View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8478_low_5 (Length: 583)

Name: NF8478_low_5
Description: NF8478
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8478_low_5
NF8478_low_5
[»] chr6 (80 HSPs)
chr6 (1-565)||(28077721-28078285)
chr6 (1-339)||(28037477-28037819)
chr6 (6-222)||(25465460-25465676)
chr6 (1-237)||(16455282-16455515)
chr6 (1-222)||(19696665-19696887)
chr6 (85-222)||(22610985-22611122)
chr6 (6-150)||(22857893-22858038)
chr6 (43-223)||(15346613-15346797)
chr6 (1-237)||(3027705-3027943)
chr6 (6-166)||(12937117-12937278)
chr6 (1-237)||(15367256-15367496)
chr6 (473-562)||(28036995-28037083)
chr6 (43-237)||(30443554-30443752)
chr6 (1-223)||(13057419-13057643)
chr6 (1-157)||(12186003-12186161)
chr6 (1-237)||(25078418-25078647)
chr6 (156-237)||(30445899-30445979)
chr6 (1-150)||(26945369-26945521)
chr6 (1-237)||(11982874-11983118)
chr6 (1-150)||(15719867-15720018)
chr6 (1-237)||(17012265-17012500)
chr6 (6-116)||(12911421-12911531)
chr6 (43-217)||(3629733-3629912)
chr6 (1-150)||(14466548-14466701)
chr6 (1-233)||(30728675-30728913)
chr6 (175-237)||(7294197-7294258)
chr6 (42-108)||(11262724-11262790)
chr6 (1-152)||(13039979-13040132)
chr6 (130-222)||(6610378-6610469)
chr6 (1-223)||(9020151-9020382)
chr6 (1-237)||(32280221-32280461)
chr6 (1-95)||(14458764-14458856)
chr6 (1-237)||(24338297-24338536)
chr6 (168-237)||(3918772-3918840)
chr6 (168-237)||(22869952-22870019)
chr6 (43-124)||(35201295-35201376)
chr6 (83-222)||(26505254-26505395)
chr6 (358-401)||(28037435-28037478)
chr6 (1-71)||(3390604-3390674)
chr6 (1-95)||(4816228-4816320)
chr6 (1-67)||(30445749-30445815)
chr6 (99-239)||(22490937-22491079)
chr6 (43-106)||(13878859-13878922)
chr6 (43-106)||(13883607-13883670)
chr6 (43-106)||(16786051-16786114)
chr6 (194-237)||(22857845-22857888)
chr6 (43-110)||(33215960-33216026)
chr6 (1-95)||(1230246-1230338)
chr6 (1-95)||(30967426-30967518)
chr6 (116-217)||(3394708-3394815)
chr6 (6-95)||(19704564-19704651)
chr6 (6-95)||(20915353-20915440)
chr6 (14-71)||(25477519-25477576)
chr6 (168-232)||(3919171-3919234)
chr6 (25-97)||(5273211-5273282)
chr6 (43-95)||(25941802-25941854)
chr6 (162-224)||(5273071-5273133)
chr6 (131-237)||(6843487-6843591)
chr6 (43-106)||(17038367-17038430)
chr6 (162-240)||(24501300-24501375)
chr6 (168-237)||(8717197-8717266)
chr6 (48-106)||(26887213-26887271)
chr6 (1-95)||(28241318-28241410)
chr6 (168-237)||(29754551-29754620)
chr6 (168-222)||(30034463-30034516)
chr6 (1-95)||(30034600-30034692)
chr6 (162-222)||(2628743-2628803)
chr6 (184-237)||(12911371-12911423)
chr6 (190-223)||(20544843-20544876)
chr6 (86-147)||(26455099-26455163)
chr6 (185-237)||(33216104-33216157)
chr6 (168-223)||(1230105-1230160)
chr6 (168-223)||(4816087-4816142)
chr6 (162-237)||(12195356-12195431)
chr6 (43-95)||(14507173-14507224)
chr6 (43-95)||(17694849-17694901)
chr6 (168-223)||(18322495-18322550)
chr6 (43-95)||(22342798-22342850)
chr6 (43-95)||(25465896-25465948)
chr6 (168-223)||(26932419-26932474)
[»] chr1 (93 HSPs)
chr1 (1-222)||(16561657-16561878)
chr1 (1-233)||(13125316-13125549)
chr1 (1-222)||(18800439-18800664)
chr1 (1-237)||(15916580-15916819)
chr1 (77-222)||(43104452-43104599)
chr1 (1-237)||(26613096-26613331)
chr1 (1-237)||(8348907-8349143)
chr1 (1-222)||(30790266-30790492)
chr1 (1-236)||(9240937-9241177)
chr1 (1-237)||(30738481-30738721)
chr1 (1-150)||(8347214-8347364)
chr1 (1-204)||(13127575-13127779)
chr1 (1-237)||(28279456-28279693)
chr1 (1-150)||(42922420-42922570)
chr1 (1-223)||(17185995-17186219)
chr1 (6-237)||(27916691-27916921)
chr1 (1-223)||(14183470-14183683)
chr1 (1-223)||(18839777-18840006)
chr1 (6-223)||(27336800-27337026)
chr1 (1-237)||(2949081-2949322)
chr1 (1-237)||(13215275-13215516)
chr1 (9-222)||(15669262-15669477)
chr1 (1-223)||(31424878-31425106)
chr1 (1-223)||(23816076-23816307)
chr1 (1-223)||(47906460-47906688)
chr1 (43-223)||(14097831-14098019)
chr1 (1-223)||(50307405-50307637)
chr1 (1-232)||(15823736-15823977)
chr1 (1-212)||(25128062-25128280)
chr1 (43-217)||(28206934-28207118)
chr1 (1-223)||(6114969-6115194)
chr1 (1-237)||(16429147-16429385)
chr1 (3-240)||(25251120-25251364)
chr1 (77-212)||(26332391-26332526)
chr1 (44-149)||(26520061-26520169)
chr1 (43-223)||(39462750-39462940)
chr1 (1-224)||(4131237-4131467)
chr1 (6-223)||(27338991-27339217)
chr1 (1-157)||(6756716-6756875)
chr1 (1-224)||(12302366-12302596)
chr1 (1-157)||(50076605-50076763)
chr1 (106-222)||(50078653-50078774)
chr1 (1-212)||(18307299-18307516)
chr1 (1-237)||(40134134-40134376)
chr1 (1-71)||(50078842-50078912)
chr1 (6-95)||(21353345-21353434)
chr1 (74-223)||(10116038-10116184)
chr1 (1-223)||(11457338-11457566)
chr1 (1-95)||(10399827-10399919)
chr1 (1-95)||(51750229-51750321)
chr1 (133-237)||(13785109-13785212)
chr1 (175-223)||(156049-156096)
chr1 (1-150)||(16428843-16428994)
chr1 (43-106)||(2232723-2232786)
chr1 (43-106)||(9521848-9521911)
chr1 (43-106)||(9526599-9526662)
chr1 (1-95)||(6823204-6823296)
chr1 (1-95)||(15294833-15294925)
chr1 (1-95)||(24325853-24325945)
chr1 (1-95)||(31735520-31735612)
chr1 (168-237)||(39932442-39932512)
chr1 (1-71)||(47451832-47451901)
chr1 (112-222)||(13433455-13433566)
chr1 (6-95)||(28840874-28840961)
chr1 (1-34)||(43104351-43104384)
chr1 (162-237)||(16226530-16226605)
chr1 (162-237)||(16231925-16232000)
chr1 (168-222)||(26519305-26519358)
chr1 (168-223)||(31490274-31490329)
chr1 (3-34)||(8213584-8213615)
chr1 (162-224)||(10399685-10399747)
chr1 (168-222)||(13447133-13447187)
chr1 (168-222)||(15294694-15294748)
chr1 (1-32)||(49495271-49495302)
chr1 (1-95)||(2510324-2510416)
chr1 (1-71)||(2617706-2617775)
chr1 (168-237)||(9459279-9459348)
chr1 (168-237)||(9463106-9463175)
chr1 (1-95)||(17324635-17324727)
chr1 (47-217)||(28998116-28998299)
chr1 (47-217)||(29003832-29004015)
chr1 (46-95)||(2401218-2401267)
chr1 (186-223)||(6995556-6995593)
chr1 (162-222)||(20291818-20291878)
chr1 (26-95)||(51752577-51752645)
chr1 (6-34)||(155901-155929)
chr1 (43-95)||(4144680-4144732)
chr1 (161-237)||(11693172-11693245)
chr1 (43-95)||(13358804-13358855)
chr1 (1-121)||(17324253-17324371)
chr1 (168-223)||(46431564-46431619)
chr1 (162-237)||(47177724-47177799)
chr1 (168-223)||(51750406-51750461)
[»] chr8 (62 HSPs)
chr8 (6-237)||(31035368-31035600)
chr8 (48-223)||(31566425-31566601)
chr8 (1-223)||(31578148-31578367)
chr8 (1-237)||(16833795-16834022)
chr8 (1-222)||(31162455-31162683)
chr8 (1-223)||(13858350-13858574)
chr8 (21-237)||(17847784-17848000)
chr8 (1-237)||(21482556-21482796)
chr8 (1-222)||(3005502-3005721)
chr8 (1-222)||(2467995-2468219)
chr8 (1-150)||(21480748-21480898)
chr8 (6-121)||(6376239-6376354)
chr8 (1-224)||(28251426-28251656)
chr8 (1-222)||(36865781-36866012)
chr8 (1-223)||(15072957-15073186)
chr8 (3-157)||(14419120-14419278)
chr8 (1-217)||(25952766-25952988)
chr8 (1-119)||(3896068-3896186)
chr8 (1-237)||(33541257-33541499)
chr8 (138-222)||(6376433-6376517)
chr8 (46-224)||(14808051-14808236)
chr8 (45-220)||(1225456-1225626)
chr8 (1-222)||(30480365-30480592)
chr8 (1-223)||(41382908-41383138)
chr8 (1-237)||(15185566-15185804)
chr8 (1-95)||(3874256-3874348)
chr8 (1-95)||(15809464-15809556)
chr8 (1-95)||(41384990-41385082)
chr8 (3-95)||(4424266-4424356)
chr8 (168-223)||(13984949-13985003)
chr8 (43-106)||(16757254-16757317)
chr8 (43-106)||(25684775-25684838)
chr8 (186-237)||(27911514-27911565)
chr8 (186-237)||(27957933-27957984)
chr8 (43-106)||(28328040-28328103)
chr8 (43-106)||(28890898-28890961)
chr8 (1-95)||(608980-609072)
chr8 (168-237)||(3874416-3874485)
chr8 (162-223)||(18811125-18811186)
chr8 (1-95)||(32339555-32339647)
chr8 (189-222)||(3898936-3898969)
chr8 (43-108)||(4812472-4812537)
chr8 (43-95)||(23179558-23179610)
chr8 (168-223)||(43530538-43530593)
chr8 (186-237)||(14477687-14477738)
chr8 (1-32)||(15956203-15956234)
chr8 (43-110)||(21034002-21034068)
chr8 (43-106)||(28332763-28332826)
chr8 (42-108)||(33838904-33838971)
chr8 (186-222)||(2467896-2467932)
chr8 (168-223)||(3883452-3883507)
chr8 (43-95)||(9021104-9021156)
chr8 (132-223)||(13985683-13985773)
chr8 (43-95)||(17799421-17799473)
chr8 (185-225)||(21034144-21034184)
chr8 (186-222)||(27827427-27827463)
chr8 (43-95)||(27829583-27829634)
chr8 (186-222)||(27829738-27829774)
chr8 (168-223)||(28283078-28283133)
chr8 (43-95)||(30423348-30423400)
chr8 (172-223)||(30423475-30423524)
chr8 (43-152)||(37214199-37214312)
[»] chr2 (75 HSPs)
chr2 (1-221)||(40699540-40699761)
chr2 (1-237)||(20146461-20146698)
chr2 (45-237)||(8173539-8173731)
chr2 (5-237)||(17897101-17897331)
chr2 (6-219)||(33604092-33604305)
chr2 (46-224)||(20592288-20592468)
chr2 (126-237)||(13828179-13828289)
chr2 (1-224)||(11577973-11578198)
chr2 (116-223)||(7503073-7503179)
chr2 (1-137)||(31732732-31732866)
chr2 (1-217)||(42923373-42923598)
chr2 (116-221)||(10942379-10942485)
chr2 (116-221)||(10948248-10948354)
chr2 (1-224)||(19007806-19008035)
chr2 (5-116)||(37962917-37963027)
chr2 (1-214)||(6258687-6258906)
chr2 (1-223)||(43623439-43623669)
chr2 (43-223)||(35028783-35028959)
chr2 (99-222)||(28459054-28459182)
chr2 (1-128)||(22874296-22874424)
chr2 (47-150)||(27136070-27136175)
chr2 (133-222)||(43482720-43482809)
chr2 (1-121)||(6264118-6264238)
chr2 (1-221)||(14837433-14837661)
chr2 (1-203)||(17848606-17848813)
chr2 (1-95)||(11739556-11739649)
chr2 (43-219)||(3022379-3022562)
chr2 (1-111)||(13828322-13828432)
chr2 (1-203)||(7462826-7463037)
chr2 (1-95)||(23452234-23452326)
chr2 (43-121)||(39680177-39680255)
chr2 (6-95)||(17943631-17943720)
chr2 (168-237)||(34574992-34575059)
chr2 (1-157)||(40031982-40032143)
chr2 (1-217)||(22287203-22287425)
chr2 (185-237)||(28570256-28570308)
chr2 (43-106)||(2736337-2736400)
chr2 (168-223)||(15697378-15697432)
chr2 (43-106)||(17462568-17462631)
chr2 (1-224)||(17849283-17849512)
chr2 (43-223)||(28196844-28197029)
chr2 (170-237)||(30720467-30720532)
chr2 (43-106)||(39687115-39687178)
chr2 (43-106)||(45679855-45679918)
chr2 (1-95)||(19502008-19502100)
chr2 (1-217)||(21520556-21520782)
chr2 (1-157)||(22407384-22407543)
chr2 (168-237)||(36560983-36561052)
chr2 (1-71)||(45280004-45280073)
chr2 (1-242)||(35107460-35107704)
chr2 (168-223)||(27105140-27105196)
chr2 (43-95)||(30479127-30479179)
chr2 (43-95)||(42064721-42064773)
chr2 (6-94)||(43139545-43139632)
chr2 (43-106)||(2741073-2741136)
chr2 (16-95)||(13910042-13910119)
chr2 (186-237)||(22874466-22874517)
chr2 (43-106)||(33670953-33671016)
chr2 (3-34)||(41303090-41303121)
chr2 (168-222)||(42453820-42453874)
chr2 (1-95)||(5375343-5375435)
chr2 (1-95)||(19504343-19504435)
chr2 (43-150)||(22162961-22163070)
chr2 (168-237)||(36558723-36558792)
chr2 (1-95)||(42452947-42453038)
chr2 (168-221)||(45279860-45279913)
chr2 (1-34)||(15694070-15694103)
chr2 (162-222)||(23452094-23452154)
chr2 (6-95)||(27104968-27105055)
chr2 (186-219)||(39287442-39287475)
chr2 (43-95)||(12781218-12781270)
chr2 (43-95)||(20054762-20054814)
chr2 (43-95)||(27517636-27517688)
chr2 (168-223)||(35217826-35217881)
chr2 (43-95)||(38191145-38191197)
[»] chr4 (102 HSPs)
chr4 (5-237)||(22295412-22295644)
chr4 (5-224)||(31983399-31983613)
chr4 (1-237)||(25357885-25358122)
chr4 (6-237)||(16185688-16185920)
chr4 (1-218)||(18534703-18534922)
chr4 (1-218)||(18537345-18537564)
chr4 (46-237)||(9864000-9864194)
chr4 (1-224)||(38890089-38890315)
chr4 (1-222)||(47150758-47150983)
chr4 (1-222)||(8756119-8756341)
chr4 (1-222)||(12102331-12102550)
chr4 (1-222)||(28453926-28454151)
chr4 (84-237)||(9022611-9022765)
chr4 (6-237)||(10113118-10113349)
chr4 (1-236)||(3982032-3982266)
chr4 (1-222)||(15032410-15032638)
chr4 (1-222)||(19322937-19323161)
chr4 (1-237)||(2891535-2891778)
chr4 (83-223)||(52043427-52043569)
chr4 (43-237)||(10114602-10114796)
chr4 (1-222)||(36378536-36378761)
chr4 (1-224)||(40091275-40091504)
chr4 (84-223)||(29609361-29609500)
chr4 (1-223)||(36919445-36919673)
chr4 (6-234)||(3578537-3578756)
chr4 (1-223)||(22800721-22800951)
chr4 (1-221)||(33415352-33415577)
chr4 (3-222)||(36380595-36380818)
chr4 (43-222)||(47563046-47563230)
chr4 (1-219)||(40637318-40637545)
chr4 (172-237)||(47078695-47078760)
chr4 (43-223)||(38928040-38928225)
chr4 (1-222)||(17662108-17662334)
chr4 (1-237)||(22802579-22802823)
chr4 (116-223)||(23001336-23001442)
chr4 (1-223)||(41997736-41997959)
chr4 (1-152)||(4215550-4215701)
chr4 (1-95)||(6765088-6765180)
chr4 (1-95)||(24348462-24348554)
chr4 (1-223)||(36921354-36921582)
chr4 (1-237)||(16453553-16453794)
chr4 (43-157)||(24879275-24879395)
chr4 (43-157)||(24880737-24880857)
chr4 (1-108)||(16455485-16455590)
chr4 (1-95)||(5635473-5635565)
chr4 (1-95)||(7941567-7941659)
chr4 (1-95)||(8631416-8631508)
chr4 (46-223)||(14789289-14789473)
chr4 (1-150)||(30136793-30136945)
chr4 (171-223)||(5516103-5516154)
chr4 (43-110)||(4885007-4885073)
chr4 (168-222)||(5664651-5664706)
chr4 (6-97)||(9176469-9176558)
chr4 (6-97)||(22132387-22132476)
chr4 (1-224)||(24889040-24889270)
chr4 (1-71)||(5198664-5198733)
chr4 (19-224)||(6133098-6133310)
chr4 (1-71)||(37313085-37313155)
chr4 (6-59)||(9022554-9022607)
chr4 (43-104)||(11853681-11853742)
chr4 (46-223)||(14787290-14787474)
chr4 (168-237)||(26558009-26558077)
chr4 (6-95)||(38409453-38409540)
chr4 (126-237)||(6765222-6765333)
chr4 (43-95)||(8529400-8529452)
chr4 (168-223)||(11435376-11435431)
chr4 (3-71)||(13547400-13547467)
chr4 (44-224)||(18409208-18409394)
chr4 (43-95)||(18587099-18587151)
chr4 (168-223)||(27499464-27499520)
chr4 (168-223)||(37089228-37089284)
chr4 (168-223)||(53405554-53405610)
chr4 (43-110)||(4556043-4556109)
chr4 (43-152)||(12395780-12395893)
chr4 (43-152)||(12400742-12400855)
chr4 (43-106)||(15831274-15831337)
chr4 (186-237)||(16455661-16455712)
chr4 (43-110)||(16688923-16688989)
chr4 (168-222)||(31849456-31849510)
chr4 (168-223)||(44599696-44599750)
chr4 (162-223)||(3824465-3824527)
chr4 (186-224)||(18311231-18311269)
chr4 (1-71)||(47868645-47868714)
chr4 (6-71)||(2484893-2484957)
chr4 (6-71)||(11008588-11008652)
chr4 (6-95)||(11435203-11435290)
chr4 (6-95)||(11437611-11437698)
chr4 (6-95)||(22044388-22044475)
chr4 (6-95)||(22046683-22046770)
chr4 (6-95)||(31849596-31849683)
chr4 (6-95)||(37089369-37089456)
chr4 (186-223)||(37312940-37312977)
chr4 (1-34)||(40999006-40999039)
chr4 (126-224)||(52942345-52942448)
chr4 (1-34)||(54928705-54928738)
chr4 (43-104)||(55822397-55822457)
chr4 (170-221)||(14633741-14633792)
chr4 (17-97)||(18709159-18709237)
chr4 (168-223)||(18847573-18847628)
chr4 (168-223)||(22046543-22046598)
chr4 (43-95)||(36769612-36769664)
chr4 (168-235)||(54906985-54907049)
[»] chr3 (96 HSPs)
chr3 (3-222)||(53597408-53597628)
chr3 (3-237)||(27420822-27421053)
chr3 (5-222)||(561640-561860)
chr3 (6-237)||(36871151-36871384)
chr3 (6-224)||(7768745-7768962)
chr3 (43-187)||(1674175-1674322)
chr3 (1-237)||(31151513-31151752)
chr3 (1-222)||(25634057-25634278)
chr3 (3-119)||(24181552-24181668)
chr3 (1-222)||(14634307-14634529)
chr3 (5-237)||(6484534-6484771)
chr3 (5-222)||(25635555-25635772)
chr3 (1-223)||(43421276-43421502)
chr3 (1-217)||(3314854-3315078)
chr3 (6-240)||(1620310-1620544)
chr3 (1-222)||(27635515-27635745)
chr3 (1-95)||(28761422-28761516)
chr3 (1-224)||(1313579-1313806)
chr3 (41-239)||(5926609-5926812)
chr3 (1-237)||(17795428-17795667)
chr3 (1-237)||(19103868-19104107)
chr3 (6-237)||(23633628-23633860)
chr3 (1-223)||(18099026-18099257)
chr3 (43-224)||(32219296-32219487)
chr3 (1-221)||(43226255-43226477)
chr3 (1-223)||(53915354-53915583)
chr3 (1-224)||(880311-880538)
chr3 (129-222)||(21702850-21702944)
chr3 (1-157)||(51943540-51943702)
chr3 (5-157)||(32263966-32264121)
chr3 (43-223)||(43423324-43423509)
chr3 (1-223)||(53917522-53917751)
chr3 (43-217)||(24979919-24980104)
chr3 (1-221)||(43228461-43228687)
chr3 (1-224)||(4308138-4308368)
chr3 (2-223)||(12267835-12268061)
chr3 (1-237)||(28101850-28102089)
chr3 (1-95)||(1321649-1321741)
chr3 (1-95)||(9604602-9604694)
chr3 (6-95)||(29913952-29914041)
chr3 (157-223)||(31021027-31021092)
chr3 (1-223)||(36011997-36012227)
chr3 (1-95)||(38890210-38890302)
chr3 (42-222)||(16997009-16997191)
chr3 (43-223)||(18162875-18163064)
chr3 (21-106)||(22625970-22626055)
chr3 (43-95)||(10595031-10595083)
chr3 (126-223)||(18096756-18096858)
chr3 (74-223)||(28181245-28181401)
chr3 (172-223)||(16928135-16928186)
chr3 (168-222)||(24181678-24181733)
chr3 (6-97)||(25389080-25389169)
chr3 (1-222)||(51674626-51674853)
chr3 (43-106)||(54193359-54193422)
chr3 (1-95)||(10084384-10084476)
chr3 (1-222)||(1626543-1626770)
chr3 (43-104)||(10094063-10094124)
chr3 (43-104)||(10100080-10100141)
chr3 (43-104)||(10200943-10201004)
chr3 (43-108)||(10612763-10612827)
chr3 (1-34)||(11007578-11007611)
chr3 (1-34)||(54884324-54884357)
chr3 (162-237)||(747100-747175)
chr3 (43-95)||(10897138-10897190)
chr3 (43-95)||(47878168-47878220)
chr3 (162-222)||(51726863-51726922)
chr3 (6-97)||(746932-747021)
chr3 (1-32)||(3306931-3306962)
chr3 (16-95)||(3859712-3859789)
chr3 (168-222)||(10958179-10958233)
chr3 (6-57)||(13420055-13420106)
chr3 (1-95)||(10191305-10191397)
chr3 (1-95)||(10958318-10958410)
chr3 (1-71)||(25533612-25533681)
chr3 (43-121)||(27544405-27544483)
chr3 (1-95)||(42990474-42990566)
chr3 (1-157)||(47148823-47148982)
chr3 (168-237)||(50494346-50494415)
chr3 (14-95)||(5886381-5886460)
chr3 (14-95)||(5899854-5899933)
chr3 (6-95)||(7606583-7606670)
chr3 (43-104)||(10207989-10208050)
chr3 (168-237)||(11066928-11066995)
chr3 (162-222)||(11168443-11168503)
chr3 (43-96)||(42992481-42992533)
chr3 (186-223)||(45883304-45883341)
chr3 (186-222)||(1321845-1321881)
chr3 (43-110)||(4535747-4535814)
chr3 (168-223)||(9604463-9604518)
chr3 (43-95)||(15781090-15781141)
chr3 (43-95)||(35919110-35919161)
chr3 (162-221)||(38890382-38890441)
chr3 (43-95)||(41849270-41849321)
chr3 (186-222)||(42990665-42990701)
chr3 (43-95)||(48390299-48390351)
chr3 (43-95)||(53894052-53894103)
[»] chr7 (89 HSPs)
chr7 (1-222)||(24813364-24813588)
chr7 (1-222)||(24817219-24817443)
chr7 (1-182)||(6332420-6332600)
chr7 (3-224)||(7188741-7188963)
chr7 (52-237)||(6049123-6049308)
chr7 (44-223)||(11081752-11081933)
chr7 (6-223)||(6046698-6046916)
chr7 (1-222)||(31434910-31435136)
chr7 (44-237)||(40281237-40281430)
chr7 (1-214)||(21990350-21990570)
chr7 (1-152)||(26295647-26295798)
chr7 (5-237)||(13099319-13099560)
chr7 (1-223)||(4295797-4296023)
chr7 (71-237)||(6349069-6349234)
chr7 (1-152)||(16296961-16297112)
chr7 (43-237)||(21678307-21678504)
chr7 (1-237)||(27832490-27832722)
chr7 (1-217)||(44724779-44725000)
chr7 (1-225)||(42223358-42223586)
chr7 (43-224)||(6067064-6067247)
chr7 (47-221)||(42330864-42331041)
chr7 (1-157)||(21592073-21592232)
chr7 (1-95)||(1850181-1850273)
chr7 (6-120)||(13290445-13290559)
chr7 (1-137)||(20137062-20137198)
chr7 (1-137)||(22393922-22394059)
chr7 (1-222)||(24748794-24749017)
chr7 (1-217)||(9679259-9679482)
chr7 (74-237)||(25276401-25276564)
chr7 (1-223)||(20626238-20626465)
chr7 (1-223)||(20630129-20630356)
chr7 (1-223)||(20642548-20642775)
chr7 (43-121)||(3320022-3320100)
chr7 (43-121)||(3324770-3324848)
chr7 (1-95)||(7471977-7472069)
chr7 (43-121)||(15540967-15541045)
chr7 (1-95)||(38394186-38394278)
chr7 (1-95)||(40946528-40946620)
chr7 (1-95)||(43253514-43253606)
chr7 (126-224)||(11355586-11355689)
chr7 (41-137)||(24465776-24465871)
chr7 (1-219)||(27306096-27306319)
chr7 (43-106)||(25405525-25405588)
chr7 (131-237)||(26214697-26214801)
chr7 (1-95)||(3035924-3036016)
chr7 (1-95)||(7470019-7470111)
chr7 (44-106)||(8378490-8378552)
chr7 (1-71)||(20297562-20297631)
chr7 (168-237)||(20297739-20297808)
chr7 (1-95)||(48457853-48457945)
chr7 (168-224)||(1046773-1046829)
chr7 (6-95)||(1046922-1047009)
chr7 (6-95)||(1049293-1049380)
chr7 (1-34)||(22251602-22251635)
chr7 (1-34)||(25276341-25276374)
chr7 (6-95)||(25351447-25351536)
chr7 (43-95)||(2075248-2075300)
chr7 (3-71)||(9681022-9681089)
chr7 (168-223)||(11759504-11759559)
chr7 (168-223)||(20299837-20299892)
chr7 (43-95)||(25410263-25410315)
chr7 (43-95)||(34546877-34546929)
chr7 (43-94)||(7069912-7069963)
chr7 (43-106)||(7074919-7074982)
chr7 (168-222)||(48458030-48458084)
chr7 (1-95)||(3878777-3878869)
chr7 (1-71)||(7094480-7094549)
chr7 (51-145)||(20091100-20091196)
chr7 (162-223)||(22137450-22137511)
chr7 (6-95)||(25357141-25357230)
chr7 (1-71)||(28487753-28487822)
chr7 (168-237)||(38394363-38394432)
chr7 (162-223)||(40552477-40552538)
chr7 (110-223)||(443908-444026)
chr7 (168-224)||(1049145-1049201)
chr7 (185-241)||(22280209-22280266)
chr7 (6-95)||(40836740-40836827)
chr7 (171-222)||(1502832-1502883)
chr7 (43-95)||(2121032-2121084)
chr7 (186-222)||(7092070-7092106)
chr7 (186-222)||(7094317-7094353)
chr7 (17-97)||(7351647-7351725)
chr7 (43-95)||(7464516-7464568)
chr7 (168-223)||(7471837-7471892)
chr7 (168-223)||(9027050-9027105)
chr7 (168-223)||(28487930-28487985)
chr7 (168-223)||(37411983-37412039)
chr7 (43-95)||(44010747-44010799)
chr7 (43-95)||(44016658-44016710)
[»] chr5 (79 HSPs)
chr5 (1-237)||(4897919-4898154)
chr5 (1-237)||(15445122-15445356)
chr5 (1-222)||(6661053-6661275)
chr5 (1-237)||(15143656-15143894)
chr5 (91-223)||(2144437-2144569)
chr5 (1-223)||(20054025-20054251)
chr5 (1-237)||(34033424-34033656)
chr5 (1-223)||(40221712-40221947)
chr5 (1-152)||(17413114-17413256)
chr5 (1-222)||(17818352-17818579)
chr5 (1-223)||(36402186-36402417)
chr5 (1-222)||(696067-696292)
chr5 (43-223)||(21288992-21289177)
chr5 (1-237)||(36208766-36209005)
chr5 (126-237)||(32521386-32521495)
chr5 (43-224)||(2724124-2724312)
chr5 (1-222)||(2818194-2818424)
chr5 (44-157)||(20043222-20043338)
chr5 (43-223)||(10474184-10474371)
chr5 (1-157)||(18596835-18596994)
chr5 (1-217)||(6745258-6745485)
chr5 (1-222)||(9020408-9020633)
chr5 (48-217)||(20505709-20505886)
chr5 (44-145)||(2954648-2954751)
chr5 (77-223)||(4754379-4754533)
chr5 (116-223)||(31465849-31465962)
chr5 (1-95)||(10529096-10529188)
chr5 (168-222)||(10587182-10587236)
chr5 (1-157)||(26097922-26098080)
chr5 (1-71)||(31472632-31472702)
chr5 (126-237)||(41585582-41585697)
chr5 (85-150)||(42771050-42771116)
chr5 (1-217)||(1189474-1189698)
chr5 (1-121)||(24127046-24127165)
chr5 (110-223)||(26098147-26098265)
chr5 (1-152)||(18511146-18511301)
chr5 (43-106)||(1170943-1171006)
chr5 (5-217)||(6747498-6747721)
chr5 (103-237)||(34530561-34530700)
chr5 (43-106)||(35385438-35385501)
chr5 (1-71)||(4236819-4236888)
chr5 (41-157)||(25904332-25904452)
chr5 (1-95)||(27912726-27912818)
chr5 (42-95)||(28786536-28786589)
chr5 (6-95)||(34477050-34477137)
chr5 (6-95)||(34479415-34479502)
chr5 (192-237)||(35430571-35430616)
chr5 (185-237)||(5777620-5777672)
chr5 (43-152)||(6756723-6756836)
chr5 (186-234)||(16776541-16776589)
chr5 (43-95)||(17841246-17841298)
chr5 (43-95)||(22672967-22673019)
chr5 (43-95)||(25445629-25445681)
chr5 (1-223)||(39854673-39854905)
chr5 (43-95)||(42238393-42238445)
chr5 (168-222)||(38882455-38882509)
chr5 (168-237)||(18469376-18469446)
chr5 (43-152)||(18509252-18509366)
chr5 (21-95)||(25452606-25452680)
chr5 (1-95)||(25921470-25921562)
chr5 (1-95)||(41585741-41585833)
chr5 (6-95)||(2175113-2175200)
chr5 (168-224)||(25804391-25804447)
chr5 (168-240)||(27912903-27912976)
chr5 (162-222)||(34476910-34476970)
chr5 (162-222)||(34479275-34479335)
chr5 (1-34)||(34530722-34530755)
chr5 (6-95)||(38882300-38882387)
chr5 (6-34)||(2144619-2144647)
chr5 (162-237)||(3372979-3373054)
chr5 (43-95)||(11962430-11962482)
chr5 (168-223)||(12555774-12555830)
chr5 (43-95)||(18466915-18466966)
chr5 (43-95)||(21684449-21684500)
chr5 (185-217)||(25445770-25445802)
chr5 (185-217)||(25452769-25452801)
chr5 (185-224)||(26406338-26406375)
chr5 (6-34)||(35430375-35430403)
chr5 (168-223)||(38959988-38960043)
[»] scaffold0468 (1 HSPs)
scaffold0468 (1-222)||(1509-1732)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-223)||(85429-85657)
[»] scaffold0224 (1 HSPs)
scaffold0224 (1-150)||(15761-15911)
[»] scaffold0057 (1 HSPs)
scaffold0057 (1-223)||(16516-16740)
[»] scaffold0131 (2 HSPs)
scaffold0131 (1-222)||(14247-14471)
scaffold0131 (1-71)||(15218-15287)
[»] scaffold0133 (1 HSPs)
scaffold0133 (5-239)||(5014-5247)
[»] scaffold0031 (1 HSPs)
scaffold0031 (1-223)||(79384-79615)
[»] scaffold0154 (1 HSPs)
scaffold0154 (1-157)||(11401-11562)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-217)||(80058-80283)
[»] scaffold0256 (1 HSPs)
scaffold0256 (43-121)||(16458-16534)
[»] scaffold1050 (1 HSPs)
scaffold1050 (43-106)||(3056-3119)
[»] scaffold1674 (1 HSPs)
scaffold1674 (168-237)||(1294-1363)
[»] scaffold0370 (2 HSPs)
scaffold0370 (168-225)||(1307-1364)
scaffold0370 (6-95)||(1450-1537)
[»] scaffold0005 (3 HSPs)
scaffold0005 (46-223)||(50257-50441)
scaffold0005 (46-223)||(52256-52440)
scaffold0005 (170-221)||(183500-183551)
[»] scaffold0267 (1 HSPs)
scaffold0267 (162-237)||(396-471)
[»] scaffold0209 (1 HSPs)
scaffold0209 (43-95)||(16983-17035)
[»] scaffold0038 (1 HSPs)
scaffold0038 (1-95)||(41480-41572)
[»] scaffold0025 (2 HSPs)
scaffold0025 (6-95)||(69289-69376)
scaffold0025 (186-222)||(69149-69185)
[»] scaffold0472 (1 HSPs)
scaffold0472 (162-237)||(6569-6644)
[»] scaffold0068 (1 HSPs)
scaffold0068 (43-95)||(29410-29461)


Alignment Details
Target: chr6 (Bit Score: 557; Significance: 0; HSPs: 80)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 557; E-Value: 0
Query Start/End: Original strand, 1 - 565
Target Start/End: Complemental strand, 28078285 - 28077721
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  28078285 tctcttttgtaaagttactcatcattatagtggattataagactgctctctccctcatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 28078186  T
Q  101 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatca 200  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078185 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatca 28078086  T
Q  201 agtattttattggtgtgattttttaaggaattcacaataagccccaataagtaaatttggtttaaatggaggagggtaattcaatggttagatgtagaag 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28078085 agtattttattggtgtgattttttaaggaattcacaataagccccaataagtaaatttggtttaaatggaggagggtaattcaatggttagatgtagaag 28077986  T
Q  301 gagataaaaatacgaagttgttttacataaatagctgaattatgtgcttatagcgtaaacacatatgatacaagtgcttatgtatgagctactatataac 400  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  28077985 gagataaaaatacgaagttgttttacataaatagctgaattatgtgcttatagcgtaaacacatatgatacaagtgcttatgtatgagctaatatataac 28077886  T
Q  401 acatattttccattgcagttggatcccctaattagacagttgttggctgaccaacagtaccggctggatgcactgtttatgctgttttttaggagcatgt 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28077885 acatattttccattgcagttggatcccctaattagacagttgttggctgaccaacagtaccggctggatgcactgtttatgctgttttttaggagcatgt 28077786  T
Q  501 aagtgtaaaattttgcacttcaattaaacttgtaatgcagataatctttctcataatgggatcag 565  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28077785 aagtgtaaaattttgcacttcaattaaacttgtaatgcagataatctttctcataatgggatcag 28077721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 1 - 339
Target Start/End: Complemental strand, 28037819 - 28037477
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattat---aagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||||||||||||||||||||| ||||||||       ||| |||||||||||||||  |||||||| |||| |||||| | |||||||||||||      
T  28037819 tctcttttgtaaagttactcatcataatagtggacggacgaaaggctgctctctcccccagtctaggtcagttttggaccgagctgggtaaacaaattgt 28037720  T
Q  98 gtgtgttctct-ttttctttctctcgctgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacac 196  Q
    || | || | | |||||||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||  ||||||||||||||||||||||    
T  28037719 gttttttttttcttttctttctctcgctgtttctactttttcttgtgtttataattgttcccatgttgatattggtcacttgattatttttgctccacac 28037620  T
Q  197 atcaagtatttt-attggtgtgattttttaaggaattcacaataagccccaataagtaaatttggtttaaatggaggagggtaattcaatggttagatgt 295  Q
    |||||||||||| ||||||||||||||| || |||||||||| |  ||| ||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  28037619 atcaagtatttttattggtgtgatttttcaacgaattcacaacataccc-aataagtaaatttggtttaaatggaggagggtaattcaatggttagaggt 28037521  T
Q  296 agaaggagataaaaatacgaagttgttttacataaatagctgaa 339  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28037520 agaaggagataaaaatacgaagttgttttacataaatagctgaa 28037477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 138; E-Value: 7e-72
Query Start/End: Original strand, 6 - 222
Target Start/End: Complemental strand, 25465676 - 25465460
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||    | |||||||||||| ||||||||| |||| | || |||||||| |||||||||||||| ||||||||    
T  25465676 tttgtaaagttactcatcattatagtggaacggaggactgctctctctcccatactatgtcagtattggaccgaactgggtaaacaaattttgtgtgttc 25465577  T
Q  106 tctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagta 204  Q
    ||| |||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||| |||||||||| ||||||||||    
T  25465576 tctctttctttctctcgctgttttctacttttgcttgagtttataattgttcccacgttgatattggttgcttgatta-ttttgctccatacatcaagta 25465478  T
Q  205 ttttattggtgtgatttt 222  Q
    ||||||||||||||||||    
T  25465477 ttttattggtgtgatttt 25465460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 16455515 - 16455282
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||| ||||||||||||||||||||    | | ||||||||||||||||||||||||| | || |||||||| | ||||||||||||||||    
T  16455515 tctcttttgtaaaattactcatcattatagtggaacggagggctgctctctcccccatactaggtcagtattggaccgaactgagtaaacaaatttcgtg 16455416  T
Q  101 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatca 200  Q
    |||||| | ||| | ||||  | | |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||  ||||||||||| ||||    
T  16455415 tgttctttcttt-tatctcatggt-tttctacttttgtttgtgtttataatttttcccacgttgatattggttgcttgatta-ctttgctccacatatca 16455319  T
Q  201 agtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||| |||||||| |  ||||||||||    
T  16455318 agtattttattggtttgatttttcatcgaattcacaa 16455282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 19696665 - 19696887
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||| ||||||||||||||||  | |   |||||||||| |||| ||||||||| | || |||||||| ||||||||||||||||||    
T  19696665 tctcttttgtaaagttattcatcattatagtggaacagatagctgctctctctcccagactaggtcagtattggaccgaactgggtaaacaaatttcgtg 19696764  T
Q  101 tgttctctttttctttctctcgctg--tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacaca 197  Q
    |||||||| ||||||||||||||||  |||||||||||| |||||||||||| | |  ||||| ||| | | |||||||||||||  |||||||||||||    
T  19696765 tgttctctctttctttctctcgctgtttttctacttttgtttgtgtttataactgtcacccactttg-tttcggttgcttgatta-ctttgctccacaca 19696862  T
Q  198 tcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||||||||||    
T  19696863 tcaagtattttattggtgtgatttt 19696887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 85 - 222
Target Start/End: Original strand, 22610985 - 22611122
Alignment:
Q  85 gtaaacaaatttcgtgtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattat 183  Q
    |||||||||||||||||||||||| ||||||| ||||  ||||| |||||||||||||||||||||||| ||||||| |||||||||||||||||||||     
T  22610985 gtaaacaaatttcgtgtgttctctctttctttttctcattgttttctacttttgcttgtgtttataattgttcccactttgatattggttgcttgatta- 22611083  T
Q  184 ttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||||||||||||||||||||||||    
T  22611084 ttttgctccacacatcaagtattttattggtgtgatttt 22611122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 6 - 150
Target Start/End: Complemental strand, 22858038 - 22857893
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||    | | ||||||||||||||| ||||||||| | || |||||||| | |||||||||||||||||||||    
T  22858038 tttgtaaagttactcatcattatagtggaacggatggctgctctctcccccagactaggtcagtattggaccgaactgtgtaaacaaatttcgtgtgttc 22857939  T
Q  106 tctttttctttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    ||| |||||||||||||||| ||| |||||||||||||||||||||    
T  22857938 tctctttctttctctcgctgttttgtacttttgcttgtgtttataa 22857893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 15346613 - 15346797
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctactttt-gctt 140  Q
    ||||||||||||||| |||||||||||||  |||||||| |||||||||||||||||||||||||| ||||||||||| | || ||||||||||| ||||    
T  15346613 ctgctctctcccccagactaggtcaatttg-gaccgaactgggtaaacaaatttcgtgtgttctctctttctttctcttgttgttttctacttttggctt 15346711  T
Q  141 gtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| ||||    || ||| | ||||||||||||||||   ||| |||||||||||||| | |||||||||||||||||    
T  15346712 gtgtttataattgttccatatactttg-ttttggttgcttgattatcacttgttccacacatcaagtttgttattggtgtgattttt 15346797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 3027943 - 3027705
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctccccc-atactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||| |||||| | ||||||||| |||| |||||||| || ||||||||||||||    
T  3027943 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctttccccccagactaggtcagtttttgaccgaactggataaacaaatttcgt 3027844  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    ||||||||| ||||||||||||| || |||||||||||| ||||| |||||||  |||||   ||| || || ||||||||| |||||||  ||||||||    
T  3027843 gtgttctctctttctttctctcgttgttttctacttttgacttgtatttataa--cttccatacac-tttat-ttggttgctcgattattacttgctcca 3027748  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||| || ||||| |||||||||||| |  ||||||||||    
T  3027747 cacatcaaata-tttatcggtgtgatttttcattgaattcacaa 3027705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 6 - 166
Target Start/End: Complemental strand, 12937278 - 12937117
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||    | | ||||||||||||| | ||||||||  |||| || ||||| |||||||||||||| ||||||||    
T  12937278 tttgtaaagttactcatcattatagtggaacggagggctgctctctcccc-agactaggtctgttttggaacgaaccgggtaaacaaattttgtgtgttc 12937180  T
Q  106 tctttttcttt-ctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgat 166  Q
    | | ||||||| |||||| ||||| |||||||||||||||||||||||| |||||||||||||    
T  12937179 tatctttcttttctctcgttgttttctacttttgcttgtgtttataattgttcccacgttgat 12937117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15367256 - 15367496
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctc-ccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    ||||| ||||||||||| ||||||| |||||| |    ||| |||||||||| ||||| |||||||||||||  |||||||| |||||||||||||| ||    
T  15367256 tctctattgtaaagttattcatcat-atagtgaaacggaaggctgctctctctccccagactaggtcaatttg-gaccgaactgggtaaacaaattttgt 15367353  T
Q  100 gtgttctctttttctttctctcg-ctgtttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| |||||||||||||  | ||||||||||| |||||||||||||||| ||||   ||| ||| | ||||||||||||||||    |||||||    
T  15367354 gtgttctctctttctttctctcgtatttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacatgctcca 15367452  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | ||||||||||||||||| |  ||||||||||    
T  15367453 cacatcaagtttgttattggtgtgatttttcatcgaattcacaa 15367496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 473 - 562
Target Start/End: Complemental strand, 28037083 - 28036995
Alignment:
Q  473 ctgtttatgctgttttttaggagcatgtaagtgtaaaattttgcacttcaattaaacttgtaatgcagataatctttctcataatgggat 562  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||    
T  28037083 ctgtttatgctgtttttgaggagcatgcaagtgtaaaattttgcacttcaattaaacttgtaa-gcagataatatttctcataatgggat 28036995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 30443554 - 30443752
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt---cgtgtgttctctttttctttctctcgctg-tttctacttttgc 138  Q
    ||||||||||||| | ||||||| | | || |||||||| ||||||||||||||    |||| |||||| ||||||||| ||| || |||||| ||||||    
T  30443554 ctgctctctccccgagactaggtaagtattggaccgaactgggtaaacaaatttttgtgtgttttctctctttctttctttcgttgttttctatttttgc 30443653  T
Q  139 ttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| |||| || ||||| |||||||||||| ||||||||||||| ||| |||||| ||||||||| ||||| |||||||| || ||||||||||    
T  30443654 ttgtgtttaaaattgttacccactttgatattggtttcttgattattttt-ctcaacacataaagtatttttttggtatgatttttcaacgaattcacaa 30443752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 13057419 - 13057643
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |    | | || |||||||||||| |||||||||||||  ||||||||  ||| |||||||| |  |    
T  13057419 tctcttttgtaaggttactcatcattatagtgaaacggagggctactctctcccccaaactaggtcaatttg-gaccgaactcggtcaacaaattctttt 13057517  T
Q  100 gtgttctctttttcttt-ctctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    ||||||||| ||||||| ||||  |||||| ||||||||| ||||| |||||||| || ||||| ||  ||||||||||||||||||  |||||||||||    
T  13057518 gtgttctctctttcttttctctatctgttttctacttttgtttgtgattataattgttgcccacttt--tattggttgcttgattatcctttgctccaca 13057615  T
Q  196 catcaagtattttattggtgtgattttt 223  Q
    |||||||| | |||||||||||||||||    
T  13057616 catcaagtttgttattggtgtgattttt 13057643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 12186161 - 12186003
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||| || |  ||||||||||||| | ||||||| ||||||||||||| |  |    
T  12186161 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctgcctcggactaggtcaatttga-accgaactgggtaaacaaattatttt 12186063  T
Q  100 gtgttctctttttctttctctcgctg-tttctac-ttttgcttgtgtttataattcttcc 157  Q
    ||||||||| |||||||||||||||| ||||||| |||| ||||||||||||||| ||||    
T  12186062 gtgttctctctttctttctctcgctgttttctactttttccttgtgtttataattgttcc 12186003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 25078647 - 25078418
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||| |||||| ||||||    | ||||||| ||| |||  | |||||||| | || |||||||| |||||||||||||| |||    
T  25078647 tctcttttgtaaagttactcgtcattacagtggaacggaggactgctttcttcccagt-ctaggtcagtattggaccgaactgggtaaacaaattttgtg 25078549  T
Q  101 tgttctctttt-tctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    |||||||| || | |||||||  |||||| ||||| ||||||      |||||| || |||||||||||||||||| | ||||| |||  ||||||||||    
T  25078548 tgttctctcttctttttctctaactgttttctactcttgctt------ataattgtttccacgttgatattggttgttcgattacttta-ctccacacat 25078456  T
Q  199 caagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||| ||||||||| |||||| ||||||||||    
T  25078455 caagtattttactggtgtgat-ttttaacgaattcacaa 25078418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 30445899 - 30445979
Alignment:
Q  156 cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||| ||||||||| ||||||||||    
