q  21 aaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcatga 103  Q
    |||||||| ||||| ||||||||||| |||  |||||||||||| ||||||| ||| || ||||||||||| |||||||||||    
T  9417460 aaaggatagatttagctagttactttcatagcagccttgcaaaa-atggaaggaaagatgaagattcatgaaaagattcatga 9417541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 107 - 160
Target Start/End: Original strand, 17554979 - 17555032
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    ||||| |||||||| ||| |||||||||||||||| ||||||||||||||||||    
T  17554979 gggcggtttcaccgtccgacgaccccgggtggtcgcccgggctcgatcgataat 17555032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 30110108 - 30110142
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  30110108 aattttatttagcacactattgacgggttcatctc 30110142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 48130111 - 48130145
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  48130111 aattttatttagcacactattgacgggttcatctc 48130145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 160
Target Start/End: Complemental strand, 6212082 - 6212029
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    ||||| |||||||| ||||||||| |||| ||||| ||| ||||||||||||||    
T  6212082 gggcggtttcaccgtccggcgacctcgggcggtcgcccgagctcgatcgataat 6212029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 13393054 - 13392989
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacatta 172  Q
    ||||| ||||||||||| ||||||||||  ||||| |||||||| |||||| | ||||||| ||||    
T  13393054 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13392989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 107 - 172
Target Start/End: Complemental strand, 13396193 - 13396128
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacatta 172  Q
    ||||| ||||||||||| ||||||||||  ||||| |||||||| |||||| | ||||||| ||||    
T  13396193 gggcggtttcaccgcccagcgaccccggacggtcgcccgggctcaatcgatgacttttgcatatta 13396128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 108 - 161
Target Start/End: Complemental strand, 50720529 - 50720476
Alignment:
Q  108 ggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatt 161  Q
    |||| |||||||||||||||||| |||| ||||| |||||||| ||| ||||||    
T  50720529 ggcggtttcaccgcccggcgacctcgggcggtcgcccgggctcaatcaataatt 50720476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 107; Significance: 1e-53; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 23402091 - 23402275
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| ||||| |||||||||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||      
T  23402091 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggctcgatcgataatctttgcatattagacccaacccaaaagccaattaacacacttac-- 23402188  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||||||||||    
T  23402189 aaaaagaaaaatttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttaacacactattgactggttcatctc 23402275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 120 - 293
Target Start/End: Complemental strand, 16788196 - 16788025
Alignment:
Q  120 gcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntt 219  Q
    ||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||             ||    
T  16788196 gcccggcaaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacacacttac--aaaaagaaaaatt 16788099  T
Q  220 tgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  16788098 tgggcaatcttaaaactctcacacgcaaataggtcttggaattttatttagcacactattgacgggttcatctc 16788025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 4403988 - 4404175
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    ||||| || |||||| | ||||||||||| || ||||| ||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| |||||    
T  4403988 catggacggtttcactggccggcgaccccaggcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagccaattaacatactta 4404087  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||    
T  4404088 caaaaagaaaaa--tttgggcaatctaaaaattctcacacgcaaataggtctcggaattttatttagcacacaattgatgggttcatctc 4404175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 104 - 293
Target Start/End: Complemental strand, 34137012 - 34136825
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||| | |||||||| | |||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||    
T  34137012 catgggtggtttcaccgtctggcgaccccgagcggtcgcccgggctcgatcgataatttttgcacattagactcaacccaaaagtcaattaacacactta 34136913  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||    
T  34136912 caaaaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcgaaattttatttagcacacaattgatgggttcatctc 34136825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 2729380 - 2729196
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||||||||||||||||||| || || |||||||||||||||||||||| ||||||| | |||||||||||||| |||||||||||||       
T  2729380 gggcggtttcaccgcccggcgaccccgggcggacgcccgggctcgatcgataatttttacacattaaatccaatccaaaagcccattaacacactta--t 2729283  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||| |||||| |||||| ||||| |||||||||||||||  ||||||||||||||||||||||| || ||||||||    
T  2729282 aaaaagaaattttttggcaatttgaaaactctcatacgcaaataggtctcaaaattttatttagcacactattgatggattcatctc 2729196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 113 - 293
Target Start/End: Original strand, 36408540 - 36408718
Alignment:
Q  113 tttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnn 212  Q
    |||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||| |||| ||||||| | ||||||||| ||||            