T  30445899 cccacgttgatattggttgcttgattatttt-gctccacacataaaatattttattggtgttattttttaacgaattcacaa 30445979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 26945369 - 26945521
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||| ||    | | | |||||| |||||| | || ||||  ||| |||||||| ||||||||||||||||||    
T  26945369 tctcttttgtaaagttactcatcattatagtagaacgaagggcagctctcccccccagattatgtcaggtttggaccgaactgggtaaacaaatttcgtg 26945468  T
Q  101 tgttctctttttc-tttctctcgctg-tttctactttt-gcttgtgtttataa 150  Q
    | |||||| |||| |||||||||||| ||||||||||| ||||||||||||||    
T  26945469 tcttctctctttcttttctctcgctgttttctacttttggcttgtgtttataa 26945521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 11983118 - 11982874
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||   |||     
T  11983118 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 11983021  T
Q  98 gtgtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttg 188  Q
    ||||  |||||| || ||||||||||||    ||||||||||| ||||||| || ||||| ||||   ||| ||| | |||||||||||||||||  |||    
T  11983020 gtgttctctcttcttttttctctcgctgttgttttctacttttggcttgtgattgtaattgttccatacactttg-ttttggttgcttgattattccttg 11982922  T
Q  189 ctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  11982921 ctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 11982874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 15719867 - 15720018
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctccccc-atactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    |||||||||||||||||||||||||||||||| |  | |    |||||| |||||| |||||||||||||||  ||||||||  |||||||||||||| |    
T  15719867 tctcttttgtaaagttactcatcattatagtgaaacagagagttgctctttccccccatactaggtcaatttg-gaccgaacttggtaaacaaatttcat 15719965  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    ||||||||| |||| |||||||||||| |||||| ||||| ||||| ||||||    
T  15719966 gtgttctctctttcttttctctcgctgttttctatttttgtttgtgattataa 15720018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 17012265 - 17012500
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattata-agactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    ||||||||||||||||||||||| |||||| |||  ||| ||| |  ||||||||||| ||||||||| | || ||||||||  |||||||||||||| |    
T  17012265 tctcttttgtaaagttactcatcgttatag-ggaacatagaga-tcatctctcccccagactaggtcagtattggaccgaactaggtaaacaaatttcat 17012362  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataa--ttcttcccacgttgatattggttgcttgattatt-tttgctccac 194  Q
     |  ||||| |||||||||||| || ||| ||||||||| ||||||||| |||  ||| | | || ||| | ||||||||||||||||| ||||||||||    
T  17012363 at--tctctctttctttctctcactattttctacttttggcttgtgttt-taacgttcatac-actttgtt-ttggttgcttgattattatttgctccac 17012457  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| |||||||||| |  ||||||||||    
T  17012458 acatcaagtattttattgttgtgatttttcatcgaattcacaa 17012500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 6 - 116
Target Start/End: Complemental strand, 12911531 - 12911421
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||    | | ||||||||||||||| ||||||||  |||| || ||||| |||||||||||||| ||||||||    
T  12911531 tttgtaaagttactcatcattatagtggaacggagggctgctctctcccccagactaggtctgttttggaacgaaccgggtaaacaaattttgtgtgttc 12911432  T
Q  106 tctttttcttt 116  Q
    | | |||||||    
T  12911431 tatctttcttt 12911421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 3629912 - 3629733
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt--gc 138  Q
    ||||||||||||| |||||||||||| ||| |||||||| |||| |||||||| |  |||||||||| ||  ||||||||| || |||||||||||  ||    
T  3629912 ctgctctctcccc-atactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttcttttctctcgttgttttctactttttggc 3629815  T
Q  139 ttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||| ||||   ||| ||| | ||||||||||||||||  ||||||||||||||||||| | |||||||||||    
T  3629814 ttgtgtttataattgttccatacactttg-ttttggttgcttgattatcctttgctccacacatcaagtttgttattggtgtg 3629733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 14466548 - 14466701
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||| |||||||||||||| |    | ||||||| | |||||||||||||||||| ||| |||||||| |||| | |||||| || |    
T  14466548 tctcttttgtaaggttattcatcattatagtgaaccggatgactgctgtttcccccatactaggtcaa-tttggaccgaactgggtcagcaaattctctt 14466646  T
Q  100 gtgttctctttttctttctctcgctg----tttctacttttgcttgtgtttataa 150  Q
    ||||||||| ||||||||||||||||    |||||||||||| ||||| ||||||    
T  14466647 gtgttctctctttctttctctcgctgctgttttctacttttgtttgtgattataa 14466701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 30728913 - 30728675
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||| |||||||||||    ||| |||||||||||| || |||||||||| ||| |||| ||| |||| |||||||| |  |    
T  30728913 tctcttttgtaaagttactcat-attatagtggaacggaaggctgctctctcccgcagactaggtcaa-tttggaccaaactgggtcaacaaattctttt 30728816  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||| ||| || |||  |||||||||| |||||||||||| ||||| ||||||||| ||||   ||| ||| | ||||||| |||| |||   ||||||    
T  30728815 gtgttatctcttcctttctctctcgctgttttctacttttgacttgtatttataattgttccatacactttg-ttttggttgtttgactatcccttgctc 30728717  T
Q  192 cacacatcaagtattttattggtgtgattttttaaggaattc 233  Q
    |||||||||||| | ||||||||||||||||| || ||||||    
T  30728716 cacacatcaagtttgttattggtgtgatttttcaacgaattc 30728675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 175 - 237
Target Start/End: Original strand, 7294197 - 7294258
Alignment:
Q  175 cttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||||| ||||||||||    
T  7294197 cttgattaatttt-ctccacacatcaagtattttattggtgtgattttttaacgaattcacaa 7294258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 42 - 108
Target Start/End: Original strand, 11262724 - 11262790
Alignment:
Q  42 actgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctct 108  Q
    |||||||||||||||| ||||||||| | || |||||||| ||||||||||||||||||||||||||    
T  11262724 actgctctctcccccagactaggtcagtattggaccgaacggggtaaacaaatttcgtgtgttctct 11262790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 13039979 - 13040132
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |    | | ||||||||||||| | |||||||||| |||||||||||| |||| |||||||| |  |    
T  13039979 tctcttttgtaaggttactcatcattatagtgaaacggagggctgctctctcccctagactaggtcaa-tttagaccgaactgggtcaacaaattctttt 13040077  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataatt 152  Q
    ||||||||| |||| ||||||||| || |||||||||||| || || ||||||||    
T  13040078 gtgttctctctttcttttctctcgttgttttctacttttgtttatgattataatt 13040132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 130 - 222
Target Start/End: Complemental strand, 6610469 - 6610378
Alignment:
Q  130 tacttttgcttgtgtttataattcttc-ccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||| ||||||||||| ||  |||| ||| | ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||    
T  6610469 tacttttgcttatgtttataattgttatccactttgtt-ttggttgcttgattatttt-gctccacacattaagtattttattggtgtgatttt 6610378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 9020151 - 9020382
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||| |      | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  9020151 tctcttttgtaaagttactcatcat-atagtgaaacggggggctgctctctcccccaaactaggtcaa-tttggaccgaactgggtcaacaaattctttt 9020248  T
Q  100 gtgttctctttttc--tttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttg 188  Q
    ||||||||| || |  ||||||||||||    ||||||||||| |||||| ||||||||| ||||   ||| ||| | |||||||  ||||||| | |||    
T  9020249 gtgttctctcttcccttttctctcgctgttgttttctacttttggcttgtatttataattgttccatacactttg-ttttggttgtctgattatctcttg 9020347  T
Q  189 ctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||| | |||||||||||||||||    
T  9020348 ctccacacatcaagtttgttattggtgtgattttt 9020382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 32280221 - 32280461
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||| |||||||  |    | | ||||||||||||||| |||||||||||||  ||||||||  ||| || ||||| || |    
T  32280221 tctcttttgtaaagttactcatcgttatagtaaaacggagggctgctctctcccccagactaggtcaatttg-gaccgaacttggtcaaaaaattctctt 32280319  T
Q  100 gtgttctctttttctttctctc--gctgttt-ctacttttg-cttgtgtttataattctt-cccacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||||| || |||||||||  | | ||| ||||||||| ||||| ||||||||| || ||||| ||| ||||||||||||||||||   || |||||    
T  32280320 gtgttctctcttcctttctctcatgttattttctacttttggcttgtatttataattgttacccac-ttg-tattggttgcttgattatcacttactcca 32280417  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
     ||||||||| | ||||| |||||||||||||  ||||||||||    
T  32280418 tacatcaagtttgttatttgtgtgattttttatcgaattcacaa 32280461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 14458856 - 14458764
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||| | | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  14458856 tctcttttgtaacgttactcatcat-atagtggatcagagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 14458764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 24338536 - 24338297
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaat-ttcgt 99  Q
    |||||||||||| ||||||||||||||||||| |    | | ||||||||  ||||| |||| ||||||||  ||||||||  ||||||||||| ||  |    
T  24338536 tctcttttgtaaggttactcatcattatagtgaaacggagggctgctctc--ccccagactatgtcaatttg-gaccgaactaggtaaacaaatattttt 24338440  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttgctt-gtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||| ||| ||  ||||||||| ||||| ||||||||| || |||||||||||| ||||   ||| ||| | |||||||||||| ||| | ||||||||    
T  24338439 gtgttatctcttcttttctctcgttgttttctacttttggtttgtgtttataattgttccatacactttgtt-ttggttgcttgactatctcttgctcca 24338341  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | |||||| |||||||||| |  ||||||||||    
T  24338340 cacatcaagtttgttattgatgtgatttttcatcgaattcacaa 24338297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 3918772 - 3918840
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| ||| |||||||| || |||||||||||||||||||||||| || ||||||||||    
T  3918772 ttggttgcttgattaattt-gctccacaaattaagtattttattggtgtgatttttcaacgaattcacaa 3918840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 22870019 - 22869952
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| |||| ||| ||||||||||||||||||||||||||| |||||| ||||||||||    
T  22870019 ttggttgcttgattaatttt-ctcaacacatcaagtattttattggtgtgat-ttttaacgaattcacaa 22869952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 124
Target Start/End: Complemental strand, 35201376 - 35201295
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgct 124  Q
    ||||||||||||| | ||||||||| | ||||||||||| |||||||||||| || |||||||||| | ||| |||||||||    
T  35201376 ctgctctctccccaagactaggtcattattagaccgaactgggtaaacaaatatcttgtgttctctctctctctctctcgct 35201295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 83 - 222
Target Start/End: Complemental strand, 26505395 - 26505254
Alignment:
Q  83 gggtaaacaaatttcgtgtgttctctttttc--tttctctcgctg-tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttg 178  Q
    ||||||||||||||| |||||||||| ||||  ||||||||| || ||||||||||| |||||||||| || | || ||||||||| | || |||| |||    
T  26505395 gggtaaacaaatttcatgtgttctctctttctttttctctcgttgttttctactttttcttgtgtttacaactgttacccacgttg-ttttagttgtttg 26505297  T
Q  179 attatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||  |||| ||||||||| || |||||||||| |||||||||    
T  26505296 atta-atttgttccacacataaaatattttattgatgtgatttt 26505254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 358 - 401
Target Start/End: Complemental strand, 28037478 - 28037435
Alignment:
Q  358 aacacatatgatacaagtgcttatgtatgagctactatataaca 401  Q
    |||||||||||| |||||||||||||||||||||||||||||||    
T  28037478 aacacatatgattcaagtgcttatgtatgagctactatataaca 28037435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 3390604 - 3390674
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||||||||||||| |||| |    | | |||||||||||||||||||||||||||||    
T  3390604 tctcttttgtaaagttactcatcattacagtgaaacggagggctgctctctcccccatactaggtcaattt 3390674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 4816320 - 4816228
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  4816320 tctcttttgtaacggtactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 4816228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 67
Target Start/End: Original strand, 30445749 - 30445815
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtca 67  Q
    ||||||||||||||||||||||||||||||||||    |  |||||||||||| |||||||||||||    
T  30445749 tctcttttgtaaagttactcatcattatagtggaacggagaactgctctctccaccatactaggtca 30445815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 99 - 239
Target Start/End: Original strand, 22490937 - 22491079
Alignment:
Q  99 tgtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattctt-cccacgttgatattggttgcttgattattttt-gctccac 194  Q
    |||| ||||| ||||||||||||| ||||| ||||||||| | | ||||||||||| || ||||| ||| | ||||||||||||||||  || |||||||    
T  22490937 tgtgctctctctttctttctctcgttgttttctacttttggcctatgtttataattgttacccac-ttgtt-ttggttgcttgattatccttagctccac 22491034  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaata 239  Q
    |||| |||| | ||||||||||||||||| |  ||||||||||||    
T  22491035 acattaagtttgttattggtgtgatttttcatcgaattcacaata 22491079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 13878859 - 13878922
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  13878859 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 13878922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 13883607 - 13883670
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  13883607 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 13883670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 16786051 - 16786114
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  16786051 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 16786114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 22857888 - 22857845
Alignment:
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||||||||||||||| || ||||||||||    
T  22857888 cacatcaagtattttattggtgtgatttttcaacgaattcacaa 22857845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 33215960 - 33216026
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    ||||||| |||||||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||    
T  33215960 ctgctctatcccccatactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttt 33216026  T

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Target: chr6; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 1230338 - 1230246
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  1230338 tctcttttgtaacgttactcatcat-atagtggaacggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 1230246  T

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Target: chr6; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 30967426 - 30967518
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   |   ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  30967426 tctcttttgtaacgttactcatcat-atagtggatcggagagctgctctctcccccaaactaggtcaa-tttggaccgaactgggtcaacaaatt 30967518  T

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Target: chr6; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 116 - 217
Target Start/End: Original strand, 3394708 - 3394815
Alignment:
Q  116 tctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtatttta 209  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||   ||| ||| | ||||||||||||||||   || ||||||||||||||  |||||    
T  3394708 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcttgattatccatttctccacacatcaagattttta 3394807  T
Q  210 ttggtgtg 217  Q
    ||||||||    
T  3394808 ttggtgtg 3394815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 19704651 - 19704564
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  19704651 tttgtaacggtactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 19704564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 20915440 - 20915353
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  20915440 tttgtaacggtactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 20915353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 14 - 71
Target Start/End: Original strand, 25477519 - 25477576
Alignment:
Q  14 gttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||||| |  | | | |||||||||||||||||||||||||||||    
T  25477519 gttactcatcattatagtgaaacagagggctgctctctcccccatactaggtcaattt 25477576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 232
Target Start/End: Original strand, 3919171 - 3919234
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaatt 232  Q
    ||||||||||||||| ||| |||| ||| || |||||||||||||||||||||||| || |||||    
T  3919171 ttggttgcttgattaattt-gctctacaaattaagtattttattggtgtgatttttcaaagaatt 3919234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 25 - 97
Target Start/End: Complemental strand, 5273282 - 5273211
Alignment:
Q  25 ttatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||||    
T  5273282 ttatagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatttc 5273211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 25941802 - 25941854
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  25941802 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 25941854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 5273133 - 5273071
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||||    
T  5273133 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttt 5273071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 6843487 - 6843591
Alignment:
Q  131 acttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaagga 229  Q
    |||||||||||||||||||||| |  ||||| || |||||||||| ||| |||  ||||||||||||||||||| ||| || | ||||| ||||||| ||    
T  6843487 acttttgcttgtgtttataattgtcgcccacattaatattggttgattgttta-atttgctccacacatcaagt-tttcatcgatgtga-tttttaacga 6843583  T
Q  230 attcacaa 237  Q
    ||||||||    
T  6843584 attcacaa 6843591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 17038367 - 17038430
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| ||| |||||   ||||||||||| |||||||||||| || ||||||||    
T  17038367 ctgctctctcccccagacttggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 17038430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 240
Target Start/End: Complemental strand, 24501375 - 24501300
Alignment:
Q  162 ttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaataa 240  Q
    ||||||||||||||||| ||| |||  ||| |||||||| ||  |||||||||||||||||| || |||||||||||||    
T  24501375 ttgatattggttgcttggttaattta-ctctacacatcatgt--tttattggtgtgatttttcaacgaattcacaataa 24501300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 8717266 - 8717197
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  8717266 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 8717197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 106
Target Start/End: Complemental strand, 26887271 - 26887213
Alignment:
Q  48 ctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    |||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  26887271 ctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 26887213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28241410 - 28241318
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| ||   | | ||||||||||||||| ||||||| || ||| |||||||| |||| ||||||||    
T  28241410 tctcttttgtaacgttactcatcat-atagtgaatcggagggctgctctctcccccagactaggtgaa-tttggaccgaactgggtcaacaaatt 28241318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 29754620 - 29754551
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  29754620 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 29754551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 30034516 - 30034463
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||  |||||||| ||||||||| | ||||||||||||||||    
T  30034516 ttggttgcttgattatccttgctccatacatcaagt-tgttattggtgtgatttt 30034463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 30034692 - 30034600
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||| ||||   | | ||||||||||||||| ||| |||||| ||| |||||||| |||| ||||||||    
T  30034692 tctcttttgtaacgttactcatcat-atagcggatcggagggctgctctctcccccagactgggtcaa-tttggaccgaactgggtcaacaaatt 30034600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 2628803 - 2628743
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||    
T  2628803 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 2628743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 184 - 237
Target Start/End: Complemental strand, 12911423 - 12911371
Alignment:
Q  184 ttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||| ||||||||||||| |||||||||||||| | ||||||| ||||||||||    
T  12911423 ttttcctccacacatcaattattttattggtgt-aatttttaacgaattcacaa 12911371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 190 - 223
Target Start/End: Original strand, 20544843 - 20544876
Alignment:
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||||||||| ||||||||||    
T  20544843 tccacacatcaagtattttattgatgtgattttt 20544876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 86 - 147
Target Start/End: Complemental strand, 26455163 - 26455099
Alignment:
Q  86 taaacaaatttcgtgtgttctctttttc--tttctctcgctgttt-ctacttttgcttgtgttta 147  Q
    |||||||||||| |||||||||| ||||  |||||||||| |||| |||||||| ||||||||||    
T  26455163 taaacaaatttcatgtgttctctctttctttttctctcgcagtttcctactttttcttgtgttta 26455099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #71
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 237
Target Start/End: Original strand, 33216104 - 33216157
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtgattttt-taaggaattcacaa 237  Q
    |||||||||| |||||||| ||||||||||||| |||||  |||||||||||||    
T  33216104 tttgctccacgcatcaagttttttattggtgtggtttttacaaggaattcacaa 33216157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 1230160 - 1230105
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | ||| |||||||||||||| | |||||||||||||||||    
T  1230160 ttggttgcttgattatctcttgatccacacatcaagt-tgttattggtgtgattttt 1230105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 4816142 - 4816087
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  4816142 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 4816087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 12195431 - 12195356
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| |||||||||| |||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  12195431 ttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 12195356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 14507224 - 14507173
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  14507224 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 14507173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 17694901 - 17694849
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||| | |||||||||   ||||||||||| |||||||||||||    
T  17694901 ctgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaatt 17694849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 18322495 - 18322550
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  18322495 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 18322550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 22342850 - 22342798
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||| | |||||||||   ||||||||||| |||||||||||||    
T  22342850 ctgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaatt 22342798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 25465948 - 25465896
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||| ||   ||||||||||| |||||||||||||    
T  25465948 ctgctctctcccccagactaggccatcattagaccgaactgggtaaacaaatt 25465896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 26932474 - 26932419
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  26932474 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 26932419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 131; Significance: 1e-67; HSPs: 93)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 16561657 - 16561878
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||| ||||||  | | |  |||||||||||  | ||||||||| | || |||||||| | ||||||||||||||||    
T  16561657 tctcttttgtaaagttactcatcattacagtggaacaaagggttgctctctcccatagactaggtcagtattggaccgaactgtgtaaacaaatttcgtg 16561756  T
Q  101 tgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatc 199  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| |||||||||||    
T  16561757 tgttctctctttctttctctcgccgttttctacttttgcttgtgtttataattgttctcacgttgatattggttgcttgattattttt-ctccacacatc 16561855  T
Q  200 aagtattttattggtgtgatttt 222  Q
    |||||||||||||||||||||||    
T  16561856 aagtattttattggtgtgatttt 16561878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 13125549 - 13125316
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    |    ||||||| ||||| |||||||||| | |  ||||||||  |||||||||||||| ||    
T  13125549 tctcttttgtaaagttactcatcattatagtggaacggagagttgctctcccccccttactaggtcagtataggaccgaactaggtaaacaaatttcatg 13125450  T
Q  101 tgttctct-ttttctttctctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacaca 197  Q
    |||||||| |||||||||||||| ||||| |||||||||||||||||||||| | |  ||||| ||| | ||||||||||||||||||||||||||||||    
T  13125449 tgttctctcttttctttctctcgttgttttctacttttgcttgtgtttataactgtcacccac-ttgtt-ttggttgcttgattatttttgctccacaca 13125352  T
Q  198 tcaagtattttattggtgtgattttttaaggaattc 233  Q
    ||||||| |||||||||||||||||| || ||||||    
T  13125351 tcaagtaatttattggtgtgatttttgaacgaattc 13125316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 18800664 - 18800439
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| |    |  |||||||||||||||| ||||||| | |||| |||| ||||||||||||||||||||||    
T  18800664 tctcttttgtaaagttactcatcattatagtgaagcggagaactgctctctcccccaaactaggttagttttggaccaaacagggtaaacaaatttcgtg 18800565  T
Q  101 tgttctcttttt-ctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    ||||||||||||  ||||||||| || ||||||||||| ||||||||||||||  |||||   ||| ||| | ||| ||||||||||||| ||||||| |    
T  18800564 tgttctctttttgttttctctcgttgttttctacttttggcttgtgtttataa--cttccatacactttg-ttttgattgcttgattattatttgctcta 18800468  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| |||||||||||||    
T  18800467 cacatcaagtattttgttggtgtgatttt 18800439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15916580 - 15916819
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||| ||||||||||| |||||||||||||    | | ||||||||||||||| |||||||||||||| |||||||| |||||||||||||| |||    
T  15916580 tctcttttataaagttactcgtcattatagtggaacggagggctgctctctcccccagactaggtcaattttggaccgaactgggtaaacaaattttgtg 15916679  T
Q  101 tgttctctttttctttctctcgctg--tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
     ||||||| ||||||| ||||||||  ||||||||||| ||||||||||||||  |||||   ||| ||| | |||||||||||||| ||  ||||||||    
T  15916680 cgttctctctttctttttctcgctgtttttctacttttggcttgtgtttataa--cttccatacactttg-ttttggttgcttgattgttacttgctcca 15916776  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||| ||||||||||||| |||| |  ||||||||||    
T  15916777 cacatcaagta-tttattggtgtgacttttcatcgaattcacaa 15916819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 77 - 222
Target Start/End: Original strand, 43104452 - 43104599
Alignment:
Q  77 cgaacagggtaaacaaatttcgtgtgttctcttt--ttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggtt 173  Q
    ||||| |||||||||||||||||||||||||| |  ||| |||||||||||||| |||||||||||||||||| ||||| ||||||||||||||| ||||    
T  43104452 cgaactgggtaaacaaatttcgtgtgttctctctctttccttctctcgctgttttctacttttgcttgtgtttgtaattgttcccacgttgatatcggtt 43104551  T
Q  174 gcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||| ||||||| |||| ||||| |||||||||||||| |||||    
T  43104552 gcttgatta-ttttgcttcacatatcaaatattttattggtgtaatttt 43104599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 26613331 - 26613096
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||| ||||||||| ||||||||||||||  | |   || |||||||||||| | ||||||| | || |||||||| |||||||||||||| |||    
T  26613331 tctcttttggaaagttactaatcattatagtggaacagagagcttctctctcccccagattaggtcagtatttgaccgaactgggtaaacaaattttgtg 26613232  T
Q  101 tgttctctttttctttctctcgctg--tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    |||||||| ||||||||||||| ||  ||||||||||| |||||||| |||| | |  ||   || || ||||||||||||||| ||||||||||||| |    
T  26613231 tgttctctctttctttctctcgttgtttttctactttttcttgtgttaataactgtcacctacttaat-ttggttgcttgatta-ttttgctccacacgt 26613134  T
Q  199 caagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| |||||||||| ||||||| ||||||||||    
T  26613133 caagtatttcattggtgtga-tttttaacgaattcacaa 26613096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 8349143 - 8348907
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||| ||||||||||||||||||||||| || | |  || ||||||||| | |||| |||| ||||||||||||| |||||||||||||| |||    
T  8349143 tctcttttgttaagttactcatcattatagtggaatagagggttgttctctccccaagactatgtcagttttagaccgaactgggtaaacaaattttgtg 8349044  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    |||||||| |||||||||||   || |||||||||||| ||||||||||||  |||||   ||| |||   |||||||||||||||||  ||| ||||||    
T  8349043 tgttctctctttctttctctaattgttttctacttttgtttgtgtttataa--cttccatacactttg--tttggttgcttgattattacttgttccaca 8348948  T
Q  196 catcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    | |||||| ||||||||||||||||||| |  ||||||||||    
T  8348947 cgtcaagt-ttttattggtgtgatttttcatcgaattcacaa 8348907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30790492 - 30790266
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||||| |  | ||||||||||| ||| | ||||||||| |||| |||||||| || |||||||| ||||||    
T  30790492 tctcttttgtaaagttactcatcattatagtggaatggatgactgctctcttccc-agactaggtcagttttggaccgaactggataaacaaaattcgtg 30790394  T
Q  101 tgttctctttttctttctctcgctg-----tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctc 191  Q
    ||| |||| ||||||||||||||||     || ||| ||||| ||||||||||||  |||||   ||| ||| | |||||||||||||||||  |||||     
T  30790393 tgtgctctctttctttctctcgctgtctttttactatttttgtttgtgtttataa--cttccatacactttg-ttttggttgcttgattattacttgctt 30790297  T
Q  192 cacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||| |||||||||||||||||||||    
T  30790296 cacacatcaggtattttattggtgtgatttt 30790266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 9241177 - 9240937
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | |||||||||||||||||||||||||| ||| |||||||| ||| ||||||||| |  |    
T  9241177 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccatactaggtcaa-tttggaccgaactggggaaacaaattctttt 9241079  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
     |||||||| |||||||||||||||| ||||||||||| | |||| ||||||||| || |   ||| ||| | ||||||||||||||||   ||||||||    
T  9241078 ttgttctctctttctttctctcgctgttttctacttttggtttgtatttataattgtttcatacactttg-ttttggttgcttgattatcacttgctcca 9240980  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcaca 236  Q
    ||| |||||| | |||||||||||||||||||  |||||||||    
T  9240979 cacttcaagtttgttattggtgtgattttttatcgaattcaca 9240937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 30738721 - 30738481
Alignment:
Q  1 tctcttttgtaaagttactcatcat--tatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcg 98  Q
    |||||||||||||||||||||||||  ||||||| |    | |  ||||||||| |||||||||||||| | || |||| |||  |||||||||||||||    
T  30738721 tctcttttgtaaagttactcatcatattatagtgaaacggagggatgctctctcacccatactaggtcagtattggaccaaacttggtaaacaaatttcg 30738622  T
Q  99 tgtgttctct-ttttctttctctcgctgttt---ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccac 194  Q
    |||||||||| ||||||||||||| || |||   ||||| |||||||||||||||||| || ||||||||||||| ||||||||||||  |||  | |||    
T  30738621 tgtgttctctcttttctttctctcactattttttctactcttgcttgtgtttataattgtttccacgttgatatttgttgcttgatta-atttatttcac 30738523  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
     |||||| |||||||||  ||||| ||||||| ||||||||||    
T  30738522 ccatcaaatattttattaatgtga-tttttaacgaattcacaa 30738481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 8347364 - 8347214
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||| |||||||||||    | |  |||||| ||||| | ||||||||| |||| ||||||||| || ||||||||||||||    
T  8347364 tctcttttgtaaagttactcattattatagtggaacggagggatgctctttcccctagactaggtcagttttggaccgaacaagggaaacaaatttcgtg 8347265  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    |||||||| ||||||||| |||||| ||||||||||||||| |||||||||    
T  8347264 tgttctctctttctttctatcgctgttttctacttttgcttatgtttataa 8347214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 204
Target Start/End: Complemental strand, 13127779 - 13127575
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||| ||    |   ||||||||||| ||| ||||||| | | || |||||||| ||||||||||||||| ||    
T  13127779 tctcttttgtaaagttactcatcattatagtagaacggagagctgctctctcctccagactaggttagtattggaccgaaccgggtaaacaaatttcatg 13127680  T
Q  101 tgttctct-ttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacaca 197  Q
    |||||||| |||||||| ||||  || ||||| ||||||||||||||||||| | |  ||||| ||| | ||||||||||||||||||||||||||||||    
T  13127679 tgttctctcttttctttatctcattgttttctccttttgcttgtgtttataactgtcacccac-ttg-ttttggttgcttgattatttttgctccacaca 13127582  T
Q  198 tcaagta 204  Q
    |||||||    
T  13127581 tcaagta 13127575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 28279456 - 28279693
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagact-gctctctccccc-atactaggtcaattttagaccgaacagggtaaacaaatttc- 97  Q
    |||||||||||||||||||||||||||||||||| | | ||| | | ||| |||||| | ||||||||| | ||||| ||||| ||||||||||||||      
T  28279456 tctcttttgtaaagttactcatcattatagtggaat-tgagagttgttctttccccctagactaggtcagtattagatcgaactgggtaaacaaattttt 28279554  T
Q  98 gtgtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccaca 195  Q
    ||||||||||| |  |||| | ||| ||||| ||||||| |||||||||||||||| |  ||||||||||| ||||||| ||| |||  || ||||||||    
T  28279555 gtgtgttctctctccctttttttcgttgttttctactttcgcttgtgtttataattgtcacccacgttgat-ttggttgtttgtttaactt-gctccaca 28279652  T
Q  196 catcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||||||||| ||||||| ||||||||||    
T  28279653 catcaagtattttattggtgtga-tttttaacgaattcacaa 28279693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 42922420 - 42922570
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||| ||||||    | ||||||||||| ||||  ||||||||| | || |||||||| |||||||||||||| |||    
T  42922420 tctcttttgtaaagttactcatcattagagtggaacggaggactgctctctgcccccgactaggtcagtgttggaccgaactgggtaaacaaattttgtg 42922519  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    |||| ||| |||||||||| || || |||||||||||| ||||||||||||    
T  42922520 tgttatctctttctttctcccgttgttttctacttttgtttgtgtttataa 42922570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 17186219 - 17185995
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||| ||||    |   ||||||||||||||| |||||||||||||  |||||||  ||||||||||||| |  |    
T  17186219 tctcttttgtaaagttactcatcattataatggaacggagtgctgctctctcccccagactaggtcaatttg-gaccgaattgggtaaacaaattctttt 17186121  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||| ||||||  |||||   ||| ||| | |||||||||||| |||   |||||||||    
T  17186120 gtgttctctctttctttctctcgctgttttctacttttgtttgtgattataa--cttccatacactttg-ttttggttgcttgactatcacttgctccac 17186024  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    | ||||||| | |||||||||||||||||    
T  17186023 atatcaagtttattattggtgtgattttt 17185995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 27916691 - 27916921
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||| ||||||||||    | | ||||||||||||||| ||||||||| | || |||||||  |||||||||||||||   |||||    
T  27916691 tttgtaaagttactcatcgttatagtggaacggagggctgctctctcccccagactaggtcagtattggaccgaattgggtaaacaaatttcacatgttc 27916790  T
Q  106 tctttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    ||||||| | ||||||| || ||||||||||| ||||||||||||| | |  |||||  | || ||||||||||||||  |||| ||| | ||||||| |    
T  27916791 tctttttttctctctcgttgttttctacttttacttgtgtttataactgtcacccac--ttattttggttgcttgattgatttt-ctcaatacatcaaat 27916887  T
Q  204 attttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||  |||||||||| || ||||||||||    
T  27916888 attttatttatgtgatttttcaacgaattcacaa 27916921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 14183683 - 14183470
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||| ||||||||| |||| |||||||| ||||||||||||||        
T  14183683 tctcttttgtaaagttactcatcattatagtggaacggatggctgctctctcccccagactaggtcagttttggaccgaactgggtaaacaaattt---- 14183588  T
Q  101 tgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccaca 195  Q
           ||||    ||||||| ||||| || |||||||||||||||||||  |||||   ||| ||| | |||||||||||||||||  ||||| ||||    
T  14183587 -------ttttgtggtctctcgttgttttcttcttttgcttgtgtttataa--cttccatacactttgtt-ttggttgcttgattattacttgcttcaca 14183498  T
Q  196 catcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||||||||||||||    
T  14183497 catcaagtattttattggtgtgattttt 14183470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 18839777 - 18840006
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| ||||||||||||||||||| |  | | | ||||||| |||||||||||||||||| ||| |||||||| |||| ||||||   ||||    
T  18839777 tctcttttgtaaggttactcatcattatagtgaaacagagggctgctctttcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttc 18839875  T
Q  98 gtgtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctc 191  Q
    ||||  |||||| || | |||||||||| |||||| |||| |||||||||||||||| ||||   ||| ||| | | | || ||||||||||  ||||||    
T  18839876 gtgttctctcttcttttctctctcgctgttttctagttttggcttgtgtttataattgttccatacactttg-tttcgattacttgattattccttgctc 18839974  T
Q  192 cacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| | |||||||||||||||||    
T  18839975 cacacatcaagtttgttattggtgtgattttt 18840006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 27337026 - 27336800
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgtt 104  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||||||  |||||||| |||| |||||||| |  ||||||    
T  27337026 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgtt 27336929  T
Q  105 ctctttttcttt-ctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccac 194  Q
    |||| || |||| |||||||||||    |||||||||| ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   |||||||||    
T  27336928 ctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccac 27336829  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||| | |||||| ||||||||||    
T  27336828 acatcaagtttgttattgatgtgattttt 27336800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 2949322 - 2949081
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||| ||||||| |  | | | ||||||||||||||  |||||||||| ||| |||||||| |||| |||||||| |  |    
T  2949322 tctcttttgtaacgttactcatca-tatagtgaaacagagggctgctctctccccc-gactaggtcaa-tttggaccgaactgggtcaacaaattctttt 2949226  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||   ||| || || ||||||||||||||||   ||||||    
T  2949225 gtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacac-tttattttggttgcttgattatcccttgctc 2949127  T
Q  192 cacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||| | ||||||||||||||||| |  ||||||||||    
T  2949126 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 2949081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 13215275 - 13215516
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||| ||||||||||||||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| | || |||||| ||| |     
T  13215275 tctcttttgtaaatttactcatcattatagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgcgtcaacaaa-ttcttt 13215372  T
Q  101 tgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcc 192  Q
    |||||||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | ||||||| |||| |||   |||||||    
T  13215373 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgactatcccttgctcc 13215471  T
Q  193 acacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||| | ||||||||||| ||| | || ||||||||||    
T  13215472 acacatcaagtttattattggtgtgttttctcaacgaattcacaa 13215516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 9 - 222
Target Start/End: Complemental strand, 15669477 - 15669262
Alignment:
Q  9 gtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcg-tgtgttctc 107  Q
    |||||| |||||||||||||||||||    | | ||||||||||||| | ||||||||| |||||||| |||| | |||||||||||| | |||||||||    
T  15669477 gtaaagctactcatcattatagtggaacggatggctgctctctccccgagactaggtcagttttagactgaactgtgtaaacaaattttgttgtgttctc 15669378  T
Q  108 tttttc-tttctctcgctgt-ttctacttttgcttgtgtttataa-ttcttcccacgttgatattggttgcttgattatt-tttgctccacacatcaagt 203  Q
    | |||| ||||||||||||| || |||||||| |||||||||||| |||    ||| ||| | ||| ||||||||||||| |||||| |||||||||| |    
T  15669377 tctttcttttctctcgctgtgttatacttttgtttgtgtttataacttcgatacactttg-ttttgattgcttgattattatttgcttcacacatcaaat 15669279  T
Q  204 attttattggtgtgatttt 222  Q
    ||||||  |||||||||||    
T  15669278 atttta--ggtgtgatttt 15669262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31425106 - 31424878
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| ||||||||||||||||||| |    ||| ||||||||| |||||||||||||||| ||| |||||||| |||| ||||||   |||     
T  31425106 tctcttttgtaaggttactcatcattatagtgaaacggaaggctgctctct-ccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 31425009  T
Q  98 gtgtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctc 191  Q
    ||||  |||||| || | |||||||||| |||||||||||| ||||||||||||||| | ||   ||  ||| || ||||||||||| ||||  ||||||    
T  31425008 gtgttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgtcccatacattttgtta-tggttgcttgagtattccttgctc 31424910  T
Q  192 cacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| | |||||||||||||||||    
T  31424909 cacacatcaagtttgttattggtgtgattttt 31424878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 23816076 - 23816307
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| |||||||||||| ||| |||||   | |  ||||||||||||||||||||||||| ||| |||||||| |||| ||||||   |||     
T  23816076 tctcttttgtaacgttactcatcat-ataatggatcggagggatgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 23816173  T
Q  98 gtgtgttctctttttc-tttctctcgctg----tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-ttt 187  Q
    ||||  |||||||||| ||||||||||||    |||||||||||| |||||| |||||||| ||||   ||| ||| | |||||||||||||||||  ||    
T  23816174 gtgttctctctttttcttttctctcgctgttgttttctacttttgacttgtgattataattgttccatacactttg-ttttggttgcttgattattcctt 23816272  T
Q  188 gctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||    
T  23816273 gctccacacatcaagt-tgttattggtgtgattttt 23816307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 47906460 - 47906688
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||| ||||||| ||   | | ||||||||||||||| ||| |||||| ||| |||||||| |||| |||||||| |  |    
T  47906460 tctcttttgtaacgttactcatca-tatagtgaatcggagggctgctctctcccccagacttggtcaa-tttggaccgaactgggtcaacaaattctttt 47906557  T
Q  100 gtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
    ||||||||| ||  ||||||||||||    ||||||||||| ||||||| |||||||| ||||   ||| ||| | |||||||||||||||| | |||||    
T  47906558 gtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttggt-ttggttgcttgattatctcttgct 47906656  T
Q  191 ccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| | |||||||||||||||||    
T  47906657 ccacacatcaagt-tgttattggtgtgattttt 47906688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 14098019 - 14097831
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgc--tgttt-ctacttttg- 137  Q
    |||||||||||| || |||||||||||||  |||||||| |||| |||||||| |  |||||||||| || ||||||||| |  ||||| |||||||||     
T  14098019 ctgctctctcccacaaactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttcctttctctctcgttgttttctacttttga 14097921  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||| ||||   ||| ||||| |||||||||||||||| | ||||| |||||||||||| | ||||||||||| |||||    
T  14097920 cttgtgtttataattgttccatacactttgattttggttgcttgattatctcttgcttcacacatcaagtttgttattggtgtgtttttt 14097831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 50307637 - 50307405
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt--tcg 98  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  |||||||| |||| ||||||||  |      
T  50307637 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattctttt 50307540  T
Q  99 tgtgttctctttt-tctttctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttg 188  Q
    |||||||||| || | ||||||||||||||    |||||||||| ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   |||    
T  50307539 tgtgttctctcttatttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttg 50307440  T
Q  189 ctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||| ||||||||| | |||||||||||||||||    
T  50307439 ctccagacatcaagtttattattggtgtgattttt 50307405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 232
Target Start/End: Original strand, 15823736 - 15823977
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    ||||| |||||| |||||||||||| ||||||||  | | | ||||||||||||||| |||||||||| |||||||||||| |||| ||||||   |||     
T  15823736 tctctattgtaacgttactcatcat-atagtggaacagagggctgctctctcccccagactaggtcaa-tttagaccgaactgggtcaacaaattctttt 15823833  T
Q  98 gtgtgttctctttttctttctctcgctg----tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgatta-tttttg 188  Q
    ||||  |||||| || ||||||| | ||    |||||||||||| |||||| |||||||| ||||   ||| ||||| |||||||| ||||||    ||     
T  15823834 gtgttctctcttcttttttctcttgttgttgttttctacttttgccttgtgattataattgttccatacactttgattttggttgcctgattacccctta 15823933  T
Q  189 ctccacacatcaagtattttattggtgtgattttttaaggaatt 232  Q
    ||||||||||||||| | ||||||||||||||||| ||||||||    
T  15823934 ctccacacatcaagtttgttattggtgtgatttttaaaggaatt 15823977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 25128062 - 25128280
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||||||| || |    | | |||||||||| ||||||||||||||| ||  |||||||| |||| |||||||| |  |    
T  25128062 tctcttttgtaaggttactcatcattatattgaaacggagggctgctctctctcccatactaggtcaa-ttaggaccgaactgggtcaacaaattctttt 25128160  T
Q  100 gtgttctct----ttttctttctctcgctg-tttctacttttgcttgtgtttataatt-cttcccacgttgatattggttgcttgattatt-tttgctcc 192  Q
    |||||||||     |||||||||||||||| |||||||||||  ||||| |||||||| ||  |||| ||||| |||||||||||||||||  ||||||     
T  25128161 gtgttctctcttcctttctttctctcgctgttttctacttttatttgtgattataattgctatccactttgattttggttgcttgattattccttgctct 25128260  T
Q  193 acacatcaagtattttattg 212  Q
    ||||||||||| | ||||||    
T  25128261 acacatcaagtttgttattg 25128280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 43 - 217
Target Start/End: Complemental strand, 28207118 - 28206934
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctct-ttttctttctctcgctg----tttctactttt 136  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| || | ||||||||||||    |||||||||||    
T  28207118 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctactttt 28207020  T
Q  137 -gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtg 217  Q
     |||||||||||||||| ||||   ||| ||||| |||||||| |||||||   |||||||||||||||||| | |||||||||||    
T  28207019 ggcttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctccacacatcaagtttgttattggtgtg 28206934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 6115194 - 6114969
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||| |||||||||||||||||| |    ||  ||||||||||||||| |||||||||| ||| |||||||| ||||||||||||| |  |    
T  6115194 tctcttttgtaaaattactcatcattatagtgaaacggaatgctgctctctcccccagactaggtcaa-tttggaccgaactgggtaaacaaattatttt 6115096  T
Q  100 gtgttctctttttctttctctcgctgt-ttctacttttg-cttgtgtttataattcttcc-cac-gttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| ||  ||||||||| ||| ||||||||||| ||||| |||||||  |||||  ||  || || ||||||||||||||||   || ||||||    
T  6115095 gtgttctctcttcttttctctcgttgtcttctacttttgacttgtatttataa--cttccatacattttattttggttgcttgattatcactttctccac 6114998  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||||| |||  ||||||||||||    
T  6114997 acatcaagtatattaccggtgtgattttt 6114969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16429147 - 16429385
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||| | |    | | ||||||||||||||| |||||||||| ||| |||||||  |||| |||||||| |  |    
T  16429147 tctcttttgtaaggttactcatcattatagcgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaattgggtcaacaaattctttt 16429245  T
Q  100 gtgttctctttttctttctctcgctgtttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| ||  |||||||||||||||  |||||| | ||||||||||||  |||||   ||| ||| | |||||||| |||||||   |||||||||    
T  16429246 gtgttctctcttcttttctctcgctgttttcacttttggtttgtgtttataa--cttccatacactttg-ttttggttgcctgattatcacttgctccac 16429342  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| | ||||||||||||||||| |  ||||||||||    
T  16429343 acatcaagtttgttattggtgtgatttttcatcgaattcacaa 16429385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 240
Target Start/End: Complemental strand, 25251364 - 25251120
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgt 101  Q
    |||||||||| |||||| |||||||||||| |  | | |  |||||||||||| |||||||||||||||  |||||||| |||| |||||||| |  |||    
T  25251364 tcttttgtaaggttacttatcattatagtgaaacagagggttgctctctccccaatactaggtcaatttg-gaccgaactgggtcaacaaattcttttgt 25251266  T
Q  102 gttctctttttctttctctcgc--tgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||| || ||||||||| |  ||||| ||||||||| |||||| |||||||| || |   ||| ||| | |||||||||||| |||   ||||||||    
T  25251265 gttctctcttcctttctctctcgttgttttctacttttggcttgtgattataattgtttcatacactttgtt-ttggttgcttgactatcccttgctcca 25251167  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaataa 240  Q
    |||||||||| | ||||||||||||||||| |  |||||||||||||    
T  25251166 cacatcaagtttgttattggtgtgatttttcatcgaattcacaataa 25251120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 77 - 212
Target Start/End: Complemental strand, 26332526 - 26332391
Alignment:
Q  77 cgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttg 174  Q
    ||||| ||||||||||||||||||||| |||| | | |||||| || || |||||||||||| |||||||||||| | |  |||| |||| | ||| |||    
T  26332526 cgaactgggtaaacaaatttcgtgtgtcctctctctttttctcccgttgttttctacttttgtttgtgtttataactatcacccatgttg-ttttgattg 26332428  T
Q  175 cttgattatttttgctccacacatcaagtattttattg 212  Q
    |||||||| |||||||||||||||||||||||||||||    
T  26332427 cttgatta-ttttgctccacacatcaagtattttattg 26332391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 44 - 149
Target Start/End: Complemental strand, 26520169 - 26520061
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttc-tttctctcgctg-tttctactttt-gctt 140  Q
    |||||| ||||||| | ||||||| |||| |||| ||| |||||||||||| ||||||||||||| |||| |||||||||||| ||||||||||| ||||    
T  26520169 tgctctttcccccaaattaggtcagttttggaccaaactgggtaaacaaatatcgtgtgttctctctttcttttctctcgctgttttctacttttagctt 26520070  T
Q  141 gtgtttata 149  Q
    |||||||||    
T  26520069 gtgtttata 26520061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 39462750 - 39462940
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttt-tctttctctcgctgtt----tctactttt 136  Q
    ||||||||||||||| |||||||||||||  |||||||| |||| |||||||| |  |||||||||| || | ||||||||||||||    |||| ||||    
T  39462750 ctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctaatttt 39462848  T
Q  137 g-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    | ||||||||||||||| ||||   ||| ||||| ||| |||| |||||||   |||||||||||||||||| | |||||||||||||||||    
T  39462849 ggcttgtgtttataattgttccatacactttgattttgattgcctgattatcccttgctccacacatcaagtttgttattggtgtgattttt 39462940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4131467 - 4131237
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||| |||||||||| ||| ||| ||||   || |||||||| |  |    
T  4131467 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccagactaggtcaa-tttggactgaactatgtcaacaaattctttt 4131369  T
Q  100 gtgttctc--tttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||  || || | ||||||| || |||||| |||| |||||||||||||||| ||||   ||| ||| | |||||||||||||||| | ||||||    
T  4131368 gtgttctctgttcttttctctctcgttgttttctatttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatctcttgctc 4131270  T
Q  192 cacacatcaagtattttattggtgtgatttttt 224  Q
    | |||||||||| | |||||||||||| |||||    
T  4131269 cgcacatcaagtttgttattggtgtgagttttt 4131237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 6 - 223
Target Start/End: Complemental strand, 27339217 - 27338991
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgtt 104  Q
    ||||||| |||||||||||| |||||||||   | | ||| ||||||||||| |||||||||||||  ||||||||  ||| |||||||| |  ||||||    
T  27339217 tttgtaacgttactcatcat-atagtggatcggagggctgatctctcccccagactaggtcaatttg-gaccgaactaggtcaacaaattcttttgtgtt 27339120  T
Q  105 ctctttttcttt-ctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccac 194  Q
    |||| || |||| |||||||||||    |||||||||| ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   ||| |||||    
T  27339119 ctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgttccac 27339020  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||| | |||||| ||||||||||    
T  27339019 acatcaagtttgttattgatgtgattttt 27338991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 6756716 - 6756875
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctct-cccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcg 98  Q
    |||||||||||||||||||||||||||||||| |    ||||||||||||| |||||| |||||||| | ||| |||||||| || | |||||||| |      
T  6756716 tctcttttgtaaagttactcatcattatagtgaaacggaagactgctctctccccccagactaggtc-agtttggaccgaactggatcaacaaattcttt 6756814  T
Q  99 tgtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc 157  Q
    | |||||||| ||  || ||||||||| |||||||||||| ||||||||||||||| ||||    
T  6756815 tctgttctctcttctttcctctcgctgttttctacttttgacttgtgtttataattgttcc 6756875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 12302596 - 12302366
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt---tc 97  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| | |||||||||||  |||||||| |||| ||||||||   |     
T  12302596 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagattaggtcaatttg-gaccgaactgggtcaacaaattctttt 12302499  T
Q  98 gtgtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||  |||||| || | ||||||| ||||| ||||||||| ||||||||||||||| ||||   ||| ||||| |||||| | |||||||   ||||||    
T  12302498 gtgttctctcttcttttctctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggtttcctgattatcacttgctc 12302399  T
Q  192 cacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| | ||||||||||| ||||||    
T  12302398 cacacatcaagtttgttattggtgtgttttttt 12302366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 50076763 - 50076605
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | ||||||||||| ||||| |||| ||||| ||| |||||||| |||| |||||||| |  |    
T  50076763 tctcttttgtaaagttactcatcattatagtggaacggatgactgctctct-ccccagactatgtcaa-tttggaccgaactgggtcaacaaattctttt 50076666  T
Q  100 gtgttctct-ttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||||||| || | ||||||||| || |||||||||||  ||||||||||||||| ||||    
T  50076665 gtgttctctcttctttttctctcgttgttttctacttttaacttgtgtttataattgttcc 50076605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 222
Target Start/End: Complemental strand, 50078774 - 50078653
Alignment:
Q  106 tctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatc 199  Q
    ||||||||| ||||||| ||||| ||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||||||||  ||||||||||||||    
T  50078774 tctttttctctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattattccttgctccacacatc 50078676  T
Q  200 aagtattttattggtgtgatttt 222  Q
    |||| | ||||||||||||||||    
T  50078675 aagtttgttattggtgtgatttt 50078653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 18307299 - 18307516
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |    | | ||||||||| ||||| |||||||||| ||| |||||||| | || |||||||| |  |    
T  18307299 tctcttttgtaaagttactcatcattatagtgaaacggatggctgctctct-ccccagactaggtcaa-tttggaccgaacggagtcaacaaattctttt 18307396  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | |||||||| | |||||  |||||||    
T  18307397 gtgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcctaattatcatttgctc 18307495  T
Q  192 cacacatcaagtattttattg 212  Q
    |||||||||||| | ||||||    
T  18307496 cacacatcaagtttgttattg 18307516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 40134134 - 40134376
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |    | | ||||||||||||||| |||||||||| ||| ||||| ||  |||||||||||| |  |    
T  40134134 tctcttttgtaaagttactcatcattatagtgaaacggatggctgctctctcccccaaactaggtcaa-tttggaccggactaggtaaacaaattctttt 40134232  T
Q  100 gtgttctct-ttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt---ttgct 190  Q
    ||||||||| || | ||||||||| || ||||||||||| ||||| | ||||||  |||||   ||| ||| | |||||||| ||||||| |   |||||    
T  40134233 gtgttctctattctttttctctcgttgttttctacttttggcttgagattataa--cttccatacactttg-ttttggttgcctgattatatcacttgct 40134329  T
Q  191 ccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||| | |||||| |||||||||| |  ||||||||||    
T  40134330 ccacacatcaagtttgttattgatgtgatttttcatcgaattcacaa 40134376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 50078912 - 50078842
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||| ||||||||||||||||  | | | ||||||||||||||| |||||||||||||    
T  50078912 tctcttttgtaaagttattcatcattatagtggaacagatggctgctctctcccccagactaggtcaattt 50078842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 21353434 - 21353345
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||  |||||||||||||||||||   |   ||||||||||||||| |||||||||  |||||||||||| |||||||||||||    
T  21353434 tttgtaaagaaactcatcattatagtggatcggagagctgctctctcccccagactaggtcatctttagaccgaactgggtaaacaaatt 21353345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 10116038 - 10116184
Alignment:
Q  74 gaccgaacagggtaaacaaattt-cgtgtgttctctttttctttctctcgctgtttcta-cttttgcttgtgtttataattcttcccacgttgatattgg 171  Q
    ||||||||  ||||||||||||| ||||| |||||| |||||  || | |||||| ||| ||||||||| ||||||||| | | | ||||||| | ||||    
T  10116038 gaccgaacttggtaaacaaattttcgtgtcttctctctttct--cttttgctgtt-ctatcttttgcttatgtttataactgtccacacgttgtt-ttgg 10116133  T
Q  172 ttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||  ||||||| ||| ||||||||||||||||||||||||||||||||||||    
T  10116134 ttatttgattaattt-gctccacacatcaagtattttattggtgtgattttt 10116184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 11457566 - 11457338
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    ||||||||||||||||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| ||||||||  ||| ||||||   |||     
T  11457566 tctcttttgtaaagttactcatcat-atagtgaaacggatgtctgctctctcccccagactaggtcaa-tttggaccgaacttggtcaacaaattctttt 11457469  T
Q  98 gtgtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||  |||||| || | |||||||||| ||||||||||| ||||||||||| |||| ||||    || ||| | |||||||| |||||||   |||||     
T  11457468 gtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttaaaattgttccatatactttg-ttttggttgcctgattatcacttgctt 11457370  T
Q  192 cacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| | |||||||||||||||||    
T  11457369 cacacatcaagtttgttattggtgtgattttt 11457338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10399919 - 10399827
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  10399919 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 10399827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 51750229 - 51750321
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  51750229 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 51750321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 133 - 237
Target Start/End: Complemental strand, 13785212 - 13785109
Alignment:
Q  133 ttttgcttgtgtttataattcttc-ccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaat 231  Q
    |||||||||||||||||||| |   |||| ||||||||  ||||||| ||| ||| ||| |||||||||||| ||||||||||||||||||||||  |||    
T  13785212 ttttgcttgtgtttataattgtcatccacattgatattatttgcttggttaattt-gcttcacacatcaagt-ttttattggtgtgattttttaacaaat 13785115  T
Q  232 tcacaa 237  Q
    ||||||    
T  13785114 tcacaa 13785109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 175 - 223
Target Start/End: Original strand, 156049 - 156096
Alignment:
Q  175 cttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||| |||| |||||||||||||||||||||||||||||||||||    
T  156049 cttgattactttt-ctccacacatcaagtattttattggtgtgattttt 156096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 16428843 - 16428994
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||| ||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| | || |||||||| |  |    
T  16428843 tctcttttgtaaggttactcatcattttagtgaaacggagggctgctctctcccccaaactaggtcaa-tttggaccgaactgagtcaacaaattctttt 16428941  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataa 150  Q
    ||||||||| ||  ||||||||| || ||||||||||| | ||||||||||||    
T  16428942 gtgttctctcttcttttctctcgatgttttctacttttggtttgtgtttataa 16428994  T

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Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 2232723 - 2232786
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  2232723 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 2232786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 9521848 - 9521911
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||||||||||||    ||||||||||| |||||||||||| || ||||||||    
T  9521848 ctgctctctcccccatactaggtcgtcattagaccgaactgggtaaacaaatatcttgtgttct 9521911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 9526599 - 9526662
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  9526599 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 9526662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6823204 - 6823296
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  6823204 tctcttttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 6823296  T

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Target: chr1; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 15294925 - 15294833
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| ||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  15294925 tctcttttgtaacgttactcatcat-atagtgaatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 15294833  T

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Target: chr1; HSP #59
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24325853 - 24325945
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| ||   | | ||||||||||||||| |||| ||||||||| |||||||| |||| ||||||||    
T  24325853 tctcttttgtaatgttactcatcat-atagtgaatcgaatggctgctctctcccccagactaagtcaatttt-gaccgaactgggtcaacaaatt 24325945  T

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Target: chr1; HSP #60
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 31735612 - 31735520
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  31735612 tctcttttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 31735520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 39932442 - 39932512
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  39932442 ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 39932512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47451832 - 47451901
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| |||||||||||| |||||| |    | |||||||||||||||||||||||||||||||    
T  47451832 tctcttttgtaacgttactcatcat-atagtgaaacgaatgactgctctctcccccatactaggtcaattt 47451901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 13433455 - 13433566
Alignment:
Q  112 tctttctctcgctgt-ttcta-cttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtatttt 208  Q
    ||||||||||||||| ||||  ||||||||||| ||||||| | |  ||||||||| | ||||||||||||||| ||| |||||||| || |||||||||    
T  13433455 tctttctctcgctgtgttctgtcttttgcttgtatttataactgtcacccacgttgtt-ttggttgcttgattaattt-gctccacagattaagtatttt 13433552  T
Q  209 attggtgtgatttt 222  Q
    ||||||||| ||||    
T  13433553 attggtgtggtttt 13433566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 28840874 - 28840961
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  28840874 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 28840961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 43104351 - 43104384
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  43104351 tctcttttgtaaagttactcatcattatagtgga 43104384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 16226530 - 16226605
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  16226530 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 16226605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 16231925 - 16232000
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  16231925 ttgattttggttgcttgattatccgttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 16232000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 26519358 - 26519305
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||  ||||||||||||  |||||||||||||||||||||||    
T  26519358 ttggttgcttgattattacttgctccacaca--aagtattttattggtgtgatttt 26519305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 31490274 - 31490329
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||| || ||||||||||||||||    
T  31490274 ttggttgcttgattatctcttgctccacacatcaagt-ttgtattggtgtgattttt 31490329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 8213615 - 8213584
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||    
T  8213615 tcttttgtaaagttactcatcattatagtgga 8213584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 10399747 - 10399685
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    ||||| |||||||||||||||| | |||||||||||||||||| | ||||||||||||| ||||    
T  10399747 ttgattttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatatttt 10399685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 13447187 - 13447133
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  13447187 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 13447133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 15294748 - 15294694
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  15294748 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 15294694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 49495302 - 49495271
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtg 32  Q
    ||||||||||||||||||||||||||||||||    
T  49495302 tctcttttgtaaagttactcatcattatagtg 49495271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 2510416 - 2510324
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||| ||||||||||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  2510416 tctctcttgtaaagttactcatcat-atagtgaaacggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 2510324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 2617706 - 2617775
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| ||||||||||| ||||||||||   | | |||||||||||| || |||||||||||||    
T  2617706 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctccctcagactaggtcaattt 2617775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 9459348 - 9459279
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  9459348 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 9459279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 9463175 - 9463106
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  9463175 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 9463106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 17324727 - 17324635
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  17324727 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 17324635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 217
Target Start/End: Complemental strand, 28998299 - 28998116
Alignment:
Q  47 tctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctct-ttttc----tttctctcgctg-tttctactttt-gc 138  Q
    ||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| |||||    ||||||||| || ||||||||||| ||    
T  28998299 tctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggc 28998201  T
Q  139 ttgtgtttataattcttcc---cacgttgat--attggttgcttgattat-ttttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||| ||||   ||| |||||   |||||||| |||||||   |||||||||||||||||| | | |||||||||    
T  28998200 ttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtg 28998116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 47 - 217
Target Start/End: Complemental strand, 29004015 - 29003832
Alignment:
Q  47 tctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctct-ttttc----tttctctcgctg-tttctactttt-gc 138  Q
    ||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| |||||    ||||||||| || ||||||||||| ||    
T  29004015 tctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttttcttcttttctctcgttgttttctacttttggc 29003917  T
Q  139 ttgtgtttataattcttcc---cacgttgat--attggttgcttgattat-ttttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||| ||||   ||| |||||   |||||||| |||||||   |||||||||||||||||| | | |||||||||    
T  29003916 ttgtgtttataattgttccatacactttgattctttggttgcctgattatcacttgctccacacatcaagtttgtcattggtgtg 29003832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 95
Target Start/End: Complemental strand, 2401267 - 2401218
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  2401267 ctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 2401218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 6995593 - 6995556
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||| | |||||||||||||||||    
T  6995593 ttgctccacacatcaagtttgttattggtgtgattttt 6995556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 20291818 - 20291878
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| |||||| ||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  20291818 ttgattttggttacttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 20291878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 95
Target Start/End: Original strand, 51752577 - 51752645
Alignment:
Q  26 tatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  51752577 tatagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 51752645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 155901 - 155929
Alignment:
Q  6 tttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||||||||||||||||    
T  155901 tttgtaaagttactcatcattatagtgga 155929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 4144732 - 4144680
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| | |||||||   ||||||||||| |||||||||||||    
T  4144732 ctgctctctcccccagagtaggtcatcattagaccgaactgggtaaacaaatt 4144680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 161 - 237
Target Start/End: Complemental strand, 11693245 - 11693172
Alignment:
Q  161 gttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| ||||||||||| |||  |||| ||||| || ||||||||||||||||| |||||| ||||||||||    
T  11693245 gttgatattgattgcttgattaattta-ctccgcacat-aactattttattggtgtgat-ttttaacgaattcacaa 11693172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 13358804 - 13358855
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  13358804 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 13358855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 17324253 - 17324371
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| |||| |||||||||||||| |    ||| ||| |||||||||   |||||||||| ||| ||||||||  ||| |||||| ||| ||    
T  17324253 tctcttttgtaaggttattcatcattatagtgaaacggaaggctggtctctccccatgactaggtcaa-tttggaccgaactaggtcaacaaa-ttcttg 17324350  T
Q  101 tgttctctttttctttctctc 121  Q
    |||||||| || |||||||||    
T  17324351 tgttctctcttcctttctctc 17324371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 46431619 - 46431564
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||| ||||||||| | |||||||||||||||||    
T  46431619 ttggttgcttgattatctcttgctccaaacatcaagt-tgttattggtgtgattttt 46431564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 47177724 - 47177799
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| |||||||||| |||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  47177724 ttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttgatcgaattcacaa 47177799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 51750406 - 51750461
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  51750406 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 51750461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 124; Significance: 2e-63; HSPs: 62)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 31035368 - 31035600
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatacta--ggtcaattttagaccgaacagggtaaacaaatttcgtgtgt 103  Q
    |||||||||||||||||||||||||||||    | | ||||||||||||||| ||||  ||||| | || |||||||| |||||||||||||||||||||    
T  31035368 tttgtaaagttactcatcattatagtggaacggagggctgctctctcccccagactataggtcagtattggaccgaactgggtaaacaaatttcgtgtgt 31035467  T
Q  104 tctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaag 202  Q
    ||||| |||||||||||||||| |||||| |||||||||||||| ||||| |||||||||||||||||||||||||| ||  ||| ||||||||||||||    
T  31035468 tctctctttctttctctcgctgttttctagttttgcttgtgtttttaattgttcccacgttgatattggttgcttgacta-atttcctccacacatcaag 31035566  T
Q  203 tattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||| ||||||| ||||||||||    
T  31035567 tattttattggtgtga-tttttaacgaattcacaa 31035600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 48 - 223
Target Start/End: Complemental strand, 31566601 - 31566425
Alignment:
Q  48 ctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttgcttgtgttt 146  Q
    |||||||||||||||||||| | || |||||||| |||||||||||||||||| ||||||| |||||||||||||||| ||||||||| |||||||||||    
T  31566601 ctctcccccatactaggtcagtattggaccgaactgggtaaacaaatttcgtgagttctctctttctttctctcgctgttttctacttctgcttgtgttt 31566502  T
Q  147 ataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||| || ||||| |||||||| |||| ||||||| |||||||||| | |||||||||||||||||||||||||||    
T  31566501 ataattgttacccacattgatattagttgtttgatta-ttttgctccatagatcaagtattttattggtgtgattttt 31566425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 31578367 - 31578148
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    |  |||||||||||||| | ||||||||| | |  |||||||| |||||||||||||| |||    
T  31578367 tctcttttgtaaagttactcatcattatagtggaacggagaactgctctctcccctagactaggtcagtataggaccgaactgggtaaacaaattttgtg 31578268  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    || ||||    ||||||||||| || ||||||||||||||||||||||||||| || ||||  ||||||||||||||||||||| ||||||| |||||||    
T  31578267 tgctctc----tctttctctcgttgttttctacttttgcttgtgtttataattgttgcccatattgatattggttgcttgatta-ttttgctacacacat 31578173  T
Q  199 caagtattttattggtgtgattttt 223  Q
    ||||||||||||| |||||||||||    
T  31578172 caagtattttattcgtgtgattttt 31578148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16833795 - 16834022
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||| ||||||||||||    ||| |||||||||||| || |||| |||| |||| ||| |||| ||||||||||| ||||||    
T  16833795 tctcttttgtaaagttactcaacattatagtggaacgaaaggctgctctctcccacagactaagtcacttttggac-gaactgggtaaacaaaattcgtg 16833893  T
Q  101 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttat---aattcttcccacgttgatattggttgcttgattatttttgctccacaca 197  Q
    |||||||| | |||||          ||||||||||||||||||||||   |||| ||||||| |||| |||||||||||||||||||| | | ||||||    
T  16833894 tgttctctctctcttt----------ttctacttttgcttgtgtttattataattgttcccacattgacattggttgcttgattatttt-gtttcacaca 16833982  T
Q  198 tcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||||||| |||| || ||||||||||    
T  16833983 tcaagtattttattggtgtgacttttcaacgaattcacaa 16834022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 31162455 - 31162683
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctccccc--atactaggtcaattttagaccgaacagggtaaacaaatttcg 98  Q
    ||||||||||||| ||||||||||||||||||||  | | | ||||||||||||||  | ||||||||| | || |||||||| ||||||||||||||||    
T  31162455 tctcttttgtaaaattactcatcattatagtggaacagagggctgctctctcccccccagactaggtcagtattggaccgaactgggtaaacaaatttcg 31162554  T
Q  99 tgtgttctcttttt--ctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgct 190  Q
    ||||||||||||||   ||||||||| || ||||||||||| |||||| |||||||  |||||   ||| ||| | |||||| ||| ||||||  |||||    
T  31162555 tgtgttctcttttttcttttctctcgttgttttctacttttggcttgtatttataa--cttccatacactttg-ttttggttacttaattattacttgct 31162651  T
Q  191 ccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||||||||||||    