T  36408540 tttcaccgcccggcgacctcgggcggtcgcccgggctcgatcgataatttttgcacattagatccaacccaaaagtccattaacacatttac--aaaaag 36408637  T
Q  213 nnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
         ||| |||||| |||||||||| |||||| |||||||||| |||||||||||| |||||||||| ||| ||||||||    
T  36408638 aaaatttttggcaatttgaaaattcttacacgctaataggtctcagaattttatttaacacactattgccggattcatctc 36408718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 138 - 293
Target Start/End: Complemental strand, 3648947 - 3648794
Alignment:
Q  138 gtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattc 237  Q
    |||| |||||||||||||||||||||| |||||||||| ||| ||||||||| ||||||||| ||||             |||||||||||||||||||     
T  3648947 gtcgcccgggctcgatcgataattttttcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaat--tttgggcaatctgaaaattg 3648850  T
Q  238 tcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||| ||||| | |||||||||||||||||||||||||||||||||||||    
T  3648849 tcacacgcaagtaggttttggaattttatttagcacactattgacgggttcatctc 3648794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 124 - 290
Target Start/End: Original strand, 15838286 - 15838449
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||  ||||||||||| |||||||||||||||||| || ||| | ||||| | ||||||||| ||||             ||||||    
T  15838286 ggcgaccccgggcggtcacccgggctcgattgataatttttgcacattaaactcaaccaaaaagtccattaacacatttacaaaagaaaaa---tttggg 15838382  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    ||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  15838383 caatctgaaaattttcacacgcaaataggtcttggaattttatttagcacactattgacgggttcat 15838449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 29728553 - 29728386
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||  ||||| ||| ||||||||||||| ||||||||||||||| ||| ||||||||  ||||||||| ||||             ||||||    
T  29728553 ggcgaccccggacggtcgcccgtgctcgatcgataaattttgcacattagactcaacccaaaagctcattaacacatttacaaaaagaaaaa--tttggg 29728456  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| | ||||||||||||||||  ||||||||||||||||||||||||||||||||||||    
T  29728455 caatctgaaaattgtgacacgcaaataggtcttcgaattttatttagcacactattgacgggttcatctc 29728386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 146 - 280
Target Start/End: Original strand, 9877242 - 9877374
Alignment:
Q  146 ggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgc 245  Q
    |||||||| |||||||||||||||||||||| || ||||||| ||||||||||||||||             ||||||||||||||||||||||||| ||    
T  9877242 ggctcgattgataatttttgcacattagacctaacccaaaagtcaattaacacacttacaaaaagaaaaa--tttgggcaatctgaaaattctcacatgc 9877339  T
Q  246 aaataggtctcggaattttatttagcacactattg 280  Q
    |||||||||||| ||||||||||||||||||||||    
T  9877340 aaataggtctcgaaattttatttagcacactattg 9877374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 39914516 - 39914681
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  39914516 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta---taaaaaaaaaatttgggc 39914612  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||| | |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  39914613 aatttgaaaattgtcacaagtaaataggtcttggaattttatttggcacactattgacagtttcatctc 39914681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 218 - 293
Target Start/End: Original strand, 42231029 - 42231104
Alignment:
Q  218 tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||| |||||||||||| | ||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  42231029 tttgggcaatttgaaaattctcatatgcaaataggtctcagaattttatttagcacactattgacggattcatctc 42231104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 103
Target Start/End: Complemental strand, 21692306 - 21692224
Alignment:
Q  20 caaaggatatatttaactagttacttttataatagccttgcaaaaaatggaagaaaaaatcaagattcatgacaagattcatga 103  Q
    ||||||||| ||||| ||| ||||||| ||| |||||||||||||| |||||||||| || |||||||||||||||||||||||    
T  21692306 caaaggatagatttagctacttactttcatagtagccttgcaaaaa-tggaagaaaagatgaagattcatgacaagattcatga 21692224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 143 - 204
Target Start/End: Original strand, 3435288 - 3435349
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||||| ||||||||||||||||||||||||||||| |||||| || ||||||||||||||    
T  3435288 ccgggcttgatcgataatttttgcacattagacccaacccaaaaacccattaacacacttac 3435349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 147 - 203
Target Start/End: Complemental strand, 40470637 - 40470581
Alignment:
Q  147 gctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||||||||||||||||||||||||||||  |||||| | |||||||||||||    
T  40470637 gctcgatcgataatttttgcacattagacccaaatcaaaagtccattaacacactta 40470581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 40470509 - 40470475
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  40470509 aattttatttagcacactattgacgggttcatctc 40470475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 116 - 199
Target Start/End: Complemental strand, 10397215 - 10397132
Alignment:
Q  116 caccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacaca 199  Q
    |||||||||||||| |||||   ||| |||||||| ||||||||||| | ||||||||   ||| ||||||||| |||||||||    
T  10397215 caccgcccggcgactccgggcactcgcccgggctcaatcgataatttcttcacattaggttcaacccaaaagccgattaacaca 10397132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0502 (Bit Score: 106; Significance: 5e-53; HSPs: 1)
Name: scaffold0502
Description:

Target: scaffold0502; HSP #1
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 5230 - 5397
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| ||||| |||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||             ||||||    
T  5230 ggcgaccccgggcggtcgcccgggctcgatcaataatttttgcacattagacccaatctaaaagccaattaacacacttacaaaaagaaaat--tttggg 5327  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5328 caatctgaaaattctcacatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 5397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 102; Significance: 1e-50; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 104 - 293
Target Start/End: Original strand, 35907532 - 35907719
Alignment:
Q  104 catgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacactta 203  Q
    |||||||| |||||||||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||||  |||||||    
T  35907532 catgggcggtttcaccgcccggcgacctcgggcggtcgcccgggcttgatcgataatttttgcacattagacccaacccaaaagccaattagtacactta 35907631  T
Q  204 cnnnnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |             |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  35907632 c--aaaaagaaaattttgggtaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgagttcatctc 35907719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 107 - 292
Target Start/End: Original strand, 17445296 - 17445479
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| |||||  |||||||||||||  | ||||| ||||||| |||| |||||||||| |||||||| |||| ||||||| ||||||||||||||||      
T  17445296 gggcggtttcattgcccggcgaccccatgcggtcgcccgggctggatcaataatttttgtacattagatccaacccaaaagtcaattaacacacttacaa 17445395  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatct 292  Q
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  17445396 aaagaaaaa--tttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacattattgacgggttcatct 17445479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 107 - 293
Target Start/End: Complemental strand, 321561 - 321377
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||||| ||||||||   |||| |||||||||||||||||||||||||||||  ||||||| |||| ||||||| | ||||||||| ||||      
T  321561 gggcggtttcaccacccggcgatttcgggcggtcgtccgggctcgatcgataatttttgtgcattagatccaacccaaaagtccattaacacagttacaa 321462  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||||||| | |||||||||||||||||||||||||| |||| ||||||||||||||||||    
T  321461 aaagaaaaa--tttgggcaatctgaaaattctcatatgcaaataggtctcggaattttatttaacacattattgacgggttcatctc 321377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 3828967 - 3829150
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||| | |||||| |||||||  |||||  |||| |||||||||||||||||||||||| |||||| |||||||   ||||||||||||||      
T  3828967 gggcggtttcatcacccggcaaccccggacggtcgctcgggttcgatcgataatttttgcacattaaacccaacccaaaagttcattaacacacttacaa 3829066  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||||||||||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  3829067 aaagaaaaa--tttgggcaatctgaaaattttcatacgcaaataggtct-ggaattttatttagcacactattgacgggttcatctc 3829150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 128 - 290
Target Start/End: Original strand, 7433449 - 7433609
Alignment:
Q  128 accccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaat 227  Q
    |||||||| ||||| ||| |||||||| |||||||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||||||    
T  7433449 accccgggcggtcgcccgagctcgatctataatttttgcacattagactcaacccaaaagcccattaacacatttacaaaaagaaaat--tttgggcaat 7433546  T
Q  228 ctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcat 290  Q
    || |||||| |||||| ||||||||||| | ||||||||||||||||||||||||||||||||    
T  7433547 ctaaaaattgtcacacacaaataggtcttgaaattttatttagcacactattgacgggttcat 7433609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 143 - 293
Target Start/End: Complemental strand, 42311089 - 42310941
Alignment:
Q  143 ccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctcaca 242  Q
    ||||||||||||||||||||||||||||||||| ||| |||||||||  |||||||| ||||             ||||||||||||||||||| |||||    
T  42311089 ccgggctcgatcgataatttttgcacattagactcaacccaaaagcccgttaacacatttacaaaaagaaaaa--tttgggcaatctgaaaattgtcaca 42310992  T
Q  243 cgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    |||||||| |||| | |||||||||||| || |||||||||||||||||||    
T  42310991 cgcaaataagtcttgaaattttatttagtacgctattgacgggttcatctc 42310941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 26144256 - 26144422
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  26144256 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta--taaaaagaaaaatttgggc 26144353  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  26144354 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 26144422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 124 - 293
Target Start/End: Complemental strand, 32982223 - 32982056
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||||| |||||  ||||| |||||||||||||||||||||||||||||| | ||||||| ||||||| | ||||             |||||     
T  32982223 ggcgaccccgggcggtcgcgcgggcccgatcgataatttttgcacattagacccaacctaaaagcccattaacatatttacaaaaagaaaaa--tttgga 32982126  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||||| |||||||| | ||||||||    
T  32982125 caatctgaaaattgtcacacacaaataggtcttggaattttatttagcactctattgacagattcatctc 32982056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 107 - 204
Target Start/End: Complemental strand, 41972458 - 41972362
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||| || ||||| || ||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| | ||||||| ||||||||||||||    
T  41972458 gggcggttccaccgtccagcgaccccgggcggtcg-cctggctcgatcgataatttttgcacattagatccaacctaaaagcctattaacacacttac 41972362  T

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Target: chr1; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 107 - 204
Target Start/End: Original strand, 33489670 - 33489767
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttac 204  Q
    ||||| ||||||| ||||||||||||||  |||||| |||| | | ||||||||||||| ||||||||| ||| | ||||||| ||||||||||||||    
T  33489670 gggcggtttcaccacccggcgaccccggacggtcgttcgggattgttcgataatttttgtacattagactcaaactaaaagcccattaacacacttac 33489767  T

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Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 97 - 160
Target Start/End: Complemental strand, 44352677 - 44352614
Alignment:
Q  97 ttcatgacatgggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataat 160  Q
    ||||| ||| ||||| |||||||  |||||||||||||| ||||| ||||||||||||||||||    
T  44352677 ttcataacaggggcggtttcaccatccggcgaccccgggaggtcgcccgggctcgatcgataat 44352614  T

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Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 161
Target Start/End: Original strand, 31866960 - 31867014
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatt 161  Q
    ||||| ||||||||||||||||||||||| ||||| ||||| |||| ||||||||    
T  31866960 gggcggtttcaccgcccggcgaccccgggcggtcgcccgggttcgaccgataatt 31867014  T

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Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Original strand, 33489839 - 33489873
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  33489839 aattttatttagcacactattgacgggttcatctc 33489873  T

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Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 139 - 201
Target Start/End: Complemental strand, 35951497 - 35951435
Alignment:
Q  139 tcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacact 201  Q
    ||||||||||||||||||||||||||| |||||||  | || |||| |||| |||||||||||    
T  35951497 tcgtccgggctcgatcgataatttttgtacattaggtcgaacccaatagcccattaacacact 35951435  T

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Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 259 - 293
Target Start/End: Complemental strand, 41972290 - 41972256
Alignment:
Q  259 aattttatttagcacactattgacgggttcatctc 293  Q
    |||||||||||||||||||||||||||||||||||    
T  41972290 aattttatttagcacactattgacgggttcatctc 41972256  T

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Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 107 - 189
Target Start/End: Complemental strand, 48901288 - 48901207
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagcc 189  Q
    ||||| || ||||||||||| || ||||| ||| | ||||| |||||||||||||| |||||||||| ||||| |||||||||    
T  48901288 gggcggttccaccgcccggcaactccgggcggtgg-ccggggtcgatcgataatttatgcacattaggcccaacccaaaagcc 48901207  T