T  31162652 ccacacatcaagtattttattggtgtgatttt 31162683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 13858574 - 13858350
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| |  | | | ||||||||||||||| |||||||||| ||| ||| |||| |||||||||||||   ||    
T  13858574 tctcttttgtaaagttactcatcattatagtgaaacagagggctgctctctcccccagactaggtcaa-tttggacagaactgggtaaacaaattctttg 13858476  T
Q  101 tgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
    |||||||  |||||||||||| ||| ||||||||||| ||||||||||||||  |||||   ||| ||| | ||||||||||||||||   |||||||||    
T  13858475 tgttctccctttctttctctcactgttttctacttttggcttgtgtttataa--cttccatacactttg-ttttggttgcttgattatcacttgctccac 13858379  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||| | |||||||||||||||||    
T  13858378 acatcaagtttcttattggtgtgattttt 13858350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 21 - 237
Target Start/End: Original strand, 17847784 - 17848000
Alignment:
Q  21 atcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt-cgtgtgttctctttttctttctc 119  Q
    |||||||||||||| |  | | ||||||||||||||| ||||||||| | || |||| ||| ||| |||| ||||| | |||||||||| ||| ||||||    
T  17847784 atcattatagtggaatggagggctgctctctcccccagactaggtcagtattggaccaaactgggaaaactaattttcatgtgttctctctttatttctc 17847883  T
Q  120 tcgctgtttctacttttgcttgtgtttataattcttccc-acgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtga 218  Q
    ||  | |||||||| |||||||||||||||||| |  || || ||| | |||||||||| |||| ||||  |||||||||||||||||||||||||||||    
T  17847884 tcattttttctactcttgcttgtgtttataattgtcacctacattgtt-ttggttgcttaattaattttt-tccacacatcaagtattttattggtgtga 17847981  T
Q  219 ttttttaaggaattcacaa 237  Q
    |||||||| ||||||||||    
T  17847982 ttttttaacgaattcacaa 17848000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 21482556 - 21482796
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||  | |    | | ||||||||||||||| |||||||||||||  |||||||| ||||||||||||||||||    
T  21482556 tctcttttgtaaagttactcatcattataaagaaacggagggctgctctctcccccaaactaggtcaatttg-gaccgaactgggtaaacaaatttcgtg 21482654  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgtt-gatattggttgcttgattat-ttttgctcca 193  Q
    |||||||| |||| |||||||||||| |||||||||||| ||||| ||||||  |||||   ||| ||   | |||||||||| |||||   ||||||||    
T  21482655 tgttctctctttcttttctctcgctgttttctacttttgtttgtgattataa--cttccatacactttattttttggttgcttcattatcacttgctcca 21482752  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | ||||||||||||||||| |  ||||||||||    
T  21482753 cacatcaagtttattattggtgtgatttttcatcgaattcacaa 21482796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 3005721 - 3005502
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||| |||||||||||||||||    | |  |||||||||||||| || |||||| |||| |||||||| ||||||||||||| | ||    
T  3005721 tctcttttgtaaagttgctcatcattatagtggaacggaggggtgctctctcccccagaccaggtcagttttggaccgaactgggtaaacaaatt-cttg 3005623  T
Q  101 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacac 196  Q
    |||||||  |||||| |||||| ||||| ||| ||| ||||| |||||||  |||||   ||| ||| |  |||||| |||||||||  |||||||||||    
T  3005622 tgttctccctttctt-ctctcgttgtttgtaccttttcttgtatttataa--cttccatacactttgtt--tggttgtttgattattacttgctccacac 3005528  T
Q  197 atcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||||||    
T  3005527 atcaagtattttattggtgtgatttt 3005502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 2468219 - 2467995
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| | || | | |||||||||| |||| | |||||||| ||| ||| ||||  |||||||||||||||||    
T  2468219 tctcttttgtaaagttactcatcattatagtgaaatagagggctgctctctctcccagattaggtcaa-tttggacagaactaggtaaacaaatttcgtg 2468121  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    |||||||| |||| ||||||||| || |||||| |||||  ||||| ||||||  |||||   ||| ||| | |||||||||||| |||   ||||||||    
T  2468120 tgttctctctttcttttctctcgttgttttctaattttgttttgtgattataa--cttccctacactttg-ttttggttgcttgactatcacttgctcca 2468024  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    |||||||||| | ||||||||||||||||    
T  2468023 cacatcaagtttattattggtgtgatttt 2467995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 21480748 - 21480898
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| |  | | | ||||||||||||||| |||||||||| ||| || ||||| ||||||| ||| ||||||    
T  21480748 tctcttttgtaaagttactcatcattatagtgaaacagagggctgctctctcccccagactaggtcaa-tttggaacgaactgggtaaaaaaaattcgtg 21480846  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    |||||||| |||| ||||||||| || ||||| |||||| ||||| ||||||    
T  21480847 tgttctctctttcttttctctcgttgttttcttcttttgtttgtgattataa 21480898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 6 - 121
Target Start/End: Original strand, 6376239 - 6376354
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||  | ||| |||||||||||| || ||||||||| | || ||||||||   |||||||||||| ||||||||    
T  6376239 tttgtaaagttactcatcattatagtggaacagaaggctgctctctccctcagactaggtcagtattggaccgaacttagtaaacaaattttgtgtgttc 6376338  T
Q  106 tctttttctttctctc 121  Q
    ||| | ||||||||||    
T  6376339 tctctctctttctctc 6376354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 28251656 - 28251426
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | |||||||||||||||||||||||||| ||| |||||||| |||| |||||||| |  |    
T  28251656 tctcttttgtaatgttactcatcat-atagtggatcggagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 28251559  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactt-ttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||| | ||||||| |||||||| ||||   ||| ||| | |||||||| ||||||||  ||||    
T  28251558 gtgttctctcttctttttctctcgctgttgttttctacttgtggcttgtgattataattgttccatacactttg-ttttggttgcctgattattccttgc 28251460  T
Q  190 tccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||| | ||||||||||||||||||    
T  28251459 tccacacatcaagt-tgttattggtgtgatttttt 28251426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 36865781 - 36866012
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccat-actaggtcaattttagaccgaacagggtaaacaaatt-tcg 98  Q
    |||||||||||||||||||||||||||||||| |    ||  |||||||||||||||  |||||||||||||  |||||||| ||||||||||||| ||     
T  36865781 tctcttttgtaaagttactcatcattatagtgaaacggaatgctgctctctcccccaagactaggtcaatttg-gaccgaactgggtaaacaaattctct 36865879  T
Q  99 tgtgt----tctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttg 188  Q
    |||||    ||| ||||||||||||||| || ||||||||||| |||| ||||||||||| ||||   ||| ||| | ||||||||||||||||   |||    
T  36865880 tgtgttctgtctttttttctttctctcgttgttttctacttttggcttttgtttataattgttccatacactttg-ttttggttgcttgattatcacttg 36865978  T
Q  189 ctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| | |||||| |||| ||||    
T  36865979 ctccacacatcaagtttgttattgatgtggtttt 36866012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 15072957 - 15073186
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| | ||||||    | | ||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |  |    
T  15072957 tctcttttgtaacgttactcatcat-acagtggaacggagggctgctctctcccccagactaggtcaa-tttagaccgaactgggtcaacaaattatttt 15073054  T
Q  100 gtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
    ||||||||| ||  ||||||||||||    ||||||||||| |||||||||||||||| ||||   ||| ||| | ||| |||||||| |||   |||||    
T  15073055 gtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttgattgcttgactatcccttgct 15073153  T
Q  191 ccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| | |||||||||||||||||    
T  15073154 ccacacatcaagtttgttattggtgtgattttt 15073186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 14419278 - 14419120
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttcgt 99  Q
    |||||||||| ||||||||||||||||||| |  | | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||   ||| ||    
T  14419278 tcttttgtaaggttactcatcattatagtgaaacagatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgt 14419180  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc 157  Q
    ||  |||||| || | |||||||||| |||||||||||| ||||||||||||||| ||||    
T  14419179 gttctctcttcttttctctctcgctgttttctacttttgacttgtgtttataattgttcc 14419120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 25952766 - 25952988
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||| ||||||||||||||||||||    | | ||||||||||||||| ||||||| || ||| ||||||||  ||| |||||||| |  |    
T  25952766 tctcttttgtaaaattactcatcattatagtggaacggagggctgctctctcccccagactaggt-aaatttggaccgaactaggtcaacaaattctttt 25952864  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctactttt-gcttgtgtttataatt-cttcccac-gttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| |||| |||||||||| | ||||||||||| | |||||||||||||| ||||  ||  || || ||||||||||||||||   || |||||    
T  25952865 gtgttctctctttcttttctctcgccgttttctacttttggattgtgtttataattgcttcatacactttattttggttgcttgattatcactttctcca 25952964  T
Q  194 cacatcaagtattttattggtgtg 217  Q
    |||||||||| | |||||||||||    
T  25952965 cacatcaagtttgttattggtgtg 25952988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 3896068 - 3896186
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||| ||| ||    | | ||||||||||||||||| ||| ||| | || || ||||  | ||||||||||||||||    
T  3896068 tctcttttgtaaagttactcatcattaaagtagaacggatggctgctctctcccccatagtagatcagtattggatcgaattgagtaaacaaatttcgtg 3896167  T
Q  101 tgttctctttttctttctc 119  Q
    |||||||| ||||||||||    
T  3896168 tgttctctatttctttctc 3896186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 33541499 - 33541257
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt- 99  Q
    |||||||||||| |||||||||||| |||||| |    ||| ||||||||||||||| |||||||||||||  |||||||  |||| || ||||||| |     
T  33541499 tctcttttgtaaggttactcatcat-atagtgaaacggaaggctgctctctcccccagactaggtcaatttg-gaccgaattgggtcaa-aaatttcttt 33541403  T
Q  100 -gtgttctctttttctttctctc--gctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
     ||||||||| || |||||||||  |||| |||||||||||| ||||||||||||||| ||||   ||| || || ||| ||||||||||||   || ||    
T  33541402 tgtgttctctcttcctttctctctcgctgatttctacttttggcttgtgtttataattgttccatacac-tttattttgattgcttgattatcccttact 33541304  T
Q  191 ccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  33541303 ccacacatcaagtttgttattggtgtgatttttgatcgaattcacaa 33541257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 138 - 222
Target Start/End: Original strand, 6376433 - 6376517
Alignment:
Q  138 cttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| || |||| |||||||||| |||||| |||||||| |||||||| ||||||||||||||||||| ||||||    
T  6376433 cttgtgtttataattgttacccatgttgatattgattgcttaattatttt-gctccacaaatcaagtattttattggtgcgatttt 6376517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 14808051 - 14808236
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt---tcgtgtgttctctttttctttctctcgctgttt-ctacttttg-ctt 140  Q
    |||||||||||| |||||||||||||  |||||||| |||| ||||||||   | ||||  |||||| || | ||||||| ||||| ||||||||| |||    
T  14808051 ctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttcttttctctctcgttgttttctacttttggctt 14808149  T
Q  141 gtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| || |   ||| ||| | ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||||    
T  14808150 gtgtttataattgtttcatacactttgtt-ttggttgcttgattatccgttgctccacacatcaagtttgttattggtgtgatttttt 14808236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 45 - 220
Target Start/End: Original strand, 1225456 - 1225626
Alignment:
Q  45 gctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctacttttg-cttg 141  Q
    |||||||||| ||||||||||||| ||| ||||||||  ||| |||||||| |  |||||||||| ||  |||||||||||| |||||||||||| ||||    
T  1225456 gctctctccctcatactaggtcaa-tttggaccgaactaggtcaacaaattcttttgtgttctctcttcttttctctcgctgttttctacttttgacttg 1225554  T
Q  142 tgtttataattcttcccacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgatt 220  Q
    |||||||||||        |||  | |||||||||||||||||  ||| |||||||||||||||| ||||||| ||||||    
T  1225555 tgtttataatt--------gtttgttttggttgcttgattattccttgttccacacatcaagtatgttattggcgtgatt 1225626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 30480592 - 30480365
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| |||| ||||||| |||||| | |  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||   |||     
T  30480592 tctcttttgtaacgttagtcatcat-atagtgaaatggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 30480495  T
Q  98 gtgtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctc 191  Q
    ||||  |||||| || | |||||||||| ||||||||||| |||||| ||||||||| ||||   ||| ||| | |||||||||||||||||  || |||    
T  30480494 gtgttctctcttcttttctctctcgctgttttctacttttggcttgtatttataattgttccatacactttg-ttttggttgcttgattattccttactc 30480396  T
Q  192 cacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||| | | |||||||||| |||||    
T  30480395 cacacatcaaatttgttattggtgtcatttt 30480365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 41382908 - 41383138
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |  | | | ||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||| |  |    
T  41382908 tctcttttgtaacgttactcatcat-atagtgaaacagagggctgctctctcccccagactaggtcaa-tttggaccgaactaggtcaacaaattctttt 41383005  T
Q  100 gtgttctctttttc-tttctctcgctg----tttctactt-ttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||| | |||||||||||||||| ||||    || ||| | ||| |||||||||||| | ||||    
T  41383006 gtgttctctcttccttttctctcgctgttgttttctacttctggcttgtgtttataattgttccataaactttg-ttttgattgcttgattatctcttgc 41383104  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||| | ||||||||||| |||||    
T  41383105 tccacacatcaagtttgttattggtgtggttttt 41383138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 15185804 - 15185566
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||| ||| ||||||||||||||||||| |    | ||||| ||||||||| | |||||||||||||  |||||||| |||| |||||||| |  |    
T  15185804 tctcttttttaaggttactcatcattatagtgaaacggaggactgttctctcccctagactaggtcaatttg-gaccgaactgggtcaacaaattctttt 15185706  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
     |||||||| ||||||||||||| || |||||||||||| || || ||||||  |||||   ||| ||| | |||||||||||| |||   || ||||||    
T  15185705 ttgttctctctttctttctctcgttgttttctacttttgtttatgattataa--cttccatacactttg-ttttggttgcttgactatcccttactccac 15185609  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| | |||||| |||||||||| |  ||||||||||    
T  15185608 acatcaagtttgttattgatgtgatttttcaccgaattcacaa 15185566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3874256 - 3874348
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  3874256 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 3874348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 15809464 - 15809556
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||| | | | ||||||||| ||||| |||||||||| ||| |||||||| |||| ||||||||    
T  15809464 tctcttttgtaacgttactcatcat-atagtggatcagagggctgctctcttccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 15809556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 41384990 - 41385082
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| |  | | | |||||||||||||||||||||||||| ||| |||||||| |||| ||||||||    
T  41384990 tctcttttgtaacgttactcatcat-atagtgaaacagagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaatt 41385082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 3 - 95
Target Start/End: Original strand, 4424266 - 4424356
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||  ||||||||||| ||||||||| | | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  4424266 tcttttgtaacattactcatcat-atagtggatcagagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 4424356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 13985003 - 13984949
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||| ||||| |||| ||||||||||| |||||||||||||||||||||||    
T  13985003 ttggttgctcgattaatttt-ctccacacatctagtattttattggtgtgattttt 13984949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 16757317 - 16757254
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  16757317 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 16757254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 25684775 - 25684838
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  25684775 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 25684838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 27911514 - 27911565
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  27911514 ttgctccacacatcaagttttttattggtgtgatttttcaacaaattcacaa 27911565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 27957933 - 27957984
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| ||||||||||||||||||| ||  |||||||||    
T  27957933 ttgctccacacatcaagttttttattggtgtgatttttcaacaaattcacaa 27957984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 28328040 - 28328103
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  28328040 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 28328103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 28890898 - 28890961
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  28890898 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 28890961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 608980 - 609072
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||||| |||| ||||| ||| |||||||| |||| ||||||||    
T  608980 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctcccccagactaagtcaa-tttggaccgaactgggtcaacaaatt 609072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 3874416 - 3874485
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||| |||| | |||||||||||||||||| | ||||||||||||||||| || ||||||||||    
T  3874416 ttggttgcttggttatctcttgctccacacatcaagt-tgttattggtgtgatttttcaacgaattcacaa 3874485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 18811125 - 18811186
Alignment:
Q  162 ttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||| |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||    
T  18811125 ttgattttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttt 18811186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 32339555 - 32339647
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  32339555 tctcttttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggttaacaaatt 32339647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 189 - 222
Target Start/End: Original strand, 3898936 - 3898969
Alignment:
Q  189 ctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||||||||||||||    
T  3898936 ctccacacatcaagtattttattggtgtgatttt 3898969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 4812537 - 4812472
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctct 108  Q
    ||||||||||||| | |||||||||   ||||||||||| |||||||||||| || ||||||||||    
T  4812537 ctgctctctccccaagactaggtcataattagaccgaactgggtaaacaaatatcttgtgttctct 4812472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 23179610 - 23179558
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  23179610 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 23179558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 43530538 - 43530593
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||    
T  43530538 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttt 43530593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 14477687 - 14477738
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  14477687 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 14477738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 15956203 - 15956234
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtg 32  Q
    ||||||||||||||||||||||||||||||||    
T  15956203 tctcttttgtaaagttactcatcattatagtg 15956234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 21034002 - 21034068
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    ||||||| | |||||||||||||||   ||||||||||| ||||||||||| ||| ||||||||||||    
T  21034002 ctgctcttttccccatactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttt 21034068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 28332763 - 28332826
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||| ||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  28332763 ctgctctctcctccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 28332826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 42 - 108
Target Start/End: Complemental strand, 33838971 - 33838904
Alignment:
Q  42 actgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa-tttcgtgtgttctct 108  Q
    |||||||||||||||||| || |||| | || |||||||  ||||||||||| |||||||||||||||    
T  33838971 actgctctctcccccataatatgtcagtattcgaccgaattgggtaaacaaattttcgtgtgttctct 33838904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 2467932 - 2467896
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  2467932 ttgctccacacatcaagtttattattggtgtgatttt 2467896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 3883507 - 3883452
Alignment:
Q  168 ttggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||  ||||||||||||||||||| | |||||| ||||||||||    
T  3883507 ttggttgcttgattatcctttgctccacacatcaagt-tgttattgatgtgattttt 3883452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 9021156 - 9021104
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||| ||| |||||||||   ||||||||||| |||||||||||||    
T  9021156 ctgctctctccaccagactaggtcatcattagaccgaactgggtaaacaaatt 9021104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 132 - 223
Target Start/End: Complemental strand, 13985773 - 13985683
Alignment:
Q  132 cttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||||| | |  ||||||||| | |||||| |||||||| ||| |||||| |||||||||| |  |||||||||||||||    
T  13985773 cttttgcttgtgtttataactgtcacccacgttgtt-ttggttacttgattaattt-gctccaaacatcaagtactagattggtgtgattttt 13985683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 17799473 - 17799421
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||| |||| |||||||||   ||||||||||| |||||||||||||    
T  17799473 ctgctctctctcccagactaggtcatcattagaccgaactgggtaaacaaatt 17799421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 225
Target Start/End: Original strand, 21034144 - 21034184
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtgatttttta 225  Q
    |||||||||| |||||||| ||||||||||||| |||||||    
T  21034144 tttgctccacgcatcaagttttttattggtgtggtttttta 21034184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 27827427 - 27827463
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  27827427 ttgctccacacatcaagtttgttattggtgtgatttt 27827463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 27829583 - 27829634
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  27829583 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 27829634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 27829738 - 27829774
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  27829738 ttgctccacacatcaagtttgttattggtgtgatttt 27829774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 28283133 - 28283078
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  28283133 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 28283078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 30423348 - 30423400
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||| ||| | |||||||   |||||||||||||||||||||||||    
T  30423348 ctgctctctcctccagagtaggtcatcattagaccgaacagggtaaacaaatt 30423400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 172 - 223
Target Start/End: Original strand, 30423475 - 30423524
Alignment:
Q  172 ttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||| || | ||||||||||||||||||  |||||||||||||||||||    
T  30423475 ttgcttggttttatttgctccacacatcaag--ttttattggtgtgattttt 30423524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 37214312 - 37214199
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttcgtgtgttctctttttctttctctcgctg-tttctactttt-g 137  Q
    ||||||||| ||||| |||||||||| ||| |||||||| |||| ||||||   ||| |||| |||||||  | | ||||||| || ||||||||||| |    
T  37214312 ctgctctctaccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttttctcttcctttctctctcgttgttttctacttttgg 37214214  T
Q  138 cttgtgtttataatt 152  Q
    |||||||||||||||    
T  37214213 cttgtgtttataatt 37214199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 124; Significance: 2e-63; HSPs: 75)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 40699540 - 40699761
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||  | | |  |||||| ||||||| ||||||||| | |||||||||||  |||||||||||||||||    
T  40699540 tctcttttgtaaagttactcatcattatagtggaacagagggatgctctttcccccagactaggtcagtattagaccgaactaggtaaacaaatttcgtg 40699639  T
Q  101 tgttctctttttctttctctcgc--tgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    |||||||| ||||||||||||||  | ||||||||||||||||||||||||||| ||| ||| |||||||||||| |||||||| |||||||||||||||    
T  40699640 tgttctctctttctttctctcgctatttttctacttttgcttgtgtttataattgttctcacattgatattggttacttgatta-ttttgctccacacat 40699738  T
Q  199 caagtattttattggtgtgattt 221  Q
    |||||| ||||||| ||||||||    
T  40699739 caagtaatttattgatgtgattt 40699761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 20146698 - 20146461
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | |||||||||||| || |||| |||| | || |||||||| |||||||| |||||||||    
T  20146698 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctccctcagactaagtcagtattggaccgaactgggtaaacgaatttcgtg 20146599  T
Q  101 tgttctctttttcttt-ctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    || ||||| ||||||| |||||| ||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||||  ||| || |||||||    
T  20146598 tgatctctctttcttttctctcgttgttttctacttttgcttgtgtttataattgttcccatgttgatattggttgcttgatta-ctttacttcacacat 20146500  T
Q  199 caagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||||||||||| || ||||||||||    
T  20146499 caagtattttattggtgtgatttttcaacgaattcacaa 20146461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 45 - 237
Target Start/End: Original strand, 8173539 - 8173731
Alignment:
Q  45 gctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttc-tttctctcgctg-tttctacttttgcttgt 142  Q
    ||||||||||||||||||||||| | || |||||||| ||||||||||||||||||||||| || |||| ||||||||| || ||| ||| |||| ||||    
T  8173539 gctctctcccccatactaggtcagtattggaccgaactgggtaaacaaatttcgtgtgttcactctttcttttctctcgttgttttttacctttgtttgt 8173638  T
Q  143 gtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| |||||||||||||||||||||||||||||  ||||||||| ||||  ||||||||||||||||||||||| || ||||||||||    
T  8173639 gtttataattgttcccacgttgatattggttgcttgatta-ctttgctccatacat-tagtattttattggtgtgatttttcaacgaattcacaa 8173731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 94; E-Value: 1e-45
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 17897331 - 17897101
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||||||||||||||| ||    | | ||||||||||||| | ||||||||| | || | |||||| ||||||||||||||||||||||    
T  17897331 ttttgtaaagttactcatcattatagtagaacggatggctgctctctcccc-agactaggtcagtattggtccgaactgggtaaacaaatttcgtgtgtt 17897233  T
Q  105 ctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    |||| ||||||||||||| || ||||||||||||||||||||||||| | |   ||  ||  | ||||||||||||||| ||||||||||||||||||||    
T  17897232 ctctctttctttctctcgttgttttctacttttgcttgtgtttataactgtcatcaactttgttttggttgcttgatta-ttttgctccacacatcaagt 17897134  T
Q  204 attttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| ||| ||||||||| ||||||||||    
T  17897133 attttattgatgt-attttttaacgaattcacaa 17897101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 6 - 219
Target Start/End: Original strand, 33604092 - 33604305
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||    | |||||||||||||||||   ||| ||  | || || | ||| ||||||||||||||||||||||     
T  33604092 tttgtaaagttactcatcattatagtggaacggatgactgctctctcccccaagatagatcggtattggaacaaactgggtaaacaaatttcgtgtgtta 33604191  T
Q  106 tctttttctttctctcgctgtttc-tacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    ||| ||||||||||| | |||||| || ||||||||||  |||||||| || |||||||||||||||||||||||||||  |||||| ||||||||||||    
T  33604192 tctctttctttctcttgttgtttcttagttttgcttgt-attataattgttacccacgttgatattggttgcttgatta-atttgcttcacacatcaagt 33604289  T
Q  204 attttattggtgtgat 219  Q
    ||||||||||||||||    
T  33604290 attttattggtgtgat 33604305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 46 - 224
Target Start/End: Original strand, 20592288 - 20592468
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgct-gtttctacttttgcttgtgt 144  Q
    |||||||||||| ||||||||| | || |||||||  || ||||||||||||||||||||||| ||||||||||| | |  ||||||||||||||||||     
T  20592288 ctctctcccccagactaggtcagtattggaccgaattggataaacaaatttcgtgtgttctctctttctttctcttgatattttctacttttgcttgtga 20592387  T
Q  145 ttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    ||||||  |||||   ||| ||| | |||||||||||||||||  |||||| |||||||| |||||||||||||||||||||||    
T  20592388 ttataa--cttccatacactttg-ttttggttgcttgattattacttgctctacacatcacgtattttattggtgtgatttttt 20592468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 13828289 - 13828179
Alignment:
Q  126 tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| |||||||||||| | |  ||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||    
T  13828289 tttctacttttgtttgtgtttataactgtcacccacgttgatattggttgcttgattatttt-gctccacacatcaaatattttattggtgtgat-tttt 13828192  T
Q  225 aaggaattcacaa 237  Q
    || ||||||||||    
T  13828191 aacgaattcacaa 13828179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 11578198 - 11577973
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| |||||||||||||||||| ||    | | ||||||| ||||||| ||||| ||| |||||||||||||  |||||||||||||||||    
T  11578198 tctcttttgtaaggttactcatcattatagtcgaacggagggctgctctttcccccagactagatcagttttagaccgaactaggtaaacaaatttcgtg 11578099  T
Q  101 tgttctct-ttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcccacgttgatattggttgcttgattatt-tttgctccacac 196  Q
    |||| ||| |||||||||||||| || ||||||||||| ||||||||||| | |||     || || || |||||||||||||||||  ||| |||||||    
T  11578098 tgttttctcttttctttctctcgttgttttctacttttggcttgtgtttaaacttccatatac-tttattttggttgcttgattattacttgttccacac 11578000  T
Q  197 atcaagtattttattggtgtgatttttt 224  Q
    ||||||| |||||||  |||||||||||    
T  11577999 atcaagt-ttttattaatgtgatttttt 11577973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 116 - 223
Target Start/End: Original strand, 7503073 - 7503179
Alignment:
Q  116 tctctcgctgtttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtg 215  Q
    ||||||| |||||  || ||||||||||||||||||| |  ||||| |||||||||||||||||||| |||| |||||||||||||||||||||||||||    
T  7503073 tctctcgttgttttaacctttgcttgtgtttataattgtctccacgctgatattggttgcttgattaatttt-ctccacacatcaagtattttattggtg 7503171  T
Q  216 tgattttt 223  Q
    | ||||||    
T  7503172 taattttt 7503179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 31732866 - 31732732
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||| ||| |    | ||||||||||||||||| |||||||||| ||| |||||| | ||||||||||| ||||||    
T  31732866 tctcttttgtaaagttactcatcattattgtgaaacggaggactgctctctcccccagactaggtcaa-tttggaccgagctgggtaaacaaa-ttcgtg 31732769  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttg 137  Q
    |||||||| | | |||||||||||| ||||||||||||    
T  31732768 tgttctctatct-tttctctcgctgttttctacttttg 31732732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 42923598 - 42923373
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||| |||| |||||| |    | | ||||||||||||| |||||||||||| ||| |||||||| |||| |||||||| |  |    
T  42923598 tctcttttgtaaagttactcgtcat-atagtgaaacggagggctgctctctcccctatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 42923501  T
Q  100 gtgttctct----ttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    |||||||||    |||||| ||||||| || |||||||||||| ||||||||||||||| || |   ||| ||| | |||||||||||||||| | ||||    
T  42923500 gtgttctctcttcttttctctctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtttttggttgcttgattatctcttgc 42923401  T
Q  190 tccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||| | |||||||||||    
T  42923400 tccacacatcaagtttgttattggtgtg 42923373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 10942485 - 10942379
Alignment:
Q  116 tctctcgctgtttctacttttgcttgtgttt-ataattcttcc-cacgttgatattggttgcttgattatttttgctccacacatcaagtattttattgg 213  Q
    ||||||| |||||  |||||||||||||||| |||||| |  | ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  10942485 tctctcgttgttttaacttttgcttgtgttttataattatcacacacgttgatattggttgcttggttaatttt-ctccacacatcaagtattttattgg 10942387  T
Q  214 tgtgattt 221  Q
    ||||||||    
T  10942386 tgtgattt 10942379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 116 - 221
Target Start/End: Complemental strand, 10948354 - 10948248
Alignment:
Q  116 tctctcgctgtttctacttttgcttgtgttt-ataattcttcc-cacgttgatattggttgcttgattatttttgctccacacatcaagtattttattgg 213  Q
    ||||||| |||||  |||||||||||||||| |||||| |  | ||||||||||||||||||||| ||| |||| |||||||||||||||||||||||||    
T  10948354 tctctcgttgttttaacttttgcttgtgttttataattatcacacacgttgatattggttgcttggttaatttt-ctccacacatcaagtattttattgg 10948256  T
Q  214 tgtgattt 221  Q
    ||||||||    
T  10948255 tgtgattt 10948248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 19007806 - 19008035
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  ||||||||  ||| |||||||| |  |    
T  19007806 tctcttttgtaacgttactcatcat-atagtgaaacgaagggctgctctctcccccagactaggtcaatttg-gaccgaactaggtcaacaaattctttt 19007903  T
Q  100 gtgttctctttttctttctctcgc--tgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||||||| ||  |||||||| |  ||||| ||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||||||||  ||||||    
T  19007904 gtgttctctattcatttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattattccttgctc 19008002  T
Q  192 cacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| | ||||||||||||||||||    
T  19008003 cacacatcaagtttgttattggtgtgatttttt 19008035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 5 - 116
Target Start/End: Complemental strand, 37963027 - 37962917
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||| |||||||||||||| |  |   ||||| |||||| |||| ||||||| |||||  |||||||| ||||||||||||||||||||||    
T  37963027 ttttgtaaagttattcatcattatagtgaaacagtggactgatctctctcccacactaggttaatttg-gaccgaactgggtaaacaaatttcgtgtgtt 37962929  T
Q  105 ctctttttcttt 116  Q
    ||||||||||||    
T  37962928 ctctttttcttt 37962917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 6258906 - 6258687
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||| ||||||||| |    | | ||||||||||||| |||||||||||| ||| |||||||| |||| |||||||| |  |    
T  6258906 tctcttttgtaaagttactcattattatagtgaaacggagggctgctctctcccc-atactaggtcaa-tttggaccgaactgggtcaacaaattctttt 6258809  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | |||||||| |||||||   ||||||    
T  6258808 gtgttctctcttcctttctctctcgctgttttctacttttagcttgtgtttataattgttccagacactttg-ttttggttgcctgattatcacttgctc 6258710  T
Q  192 cacacatcaagtattttattggt 214  Q
    |||||||||||| | ||||||||    
T  6258709 cacacatcaagtttgttattggt 6258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 43623669 - 43623439
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||||||  ||||||||  ||| |||||||| |  |    
T  43623669 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccccaaactaggtcaatttg-gaccgaactaggtcaacaaattctttt 43623572  T
Q  100 gtgttctctttttctttctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgct 190  Q
    ||||||||| ||  ||||||||||||||    |||||||||| ||| || |||||||| ||||   ||| || || |||||||| ||||||| | |||||    
T  43623571 gtgttctctcttcttttctctcgctgttgttttctacttttggcttatgattataattgttccatacactttaattttggttgcctgattatctattgct 43623472  T
Q  191 ccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||   |||||||||||||||||    
T  43623471 ccacacatcaagttagttattggtgtgattttt 43623439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 35028783 - 35028959
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctgttt-ctacttttgcttg 141  Q
    |||||||||||||| |||||||||| | |   | ||||| || |||||||||||  ||| |||||| ||||||||| || |||||| ||| |||||||||    
T  35028783 ctgctctctcccccttactaggtcagtat---atcgaactggctaaacaaattttttgtattctctctttctttctttcactgttttcta-ttttgcttg 35028878  T
Q  142 tgtttataattcttc-ccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    | ||||||||| ||  |||||||| | ||| ||| ||||||||||| ||||||||||| || |||||||||||||||||||||    
T  35028879 tttttataattgttatccacgttgtt-ttgattgtttgattatttt-gctccacacattaaatattttattggtgtgattttt 35028959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 99 - 222
Target Start/End: Complemental strand, 28459182 - 28459054
Alignment:
Q  99 tgtgttctctttttctttctctcgctgttt-ctacttttgctt-gtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcc 192  Q
    |||||||||| |||||||||||| |||||| ||||||||| || |||||||||||| ||||   ||| ||| | ||||||||||||||||   |||||||    
T  28459182 tgtgttctctctttctttctctccctgttttctacttttggtttgtgtttataattgttccatacactttgtt-ttggttgcttgattatcacttgctcc 28459084  T
Q  193 acacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||| ||||||||||||||||||    
T  28459083 acacatcaagtgttttattggtgtgatttt 28459054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 22874296 - 22874424
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataaga-ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcg 98  Q
    |||||||||||||||||||||||||||||||| |   | ||| |||||||||||| ||||||||||||| ||| |||||||  ||||||||||||| ||     
T  22874296 tctcttttgtaaagttactcatcattatagtgaaac-tgagagctgctctctccctcatactaggtcaa-tttggaccgaattgggtaaacaaattctct 22874393  T
Q  99 tgtgttctctttttc-tttctctcgctgttt 128  Q
    |||||||||| |||| ||||||||| |||||    
T  22874394 tgtgttctctctttcttttctctcgttgttt 22874424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 150
Target Start/End: Complemental strand, 27136175 - 27136070
Alignment:
Q  47 tctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctgtttct--acttttgcttgtgt 144  Q
    ||||||||| | |||| |||| | || |||||||| | ||||||||||||  |||||||||||||||||||||||| ||||| |  ||||||||||||||    
T  27136175 tctctccccaaaactaagtcagtattggaccgaactgagtaaacaaattttatgtgttctctttttctttctctcgttgttttttcacttttgcttgtgt 27136076  T
Q  145 ttataa 150  Q
    ||||||    
T  27136075 ttataa 27136070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 133 - 222
Target Start/End: Complemental strand, 43482809 - 43482720
Alignment:
Q  133 ttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||||| |  |||||||||||||| |||||||||||| ||| |||||||| |||||||||||||||  |||||||||    
T  43482809 ttttgcttgtgtttataattgtcacccacgttgatattagttgcttgattaattt-gctccacatatcaagtattttatttatgtgatttt 43482720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 121
Target Start/End: Complemental strand, 6264238 - 6264118
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  6264238 tctcttttgtaaagttactcatcattatagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 6264140  T
Q  100 gtgttctctttttctttctctc 121  Q
    ||||||||| || |||||||||    
T  6264139 gtgttctctcttcctttctctc 6264118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 14837433 - 14837661
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |    | |  |||||||||||||| |||||||||| ||| |||||||| | || |||||||| |  |    
T  14837433 tctcttttgtaaggttactcatcattatagtgaaacggatggatgctctctcccccagactaggtcaa-tttggaccgaactgagtcaacaaattctttt 14837531  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttc---ccacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||| ||||||| |||||||||||||||| |||    ||| ||| | ||||||||||||||||   ||||||    
T  14837532 gtgttctctcttcctttctctctcgctgttttatacttttggcttgtgtttataattgttctatacactttg-ttttggttgcttgattatcacttgctc 14837630  T
Q  192 cacacatcaagtatt-ttattggtgtgattt 221  Q
    ||||||||||||||| |||||| ||||||||    
T  14837631 cacacatcaagtattgttattgatgtgattt 14837661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 203
Target Start/End: Original strand, 17848606 - 17848813
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | |||||||||||||||||||||||||||| ||| ||| |||| |||| |||||||| |  |    
T  17848606 tctcttttgtaacgttactcatcat-atagtgaaacggatgactgctctctcccccatactaggtcaa-tttggactgaactgggtcaacaaattctttt 17848703  T
Q  100 gtgttctctttttctttctctcgctg-tttctac-ttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| ||  |||||||||||| ||||||| ||||| ||| |||||||||| || |   |||   ||| ||||||||||||||||   ||||||||    
T  17848704 gtgttctctcttcttttctctcgctgttttctactttttgtttgcgtttataattgtttcatacactgcgattttggttgcttgattatcacttgctcca 17848803  T
Q  194 cacatcaagt 203  Q
    ||||||||||    
T  17848804 cacatcaagt 17848813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 11739649 - 11739556
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||| || |||||||||||||||||||||    | ||||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  11739649 tctcttttgaaaggttactcatcattatagtggaacggatgactgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 11739556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 43 - 219
Target Start/End: Original strand, 3022379 - 3022562
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttt--tctttctctcgctg-tttctactttt-g 137  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| ||  | ||||||||| || ||||| ||||| |    
T  3022379 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttcctttttctctcgttgttttctgcttttgg 3022477  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgat 219  Q
    ||||||||||||||| ||||   ||| ||| | ||||||||||||||||   |||||||||||||||||| | ||||| |||||||    
T  3022478 cttgtgtttataattgttccatacactttg-ttttggttgcttgattatcacttgctccacacatcaagtttgttatttgtgtgat 3022562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 111
Target Start/End: Complemental strand, 13828432 - 13828322
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggatta-taagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    ||||||||||||| |||||||| |||||||||||  | | || || |||||||||| | ||||||||| || | |||||||| || ||||||||||||||    
T  13828432 tctcttttgtaaaattactcataattatagtggaacagttag-ctactctctcccctagactaggtcagttctggaccgaactggataaacaaatttcgt 13828334  T
Q  100 gtgttctctttt 111  Q
    ||||||| ||||    
T  13828333 gtgttctttttt 13828322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7463037 - 7462826
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggt-aaacaaatttcgt 99  Q
    |||||||||||| ||||| ||| || |||||||||   | | ||||||||||||||| |||||||||||||| |||||||| |||| ||| |||     |    
T  7463037 tctcttttgtaacgttacccattat-atagtggatcggagggctgctctctcccccagactaggtcaattttggaccgaactgggtcaaaaaaaaaaatt 7462939  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || ||||||||||||||    ||||||||||| ||||||| |||||||| || |   ||| ||| | ||||||||||||||||  |||||    
T  7462938 gtgttctctcttctctttctctcgctgttgttttctacttttggcttgtgattataattgtttcatacactttg-ttttggttgcttgattatcctttgc 7462840  T
Q  190 tccacacatcaagt 203  Q
    ||||||||||||||    
T  7462839 tccacacatcaagt 7462826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 23452326 - 23452234
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  23452326 tctcttttgtaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 23452234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 39680177 - 39680255
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || |||||||||| | ||| ||||||    
T  39680177 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctctctctctctctctc 39680255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 17943631 - 17943720
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||  ||||||||||||||||||| | |   ||||||||||||||| |||||||||   |||||||||||  ||||||||||||    
T  17943631 tttgtaaagaaactcatcattatagtggatcagagagctgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaatt 17943720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 34575059 - 34574992
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| ||| | ||||||| |||||||||||||||||||||| |||||| ||||||||||    
T  34575059 ttggttgcttgattaattt-gttccacacgtcaagtattttattggtgtgat-ttttaacgaattcacaa 34574992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 40032143 - 40031982
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||| |||||||||||||||||||||| |    | | | |||||||||| || |||||||||| ||| |||||||| |||| |||||||| |  |    
T  40032143 tctcttttgcaaagttactcatcattatagtgaaacggagggccgctctctccctcagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 40032045  T
Q  100 gtgttctctttttc-tttctctcgctg----tttctacttttgcttgtgtttataattcttcc 157  Q
    || |||||| || | ||||||||||||    ||||||| ||||||||||||||||||| ||||    
T  40032044 gtattctctcttccttttctctcgctgttgttttctacatttgcttgtgtttataattgttcc 40031982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22287425 - 22287203
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| | |  | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||||| |  |    
T  22287425 tctcttttgtaacgttactcatcat-atagtgaaatggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 22287328  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||||||| |||| ||||| ||||||||| ||||   |||  || | |||||||||||| |||   ||||||    
T  22287327 gtgttctctcttcctttctctctcgctgttttctacgtttgacttgtttttataattgttccatacactatg-ttttggttgcttgactatcccttgctc 22287229  T
Q  192 cacacatcaagtattttattggtgtg 217  Q
    |||||||||||| | |||||||||||    
T  22287228 cacacatcaagtttgttattggtgtg 22287203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 28570308 - 28570256
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||| ||| |||| ||||||||||||||| ||||||||||    
T  28570308 tttgctccacacatcaaatatattatcggtgtgattttttaacgaattcacaa 28570256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 2736337 - 2736400
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  2736337 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 2736400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 15697378 - 15697432
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||  || |||| |||||||||||||||||||||||||||||||    
T  15697378 ttggttgcttgattaaatt-gctctacacatcaagtattttattggtgtgattttt 15697432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 17462568 - 17462631
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  17462568 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 17462631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 17849283 - 17849512
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |      | |||||||||||| ||||||||||||||||  |||   || |||| |||||||| |  |    
T  17849283 tctcttttgtaaggttactcatcattatagtgaaacggggg-ctgctctctcccacatactaggtcaatttg-gacaagactgggtcaacaaattctttt 17849380  T
Q  100 gtgttctctttttctttctctcgc--tgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||||||| || ||||||||| |  ||||| ||||||||| |||||||||| |||| ||||   ||| ||| | |||||||||||| |||   ||||||    
T  17849381 gtgttctctcttcctttctctcccgttgttttctacttttggcttgtgtttaaaattgttccatacactttgtt-ttggttgcttgactatcccttgctc 17849479  T
Q  192 cacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| | ||||||||||||||||||    
T  17849480 cacacatcaagtttgttattggtgtgatttttt 17849512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 28196844 - 28197029
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttcgtgtgttctctttttctttctctcgctg-tttctactttt-g 137  Q
    ||||||||||||||| ||||||||||||   |||||||| |||| ||||||   ||| ||||  |||||| || | |||||||||| ||||||||||| |    
T  28196844 ctgctctctcccccagactaggtcaatt---gaccgaactgggtcaacaaattcttttgtgttctctcttcttttctctctcgctgttttctacttttgg 28196940  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||| || |   ||| ||| | ||||||||| || |||   |||||||||||||||| | | |||||||||||||||||    
T  28196941 cttgtgtttataattgtttcatacactttg-ttttggttgctggactatcccttgctccacacatcaaatttgttattggtgtgattttt 28197029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 30720532 - 30720467
Alignment:
Q  170 ggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||| ||| ||||| ||||| |||||||||| |||||||||||||||| ||||||||||    
T  30720532 ggttgcttgattaattt-gctccgcacat-aagtattttactggtgtgattttttaaagaattcacaa 30720467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 39687115 - 39687178
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  39687115 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 39687178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 45679855 - 45679918
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  45679855 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 45679918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19502100 - 19502008
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  19502100 tctcttttgtaacgatactcatcat-atagtggatcgaagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 19502008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21520782 - 21520556
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  ||||||||   || |||||||| |  |    
T  21520782 tctcttttgtaacgttactcatcat-atagtgaaacggatggctgctctctcccccagactaggtcaatttg-gaccgaactttgtcaacaaattctttt 21520685  T
Q  100 gtgttctctttttctttctctc--gctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttg 188  Q
    ||||||||| ||  ||||||||  ||||||    |||||||||| ||||||||||||||| ||||   ||| || || |||||||| |||||||   |||    
T  21520684 gtgttctctcttcgtttctctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttaattttggttgcctgattatcacttg 21520585  T
Q  189 ctccacacatcaagtattttattggtgtg 217  Q
    ||||||||||||||| | |||||||||||    
T  21520584 ctccacacatcaagtttgttattggtgtg 21520556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 22407543 - 22407384
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||| |  |    
T  22407543 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaacttggtcaacaaattctttt 22407446  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||||||| || |||  ||||||| || ||||||||||| |||||||||||||||| ||||    
T  22407445 gtgttctctcttcctttctctctcgatgttttctacttttggcttgtgtttataattgttcc 22407384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 36561052 - 36560983
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||  |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  36561052 ttggttgcttgattattccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 36560983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 45280073 - 45280004
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||||||    
T  45280073 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaattt 45280004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 242
Target Start/End: Original strand, 35107460 - 35107704
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaat-ttcgt 99  Q
    |||||||||||| |||||||||||||||||||||    | |  || |||||  |||| ||||||||| | || |||||||   ||||||||||| ||  |    
T  35107460 tctcttttgtaatgttactcatcattatagtggaacggatggttgttctctttcccagactaggtcagtattggaccgaaataggtaaacaaatattttt 35107559  T
Q  100 gtgttctctttttc-tttctctcgctg---tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatt-tttgctccac 194  Q
    ||||||||| |||| ||||||||||||   ||||||| ||| ||| |||||||||||  || | |  | || ||  |||||||||||||  |||| ||||    
T  35107560 gtgttctctctttcttttctctcgctgttttttctacctttacttatgtttataatt-gtcactcacttattttaattgcttgattattacttgcaccac 35107658  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaataagc 242  Q
    | |||||||| ||||||||||||| |||| || |||||||||||||||    
T  35107659 atatcaagta-tttattggtgtga-ttttcaacgaattcacaataagc 35107704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 27105140 - 27105196
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  27105140 ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 27105196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 30479127 - 30479179
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  30479127 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 30479179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42064721 - 42064773
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  42064721 ctgctctctcccccagactaggtcaaatttggaccgaactgggtcaacaaatt 42064773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 6 - 94
Target Start/End: Original strand, 43139545 - 43139632
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaat 94  Q
    ||||||||||||||||||||||||||||   | | ||||| ||| | ||| ||||||||||| | |||||||||||  |||||||||||    
T  43139545 tttgtaaagttactcatcattatagtggtacagaggactgttcttttccctatactaggtcagtattagaccgaac-tggtaaacaaat 43139632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 2741073 - 2741136
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   |||||||||||  ||||||||||| || ||||||||    
T  2741073 ctgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaatatcttgtgttct 2741136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Complemental strand, 13910119 - 13910042
Alignment:
Q  16 tactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||| ||||||||| | | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  13910119 tactcatcat-atagtggatcagatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 13910042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 22874466 - 22874517
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  22874466 ttgctccacacatcaagtttattattggtgtgatttttcatcgaattcacaa 22874517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 33671016 - 33670953
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| | |||||||||| || ||||||||    
T  33671016 ctgctctctcccccagactaggtcatcattagaccgaactgcgtaaacaaatatcttgtgttct 33670953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 3 - 34
Target Start/End: Complemental strand, 41303121 - 41303090
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||    
T  41303121 tcttttgtaaagttactcatcattatagtgga 41303090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 42453820 - 42453874
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  42453820 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 42453874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5375435 - 5375343
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||  ||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  5375435 tctcttttgtaacattactcatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 5375343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 19504435 - 19504343
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||| ||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  19504435 tctcttttgtaacgatactcatcat-atagtggatcggagggctgctatctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 19504343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 150
Target Start/End: Complemental strand, 22163070 - 22162961
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gct 139  Q
    ||||||||||||||| |||||||||| ||| || ||||| |||| |||||||| |  |||||||||| ||  ||||||||| || ||||||||||| |||    
T  22163070 ctgctctctcccccagactaggtcaa-tttggatcgaactgggtcaacaaattcttttgtgttctctcttcttttctctcgttgttttctacttttggct 22162972  T
Q  140 tgtgtttataa 150  Q
    |||| ||||||    
T  22162971 tgtgcttataa 22162961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 36558792 - 36558723
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  36558792 ttggttgcttgattatcccttgctccacacatcaagt-tattattggtgtgatttttcatcgaattcacaa 36558723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42452947 - 42453038
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||| ||||| |||||||||| ||| |||||||| |||| ||||||||    
T  42452947 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctct-ccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 42453038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 221
Target Start/End: Complemental strand, 45279913 - 45279860
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattt 221  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||    
T  45279913 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattt 45279860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 15694070 - 15694103
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||||||||||||| |||||||    
T  15694070 tctcttttgtaaagttactcatcattttagtgga 15694103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 23452154 - 23452094
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||    
T  23452154 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 23452094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 27104968 - 27105055
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||  ||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  27104968 tttgtaacattactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 27105055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 219
Target Start/End: Original strand, 39287442 - 39287475
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgat 219  Q
    |||||||||||||||| |||||||||||||||||    
T  39287442 ttgctccacacatcaaatattttattggtgtgat 39287475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 12781270 - 12781218
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   |||||||||||  ||||||||||||    
T  12781270 ctgctctctcccccagactaggtcatcattagaccgaactaggtaaacaaatt 12781218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 20054814 - 20054762
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||| ||| |||||||||   ||||||||||| |||||||||||||    
T  20054814 ctgctctctccaccagactaggtcatcattagaccgaactgggtaaacaaatt 20054762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 27517688 - 27517636
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   |||||||||||  ||||||||||||    
T  27517688 ctgctctctcccccagactaggtcatcattagaccgaacttggtaaacaaatt 27517636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 35217881 - 35217826
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||    
T  35217881 ttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgattttt 35217826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 38191145 - 38191197
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||| | |||||||||   ||||||||||| |||||||||||||    
T  38191145 ctgctctctcccctagactaggtcatcattagaccgaactgggtaaacaaatt 38191197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 122; Significance: 3e-62; HSPs: 102)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 22295412 - 22295644
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    |||||||||||||||||||||||||||||| |  |  | |||||||||||||| |||||| || | || ||| |||| ||||||||||||||| ||||||    
T  22295412 ttttgtaaagttactcatcattatagtggaatggagaattgctctctcccccacactagggcagtattggactgaactgggtaaacaaatttcatgtgtt 22295511  T
Q  105 ctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    |||| || ||||||||||||| ||||||| ||||||||||||||||||| |||||||  ||||||||||| |||||||| |||||||| | |||||||||    
T  22295512 ctctcttcctttctctcgctgttttctacctttgcttgtgtttataattgttcccacactgatattggttacttgatta-ttttgctctagacatcaagt 22295610  T
Q  204 attttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||||||||| ||||||||||    
T  22295611 attttattggtgtgattttttaacgaattcacaa 22295644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 108; E-Value: 6e-54
Query Start/End: Original strand, 5 - 224
Target Start/End: Complemental strand, 31983613 - 31983399
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||| ||||||||||||||||||||    | | ||||||||||||  ||||||||| | | ||||||| ||| ||||||||||||||||||||||    
T  31983613 ttttgtaaaattactcatcattatagtggaacggagggctgctctctccca-atactaggtaagtattagaccaaactgggtaaacaaatttcgtgtgtt 31983515  T
Q  105 ctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    ||    |||||||||||| ||||| |||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||| |    
T  31983514 ct----ttctttctctcgttgttttctacttttacttgtgtttataattgttcccacgttgatattggttgcttgatta-ttttgctccacacatcaaat 31983420  T
Q  204 attttattggtgtgatttttt 224  Q
    ||||||||| |||||||||||    
T  31983419 attttattgatgtgatttttt 31983399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 25357885 - 25358122
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc-gt 99  Q
    ||||||||||||||||||||||||||||||| ||    |   ||||||||||||| | ||||||||| | || |||| ||| ||||||||||||||  ||    
T  25357885 tctcttttgtaaagttactcatcattatagtagaacggatagctgctctctcccctagactaggtcagtattggacctaactgggtaaacaaatttttgt 25357984  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacat 198  Q
    ||||||||| || |||||||||| ||||| |||||||||||||||||||||||| ||||||||||| ||||||||||||||||   ||| ||||||||||    
T  25357985 gtgttctctctt-ctttctctcgttgttttctacttttgcttgtgtttataattgttcccacgttgttattggttgcttgatt-gctttcctccacacat 25358082  T
Q  199 caagtattttattggtgtgatttttt-aaggaattcacaa 237  Q
    |||||||||||||||||||||||||| || ||||||||||    
T  25358083 caagtattttattggtgtgattttttcaacgaattcacaa 25358122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 16185920 - 16185688
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||||||||||||||||||||  | | | ||||||||||||||| ||||||||| |||| |||||||| |||||||||||||||||||||||    
T  16185920 tttgtaaagttactcatcattatagtggaacagagggctgctctctcccccagactaggtcagttttggaccgaactgggtaaacaaatttcgtgtgttc 16185821  T
Q  106 tct-ttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaag 202  Q
    ||| |||| | | ||||| || ||||||||||||||||||||||||| | |  ||||| ||| | |||||||||||||||  ||||||||| ||||||||    
T  16185820 tctcttttttgtttctcgttgttttctacttttgcttgtgtttataactgtcacccac-ttg-ttttggttgcttgatta-atttgctccatacatcaag 16185724  T
Q  203 tattttattggtgtgat-tttttaaggaattcacaa 237  Q
    ||||||||||||||||| |||| || ||||||||||    
T  16185723 tattttattggtgtgatcttttcaacgaattcacaa 16185688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 18534922 - 18534703
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||  ||||||| |||||||||||    | |  ||||||| |||||| ||||||| | |||| |||||||||||||||||||||||||||    
T  18534922 tctcttttgtaaaactactcataattatagtggaacggaggggtgctctcccccccagactaggtaagttttggaccgaacagggtaaacaaatttcgtg 18534823  T
Q  101 tgttctctttttctttctctcgct-gtttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    |||||||| |||||||||||||||  |||||||||||| ||||||||||||  |||||   ||| ||| | |||||||||||||||||  ||||||||||    
T  18534822 tgttctctctttctttctctcgctattttctacttttgtttgtgtttataa--cttccatacactttg-ttttggttgcttgattattacttgctccaca 18534726  T
Q  196 catcaagtattttattggtgtga 218  Q
    |||||||||||||||||||||||    
T  18534725 catcaagtattttattggtgtga 18534703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 90; E-Value: 3e-43
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 18537564 - 18537345
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||||| ||||||| |||| |||||||| |||||||||||||| |||    
T  18537564 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccataataggtcattttttgaccgaactgggtaaacaaattttgtg 18537465  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
     ||||||| ||||||||||||| || ||| |||||||| ||||||||||||  |||||   ||| ||| | ||| |||||||||||||  ||||||||||    
T  18537464 cgttctctctttctttctctcgttgttttatacttttgtttgtgtttataa--cttccatacactttg-ttttgattgcttgattattacttgctccaca 18537368  T
Q  196 catcaagtattttattggtgtga 218  Q
    ||||||||||||||| |||||||    
T  18537367 catcaagtattttataggtgtga 18537345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 46 - 237
Target Start/End: Original strand, 9864000 - 9864194
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttgcttgtg- 143  Q
    ||||| |||||| |||| |||| | || |||||||| |||||||||||||||||||||||||| ||||||||||||| || ||||||||||||||||||     
T  9864000 ctctcccccccagactaagtcagtattggaccgaactgggtaaacaaatttcgtgtgttctctctttctttctctcgttgttttctacttttgcttgtga 9864099  T
Q  144 -tttataattcttcccacgttgatattggttgcttgattatttttgc-tccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
     ||||||| | ||||||| || || |||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||| || ||||||||||    
T  9864100 ttttataactgttcccac-tttattttggtttcttgattattttttcttccacacatcaagtattttattgatgtgatttttcaacgaattcacaa 9864194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 38890315 - 38890089
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||  | | | ||||||||||||| | | ||||||| |||| |||||||| ||||||||||||||||||    
T  38890315 tctcttttgtaaagttactcatcattatagtggaacagagggctgctctctccccaagattaggtcagttttggaccgaactgggtaaacaaatttcgtg 38890216  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    |||||||| |||| |||||||||||| |||||| ||||| |||||||||||||  |||||   ||| |||   ||||||||| |||||||  ||||||||    
T  38890215 tgttctctctttcttttctctcgctgttttctaattttgccttgtgtttataa--cttccatacactttg--tttggttgctagattattccttgctcca 38890120  T
Q  194 cacatcaagtattttattggtgtgatttttt 224  Q
    || ||||| ||||||||||||||||||||||    
T  38890119 catatcaaatattttattggtgtgatttttt 38890089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 47150983 - 47150758
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattata-agactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt 99  Q
    |||||||| ||||||| |||||||||||||||||  | | ||| || | ||||||| | ||||||||||| || |||||||  |||||||| |||||| |    
T  47150983 tctcttttctaaagttgctcatcattatagtggaacagataga-tgttatctcccctagactaggtcaatattggaccgaattgggtaaactaatttctt 47150885  T
Q  100 gtgttctctttttctttctctcgctgt-ttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacac-- 196  Q
    ||||||||| ||||||||||||| ||| ||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||  ||||||||||||      
T  47150884 gtgttctctctttctttctctcgttgtcttctacttttgtttgtgtttataattgttcccacattgattttggttgcttgatta-ctttgctccacacat 47150786  T
Q  197 --atcaagtattttattggtgtgatttt 222  Q
      ||||||||||||||| ||||||||||    
T  47150785 caatcaagtattttatttgtgtgatttt 47150758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 8756341 - 8756119
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||| ||||||||||||||    | |  |||||||||| ||| ||||||||  |||| || ||||| |||||||||||||| |||    
T  8756341 tctcttttgtaaagttactaatcattatagtggaacggatggttgctctctcctccagactaggtcggttttggagcgaactgggtaaacaaattttgtg 8756242  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatt-tttgctccacaca 197  Q
    |||||||| ||||||||||||| || ||| ||||||||||||||||||||| | |  ||||| ||| | |||||||||||||||||  ||||||||||||    
T  8756241 tgttctctctttctttctctcgttgttttttacttttgcttgtgtttataactgtcacccac-ttg-ttttggttgcttgattattacttgctccacaca 8756144  T
Q  198 tcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| |||||||||    
T  8756143 tcaagtattttattgatgtgatttt 8756119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 81; E-Value: 8e-38
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 12102331 - 12102550
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||||||||||||| |||| ||||||||  ||||||||||||||||     
T  12102331 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccatactaggtcagttttggaccgaactaggtaaacaaatttcgta 12102430  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    || ||||    |||||||||| ||| ||| |||||||||||||||||||||  |||||   ||| ||| | ||||||||| | |||||  ||||||||||    
T  12102431 tgctctc----tctttctctcactgttttttacttttgcttgtgtttataa--cttccatacactttg-ttttggttgctcggttattacttgctccaca 12102523  T
Q  196 catcaagtattttattggtgtgatttt 222  Q
    ||||||||| |||||||||||||||||    
T  12102524 catcaagtagtttattggtgtgatttt 12102550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 28453926 - 28454151
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    |  ||| |||||||||||| ||||||| | | || |||||||| ||||||||||||||||||    
T  28453926 tctcttttgtaaagttactcatcattatagtggaacggagaactactctctcccccagactaggttagtattggaccgaactgggtaaacaaatttcgtg 28454025  T
Q  101 tgttctctttttctttctctcgctg-----tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccac 194  Q
    |||||||| ||||||||| || | |     ||||||||||||||||||||||||||| |   |||| ||| | |||||| |||||||| ||||||| |||    
T  28454026 tgttctctctttctttctttctccggttgttttctacttttgcttgtgtttataattgtcatccactttg-ttttggtttcttgatta-ttttgcttcac 28454123  T
Q  195 acatcaagtattttattggtgtgatttt 222  Q
    |||||||||| | |||||||||||||||    
T  28454124 acatcaagtaatatattggtgtgatttt 28454151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 5e-36
Query Start/End: Original strand, 84 - 237
Target Start/End: Original strand, 9022611 - 9022765
Alignment:
Q  84 ggtaaacaaatttcgtgtgttctctttttctttctctcgctgttt--ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgat 180  Q
    ||||||||||||| ||||||||| | |||||||||||| ||||||  |||||||||||||||||||||||| || |||| || |||||||||||||||||    
T  9022611 ggtaaacaaattttgtgtgttctttctttctttctctcactgttttcctacttttgcttgtgtttataattgttacccatgtggatattggttgcttgat 9022710  T
Q  181 tatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| | |||||||||| ||||| ||||||||||||| ||||||| ||||||||||    
T  9022711 tatttgt-ctccacacatgaagtaatttattggtgtga-tttttaacgaattcacaa 9022765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 10113118 - 10113349
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    ||||||| |||||| |||||||||||||| |  |   ||||||||||||| | ||||||| | | || |||||||| ||||||| ||| ||| |||||||    
T  10113118 tttgtaatgttactaatcattatagtggaatggagagctgctctctccccaagactaggttagtattggaccgaactgggtaaaaaaaattcatgtgttc 10113217  T
Q  106 tctttttctttctctcgctgtt-tctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    | | ||||| ||||||  |||| ||||||||||||||||||||||| | |  ||||| ||| | ||||||||||||||||||| |||||||||||||| |    
T  10113218 tttctttctctctctcaatgttatctacttttgcttgtgtttataaatgtcacccactttgtt-ttggttgcttgattatttt-gctccacacatcaaat 10113315  T
Q  204 attttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||||| || || |||||||    
T  10113316 attttattggtgtgatttttcaacgacttcacaa 10113349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 236
Target Start/End: Complemental strand, 3982266 - 3982032
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt-cgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | |||||||||||| |||||||||||| | || ||||||||| ||||||||| ||| | |    
T  3982266 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctccctcatactaggtcactattggaccgaacaaggtaaacaatttttcat 3982167  T
Q  100 gtgttctctttttctttctctcgctgttt-cta-cttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacac 196  Q
    ||||||||| |  |||||||||||||||| ||| | |||| |||||||||||| | |  ||||| ||  | ||||||||||||||| |||| ||||||||    
T  3982166 gtgttctctct--ctttctctcgctgttttctatcgtttgtttgtgtttataactgtcacccactttttt-ttggttgcttgattaatttt-ctccacac 3982071  T
Q  197 atcaagtattttattggtgtgattttttaaggaattcaca 236  Q
    | ||||||||||||||||||||| |||||| |||||||||    
T  3982070 accaagtattttattggtgtgat-ttttaatgaattcaca 3982032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 15032638 - 15032410
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataaga-ctgctctctcccccatactaggtcaattttagaccgaac-agggtaaacaaatttcg 98  Q
    ||||||||||||||||||||||||||| ||||||    |||| ||||||||||||||| ||||||||| | || |||||||| |||||| ||||||||||    
T  15032638 tctcttttgtaaagttactcatcattacagtggaacg-aagagctgctctctcccccaaactaggtcagtattggaccgaactagggtatacaaatttcg 15032540  T
Q  99 tgtgttc--tctt--tttctttctctcgctg--tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttg 188  Q
    |||||||  ||||  ||||||||||||||||  |||||||||||| || |||||||||  |||||   ||| |||   |||||||||||||||||  |||    
T  15032539 tgtgttctttctttctttctttctctcgctgtttttctacttttgtttatgtttataa--cttccatacactttg--tttggttgcttgattattacttg 15032444  T
Q  189 ctccacacatcaagtattttattggtgtgatttt 222  Q
    |||| |||||||||||||||||||||||||||||    
T  15032443 ctccgcacatcaagtattttattggtgtgatttt 15032410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 19322937 - 19323161
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt- 99  Q
    ||||||||||||||||||||||||||||||||||    | |  |||||||||||||| ||||||||| |||| |||||||| || ||||||||||   |     
T  19322937 tctcttttgtaaagttactcatcattatagtggaacggagggatgctctctcccccagactaggtcagttttggaccgaactggataaacaaattcttta 19323036  T
Q  100 gtgttctctttttctttctctcgctgtttc-tacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccac 194  Q
    ||||||||| ||||||||||  | |||||  |||||||||| ||||||||||  |||||   ||| || || || ||||||||||||||  |||||||||    
T  19323037 gtgttctctctttctttctccaggtgttttatacttttgctcgtgtttataa--cttccatacacttt-attttagttgcttgattattacttgctccac 19323133  T
Q  195 acatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||||||||    
T  19323134 acatcaagtattttattggtgtgatttt 19323161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 2891535 - 2891778
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |  | | ||||||||||||||||| |||||  |||  || |||||||| |||| |||||||| |  |    
T  2891535 tctcttttgtaaggttactcatcattatagtgaaacagatgactgctctctcccccagactagtacaa-cttggaccgaactgggtcaacaaattctttt 2891633  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctc 191  Q
    ||||||||| || |||  ||||||| || ||||||||||| |||||||||||||||| ||||   ||| || || ||||||||||||||||| |||||||    
T  2891634 gtgttctctcttcctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacac-tttattttggttgcttgattattctttgctc 2891732  T
Q  192 cacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||| | ||||||||||||||||| |  ||||||||||    
T  2891733 cacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 2891778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 83 - 223
Target Start/End: Complemental strand, 52043569 - 52043427
Alignment:
Q  83 gggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttg-atattggttgcttga 179  Q
    |||| |||||||| |||| ||||||| |||||||||||||||| ||||||| ||||||||||||||||| | |  |||||||||  | ||||||||||||    
T  52043569 gggtgaacaaattccgtgagttctctctttctttctctcgctgttttctacgtttgcttgtgtttataactgtcacccacgttgttttttggttgcttga 52043470  T
Q  180 ttatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||| || |||||||||||||||||||||||||||||||||||||    
T  52043469 tta-ttctgctccacacatcaagtattttattggtgtgattttt 52043427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 10114602 - 10114796
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctgtt-tctacttttgcttg 141  Q
    ||||||||||||||| ||||||||| | || |||||||   |||||||||||||| |||||||||| ||||||||||||| |||| ||||| ||| ||||    
T  10114602 ctgctctctcccccagactaggtcagtattggaccgaattaggtaaacaaatttcatgtgttctctctttctttctctcgttgttatctaccttttcttg 10114701  T
Q  142 tgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| | |  ||||| ||| | |||||||||| | || ||||  |||||||||||| ||||||||||||||||||||| || ||| ||||||    
T  10114702 tgtttataactatcacccactttg-ttttggttgcttta-taattttattccacacatcaaatattttattggtgtgatttttcaacgaactcacaa 10114796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 36378536 - 36378761
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||| |||| |||||||||||||||||||||||    | | ||||||||||||||| |||||||||||||  |||||||| ||||||||||||| |  |    
T  36378536 tctctcttgtgaagttactcatcattatagtggaacggagggctgctctctcccccagactaggtcaatttg-gaccgaactgggtaaacaaattatttt 36378634  T
Q  100 gtgttctctttttctttctctcgctgttt-ctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||||| ||  ||||||  ||||||| |||||||| | |||||||||||||| || |   ||| ||| |  ||||||||||||||||  ||||||||    
T  36378635 gtgttctctcttcttttctcctgctgttttctacttttcgtttgtgtttataattgtttcatacactttgtt--tggttgcttgattattacttgctcca 36378732  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    || ||||||||||||||||||||||||||    
T  36378733 catatcaagtattttattggtgtgatttt 36378761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 40091504 - 40091275
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |  | | | |||||||||||||||||||||||||| ||| |||||||| |||| |||||||| |  |    
T  40091504 tctcttttgtaatgttactcatcat-atagtgaaacagagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 40091407  T
Q  100 gtgttctctttttctttctctc--gct-gtttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| ||  ||||||||  |||  ||||||||||| |||||||||||||||| ||||   ||| || || |||||||||||||||| ||||||||    
T  40091406 gtgttctctcttcttttctctcttgctattttctacttttggcttgtgtttataattattccatacac-tttattttggttgcttgattatcttttgctc 40091308  T
Q  192 cacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||| | |||||||||||| |||||    
T  40091307 cacacatcaagtttgttattggtgtgaattttt 40091275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 84 - 223
Target Start/End: Complemental strand, 29609500 - 29609361
Alignment:
Q  84 ggtaaacaaatttcgtgtgttctctttttctttctctcgctgtttc-tacttttgcttgtgtttataattcttc-ccacgttgatattggttgcttgatt 181  Q
    ||||||| ||||||||||||||||| ||||||||| ||| |||||| |||||||||||| || ||||||| ||  |||||||| | ||||||||||||||    
T  29609500 ggtaaaccaatttcgtgtgttctctctttctttctatcgttgtttcctacttttgcttgcgtatataattgttatccacgttgtt-ttggttgcttgatt 29609402  T
Q  182 atttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||   |||||| |||||||||||||||||||||||||||    
T  29609401 attttat-tccacatatcaagtattttattggtgtgattttt 29609361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36919673 - 36919445
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||| ||||||| |||||||| || | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||||| |  |    