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Target: scaffold0154 (Bit Score: 83; Significance: 2e-39; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 107 - 293
Target Start/End: Original strand, 31463 - 31647
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnn 206  Q
    ||||| ||||| |||||||||||||| |  ||||| ||||||||||||||||||||||||||| ||||||||| ||||||||| ||||||||||||||      
T  31463 gggcggtttcatcgcccggcgaccccagacggtcgcccgggctcgatcgataatttttgcacactagacccaacccaaaagcccattaacacacttac-- 31560  T
Q  207 nnnnnnnnnnntttgggcaatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
               ||||| |||||||||||||||||| ||||||||||||| | |||||||||| ||||||||||||| ||||||||||    
T  31561 aaaaagaaaaatttggacaatctgaaaattctcactcgcaaataggtctagtaattttattttgcacactattgacaggttcatctc 31647  T

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Target: scaffold0041 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 140 - 293
Target Start/End: Original strand, 52941 - 53092
Alignment:
Q  140 cgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggcaatctgaaaattctc 239  Q
    |||||||||||||||||||||||||||||||||||   || ||||||||||||||||||| ||||             ||||| ||||||||||||||||    
T  52941 cgtccgggctcgatcgataatttttgcacattagatttaacccaaaagccaattaacacatttacaaaaagaaaaa--tttggacaatctgaaaattctc 53038  T
Q  240 acacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53039 acatgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 53092  T

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Target: scaffold0069 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 124 - 293
Target Start/End: Original strand, 17842 - 18009
Alignment:
Q  124 ggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttggg 223  Q
    |||||||||| | | ||||||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||||| ||||             ||||||    
T  17842 ggcgaccccgagcgatcgtccgggctcgatcgataatttttgcacattagactcaacccaaaagcccattaacacatttac--aaaaagaaaaatttggg 17939  T
Q  224 caatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||||||||||||| ||||| | |||||||||| | |||||||||||||||||||||||| | ||||||||    
T  17940 caatctgaaaattgtcacatgtaaataggtcttgaaattttatttagcacactattgacagtttcatctc 18009  T

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Target: scaffold0002 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 125 - 293
Target Start/End: Complemental strand, 480623 - 480457
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    ||||||||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  480623 gcgaccccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta--taaaaagaaaaatttgggc 480526  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  480525 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 480457  T

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Target: scaffold2142 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold2142
Description:

Target: scaffold2142; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 125 - 293
Target Start/End: Original strand, 523 - 689
Alignment:
Q  125 gcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaatccaaaagccaattaacacacttacnnnnnnnnnnnnntttgggc 224  Q
    |||| |||||| ||||| ||||||||||||||||||||||||||||||||| ||| | ||||||  ||||||||| |||              |||||||    
T  523 gcgatcccgggcggtcgcccgggctcgatcgataatttttgcacattagactcaaccaaaaagctcattaacacattta--taaaaagaaaaatttgggc 620  T
Q  225 aatctgaaaattctcacacgcaaataggtctcggaattttatttagcacactattgacgggttcatctc 293  Q
    ||| |||||||| ||||||| |||||||||| |||||||||||| ||||||||||||| | ||||||||    
T  621 aatttgaaaattgtcacacgtaaataggtcttggaattttatttggcacactattgacagtttcatctc 689  T

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Target: scaffold0769 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0769
Description:

Target: scaffold0769; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 107 - 179
Target Start/End: Original strand, 1260 - 1332
Alignment:
Q  107 gggcgatttcaccgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaa 179  Q
    ||||| ||| ||||||||||||||||||| ||||| ||||||||||||  ||||||   |||||||| |||||    
T  1260 gggcggttttaccgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaa 1332  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 194021 - 194083
Alignment:
Q  117 accgcccggcgaccccgggtggtcgtccgggctcgatcgataatttttgcacattagacccaa 179  Q
    ||||||||||||||||||| ||||| ||||||||||||  ||||||   |||||||| |||||    
T  194021 accgcccggcgaccccgggcggtcgcccgggctcgatccgtaatttcctcacattaggcccaa 194083  T

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