T  36919673 tctcttttgtaacgttattcatcat-atagtggaatagatggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 36919576  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| |||||||||||| ||||||||||||||| ||||   ||| || || |||||||| |||||||   ||||||    
T  36919575 gtgttctctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacac-tttattttggttgcctgattatcccttgctc 36919477  T
Q  192 cacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| | |||||||||||||||||    
T  36919476 cacacatcaagtttgttattggtgtgattttt 36919445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 6 - 234
Target Start/End: Complemental strand, 3578756 - 3578537
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    ||||||||||||||||||||||||||||| |  |   ||| ||||||||||| |||||| || | ||||||||||| |||||||||||||||||||  ||    
T  3578756 tttgtaaagttactcatcattatagtggaatggagagctg-tctctcccccagactaggccagtattagaccgaactgggtaaacaaatttcgtgtactc 3578658  T
Q  106 tctttttctttctctcgctg-tttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
          ||||||||||| || |||||||||||  |||||||||||| | |  ||||||||| | |||||||||||||||  |||| | | |||||||||     
T  3578657 ------tctttctctcgttgttttctacttttatttgtgtttataactatcacccacgttg-ttttggttgcttgatta-atttgattcgcacatcaag- 3578567  T
Q  204 attttattggtgtgattttttaaggaattca 234  Q
     |||||||||||||||||||||| |||||||    
T  3578566 -ttttattggtgtgattttttaacgaattca 3578537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 22800951 - 22800721
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||  | | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  22800951 tctcttttgtaacgttactcatcat-atagtggaacagagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 22800854  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||||| |||||||||||||||| ||||    || ||| | |||||||||||| |||   ||||    
T  22800853 gtgttctctcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatatactttg-ttttggttgcttgactatcccttgc 22800755  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    ||| |||||||||| | |||||||||||||||||    
T  22800754 tccccacatcaagtttgttattggtgtgattttt 22800721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 221
Target Start/End: Complemental strand, 33415577 - 33415352
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||| |    | | |||||||||||| ||  ||||||||||||  |||||||| |||| || ||||| |  |    
T  33415577 tctcttttgtaaagttactcatcat-atagtgaaacggagggctgctctctccctcaggctaggtcaatttg-gaccgaactgggtcaataaattctttt 33415480  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||||| ||  ||||||||||||||| ||||||||| ||||||||||||||| | ||   ||| ||||| |||||||||||| |||   ||||||||    
T  33415479 gtgttctctcttcttttctctcgctgttttctacttttggcttgtgtttataattgtcccatacactttgattttggttgcttgactatcccttgctcca 33415380  T
Q  194 cacatcaagtattttattggtgtgattt 221  Q
    |||||||||| | ||||| |||||||||    
T  33415379 cacatcaagtttgttatttgtgtgattt 33415352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 36380595 - 36380818
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgt 101  Q
    ||||||||||||||||||||||||||||||||    |   ||||||||||||||| |||||||||| ||| || ||||| ||||||||||||| |  |||    
T  36380595 tcttttgtaaagttactcatcattatagtggaactgagtgctgctctctcccccagactaggtcaa-tttggagcgaactgggtaaacaaattcttttgt 36380693  T
Q  102 gttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    ||||||| ||  ||||||   ||| ||||||||||| |||||||||||||||| || |   ||| |||   ||| ||||||||| |||  || |||||||    
T  36380694 gttctctcttcttttctccttctgttttctacttttggcttgtgtttataattgtttcatacactttg--tttgattgcttgatcattacttactccaca 36380791  T
Q  196 catcaagtattttattggtgtgatttt 222  Q
    |||||| ||||||||||||||||||||    
T  36380792 catcaaatattttattggtgtgatttt 36380818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 43 - 222
Target Start/End: Original strand, 47563046 - 47563230
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gct 139  Q
    |||||||||||||   |||||||||||||  ||||||||  ||| |||||||| |  |||||||||| || ||||||||||||| ||||||||||| |||    
T  47563046 ctgctctctccccttgactaggtcaatttg-gaccgaacttggtcaacaaattcttttgtgttctctcttcctttctctcgctgttttctacttttggct 47563144  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgatttt 222  Q
    | ||||||||||| ||||   ||| ||| | |||||||||||||||||  |||||||||||||||||| | ||||||||||| ||||    
T  47563145 tatgtttataattgttccatacactttg-ttttggttgcttgattattccttgctccacacatcaagtttgttattggtgtggtttt 47563230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 1 - 219
Target Start/End: Original strand, 40637318 - 40637545
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  40637318 tctcttttgtaacgttactcatcat-atagtggaacggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 40637415  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttg-atattggttgcttgattatt-tttg 188  Q
    ||||||||| || | ||||||||||||    ||||||||||| ||||||| |||||||| ||||   ||| |||  | |||||||||||||||||  |||    
T  40637416 gtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttgttttttggttgcttgattattccttg 40637515  T
Q  189 ctccacacatcaagtattttattggtgtgat 219  Q
    ||||||||||||||| | |||||||||||||    
T  40637516 ctccacacatcaagt-tgttattggtgtgat 40637545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 172 - 237
Target Start/End: Original strand, 47078695 - 47078760
Alignment:
Q  172 ttgcttgattatttttgctccacacatcaagtattttattggtgtgatttttt-aaggaattcacaa 237  Q
    ||||||||||||||| ||||||||||| ||||||||||||||||||||||||| |||||||||||||    
T  47078695 ttgcttgattatttt-gctccacacattaagtattttattggtgtgattttttcaaggaattcacaa 47078760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 38928225 - 38928040
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctgttt-ctacttttg-ct 139  Q
    ||||||||||||||| |||||||||||||  |||||||| |||| |||||||| |  |||||||||| ||  ||| ||||| ||||| ||||||||| ||    
T  38928225 ctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttcttttatctcgttgttttctacttttggct 38928127  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||| |||||| | ||||   ||| ||| | ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  38928126 tgtgattataactgttccatacactttgtt-ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 38928040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17662334 - 17662108
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  17662334 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 17662237  T
Q  100 gtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
    |||||||| | |||||| ||||||||    ||||||||||| || |||| |||||||| ||||   ||| ||| | ||| ||||||||||||   |||||    
T  17662236 gtgttctc-tcttctttttctcgctgttgttttctacttttggcatgtgattataattgttccatacactttggt-ttgattgcttgattatcccttgct 17662139  T
Q  191 ccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||| | ||||||||||||||||    
T  17662138 ccacacatcaagt-tgttattggtgtgatttt 17662108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 22802823 - 22802579
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | |  | |||||||||||| ||||||||||||| | |||||||  ||| |||||||| |  |    
T  22802823 tctcttttgtaatgttactcatcat-atagtggaacggagggtttctctctcccccagactaggtcaatttga-accgaactaggtcaacaaattctttt 22802726  T
Q  100 gtgttctctttt-tctttctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgc 189  Q
    ||||||| | || | ||||||||||||||    |||||||||| ||||||||||||||| ||||   ||| ||| | ||||||||||||||||   ||||    
T  22802725 gtgttctatcttctttttctctcgctgttgctttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattatcccttgc 22802627  T
Q  190 tccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  22802626 tccacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 22802579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 23001442 - 23001336
Alignment:
Q  116 tctctcgctgtttctacttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggt 214  Q
    ||||||| |||||  |||||||||||||||||||||| |  |||||||| |||||||||||||| |||  |||||||||||||||| || |||| |||||    
T  23001442 tctctcgttgttttaacttttgcttgtgtttataattgtcacccacgttaatattggttgcttggtta-atttgctccacacatcacgt-ttttgttggt 23001345  T
Q  215 gtgattttt 223  Q
    |||||||||    
T  23001344 gtgattttt 23001336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 41997736 - 41997959
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||| |||||| |    | | | ||||||||||| | ||||||| |||||  |||||||| || |||||||||||| |     
T  41997736 tctcttttgtaaagttactcatcatcatagtgaaacggagggccgctctctcccc-agactaggttaatttg-gaccgaactggataaacaaatttcata 41997833  T
Q  101 tgttctctttttcttt-ctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
     ||||||| ||||||| ||||||||| |||||||||||| ||||| ||||||  |||||   ||| ||| | ||||||||||||||||   || ||||||    
T  41997834 agttctctctttctttgctctcgctgttttctacttttgtttgtgattataa--cttccatacactttg-ttttggttgcttgattatcactttctccac 41997930  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||| | ||||||||||| |||||    
T  41997931 acatcaagtttattattggtgtgtttttt 41997959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 4215550 - 4215701
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  4215550 tctcttttgtaacgttactcatcat-atagtggaacggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 4215647  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataatt 152  Q
    ||||||||||| | |||||||||| | ||||||||||| ||||||| ||||||||    
T  4215648 gtgttctctttct-tttctctcgcagttttctacttttggcttgtgattataatt 4215701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 6765088 - 6765180
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  6765088 tctcttttgtaacgttactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 6765180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 24348462 - 24348554
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | |||||||||||||||||||||||||| ||| |||||||| |||| ||||||||    
T  24348462 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaatt 24348554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36921582 - 36921354
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| ||||| | |||||  |||||||| |||| |||||||| |  |    
T  36921582 tctcttttgtaacgttactcatcat-atagtggaacggatggctgctctctcccccagactagttaaatttg-gaccgaactgggtcaacaaattctttt 36921485  T
Q  100 gtgttctctttttctttctctc--gctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||||||| ||  ||||||||  ||||||| ||||||||| ||||||||||||||| || |   ||| || || |||||||| |||||||   ||||||    
T  36921484 gtgttctctcttcttttctctcttgctgttttctacttttggcttgtgtttataattgtttcatacacttt-attttggttgcctgattatcccttgctc 36921386  T
Q  192 cacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| | |||||||||||||||||    
T  36921385 cacacatcaagtttgttattggtgtgattttt 36921354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 16453553 - 16453794
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |  | | |  |||||||||||||| |||||||||||||  |||||||| | |  || ||||| |  |    
T  16453553 tctcttttgtaaggttactcatcattatagtgaaacagatggttgctctctcccccagactaggtcaatttg-gaccgaactgcgccaaaaaattctttt 16453651  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||||| ||  |||||||| |||||| ||||||||| |||||| |||||| | || |   ||| ||| | |||||||| |||||||   ||||||||    
T  16453652 gtgttctctcttcttttctctcactgttttctacttttggcttgtgattataactgtttcatacactttgtt-ttggttgcctgattatcacttgctcca 16453750  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | ||||||||||||||||| |  ||||||||||    
T  16453751 cacatcaagtttgttattggtgtgatttttcatcgaattcacaa 16453794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 24879275 - 24879395
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttc-tttctctcgctg----tttctactttt 136  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| || |||||||||| || | ||||||||||||    |||||||||||    
T  24879275 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctactttt 24879373  T
Q  137 -gcttgtgtttataattcttcc 157  Q
     |||||||||||||||| ||||    
T  24879374 ggcttgtgtttataattgttcc 24879395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 43 - 157
Target Start/End: Original strand, 24880737 - 24880857
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttc-tttctctcgctg----tttctactttt 136  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| || |||||||||| || | ||||||||||||    |||||||||||    
T  24880737 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctcttgtgttctctcttccttttctctcgctgttgttttctactttt 24880835  T
Q  137 -gcttgtgtttataattcttcc 157  Q
     |||||||||||||||| ||||    
T  24880836 ggcttgtgtttataattgttcc 24880857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 108
Target Start/End: Original strand, 16455485 - 16455590
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| ||||||| ||||||||||| |    | ||||||||||||||||| |||||||||| ||| |||||||| |||| |||||| ||| ||    
T  16455485 tctcttttgtaaggttactcgtcattatagtgaaacggatgactgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaa-ttcttg 16455582  T
Q  101 tgttctct 108  Q
    ||||||||    
T  16455583 tgttctct 16455590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 5635565 - 5635473
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  5635565 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 5635473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 7941567 - 7941659
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  7941567 tctcttttgtaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 7941659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 8631508 - 8631416
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  8631508 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 8631416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 14789473 - 14789289
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-----tttctacttttg-ct 139  Q
    |||||||||||| |||||||||||||  |||||||| |||| |||||||| | ||||||||  | |||||| |||| ||      |||||||||||| ||    
T  14789473 ctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaatt-cttgtgttcttctcttctttttctctctagttgttttctacttttggct 14789376  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| || |   ||| ||| | ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  14789375 tgtgtttataattgtttcatacactttgtt-ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 14789289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 150
Target Start/End: Original strand, 30136793 - 30136945
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||| |||||||||||||| |  | | | ||||||||||| | |||||||||||| ||| |||||||  || |||||||||| |  |    
T  30136793 tctcttttgtaaagttaatcatcattatagtgaaacagatggctgctctctcctcaatactaggtcaa-tttggaccgaattggataaacaaattctttt 30136891  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctactttt-gcttgtgtttataa 150  Q
    ||||||||| |||| ||||||| | || ||||||||||| | ||||||||||||    
T  30136892 gtgttctctctttcttttctcttgttgttttctacttttggtttgtgtttataa 30136945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 171 - 223
Target Start/End: Complemental strand, 5516154 - 5516103
Alignment:
Q  171 gttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  5516154 gttgcttgattaattta-ctccacacatcaagtattttattggtgtgattttt 5516103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 4885007 - 4885073
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    ||||||||||||||| |||||||||   ||||||||||| ||||||||||| ||| ||||||||||||    
T  4885007 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttt 4885073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 5664651 - 5664706
Alignment:
Q  168 ttggttgcttgattatttt-tgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||   | ||||||||||||||||||||||||||||||||||    
T  5664651 ttggttgcttgattattaccttctccacacatcaagtattttattggtgtgatttt 5664706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 9176558 - 9176469
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||||| || ||||||||||    
T  9176558 tttgtaacggtactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaacagagtcaacaaatttc 9176469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Complemental strand, 22132476 - 22132387
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||| |||||||||||| ||| |||||||| |||| ||||||||||    
T  22132476 tttgtaacggtactcatcat-atagtggattggagggctgctctctcccctatactaggtcaa-tttggaccgaactgggtcaacaaatttc 22132387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 24889040 - 24889270
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||| ||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  24889040 tctcttttgtaacgttacttatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 24889137  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgc 189  Q
    ||||| ||| || | ||||||||||||    ||||||||||| ||||||| |||||||| ||||   ||| ||| | ||||||| | |||||||  ||||    
T  24889138 gtgttatctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg-ttttggttgttagattattccttgc 24889236  T
Q  190 tccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||| | ||||||||||||| ||||    
T  24889237 tccacacatcaagt-tgttattggtgtgatatttt 24889270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 5198664 - 5198733
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||||||    
T  5198664 tctcttttgtaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaattt 5198733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 19 - 224
Target Start/End: Original strand, 6133098 - 6133310
Alignment:
Q  19 tcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt---tcgtgtgttctctttttctt 115  Q
    ||||||||||||||||    | |||||||||||| |||| |||||||||||||  || ||||  |||| ||||||||   | ||||  |||||| || |     
T  6133098 tcatcattatagtggaacggatgactgctctctcacccagactaggtcaatttg-gatcgaattgggtcaacaaattcttttgtgttctctcttcttttc 6133196  T
Q  116 tctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtatttta 209  Q
    ||||||| ||||| ||||||||| ||||||||||||||| || |   ||| ||| | | |||||||||||||||  |||||||||||||||||| | |||    
T  6133197 tctctcgttgttttctacttttgacttgtgtttataattgtttcatacactttgtt-tcggttgcttgattattccttgctccacacatcaagtttgtta 6133295  T
Q  210 ttggtgtgatttttt 224  Q
    ||||||| |||||||    
T  6133296 ttggtgtaatttttt 6133310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 37313155 - 37313085
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||| ||||||| |||| ||||||||    
T  37313155 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctttcccccagactatgtcaattt 37313085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Original strand, 9022554 - 9022607
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccata 59  Q
    |||||||||||||||||||||||||||||  | | | |||||||||||||||||    
T  9022554 tttgtaaagttactcatcattatagtggaacaaagggctgctctctcccccata 9022607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 11853681 - 11853742
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||    
T  11853681 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 11853742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 223
Target Start/End: Complemental strand, 14787474 - 14787290
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-----tttctacttttg-ct 139  Q
    |||||||||||| |||||||||||||  |||| ||| |||| |||||||| | ||||||||  | |||||| |||| ||      |||||||||||| ||    
T  14787474 ctctctcccccagactaggtcaatttg-gaccaaactgggtcaacaaatt-cttgtgttcttctcttctttttctctctagttgttttctacttttggct 14787377  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| || |   ||| ||| | ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  14787376 tgtgtttataattgtttcatacactttgtt-ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 14787290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 26558009 - 26558077
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| ||| |||||||||||||| || ||||||  |||||||||| || ||||||||||    
T  26558009 ttggttgcttgattaattt-gctccacacatcaaatactttattcatgtgatttttcaatgaattcacaa 26558077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 38409453 - 38409540
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| |||||||||   | | |||||||||||||||||||||||||| ||| |||||||| |||| ||||||||    
T  38409453 tttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaatt 38409540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 6765222 - 6765333
Alignment:
Q  126 tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||| |||||| ||||||||||    ||| ||| | ||||||||||||||||   || ||||||||||||||| | |||||||||||||||||     
T  6765222 tttctactttggcttgtatttataattccatacactttgtt-ttggttgcttgattatcccttactccacacatcaagtttgttattggtgtgatttttc 6765320  T
Q  225 aaggaattcacaa 237  Q
    |  ||||||||||    
T  6765321 atcgaattcacaa 6765333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 8529400 - 8529452
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  8529400 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 8529452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 11435376 - 11435431
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||    
T  11435376 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttt 11435431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 13547400 - 13547467
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||||||||| |||||| | |  | | ||||||||||||||| |||||||||||||    
T  13547400 tcttttgtaaagttactcatcat-atagtgaaatggagggctgctctctcccccagactaggtcaattt 13547467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 224
Target Start/End: Complemental strand, 18409394 - 18409208
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttcttt----ctctcgctgttt-ctacttttg- 137  Q
    ||||||||||| || |||||||||||||  ||  |||| ||||||||||||||||||| || | ||||| |||    |||||||| ||| |||||||||     
T  18409394 tgctctctccctcagactaggtcaatttg-gattgaactgggtaaacaaatttcgtgttttttttttttttttttttctctcgctattttctacttttgt 18409296  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||| ||||||  |||||   ||| ||| | |||||||||||| |||   |||||||||||||||||| | ||||||||||||||||||    
T  18409295 cttgtgattataa--cttccatacactttgtt-ttggttgcttgactatcacttgctccacacatcaagtttattattggtgtgatttttt 18409208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 18587099 - 18587151
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  18587099 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 18587151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 27499464 - 27499520
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||| |||||  |||||||||||||||||| | |||||||||||||||||    
T  27499464 ttggttgcttggttattcattgctccacacatcaagtttgttattggtgtgattttt 27499520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 37089284 - 37089228
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  37089284 ttggttgcttgattatccattgctccacacatcaagtttgttattggtgtgattttt 37089228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 53405554 - 53405610
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  53405554 ttggttgcttgattatcccttgctccacacatcaagtttattattggtgtgattttt 53405610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 4556109 - 4556043
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    ||||||||||||||| |||||||||   ||| ||||||| ||||||||||| ||| ||||||||||||    
T  4556109 ctgctctctcccccagactaggtcatcattaaaccgaactgggtaaacaaa-ttcttgtgttctcttt 4556043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 12395893 - 12395780
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa-tttcgtgtgttctctttttctttc--tctcgctgt-ttctactttt-g 137  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||| |||||| | |  |||||||||| || |||||  ||||| ||| |||||||||| |    
T  12395893 ctgctctctcccccagactaggtcaa-tttggaccgaacagggtcaacaaactcttttgtgttctctcttcctttctgtctcgttgtcttctacttttgg 12395795  T
Q  138 cttgtgtttataatt 152  Q
    | |||||||||||||    
T  12395794 catgtgtttataatt 12395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 12400855 - 12400742
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa-tttcgtgtgttctctttttctttc--tctcgctgt-ttctactttt-g 137  Q
    ||||||||||||||| |||||||||| ||| ||||||||||||| |||||| | |  |||||||||| || |||||  ||||| ||| |||||||||| |    
T  12400855 ctgctctctcccccagactaggtcaa-tttggaccgaacagggtcaacaaactcttttgtgttctctcttcctttctgtctcgttgtcttctacttttgg 12400757  T
Q  138 cttgtgtttataatt 152  Q
    | |||||||||||||    
T  12400756 catgtgtttataatt 12400742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 15831274 - 15831337
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| || ||||||||| || ||||||||    
T  15831274 ctgctctctcccccagactaggtcatcattagaccgaactggataaacaaatatcttgtgttct 15831337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 186 - 237
Target Start/End: Original strand, 16455661 - 16455712
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  16455661 ttgctccacacatcaagtttgttattggtgtgatttttcatcgaattcacaa 16455712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 110
Target Start/End: Complemental strand, 16688989 - 16688923
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    |||||||||||| || |||||||||   ||||||||||| ||||||||||| ||| ||||||||||||    
T  16688989 ctgctctctcccacaaactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttt 16688923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 31849510 - 31849456
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  31849510 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 31849456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 44599750 - 44599696
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||| |||||  |||||||||||||||||| | |||||||||||||||||    
T  44599750 ttggttgcttaattatccttgctccacacatcaagt-tgttattggtgtgattttt 44599696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Complemental strand, 3824527 - 3824465
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||| |||||||||||| |||   |||||||||||||||||| | |||||||||||||||||    
T  3824527 ttgattttggttgcttgactatcccttgctccacacatcaagtttgttattggtgtgattttt 3824465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 186 - 224
Target Start/End: Complemental strand, 18311269 - 18311231
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  18311269 ttgctccacacatcaagtttattattggtgtgatttttt 18311231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 47868645 - 47868714
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| | |||||||||| ||||||||    | | |||||||||||||||||||||||||||||    
T  47868645 tctcttttgtaacgatactcatcat-atagtggaacggatggctgctctctcccccatactaggtcaattt 47868714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 2484957 - 2484893
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||||||    
T  2484957 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaattt 2484893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 71
Target Start/End: Complemental strand, 11008652 - 11008588
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||||||    
T  11008652 tttgtaatggtactcatcat-atagtggattggagggctgctctctcccccagactaggtcaattt 11008588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 11435203 - 11435290
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||| | |||||||||| ||| |||||||| |||| ||||||||    
T  11435203 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaatt 11435290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 11437611 - 11437698
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||| | |||||||||| ||| |||||||| |||| ||||||||    
T  11437611 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaatt 11437698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 22044475 - 22044388
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | |||||||||||| || |||||||||| ||| |||||||| |||| ||||||||    
T  22044475 tttgtaacgttactcatcat-atagtggatcggagggctgctctctccctcagactaggtcaa-tttggaccgaactgggtcaacaaatt 22044388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 22046770 - 22046683
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | |||||||||||| || |||||||||| ||| |||||||| |||| ||||||||    
T  22046770 tttgtaacgttactcatcat-atagtggatcggagggctgctctctccctcagactaggtcaa-tttggaccgaactgggtcaacaaatt 22046683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 31849683 - 31849596
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| |||||||||   | | ||||||||||||||| ||||||||||||| | ||||||| |||| ||||||||    
T  31849683 tttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaatttga-accgaactgggtcaacaaatt 31849596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 37089456 - 37089369
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  37089456 tttgtaacgttactcatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 37089369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Complemental strand, 37312977 - 37312940
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||| | |||||||||||||||||    
T  37312977 ttgctccacacatcaagtttattattggtgtgattttt 37312940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 40999039 - 40999006
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||| ||||||||||    
T  40999039 tctcttttgtaaagttactcatcgttatagtgga 40999006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 126 - 224
Target Start/End: Complemental strand, 52942448 - 52942345
Alignment:
Q  126 tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatt 220  Q
    |||||||||||| ||||||||||||||| ||||   ||| ||||| ||| |||| ||||||| | || ||||||||||||| | | ||||| ||||||||    
T  52942448 tttctacttttggcttgtgtttataattgttccatacactttgattttgattgcctgattatctcttactccacacatcaaatttgttatttgtgtgatt 52942349  T
Q  221 tttt 224  Q
    ||||    
T  52942348 tttt 52942345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 54928738 - 54928705
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||||||||||| |||||||||    
T  54928738 tctcttttgtaaagttactcatcactatagtgga 54928705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Original strand, 55822397 - 55822457
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||| |||||||||||   ||||||||||| |||||||||||| || ||||||    
T  55822397 ctgctctctcccc-atactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 55822457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #97
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Original strand, 14633741 - 14633792
Alignment:
Q  170 ggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattt 221  Q
    |||||||||||||| | |||||||||||||||||| | |||||||||||||||    
T  14633741 ggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattt 14633792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #98
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 18709237 - 18709159
Alignment:
Q  17 actcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||||| ||||||||||  | ||||||||||||||||| |||||||| |  || |||||||| |||| ||||||||||    
T  18709237 actcatcat-atagtggattggaggactgctctctcccccagactaggtc-agattggaccgaactgggtcaacaaatttc 18709159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #99
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 18847573 - 18847628
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  18847573 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 18847628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #100
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 22046598 - 22046543
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  22046598 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 22046543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #101
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 36769612 - 36769664
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| || ||||||||||    
T  36769612 ctgctctctcccccagactaggtcatcattagaccgaactggataaacaaatt 36769664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #102
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 235
Target Start/End: Original strand, 54906985 - 54907049
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcac 235  Q
    ||||||||||||||| ||| |||||||||||||||  |||||||| ||| | ||||||| ||||||||    
T  54906985 ttggttgcttgattaattt-gctccacacatcaag--ttttattgatgtaactttttaacgaattcac 54907049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 122; Significance: 3e-62; HSPs: 96)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 122; E-Value: 3e-62
Query Start/End: Original strand, 3 - 222
Target Start/End: Original strand, 53597408 - 53597628
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtg 102  Q
    |||||||||||||||||||||||||||||||| |  | |  ||||||||||| || ||||||||| | || |||||||  |||||| | |||||||||||    
T  53597408 tcttttgtaaagttactcatcattatagtggaatggagggttgctctctcccacaaactaggtcagtattggaccgaattgggtaagctaatttcgtgtg 53597507  T
Q  103 ttctctt-tttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatca 200  Q
    ||||||  ||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  53597508 ttctctcctttctttctctcgttgttttctatttttgcttgtgtttataattcttcccacgttgatattggttgcttgatta-ttttgctccacacataa 53597606  T
Q  201 agtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||    
T  53597607 agtattttattggtgtgatttt 53597628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 91; E-Value: 8e-44
Query Start/End: Original strand, 3 - 237
Target Start/End: Original strand, 27420822 - 27421053
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtg 102  Q
    ||||||||||||||||||||||||||| ||||  |||    |||||||||||||||| ||||||| |||| ||||||||  |||||||||||| | ||||    
T  27420822 tcttttgtaaagttactcatcattataatggaacatagagttgctctctcccccatagtaggtcagttttggaccgaactaggtaaacaaattccatgtg 27420921  T
Q  103 ttctctttttctttctctcgctgtttc-tacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatca 200  Q
    |||||| |  |||| ||||  |||||  ||||||||||||||||||||||| || ||||| ||||||||||||||||||||| ||| |||| ||||||||    
T  27420922 ttctctct--ctttttctcattgttttatacttttgcttgtgtttataattgttacccacattgatattggttgcttgattaattt-gctcaacacatca 27421018  T
Q  201 agtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||  |||||||||||||||||| || ||||||||||    
T  27421019 agt--tttattggtgtgatttttcaatgaattcacaa 27421053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 5 - 222
Target Start/End: Complemental strand, 561860 - 561640
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctccc-ccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgt 103  Q
    ||||||||||||||||||||||||||||||    | | |||||||||||| ||| ||||||||| |||| |||||||| |||||||||||||||  ||||    
T  561860 ttttgtaaagttactcatcattatagtggaacgaagggctgctctctccctccagactaggtcagttttggaccgaaccgggtaaacaaatttcacgtgt 561761  T
Q  104 tctctttttct-ttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacaca 197  Q
    ||||| ||||| |||||||| || |||||||||||||||||||||||||  |||||   ||| |||   |||||||||||||||||  || |||||||||    
T  561760 tctctctttctcttctctcgatgttttctacttttgcttgtgtttataa--cttccatacactttg--tttggttgcttgattattacttactccacaca 561665  T
Q  198 tcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||||||||||    
T  561664 tcaagtattttattggtgtgatttt 561640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 6 - 237
Target Start/End: Complemental strand, 36871384 - 36871151
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||||||| ||||||||||||||||    | | ||||||||||||||| ||||||||| | || |||||||| |||||||| ||||||||||||||    
T  36871384 tttgtaaagttaatcatcattatagtggaacggagggctgctctctcccccagactaggtcagtattggaccgaactgggtaaacgaatttcgtgtgttc 36871285  T
Q  106 tct-ttttctttctctcgctg-tttcta-cttttgcttgtgtttataattct-tcccacgttgatattggttgcttgattatttttgctccacacatcaa 201  Q
    ||| |||  |||||||||||| |||||| ||||||||||||||||||| | |  ||||| ||| | ||||||||||||||||| ||||||||||||||||    
T  36871284 tctctttattttctctcgctgttttctatcttttgcttgtgtttataactgtcacccac-ttg-ttttggttgcttgattattcttgctccacacatcaa 36871187  T
Q  202 gtattttattggtgtgatttttt-aaggaattcacaa 237  Q
    ||| ||||| ||||||||||||| || ||||||||||    
T  36871186 gta-tttatcggtgtgattttttcaacgaattcacaa 36871151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 6 - 224
Target Start/End: Original strand, 7768745 - 7768962
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    ||||||||||||||||| |||||||||||    | |  | ||| |||||||||||||||||| | || || ||||  ||||||| ||| ||||||| |||    
T  7768745 tttgtaaagttactcattattatagtggaacgaagggttactccctcccccatactaggtcagtattggatcgaattgggtaaaaaaaattcgtgtcttc 7768844  T
Q  106 tctttttctttctctcgctg-tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagt 203  Q
    ||| ||||||||||||| || |||| |||||||||||||||||||||| || ||||| |||||||||||||||||||| |||||||||||||||||||      
T  7768845 tctctttctttctctcgttgttttccacttttgcttgtgtttataattgttacccacattgatattggttgcttgatt-tttttgctccacacatcaa-- 7768941  T
Q  204 attttattggtgtgatttttt 224  Q
    |||||||| |||| |||||||    
T  7768942 attttattagtgtaatttttt 7768962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 43 - 187
Target Start/End: Original strand, 1674175 - 1674322
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttcttt-ctctcgctgttt-ctacttttg-ct 139  Q
    ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||| |||| |||||| ||||||| |||||| ||||| ||| ||||  ||    
T  1674175 ctgctctctccaccagactaggtcagtattagaccgaactgggtaaacaaattttgtgtattctctctttcttttctctcgatgttttctaattttttct 1674274  T
Q  140 tgtgtttataattcttcccacgttgatattggttgcttgattattttt 187  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||    
T  1674275 tgtgtttataattgttcccacgttgatattgattgcttgattattttt 1674322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 31151513 - 31151752
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||  ||||||||||    | | ||||||||||||||| ||||||||| |||| | | |||| ||||||||||||| || |    
T  31151513 tctcttttgtaaagttactcattgttatagtggaacggagggctgctctctcccccagactaggtcagttttgggctgaactgggtaaacaaattctcat 31151612  T
Q  100 gtgttctctttttctttctctcgctg--tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    ||||||||| ||  ||||||||||||  |||||||| || |||||||||||||  |||||   ||| ||| | |||||||||||||||||  ||||||||    
T  31151613 gtgttctctcttcttttctctcgctgtttttctactcttacttgtgtttataa--cttccatacactttg-ttttggttgcttgattattacttgctcca 31151709  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||| |||||||||||||||||| |  ||||||||||    
T  31151710 cacatcaagta-tttattggtgtgatttttcatcgaattcacaa 31151752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 25634057 - 25634278
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| |    | | ||||||||||| ||| |||||| ||||||   |||||||  ||||||||||||| |||    
T  25634057 tctcttttgtaaagttactcatcattatagtgaaacgaatggctgctctctccaccagactaggacaatttgc-accgaactaggtaaacaaattttgtg 25634155  T
Q  101 tgttctctt-tttctttctctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatt-tttgctccacac 196  Q
    ||||||||  |||||| |||| | ||||| |||||||||||||||||||||||| || ||||| ||| |||||||||||||||||||  ||||||| |||    
T  25634156 tgttctctcctttcttactcttgttgttttctacttttgcttgtgtttataattgttacccac-ttg-tattggttgcttgattattacttgctccccac 25634253  T
Q  197 atcaagtattttattggtgtgatttt 222  Q
    || ||||| |||||||||||||||||    
T  25634254 attaagta-tttattggtgtgatttt 25634278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 3 - 119
Target Start/End: Original strand, 24181552 - 24181668
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtg 102  Q
    ||||||||||||||||||||||||||||||||    | ||||||||||||| ||| ||||||||| |||| |||||||  ||||||||||||||||||||    
T  24181552 tcttttgtaaagttactcatcattatagtggaacggatgactgctctctcctccaaactaggtcagttttggaccgaattgggtaaacaaatttcgtgtg 24181651  T
Q  103 ttctctttttctttctc 119  Q
    |||||| ||||||||||    
T  24181652 ttctctctttctttctc 24181668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 14634529 - 14634307
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt-cgt 99  Q
    ||||||||||||||||||||||||| ||||||||    | | ||  ||||  |  || ||||||| | | |||||||||||  ||||||||||||| |||    
T  14634529 tctcttttgtaaagttactcatcataatagtggaacggatggctaatctcatcagcagactaggttagtattagaccgaactaggtaaacaaattttcgt 14634430  T
Q  100 gtgttctctttttctttctctcgctgtttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacat 198  Q
     | |||||| ||||||||||||||  ||||||||||| | ||||||||| ||| |  ||||| |||||||||||||||| |||| ||| | |||||||||    
T  14634429 attttctctctttctttctctcgcattttctactttttcctgtgtttattattttcacccactttgatattggttgctttattaattt-gttccacacat 14634331  T
Q  199 caagtattttattggtgtgatttt 222  Q
    ||||||||||||||||||||||||    
T  14634330 caagtattttattggtgtgatttt 14634307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 5 - 237
Target Start/End: Original strand, 6484534 - 6484771
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgt 103  Q
    ||||||||||||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  |||||||| |||| |||||||| |  |||||    
T  6484534 ttttgtaaagttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgt 6484631  T
Q  104 tctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacaca 197  Q
    ||||| ||  | ||||||||||||| ||||||||| ||||||||||||||| ||||   ||| ||||| |||||||||| ||||||  ||||||||||||    
T  6484632 tctctcttattctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcttaattattccttgctccacaca 6484731  T
Q  198 tcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||| | | ||||| |||||||||||||  ||||||||||    
T  6484732 tcaaatttgttattagtgtgattttttattgaattcacaa 6484771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 5 - 222
Target Start/End: Original strand, 25635555 - 25635772
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    |||||||||||||||||||||||| ||| |  | | |  ||||||||||||    ||||| ||||||  |||| ||| | ||||||||||||||||||||    
T  25635555 ttttgtaaagttactcatcattatggtgaaacagagggttgctctctcccctcggctaggccaatttg-gaccaaactgcgtaaacaaatttcgtgtgtt 25635653  T
Q  105 ctctt-tttctttctctcgctg-tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatt-tttgctccacacatca 200  Q
    ||||| |||||||| |||| || ||||||||||||||||||||||||| | || ||||| ||| |||||||||||||||||||  |||||||||||||||    
T  25635654 ctcttctttctttcactcgttgttttctacttttgcttgtgtttataactgttacccac-ttg-tattggttgcttgattattacttgctccacacatca 25635751  T
Q  201 agtattttattggtgtgatttt 222  Q
    |||| |||||| ||||||||||    
T  25635752 agta-tttattagtgtgatttt 25635772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 43421502 - 43421276
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |  | | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  43421502 tctcttttgtaacgttactcatcat-atagtgaaacagatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 43421405  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| ||  |||||||||||| ||| ||||||| |||||||||||||||| ||||   ||| ||| | |||||||||||| ||| | ||||||||    
T  43421404 gtgttctctcttcttttctctcgctgttttatacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatatcttgctcca 43421306  T
Q  194 cacatcaagtattttattggtgtgattttt 223  Q
    |||||||| | | |||||||||||||||||    
T  43421305 cacatcaactttgttattggtgtgattttt 43421276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 3314854 - 3315078
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||| ||| |||||||||||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  3314854 tctcttttgtaaaattattcatcattatagtgaaacggagggctgctctctcccccaaactaggtcaa-tttggaccgaactgggtcaacaaattctttt 3314952  T
Q  100 gtgttctctttttctt--tctctcgctg-tttctac-ttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  |||||||||| ||||||| ||| |||||||||||||||| ||||   ||| ||| | ||||||||||||||||   ||||||    
T  3314953 gtgttctctcttcctttctctctcgctgttttctacgtttggcttgtgtttataattgttccatacactttgcttttggttgcttgattatcccttgctc 3315052  T
Q  192 cacacatcaagtattttattggtgtg 217  Q
    |||||||||||| | |||||||||||    
T  3315053 cacacatcaagtttattattggtgtg 3315078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 6 - 240
Target Start/End: Complemental strand, 1620544 - 1620310
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    |||||||| ||||||||||||||||||||    | | ||||||||||||| | ||||||||| | || |||| |||  ||| |||||| || ||||||||    
T  1620544 tttgtaaacttactcatcattatagtggaacggagggctgctctctcccctagactaggtcagtattggaccaaactaggtgaacaaactttgtgtgttc 1620445  T
Q  106 tctttttctttc-tctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaag 202  Q
    |||  ||||||  |||||  |||| |||||||||||||||||||||| | |  ||||| ||| | ||||||||||||||| |||| ||||||| ||||||    
T  1620444 tctcattcttttatctcgtggttttctacttttgcttgtgtttataactgtcacccac-ttgtt-ttggttgcttgattaatttt-ctccacatatcaag 1620348  T
Q  203 tattttattggtgtgatt-ttttaaggaattcacaataa 240  Q
    | |||||||||||||||| |||||| |||||||||||||    
T  1620347 t-ttttattggtgtgatttttttaacgaattcacaataa 1620310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 27635745 - 27635515
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  |||||||| |||| |||||||| |  |    
T  27635745 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaatttg-gaccgaactgggtcaacaaattctttt 27635648  T
Q  100 gtgttctctttt----tcttt-ctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttg 188  Q
    ||||||||| ||    ||||| |||||||||||| ||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||||||||  |||    
T  27635647 gtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattattccttg 27635549  T
Q  189 ctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| | ||||||||||||||||    
T  27635548 ctccacacatcaagtttgttattggtgtgatttt 27635515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 28761516 - 28761422
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||||||||||||||||||||||| |    | ||||||||||||||||| |||||||||||||| || ||||| |||||||||||||    
T  28761516 tctcttttgtaaagttactcatcattatagtgaaacggaggactgctctctcccccagactaggtcaattttggatcgaactgggtaaacaaatt 28761422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 1313579 - 1313806
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  1313579 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 1313676  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| ||  ||||||||| || |||||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||| |||   ||||||||    
T  1313677 gtgttctctcttcttttctctcgttgttttctacttttgacttgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctcca 1313775  T
Q  194 cacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||| | |||||||||||| |||||    
T  1313776 cacatcaagtttgttattggtgtgagttttt 1313806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 41 - 239
Target Start/End: Complemental strand, 5926812 - 5926609
Alignment:
Q  41 gactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgc--tgttt-ctacttttg 137  Q
    |||||||||||||| || |||||||||||||  |||||||| |||| ||||||||   ||||||||||||| ||||||||| |  ||||| |||||||||    
T  5926812 gactgctctctcccgcagactaggtcaatttg-gaccgaactgggtcaacaaattctttgtgttctcttttcctttctctctcgttgttttctacttttg 5926714  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgattttttaaggaattc 233  Q
    ||||||||||||||| ||||   ||| ||| | |||||| ||||||||||  || || ||||||| |||| | |||||||||||| |||| |  ||||||    
T  5926713 cttgtgtttataattgttccttacactttg-ttttggttacttgattattccttacttcacacatgaagtttgttattggtgtgagttttcatcgaattc 5926615  T
Q  234 acaata 239  Q
    ||||||    
T  5926614 acaata 5926609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 17795428 - 17795667
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||| || |    ||| ||||||||||||| | ||||||||||||| | ||||||   |||||||||||| || |    
T  17795428 tctcttttgtaaagttactcatcattataatgaaacggaaggctgctctctcccctagactaggtcaatttga-accgaattaggtaaacaaattctctt 17795526  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataattcttcc-cac-gttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||| ||||||  |||||  ||  || || |||||||||||| |||   |||||||||    
T  17795527 gtgttctctctttcttttctctcgttgttttctacttttgtttgtgattataa--cttccatacattttattttggttgcttgactatcagttgctccac 17795624  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||| | | ||||||||||||||||| |  ||||||||||    
T  17795625 acatcaaatttattattggtgtgatttttcatcgaattcacaa 17795667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 19103868 - 19104107
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||| || |    ||| ||||||||||||| | ||||||||||||| | ||||||   |||||||||||| || |    
T  19103868 tctcttttgtaaagttactcatcattataatgaaacggaaggctgctctctcccctagactaggtcaatttga-accgaattaggtaaacaaattctctt 19103966  T
Q  100 gtgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataattcttcc-cac-gttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| |||| ||||||||| || |||||||||||| ||||| ||||||  |||||  ||  || || |||||||||||| |||   |||||||||    
T  19103967 gtgttctctctttcttttctctcgttgttttctacttttgtttgtgattataa--cttccatacattttattttggttgcttgactatcagttgctccac 19104064  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||| | | ||||||||||||||||| |  ||||||||||    
T  19104065 acatcaaatttattattggtgtgatttttcatcgaattcacaa 19104107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 6 - 237
Target Start/End: Original strand, 23633628 - 23633860
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgtt 104  Q
    ||||||||||||||||||||||||||| |    | | ||||||||||||| | ||||||||||||| ||||||||  ||||||||||||| |  ||||||    
T  23633628 tttgtaaagttactcatcattatagtgaaaaggagggctgctctctcccc-agactaggtcaattt-agaccgaaatgggtaaacaaattcttttgtgtt 23633725  T
Q  105 ctctttttctttctctcgctg-tttctactt-ttgcttgtgtttat-aattcttcccacgttgatattggttgcttgattat-ttttgctccacacatca 200  Q
    |||| ||||||||||||| || ||||||||| | |||||||||||| |||||    ||| ||| | |||||||||||||| |   ||||| ||||||||     
T  23633726 ctctctttctttctctcgatgttttctacttgtggcttgtgtttataaattccatacactttg-ttttggttgcttgattttcacttgcttcacacatct 23633824  T
Q  201 agtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||| |||||||||||||||||| |  ||||||||||    
T  23633825 agta-tttattggtgtgatttttcatcgaattcacaa 23633860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 18099257 - 18099026
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||  ||||||||||| ||||||||    | | ||||||||||||| | ||||||||||| |  |||||||| |||| |||||||| |  |    
T  18099257 tctcttttgtaacattactcatcat-atagtggaacggagggctgctctctcccctagactaggtcaatatg-gaccgaactgggtcaacaaattctttt 18099160  T
Q  100 gtgttctctttttctt-tctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgc 189  Q
    ||||||||||||  || ||||||||||||    |||||||||| |||||||||| |||| ||||   ||| ||||| || |||||||||||||   ||||    
T  18099159 gtgttctcttttctttctctctcgctgttgttttctacttttggcttgtgtttacaattgttccatacactttgatttttgttgcttgattatcccttgc 18099060  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||| | |||||||||||||||||    
T  18099059 tccacacatcaagtttgttattggtgtgattttt 18099026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 224
Target Start/End: Original strand, 32219296 - 32219487
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttt-tctttctctcgctgtt----tctactttt 136  Q
    |||||||||| |||| |||| | ||||||  |||||||| |||| |||||||| |  |||||||||| || | ||||||||||||||    |||||||||    
T  32219296 ctgctctctctcccagactatgccaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgctgttgttttctactttt 32219394  T
Q  137 g-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    | ||||||||||||||| ||||   ||| ||||| ||||||||||||||||   |||||||||||||||||| | ||||| ||||||||||||    
T  32219395 ggcttgtgtttataattgttccatacactttgattttggttgcttgattatcccttgctccacacatcaagtttgttatttgtgtgatttttt 32219487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43226255 - 43226477
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||| ||| ||    
T  43226255 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaa-ttcttg 43226351  T
Q  101 tgttctctttttc-tttctctcgc---tgtttctactttt-gcttgtgtttataattcttcc-cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    |||||||| || | ||||||||||   ||||||||||||| |||||| ||| ||||| ||||  ||  |  | |||||||||||||||| | ||||||||    
T  43226352 tgttctctcttccttttctctcgctgttgtttctacttttggcttgtattt-taattgttccatacacttgttttggttgcttgattatctcttgctcca 43226450  T
Q  194 cacatcaagtattttattggtgtgattt 221  Q
    |||||||||| | |||||||||||||||    
T  43226451 cacatcaagt-tgttattggtgtgattt 43226477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 53915583 - 53915354
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||| ||||| |    | | ||||||||||||||| |||||||||||||| ||| |||| |||| |||||||| |  |    
T  53915583 tctcttttgtaatgttactcatcatt-tagtgaaacggagggctgctctctcccccagactaggtcaatttt-gactgaactgggtcaacaaattctttt 53915486  T
Q  100 gtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
    ||||||||| ||  ||||||||||||    ||||||||||| |||||||||||||||| || |   ||| ||| | |||||||||||| |||   |||||    
T  53915485 gtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacac-ttggttttggttgcttgactatcccttgct 53915387  T
Q  191 ccacacatcaagtattttattggtgtgattttt 223  Q
    ||| ||||||||| | |||||||||||||||||    
T  53915386 ccatacatcaagtttgttattggtgtgattttt 53915354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 880538 - 880311
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||  | |  | | ||||||||||||| | |||||||||||||  |||||| | |||| |||||||| |  |    
T  880538 tctcttttgtaaagttactcatcat-atagtaaaatggagggctgctctctcccctagactaggtcaatttg-gaccgagctgggtcaacaaattctttt 880441  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttgctt-gtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctcca 193  Q
    ||||||||| ||  ||||||||||||||| ||||||||| || ||| |||||| | ||||   ||| ||| | ||||||||||||||| |  ||||||||    
T  880440 gtgttctctcttcttttctctcgctgttttctacttttggtttgtgattataactgttccatacactttgtt-ttggttgcttgattaatccttgctcca 880342  T
Q  194 cacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||| | |||| |||||||||||||    
T  880341 cacatcaagtttgttatgggtgtgatttttt 880311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 129 - 222
Target Start/End: Original strand, 21702850 - 21702944
Alignment:
Q  129 ctacttttgcttgtgtttataatt-cttcccacgtt-gatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||  ||||||||||| || ||||| || ||||||| ||||||||||||||| || |||||||||||||||||||||||| |||||||    
T  21702850 ctacttttgctcttgtttataattgctacccacatttgatattgattgcttgattatttt-gcaccacacatcaagtattttattggtatgatttt 21702944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 51943540 - 51943702
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | |||||||||||||||||||||||||| ||| |||||||| |||| |||||||| || |    
T  51943540 tctcttttgtaacgttactcatcat-atagtgaaacggatggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctctt 51943637  T
Q  100 gtgttctct-ttttc----tttctctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||||||| || ||    |||||||||||| ||||||||||| |||||||||||||||| ||||    
T  51943638 gtgttctctcttctcttcttttctctcgctgttttctacttttggcttgtgtttataattgttcc 51943702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 5 - 157
Target Start/End: Complemental strand, 32264121 - 32263966
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||||||||||||||||||    | | ||||||||||||||| |||||||| | ||| |||| ||| || | ||||| | |  ||||||    
T  32264121 ttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccagactaggtcta-tttggaccaaactggatcaacaattcttttgtgtt 32264023  T
Q  105 ctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    |||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||    
T  32264022 ctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttcc 32263966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 43423509 - 43423324
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gct 139  Q
    ||||||||||||  | |||||||||||||  |||||||| |||| |||||||| |  |||||||||| ||  |||||||||||| ||||||||||| |||    
T  43423509 ctgctctctccctgagactaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctcttcttttctctcgctgttttctacttttggct 43423411  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| ||||   ||| ||| | |||||||||||| |||   |||||||||||||||| | | |||||||||| ||||||    
T  43423410 tgtgtttataattgttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaactttgttattggtgtaattttt 43423324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 53917751 - 53917522
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||| |    | | ||||||||||||||| |||||||| |  || |||||||| |||| |||||||| |  |    
T  53917751 tctcttttgtaaagttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtc-agattggaccgaactgggtcaacaaattctttt 53917654  T
Q  100 gtgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgct 190  Q
    ||||||||| ||  ||||||||||||    ||||||||||| |||||||||||||||| || |   ||| ||| | |||||||||||| |||   |||||    
T  53917653 gtgttctctcttcttttctctcgctgttgttttctacttttggcttgtgtttataattgtttcatacactttg-ttttggttgcttgactatcccttgct 53917555  T
Q  191 ccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| | ||||| |||||||||||    
T  53917554 ccacacatcaagtttgttattagtgtgattttt 53917522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 43 - 217
Target Start/End: Original strand, 24979919 - 24980104
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttt-tctttctctcgctgtt-----tctacttt 135  Q
    ||||||||||||||| |||||||||||||  || ||||| |||| |||||||| |  |||||||||| || | ||||||||| ||||     ||||||||    
T  24979919 ctgctctctcccccaaactaggtcaatttg-gatcgaactgggtcaacaaattcttttgtgttctctcttctttttctctcgttgttgtttttctacttt 24980017  T
Q  136 tg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtg 217  Q
    || ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   |||||||||||||||||| | |||||||||||    
T  24980018 tggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtg 24980104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 221
Target Start/End: Original strand, 43228461 - 43228687
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| || | |||||||| |  |    
T  43228461 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactggatcaacaaattctttt 43228558  T
Q  100 gtgttctctttttcttt-ctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || |||| |||||||||    |||||| |||| |||||| ||| ||||| ||||   ||| ||| | |||||||||||||||| | ||||    
T  43228559 gtgttctctcttcctttactctcgctgttgttttctaattttggcttgtattt-taattgttccatacactttg-ttttggttgcttgattatctcttgc 43228656  T
Q  190 tccacacatcaagtattttattggtgtgattt 221  Q
    |||||||||||||| | |||||||||||||||    
T  43228657 tccacacatcaagt-tgttattggtgtgattt 43228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 224
Target Start/End: Complemental strand, 4308368 - 4308138
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||||| |  |    
T  4308368 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 4308271  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||||| ||||||| |||||||| ||||   ||| ||| | ||||||| | |||||||  ||||    
T  4308270 gtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttccatacactttg-ttttggttgttggattattccttgc 4308172  T
Q  190 tccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||| | ||||||||||||| ||||    
T  4308171 tccacacatcaagt-tgttattggtgtgatatttt 4308138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 2 - 223
Target Start/End: Complemental strand, 12268061 - 12267835
Alignment:
Q  2 ctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtg 100  Q
    ||||||||||| |||||||||||| |||||| |  | | | ||||||||||||||| ||||| |||| ||| |||||||| |||| |||||||| |  ||    
T  12268061 ctcttttgtaacgttactcatcat-atagtgaaacagagggctgctctctcccccaaactagatcaa-tttggaccgaactgggtcaacaaattcttttg 12267964  T
Q  101 tgttctct-ttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    |||||||| || | | ||||||| || ||||||||||| |||||||||||||||| ||||   ||| ||| | |||||||||||| ||||   |||||||    
T  12267963 tgttctctcttctttctctctcgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactattccctgctcca 12267865  T
Q  194 cacatcaagtattttattggtgtgattttt 223  Q
    |||||||| | | |||||||||| ||||||    
T  12267864 cacatcaaatttgttattggtgtaattttt 12267835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 28102089 - 28101850
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||| ||||| ||||||||    | | ||||||||||||| |  ||||||||||||  |||| |||  ||| |||||||| |  |    
T  28102089 tctcttttgtaaagttacttatcat-atagtggaacggatggctgctctctccccaaagctaggtcaatttg-gaccaaactaggtcaacaaattctttt 28101992  T
Q  100 gtgttctctttttctttctctc--gctgttt-ctacttttgc-ttgtgtttataattcttcccacgttgatattggttgcttgattattt-ttgctccac 194  Q
    ||||||||| || |||||||||  ||||||| |||||||||  ||||||||| | | ||  |||| ||||| ||||||||||||||||   |||||||||    
T  28101991 gtgttctctcttcctttctctctcgctgttttctacttttgggttgtgttta-attgctatccactttgattttggttgcttgattatcccttgctccac 28101893  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||| | |||||||||| |||||| |  ||||||||||    
T  28101892 acatcaagtttattattggtgtaatttttcatcgaattcacaa 28101850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1321649 - 1321741
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  1321649 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 1321741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 9604694 - 9604602
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||||||||||||  ||| ||||||||    
T  9604694 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttagaccgaactaggtcaacaaatt 9604602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 29914041 - 29913952
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataaga-ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||  |||||||||||||||||||   |||| ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  29914041 tttgtaaagaaactcatcattatagtggatcg-aagagctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 29913952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 157 - 223
Target Start/End: Complemental strand, 31021092 - 31021027
Alignment:
Q  157 ccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||| ||||||||| ||||||  ||| |||| |||||||||||||||||||||||||||||||||||    
T  31021092 ccacattgatattgattgcttagttaatttt-ctccacacatcaagtattttattggtgtgattttt 31021027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 36011997 - 36012227
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||| |||||||||  | | | ||||||||| |  || |||||||||| ||| |||||||| || | |||||||| |  |    
T  36011997 tctcttttgtaacgttactcatca-tatagtggaacagagggctgctctcttcttcagactaggtcaa-tttggaccgaactggatcaacaaattctttt 36012094  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||||| |||||||||||||||| ||||   ||| ||| | ||||||| ||||||||   ||||    
T  36012095 gtgttctctcttctttttctctcgctgttgttttctacttttcgcttgtgtttataattgttccatacactttg-ttttggttgtttgattatcccttgc 36012193  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    |||| ||||||||| | |||||||||||||||||    
T  36012194 tccatacatcaagtttgttattggtgtgattttt 36012227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38890210 - 38890302
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||| |||||||||||| ||| |||||||| |||| ||||||||    
T  38890210 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccctatactaggtcaa-tttggaccgaactgggtcaacaaatt 38890302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 42 - 222
Target Start/End: Original strand, 16997009 - 16997191
Alignment:
Q  42 actgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttct-ttctctc--gctgtttctacttttg 137  Q
    ||||||| |||||||| ||||||| | | |  ||| |||| ||||||||||||| || ||||||||  |||||| |||||||  ||||||  || |||||    
T  16997009 actgctcactcccccagactaggtaagtatgggactgaactgggtaaacaaattctcttgtgttcttcttttctcttctctcttgctgttattatttttg 16997108  T
Q  138 cttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||| | |||||||| ||  |   ||||||||| ||||||||||| ||| |||||||| |||||||| |||||||||||||||||    
T  16997109 cttgcggttataattgttatccatttgatattgattgcttgattaattt-gctccacatatcaagta-tttattggtgtgatttt 16997191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 18162875 - 18163064
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgt-gtgttctctttt-tctttctctcgctg----tttctactttt 136  Q
    ||||||||||||||| |||||||||||||  |  ||||| | || |||||||||  | ||||||||| || | ||||||||||||    |||||||||||    
T  18162875 ctgctctctcccccagactaggtcaattt--ggacgaactgtgtcaacaaatttttttgtgttctctcttctttttctctcgctgcagttttctactttt 18162972  T
Q  137 g-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    | ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   || ||||||||||||| | | |||||||||||||||||    
T  18162973 ggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttactccacacatcaaatttattattggtgtgattttt 18163064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 21 - 106
Target Start/End: Complemental strand, 22626055 - 22625970
Alignment:
Q  21 atcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    |||||||||||||||   |  |||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  22626055 atcattatagtggatcggagaactgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 22625970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 10595083 - 10595031
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||||||||||||||||   ||||||||||| |||||||||||||    
T  10595083 ctgctctctcccccatactaggtcatcattagaccgaactgggtaaacaaatt 10595031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 126 - 223
Target Start/End: Complemental strand, 18096858 - 18096756
Alignment:
Q  126 tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatt 220  Q
    |||||||||||| ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   |||||||||||||||||| | |||||||||| |||    
T  18096858 tttctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctccacacatcaagtttgttattggtgtaatt 18096759  T
Q  221 ttt 223  Q
    |||    
T  18096758 ttt 18096756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 74 - 223
Target Start/End: Original strand, 28181245 - 28181401
Alignment:
Q  74 gaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctct--cgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttga 165  Q
    ||||||||  ||| |||||||| || |||||||||| ||  |||||||  |||||||| ||||||||| ||||||||||||||| ||||   ||| |||     
T  28181245 gaccgaactaggtcaacaaattctcctgtgttctctcttcttttctctgtcgctgttttctacttttggcttgtgtttataattgttccatacactttgt 28181344  T
Q  166 tattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    | ||||||| |||||| |  |||||||||||||||||| | |||||||||||||||||    
T  28181345 t-ttggttgtttgattgtccttgctccacacatcaagtttgttattggtgtgattttt 28181401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 172 - 223
Target Start/End: Complemental strand, 16928186 - 16928135
Alignment:
Q  172 ttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||||||| ||||||| |||||||||||| | ||||||    
T  16928186 ttgcttgattatttttgctccatacatcaaatattttattggtctaattttt 16928135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 24181678 - 24181733
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||  || ||||||||||||||||||||||| ||||||||||    
T  24181678 ttggttgcttgattattaatttctccacacatcaagtattttattagtgtgatttt 24181733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 25389080 - 25389169
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||||    
T  25389080 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatttc 25389169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 51674853 - 51674626
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt---tc 97  Q
    |||||||||||| |||||||||||| ||| || | |  | | |||||||||||||||||| ||||||||||  ||||||||  ||| ||||||||   |     
T  51674853 tctcttttgtaatgttactcatcat-atactgaaatggagggctgctctctcccccataccaggtcaatttg-gaccgaacttggtcaacaaattctttt 51674756  T
Q  98 gtgtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc-----cacgttgatattggttgcttgattattt-ttgc 189  Q
    ||||  |||||| || | ||||||||||||| ||||||||| |||||||||||| || ||||     ||| ||| |  ||||||||||||||||  ||||    
T  51674755 gtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttatatttgttccatacccac-ttgtt--tggttgcttgattattccttgc 51674659  T
Q  190 tccacacatcaagtattttattggtgtgatttt 222  Q
    |||| ||||||||| | ||||||||||||||||    
T  51674658 tccatacatcaagtttgttattggtgtgatttt 51674626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 54193359 - 54193422
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  54193359 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 54193422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10084476 - 10084384
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||| | |||||||||| ||| |||||||| |||| ||||||||    
T  10084476 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctccccaagactaggtcaa-tttggaccgaactgggtcaacaaatt 10084384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1626770 - 1626543
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | |||||||||| |||| |||||||| ||||  ||||||||  ||| |||||||| |  |    
T  1626770 tctcttttgtaaggttactcatcat-atagtgaaacggagggctgctctctcgcccagactaggtcgatttg-gaccgaactaggtcaacaaattctttt 1626673  T
Q  100 gtgttctctttttctttctctcgc--tgtttct-acttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||||||| || ||||||||| |  ||||| | ||||||| ||||||||||||||| ||||   ||| ||| | ||| |||||||||||||  ||||||    
T  1626672 gtgttctctcttcctttctctctcgttgtttttcacttttgacttgtgtttataattgttccatacactttgtttttg-ttgcttgattattccttgctc 1626574  T
Q  192 cacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||| | ||||||||||| ||||    
T  1626573 cacacatcaagtttgttattggtgtggtttt 1626543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 10094124 - 10094063
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||    
T  10094124 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10094063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 10100141 - 10100080
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||    
T  10100141 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10100080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 10201004 - 10200943
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||    
T  10201004 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10200943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 43 - 108
Target Start/End: Complemental strand, 10612827 - 10612763
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctct 108  Q
    ||||||||||||||| |||||||||   ||||||||||| ||||||||||| ||| ||||||||||    
T  10612827 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctct 10612763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 11007611 - 11007578
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  11007611 tctcttttgtaaagttactcatcattatagtgga 11007578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 54884324 - 54884357
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  54884324 tctcttttgtaaagttactcatcattatagtgga 54884357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 747100 - 747175
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  747100 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 747175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 10897138 - 10897190
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  10897138 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 10897190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 47878220 - 47878168
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||| ||| ||||||||| | ||||||||||| |||||||||||||    
T  47878220 ctgctctctcctccagactaggtcattattagaccgaactgggtaaacaaatt 47878168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 51726922 - 51726863
Alignment:
Q  162 ttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| |||||||| |||||||| |||| ||||||||||||| | ||||||||||||||||    
T  51726922 ttgattttggttgcctgattattcttgccccacacatcaagt-tgttattggtgtgatttt 51726863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 97
Target Start/End: Original strand, 746932 - 747021
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||| |||||||||||| |||||||||   | ||||||||||||||||| |||||||| |  || |||||||| |||| ||||||||||    
T  746932 tttgtaacgttactcatcat-atagtggatcggaggactgctctctcccccagactaggtc-agattggaccgaactgggtcaacaaatttc 747021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 3306931 - 3306962
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtg 32  Q
    ||||||||||||||||||||||||||||||||    
T  3306931 tctcttttgtaaagttactcatcattatagtg 3306962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 16 - 95
Target Start/End: Original strand, 3859712 - 3859789
Alignment:
Q  16 tactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||| |||||||||  || | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  3859712 tactcatcat-atagtggatcgtagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 3859789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Complemental strand, 10958233 - 10958179
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  10958233 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 10958179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 6 - 57
Target Start/End: Original strand, 13420055 - 13420106
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctccccca 57  Q
    ||||||||||||||||||||||||||||| ||   |||| ||||||||||||    
T  13420055 tttgtaaagttactcatcattatagtggaatagtggactcctctctccccca 13420106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10191397 - 10191305
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||  | |||||||||| ||| |||||||| |||| ||||||||    
T  10191397 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctccctaagactaggtcaa-tttggaccgaactgggtcaacaaatt 10191305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10958410 - 10958318
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| ||||||| |||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  10958410 tctcttttgtaacgttactcttcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 10958318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 25533612 - 25533681
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||| | |||||||||||||    
T  25533612 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctcccctagactaggtcaattt 25533681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 27544405 - 27544483
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    |||||||||||| || |||||||||   ||||||||||| |||||||||||| || | |||||| | ||||| ||||||    
T  27544405 ctgctctctccctcagactaggtcatcattagaccgaactgggtaaacaaatatcttatgttctttctttctctctctc 27544483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 42990474 - 42990566
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| || ||| ||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  42990474 tctcttttgtaacgttactcatcat-atggtgaatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 42990566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 47148982 - 47148823
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||  |||||||||||| |||||| |  | | ||||||||||||||||| |||| ||||||||  | ||||||  ||| |||||||| |  |    
T  47148982 tctcttttgtatcgttactcatcat-atagtgaaacagaggactgctctctcccccagactatgtcaatttg-gcccgaactaggtcaacaaattattct 47148885  T
Q  100 gtgttctctttttctttctctcgc--tgttt-ctacttttg-cttgtgtttataattcttcc 157  Q
    ||||||||| || ||||||||| |  ||||| ||||||||| ||||||||||||||| ||||    
T  47148884 gtgttctctcttcctttctctctcgttgttttctacttttgacttgtgtttataattgttcc 47148823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 50494346 - 50494415
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| ||||| | |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  50494346 ttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 50494415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 5886381 - 5886460
Alignment:
Q  14 gttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  5886381 gttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 5886460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 14 - 95
Target Start/End: Original strand, 5899854 - 5899933
Alignment:
Q  14 gttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  5899854 gttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 5899933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 7606670 - 7606583
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| ||||||| |||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  7606670 tttgtaacgttactcgtcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 7606583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 104
Target Start/End: Complemental strand, 10208050 - 10207989
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    |||||||||||| || |||||||||   ||||||||||| |||||||||||| || ||||||    
T  10208050 ctgctctctcccgcagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgtt 10207989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 11066928 - 11066995
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||| ||| |||| ||| | ||||||||||||||| |||| ||||||| ||||||||||    
T  11066928 ttggttgcttgattaattt-gctcgacaaaacaagtattttattggggtga-tttttaacgaattcacaa 11066995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Original strand, 11168443 - 11168503
Alignment:
Q  162 ttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||    
T  11168443 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 11168503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 43 - 96
Target Start/End: Original strand, 42992481 - 42992533
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt 96  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||||    
T  42992481 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattt 42992533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 186 - 223
Target Start/End: Original strand, 45883304 - 45883341
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||| | |||||||||||||||||    
T  45883304 ttgctccacacatcaagtttgttattggtgtgattttt 45883341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 1321845 - 1321881
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  1321845 ttgctccacacatcaagtttgttattggtgtgatttt 1321881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 110
Target Start/End: Original strand, 4535747 - 4535814
Alignment:
Q  43 ctgctctctcc-cccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctcttt 110  Q
    ||||||||||| |||| |||||||||   ||||||||||| ||||||||||| ||| ||||||||||||    
T  4535747 ctgctctctcctcccagactaggtcatcattagaccgaactgggtaaacaaa-ttcttgtgttctcttt 4535814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 9604518 - 9604463
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||| ||||||||||  |||||||||||||||||| | |||||||||||||||||    
T  9604518 ttggttacttgattattccttgctccacacatcaagt-tgttattggtgtgattttt 9604463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #90
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 15781090 - 15781141
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  15781090 ctgctctctcccccacactaggtcaa-tttggaccgaactgggtcaacaaatt 15781141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #91
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 35919161 - 35919110
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  35919161 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 35919110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #92
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 221
Target Start/End: Original strand, 38890382 - 38890441
Alignment:
Q  162 ttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattt 221  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | |||||||||||||||    
T  38890382 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattt 38890441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #93
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 41849270 - 41849321
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  41849270 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 41849321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #94
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Original strand, 42990665 - 42990701
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  42990665 ttgctccacacatcaagtttgttattggtgtgatttt 42990701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #95
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 48390351 - 48390299
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||| ||||||| |||||||||||||    
T  48390351 ctgctctctcccccagactaggtcatcattaaaccgaactgggtaaacaaatt 48390299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #96
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 53894103 - 53894052
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  53894103 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 53894052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 113; Significance: 6e-57; HSPs: 89)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 113; E-Value: 6e-57
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24813588 - 24813364
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||| |||||||||||||||||||||||||||||    | | ||||| ||||||||| ||||||||| |||| |||||||| |||||||||||||| |||    
T  24813588 tctcctttgtaaagttactcatcattatagtggagcggatggctgctttctcccccagactaggtcagttttggaccgaactgggtaaacaaattttgtg 24813489  T
Q  101 tgttctctttttcttt-ctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatt-tttgctccacaca 197  Q
    |||||||| || |||| |||||| ||||| ||||||||| || ||||||||||| || ||||||||||||||||||||||||||||  ||||||||||||    
T  24813488 tgttctctcttccttttctctcgttgttttctacttttgtttatgtttataattgttaccacgttgatattggttgcttgattattacttgctccacaca 24813389  T
Q  198 tcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||| |||||||||    
T  24813388 tcaagtattttattgatgtgatttt 24813364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 105; E-Value: 4e-52
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 24817443 - 24817219
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||||||||||||| |||| ||||||||  ||||||| | |||||||    
T  24817443 tctcttttgtaaagttactcatcattatagtggaacggatggctgctctctcccccatactaggtcagttttggaccgaacttggtaaacgagtttcgtg 24817344  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatt-tttgctccacaca 197  Q
    |||||| | |||| ||||||||| || |||||| ||||| |||||||||||| | || |||||||||||||| || ||||||||||  ||||||||||||    
T  24817343 tgttctgtctttcttttctctcgttgttttctaattttgtttgtgtttataactgttaccacgttgatattgttttcttgattattacttgctccacaca 24817244  T
Q  198 tcaagtattttattggtgtgatttt 222  Q
    | |||||||||||||||||||||||    
T  24817243 ttaagtattttattggtgtgatttt 24817219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 96; E-Value: 9e-47
Query Start/End: Original strand, 1 - 182
Target Start/End: Original strand, 6332420 - 6332600
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    ||||||| ||||||||| | ||||||||| | || |||||||| ||||||||||||||||||    
T  6332420 tctcttttgtaaagttactcatcattatagtggaacggaagactgttctctcccctagactaggtcagtattggaccgaactgggtaaacaaatttcgtg 6332519  T
Q  101 tgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgatta 182  Q
    |||||||| |  |||||| ||||| ||| |||||||||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  6332520 tgttctctct--ctttctgtcgctattttctacttttgcttgtgtttataattgttctcacgttgatattagttgcttgatta 6332600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 3 - 224
Target Start/End: Original strand, 7188741 - 7188963
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtg 102  Q
    ||||||||||||||| ||||||||||||||||    ||| ||||||||| |||||  ||| |||| |||| ||| ||||  ||||||||||||| | |||    
T  7188741 tcttttgtaaagttattcatcattatagtggaacggaaggctgctctcttccccagtctatgtcagttttggactgaactaggtaaacaaattttgcgtg 7188840  T
Q  103 ttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacaca 197  Q
    |||||||| | |||||||||||| |||||||||||||||||||||||||  |||||   ||| ||| | |||||||||||||||||  ||||||||||||    
T  7188841 ttctctttct-tttctctcgctgttttctacttttgcttgtgtttataa--cttccatacactttg-ttttggttgcttgattattacttgctccacaca 7188936  T
Q  198 tcaagtattttattggtgtgatttttt 224  Q
    ||||||||||||||| |||||||||||    
T  7188937 tcaagtattttattgatgtgatttttt 7188963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 52 - 237
Target Start/End: Original strand, 6049123 - 6049308
Alignment:
Q  52 cccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataa 150  Q
    |||||||||||| ||| |  | ||||||||  |||| ||||||| |||||||||||| | | ||||||||||| ||| ||| |||||||| |||||||||    
T  6049123 cccccatactagctcagtaatggaccgaactaggtagacaaattccgtgtgttctctctctttttctctcgctattttctaattttgcttatgtttataa 6049222  T
Q  151 ttctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    || || ||||||||||||||||||||||||||| ||| |||||| |||||||||||||||||||||||| ||||||| ||||||||||    
T  6049223 ttgttacccacgttgatattggttgcttgattaattt-gctccatacatcaagtattttattggtgtga-tttttaacgaattcacaa 6049308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 44 - 223
Target Start/End: Original strand, 11081752 - 11081933
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctct-ttttctttctctcgctg-tttctacttttgcttg 141  Q
    |||||||||||||| ||||||||||| || |||||||| |||||||||||||| ||||||||||| |||| || ||||||||| ||||||| ||| ||||    
T  11081752 tgctctctcccccagactaggtcaatattggaccgaactgggtaaacaaattttgtgtgttctctctttttttcctctcgctgttttctaccttttcttg 11081851  T
Q  142 tgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||  ||||| ||  ||| |||| | |||||||||||||||||||| ||  |||||||||||||||||||| ||||||||||    
T  11081852 tgttcttaattgttagccaagttgtttttggttgcttgattattttt-cttgacacatcaagtattttattgatgtgattttt 11081933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 73; E-Value: 5e-33
Query Start/End: Original strand, 6 - 223
Target Start/End: Original strand, 6046698 - 6046916
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataaga-ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    ||||||||||||||||||||||||||||| |  |||| ||||||||||||||| ||||||||| | || |||||||  || || |||||||  |  ||||    
T  6046698 tttgtaaagttactcatcattatagtggaat-gaagagctgctctctcccccagactaggtcagtattggaccgaattggatagacaaattatgcatgtt 6046796  T
Q  105 ctctttttctttctctcg-ctgtttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaag 202  Q
    |||| | | |||||||||  | ||||||||||||||||||||||||||| || |||||||||||||||||||||| |||| |||| ||  ||||||||||    
T  6046797 ctctctctttttctctcgtttttttctacttttgcttgtgtttataattgttacccacgttgatattggttgcttaattaatttt-cttaacacatcaag 6046895  T
Q  203 tattttattggtgtgattttt 223  Q
    ||||||||  || ||||||||    
T  6046896 tattttatcagtttgattttt 6046916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 31435136 - 31434910
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||| |||||||||| |||  ||||||| |||| |||||||| |  |    
T  31435136 tctcttttgtaaagttactcatcattatagtggaacggagggctgctctctcccccaaactaggtcaa-tttgtaccgaactgggtcaacaaattctttt 31435038  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    ||||||||| ||  ||||||||| || ||||||||||| |||||||||||||||| ||||   ||| || || ||| |||||||||||||  ||||||||    
T  31435037 gtgttctctcttcttttctctcgttgttttctacttttggcttgtgtttataattgttccttacac-tttattttgattgcttgattattccttgctcca 31434939  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    |||||||||| | ||||||||||||||||    
T  31434938 cacatcaagtttgttattggtgtgatttt 31434910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 44 - 237
Target Start/End: Complemental strand, 40281430 - 40281237
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttcttt-ctctcgctgttt-ctactttt-gctt 140  Q
    |||||||||||||| ||||| ||| | || ||| |||| | |||||||||||| ||||||||||| ||||||| |||| ||||||| ||| |||| ||||    
T  40281430 tgctctctcccccagactagttcagtattggacagaactgtgtaaacaaattttgtgtgttctctctttcttttctctagctgttttctaatttttgctt 40281331  T
Q  141 gtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    || ||||||||| || ||||   |||||||||||| |||||| | |||| ||||||||||||||||||||||| ||||| |||| || ||||||||||    
T  40281330 gtatttataattgttaccca---tgatattggttgtttgatt-tctttgttccacacatcaagtattttattgttgtgacttttcaacgaattcacaa 40281237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 21990350 - 21990570
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||| |||||||||  | | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||||| |  |    
T  21990350 tctcttttgtaacgttactcatca-tatagtggaacagagggctgctctctccccaagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 21990447  T
Q  100 gtgttctctttttctt--tctctcgctgttt-ctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    ||||||||| || |||  ||||||||||||| |||||||| |||||||||||||||| ||||   ||| ||||| |||||||| |||||||   ||||||    
T  21990448 gtgttctctcttcctttctctctcgctgtttgctacttttggcttgtgtttataattgttccatacactttgattttggttgcctgattatcccttgctc 21990547  T
Q  192 cacacatcaagtattttattggt 214  Q
    |||||||||||| | ||||||||    
T  21990548 cacacatcaagtttattattggt 21990570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 26295647 - 26295798
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||| |  | | ||||||||||||| ||| |||||||||| ||| ||| |||| || |||||||| ||| ||    
T  26295647 tctcttttgtaaagttactcatcattatagtgaaacagatgactgctctctcctccagactaggtcaa-tttggactgaactggataaacaaa-ttcttg 26295744  T
Q  101 tgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataatt 152  Q
    |||| ||| ||||||||| ||| || ||||||||||| ||||||||||||||||    
T  26295745 tgttatctctttctttctttcgttgttttctacttttggcttgtgtttataatt 26295798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 237
Target Start/End: Complemental strand, 13099560 - 13099319
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgt 103  Q
    |||||||||||||||||||||||||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||    
T  13099560 ttttgtaaagttactcatcattatagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgt 13099462  T
Q  104 tctctttttc-tttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||| || | ||||||||||||    ||||||||||| |||||||||||||||| ||||   ||| ||| | ||||||| ||||  ||   ||||||||    
T  13099461 tctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgtttgacgatcccttgctcca 13099363  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | ||||||||||||||||| |  ||||||||||    
T  13099362 cacatcaagtttgttattggtgtgatttttcatcgaattcacaa 13099319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 4296023 - 4295797
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |  | | | ||||| |||||||||||||||||||| ||| |||||||| |||| |||||||| |  |    
T  4296023 tctcttttgtaacgttactcatcat-atagtgaaacagagggctgctatctcccccatactaggtcaa-tttggaccgaactgggtgaacaaattctttt 4295926  T
Q  100 gtgttctctttttctttctctcg-ctgtttctactttt-gcttgtgtttataattcttc---ccacgttgatattggttgcttgattatt-tttgctcca 193  Q
    ||||||||| ||  ||||||||| |  ||||||||||| |||||||||||| ||| |||    ||| ||| | ||||||||||||| |||  ||||||||    
T  4295925 gtgttctctcttcttttctctcgccattttctacttttggcttgtgtttattattgttctatacactttg-ttttggttgcttgatgattccttgctcca 4295827  T
Q  194 cacatcaagtattttattggtgtgattttt 223  Q
    |||||||||| | |||||||||||||||||    
T  4295826 cacatcaagtttgttattggtgtgattttt 4295797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 71 - 237
Target Start/End: Original strand, 6349069 - 6349234
Alignment:
Q  71 ttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcc---cacgttgat 166  Q
    ||||| ||||| ||||||||||||||| |||  ||||| ||||||||||||||| ||| ||||||||||||||||||||||  |||||   ||| ||| |    
T  6349069 ttagatcgaactgggtaaacaaatttcctgt--tctctctttctttctctcgctattttctacttttgcttgtgtttataa--cttccgtacactttg-t 6349163  T
Q  167 attggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
     |||||||||||||||||  |||||||| || ||||||| ||||||||||||| |||| || || |||||||    
T  6349164 tttggttgcttgattattacttgctccatacgtcaagta-tttattggtgtgagttttgaacgatttcacaa 6349234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 16297112 - 16296961
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc-gt 99  Q
    ||||||||| ||||||||||||||||||||| ||    |   ||||||||||||| | |||| |||| | || |||||||| | ||||||||||||| ||    
T  16297112 tctcttttgcaaagttactcatcattatagtagaacggagagctgctctctcccctagactatgtcagtattggaccgaactgtgtaaacaaatttccgt 16297013  T
Q  100 gtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataatt 152  Q
    ||||||||| |  ||||||||||  |||| ||||||||||||||||||||||||    
T  16297012 gtgttctctct--ctttctctcgtcgttttctacttttgcttgtgtttataatt 16296961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 43 - 237
Target Start/End: Original strand, 21678307 - 21678504
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctactttt-gctt 140  Q
    ||||||||||||| | ||||||| || ||| |||||||| |||  |||||| ||| |||||||||| ||  |||||| ||||| ||||||||||| ||||    
T  21678307 ctgctctctcccctagactaggttaa-tttggaccgaactgggacaacaaa-ttcttgtgttctctcttcttttctcccgctgttttctacttttggctt 21678404  T
Q  141 gtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgattttttaaggaattcaca 236  Q
    |||||||||||| ||||   ||| ||| | |||||||||||||||||  |||||||||| ||||||| | |||| |||||||||||| |  |||||||||    
T  21678405 gtgtttataattgttccttacactttg-ttttggttgcttgattattccttgctccacaaatcaagtttgttatcggtgtgatttttcatcgaattcaca 21678503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 27832722 - 27832490
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||| ||||||||||||||||||||||||| | |  | | || |||||||||||| |||||||||||||      |||| ||||||||||| ||| ||    
T  27832722 tctcttctgtaaagttactcatcattatagtgaaatggagggcttctctctcccccagactaggtcaattt------gaactgggtaaacaaa-ttcttg 27832630  T
Q  101 tgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccac 194  Q
    |||| ||| |||||||||||| ||| ||||||||||| | ||||| ||||||  |||||   ||| ||| | |||||| |||||||||||  ||||||||    
T  27832629 tgttatctctttctttctctcactgttttctacttttggtttgtgattataa--cttccatacactttg-ttttggttacttgattatttcctgctccac 27832533  T
Q  195 acatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||| |||| | |||||||| |||||||| |  ||||||||||    
T  27832532 acattaagtttgttattggtatgatttttcatcgaattcacaa 27832490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 44724779 - 44725000
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  44724779 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 44724876  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataat-tcttcc---cacgttgatattggttgcttgattat-ttttgctcc 192  Q
    ||||||||| ||  ||||||||| || ||||||||||| ||||||||||||||| | ||||   ||| ||| | |||||||||||| |||   |||||||    
T  44724877 gtgttctctcttcatttctctcgttgttttctacttttggcttgtgtttataatatgttccatacactttg-ttttggttgcttgactatcccttgctcc 44724975  T
Q  193 acacatcaagtattttattggtgtg 217  Q
    ||||||||||| | |||||||||||    
T  44724976 acacatcaagtttgttattggtgtg 44725000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 42223358 - 42223586
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| | |  | | |||||||||||||||||||||||||||||| || ||||| |||| |||||||| |  |    
T  42223358 tctcttttgtaacgttactcatcat-atagtgaaatggatggctgctctctcccccatactaggtcaatttt-gatcgaactgggtcaacaaattctttt 42223455  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattctt---cccacgttgatattggttgcttgattat-ttttgctcca 193  Q
    || |||||| ||  ||||||||  || |||||||||||| ||||||||||||||| ||     ||| || || ||||||||||||||||   || |||||    
T  42223456 gttttctctcttcttttctctcattgttttctacttttgccttgtgtttataattgttttatacac-tttattttggttgcttgattatcccttactcca 42223554  T
Q  194 cacatcaagtattttattggtgtgatttttta 225  Q
    |||||||||| | ||||||||||| |||||||    
T  42223555 cacatcaagtttgttattggtgtgttttttta 42223586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 224
Target Start/End: Complemental strand, 6067247 - 6067064
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctt---tctctcgctgtttctacttttgc 138  Q
    ||||||||||||||||||||||||| | || ||||| || ||||||||||||| ||  |||||||  |||||||   ||||| | ||||  || ||||||    
T  6067247 ctgctctctcccccatactaggtcagtattggaccggactgggtaaacaaattctctcgtgttcttcttttcttttctctcttgttgttattatttttgc 6067148  T
Q  139 ttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    ||| | |||||||| ||  |||| ||||||||| ||| |||||||  |||||||||||||||||||| ||| |||||||||||||||    
T  6067147 ttgcggttataattgttatccac-ttgatattgattgtttgatta-atttgctccacacatcaagta-tttgttggtgtgatttttt 6067064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 47 - 221
Target Start/End: Complemental strand, 42331041 - 42330864
Alignment:
Q  47 tctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctgttt-ctacttttg-cttgtg 143  Q
    ||||||||||| | |||||||||||  |||||||| |||| |||||||| |  |||||||||| |||||  |||||||||||| ||||||||| ||||||    
T  42331041 tctctcccccagattaggtcaatttg-gaccgaactgggtcaacaaattcttttgtgttctctctttct--ctctcgctgttttctacttttggcttgtg 42330945  T
Q  144 tttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattt 221  Q
    ||||||||| ||||   ||| ||| | ||||||||||||||||   |||||||||||||||||| | ||||||| |||||||    
T  42330944 tttataattgttccatacactttg-ttttggttgcttgattatccattgctccacacatcaagtttattattggcgtgattt 42330864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 21592232 - 21592073
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttc 97  Q
    |||||||||||| |||||||||||| |||||| |    | | |||||||||||||||||||||||||| ||| |||||||| |||| ||||||   |||     
T  21592232 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaattctttt 21592135  T
Q  98 gtgtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||  |||||| || | |||||||||| ||||||||||| |||||||||||||||| ||||    
T  21592134 gtgttctctcttcttttctctctcgctgttttctacttttggcttgtgtttataattgttcc 21592073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 1850181 - 1850273
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | |||||||||||||||||||||||||| ||| |||||||| |||| ||||||||    
T  1850181 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccatactaggtcaa-tttggaccgaactgggtcaacaaatt 1850273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 6 - 120
Target Start/End: Complemental strand, 13290559 - 13290445
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttc 105  Q
    ||||||||||||||||||||||||| |||  | |   || | ||||||| || ||| ||||| | || |||||||| |||||||||||||||||||||||    
T  13290559 tttgtaaagttactcatcattatagcggaacagagagctacactctccctcagacttggtcagtattggaccgaactgggtaaacaaatttcgtgtgttc 13290460  T
Q  106 tctttttctttctct 120  Q
    ||| |||| ||||||    
T  13290459 tctctttccttctct 13290445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 137
Target Start/End: Complemental strand, 20137198 - 20137062
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |    | | ||||||||| ||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  20137198 tctcttttgtaaagttactcatcattatagtgaaacggagggctgctctct-ccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 20137101  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg 137  Q
    ||||||||| ||  |||||||||||| ||||||||||||    
T  20137100 gtgttctctcttcttttctctcgctgttttctacttttg 20137062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 137
Target Start/End: Original strand, 22393922 - 22394059
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |    | |  || ||||||||| | |||||||||||||  |||| ||| ||||||||||||| |  |    
T  22393922 tctcttttgtaaagttactcatcattatagtgaaacggagggttgttctctcccctagactaggtcaatttg-gaccaaactgggtaaacaaattctttt 22394020  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg 137  Q
    ||||||||| ||||||||||||| || ||||||||||||    
T  22394021 gtgttctctctttctttctctcgttgttttctacttttg 22394059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 24748794 - 24749017
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||||||||||| |    | | ||||||||||| ||| | |||||||| ||| |||||||| | || |||||||| |  |    
T  24748794 tctcttttgtaaggttactcatcattatagtgaaacggagggctgctctctcctccagattaggtcaa-tttggaccgaactgagtcaacaaattctttt 24748892  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccac 194  Q
    ||||||||| ||| ||||||||| || |||||||||||| ||||| ||||||  |||||   ||| ||| | ||||||| ||||||||   |||||||||    
T  24748893 gtgttctctctttatttctctcgttgttttctacttttgtttgtgattataa--cttccatacactttg-ttttggttgtttgattatcccttgctccac 24748989  T
Q  195 acatcaagtattttattggtgtgatttt 222  Q
    ||||||||| | ||||||||||| ||||    
T  24748990 acatcaagtttgttattggtgtggtttt 24749017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 9679259 - 9679482
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||| |    |  ||||||||||  |||| |||||||||||||  ||||  || |||| |||||||| |  |    
T  9679259 tctcttttgtaaagttactcatcat-atagtgaaacggagtactgctctctttcccagactaggtcaatttg-gaccagactgggtcaacaaattctttt 9679356  T
Q  100 gtgttctctttttctttctctc--gctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctc 191  Q
    ||||| ||| || |||||||||  ||||||| ||||||||| ||||||||||||||| ||||   ||| ||||| |||||||| |||||||   ||||||    
T  9679357 gtgttatctcttcctttctctctcgctgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgcctgattatcacttgctc 9679456  T
Q  192 cacacatcaagtattttattggtgtg 217  Q
    |||||||||||| | |||||||||||    
T  9679457 cacacatcaagtttgttattggtgtg 9679482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 74 - 237
Target Start/End: Original strand, 25276401 - 25276564
Alignment:
Q  74 gaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttc-ccacgttgatatt 169  Q
    |||||||| || |||||||||| |  |||||||||| ||| ||||||||| ||||| ||||||||  ||||||||||  ||| ||  |||| ||||||||    
T  25276401 gaccgaactggttaaacaaattcttttgtgttctctctttttttctctcgttgttttctactttttacttgtgttta--attgttatccactttgatatt 25276498  T
Q  170 ggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||  || | |||||||||||||| | |||||||||||||||||||  ||||||||||    
T  25276499 ggttgcttgattaactt-gatccacacatcaagt-tgttattggtgtgattttttagcgaattcacaa 25276564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20626238 - 20626465
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  20626238 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 20626335  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    |||||||||  | | ||||||||||||    ||||||||||| |||| | |||||||  |||||   ||| || || |||||||||||||||| | ||||    
T  20626336 gtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacac-tttattttggttgcttgattatctcttgc 20626432  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||| || | |||||||||||||||||    
T  20626433 tccacacatcaggt-tgttattggtgtgattttt 20626465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20630129 - 20630356
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  20630129 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 20630226  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    |||||||||  | | ||||||||||||    ||||||||||| |||| | |||||||  |||||   ||| || || |||||||||||||||| | ||||    
T  20630227 gtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacac-tttattttggttgcttgattatctcttgc 20630323  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||| || | |||||||||||||||||    
T  20630324 tccacacatcaggt-tgttattggtgtgattttt 20630356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20642548 - 20642775
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  20642548 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 20642645  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    |||||||||  | | ||||||||||||    ||||||||||| |||| | |||||||  |||||   ||| || || |||||||||||||||| | ||||    
T  20642646 gtgttctctcatctttttctctcgctgttgttttctacttttggcttatatttataa--cttccatacac-tttattttggttgcttgattatctcttgc 20642742  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||| || | |||||||||||||||||    
T  20642743 tccacacatcaggt-tgttattggtgtgattttt 20642775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 3320100 - 3320022
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || |||||||||| | ||| ||||||    
T  3320100 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctctctctctctctctc 3320022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 3324848 - 3324770
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || |||||||||| | ||| ||||||    
T  3324848 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctctctctctctctctc 3324770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7472069 - 7471977
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  7472069 tctcttttgtaacgttactcatcat-atagtggatcggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 7471977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 43 - 121
Target Start/End: Complemental strand, 15541045 - 15540967
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || |||||||| ||| ||| ||||||    
T  15541045 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttctttttctctctctctc 15540967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 38394186 - 38394278
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  38394186 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 38394278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 40946528 - 40946620
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  40946528 tctcttttgtaacgttactcatcat-atagtggatcgaagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 40946620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 43253606 - 43253514
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||| | | | |||||||||||| || |||||||||| |||||||||||| |||| || |||||    
T  43253606 tctcttttgtaacgttactcatcat-atagtggatcagagggctgctctctccctcagactaggtcaa-tttagaccgaactgggtcaataaatt 43253514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 224
Target Start/End: Original strand, 11355586 - 11355689
Alignment:
Q  126 tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatt 220  Q
    |||||||||||| ||||||||||||||| ||||   ||| ||| | |||||||| ||||||||  |||||||||||||||| | | ||||||||||||||    
T  11355586 tttctacttttggcttgtgtttataattgttccatacactttgtttttggttgcctgattattccttgctccacacatcaaatttattattggtgtgatt 11355685  T
Q  221 tttt 224  Q
    ||||    
T  11355686 tttt 11355689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 41 - 137
Target Start/End: Original strand, 24465776 - 24465871
Alignment:
Q  41 gactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttg 137  Q
    ||||||||||||||||| ||||| ||||| | | ||||||| | |||||||||||||||||  ||||||| | |||||||||||| ||||||||||||    
T  24465776 gactgctctctcccccagactagatcaatatga-accgaactgagtaaacaaatttcgtgttctctctttct-tttctctcgctgttttctacttttg 24465871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 219
Target Start/End: Complemental strand, 27306319 - 27306096
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||| | |||||||||| ||| |||| ||| |||| |||||| ||| ||    
T  27306319 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccctagactaggtcaa-tttggaccaaactgggtcaacaaa-ttcttg 27306223  T
Q  101 tgttctctttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctc 191  Q
    |||||||| ||  ||||||||||||    ||||| ||||| ||||||| |||||||| ||||   ||| ||| | |||||||||||| |||   ||| ||    
T  27306222 tgttctctcttcttttctctcgctgttgttttcttcttttggcttgtgattataattgttccatacactttg-ttttggttgcttgactatcccttgttc 27306124  T
Q  192 cacacatcaagtattttattggtgtgat 219  Q
    |||||||||||| | |||||||||||||    
T  27306123 cacacatcaagtttgttattggtgtgat 27306096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 25405525 - 25405588
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  25405525 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 25405588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 131 - 237
Target Start/End: Original strand, 26214697 - 26214801
Alignment:
Q  131 acttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttttaagga 229  Q
    |||||||||||||||||||| | |  ||||||||| | ||||||||||||||| ||| |||||||| || ||||||||||| |||| || ||||||| ||    
T  26214697 acttttgcttgtgtttataactgtcacccacgttgtt-ttggttgcttgattaattt-gctccacagataaagtattttataggtgcga-tttttaatga 26214793  T
Q  230 attcacaa 237  Q
    ||||||||    
T  26214794 attcacaa 26214801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3035924 - 3036016
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||| || | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  3035924 tctcttttgcaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 3036016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 7470111 - 7470019
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||||||   | | |||||| |||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  7470111 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctccctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 7470019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 106
Target Start/End: Complemental strand, 8378552 - 8378490
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    |||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  8378552 tgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 8378490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 20297562 - 20297631
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||||||    
T  20297562 tctcttttgtaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaattt 20297631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 20297739 - 20297808
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  20297739 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 20297808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 48457853 - 48457945
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  48457853 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 48457945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 1046829 - 1046773
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||||    
T  1046829 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttttt 1046773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1047009 - 1046922
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  1047009 tttgtaacgatactcatcat-atagtggattggagggctgctctctcccccacactaggtcaa-tttggaccgaactgggtcaacaaatt 1046922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1049380 - 1049293
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| ||||||||||  | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  1049380 tttgtaacgatactcatcat-atagtggattggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 1049293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 22251635 - 22251602
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  22251635 tctcttttgtaaagttactcatcattatagtgga 22251602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 25276341 - 25276374
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    ||||||||||||||||||||||||||||||||||    
T  25276341 tctcttttgtaaagttactcatcattatagtgga 25276374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25351447 - 25351536
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||  |||||||||||||||||||   |   ||| ||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  25351447 tttgtaaagaaactcatcattatagtggatcggagagctgttctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 25351536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 2075248 - 2075300
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  2075248 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 2075300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 3 - 71
Target Start/End: Original strand, 9681022 - 9681089
Alignment:
Q  3 tcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    ||||||||||||||||||||||| |||||| | |  | | ||||||||||||||| |||||||||||||    
T  9681022 tcttttgtaaagttactcatcat-atagtgaaatggagggctgctctctcccccagactaggtcaattt 9681089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 11759504 - 11759559
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||    
T  11759504 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttt 11759559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 20299837 - 20299892
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||    
T  20299837 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattttt 20299892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 25410263 - 25410315
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  25410263 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 25410315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 34546929 - 34546877
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  34546929 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 34546877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 94
Target Start/End: Original strand, 7069912 - 7069963
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaat 94  Q
    ||||||||||||||| |||||||||   ||||||||||| ||||||||||||    
T  7069912 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaat 7069963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 7074919 - 7074982
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    |||| |||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  7074919 ctgcactctcccccagactaggtcatcattagaccgaaccgggtaaacaaatatcttgtgttct 7074982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 48458030 - 48458084
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  48458030 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 48458084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 3878777 - 3878869
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||||| |||| || || ||| |||||||| |||| ||||||||    
T  3878777 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctcccccagactatgttaa-tttggaccgaactgggtcaacaaatt 3878869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 7094549 - 7094480
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| |||||||||||| |||||| ||   | | ||||||||||||||| |||||||||||||    
T  7094549 tctcttttgtaatgttactcatcat-atagtgaatcggagggctgctctctcccccagactaggtcaattt 7094480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 51 - 145
Target Start/End: Complemental strand, 20091196 - 20091100
Alignment:
Q  51 tcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttc--tttctctcgctg-tttctacttttgcttgtgtt 145  Q
    ||||||| ||||||||| | || |||||||| || |||| ||||| |||||||||||| ||||  ||||||||| || ||||||||||| ||||||||    
T  20091196 tcccccagactaggtcagtattggaccgaactggataaataaatt-cgtgtgttctctctttctttttctctcgttgttttctacttttacttgtgtt 20091100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 22137450 - 22137511
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||| |||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||    
T  22137450 ttgattttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgattttt 22137511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 25357141 - 25357230
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattata-agactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||  |||||||||||||||||||   | ||| || ||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  25357141 tttgtaaagaaactcatcattatagtggatcgaagaga-tgatctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 25357230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #71
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 28487753 - 28487822
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| |||||||||||| |||||| || | | |  |||||||||||||| |||||||||||||    
T  28487753 tctcttttgtaacgttactcatcat-atagtgaatcagagggttgctctctcccccagactaggtcaattt 28487822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #72
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 38394363 - 38394432
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  38394363 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 38394432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #73
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 162 - 223
Target Start/End: Original strand, 40552477 - 40552538
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||| |||||||||| ||||| | |||||||||||||||||| | |||||||||||||||||    
T  40552477 ttgattttggttgcttaattatctcttgctccacacatcaagt-tgttattggtgtgattttt 40552538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #74
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 110 - 223
Target Start/End: Original strand, 443908 - 444026
Alignment:
Q  110 tttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagt 203  Q
    ||||| ||||||||||||| ||||||||| |||||| |||||||| |||    ||| ||| | |||||||||||| ||||  ||||||||||||||||||    
T  443908 tttctctctctcgctgttttctacttttggcttgtgattataattgttcaatacactttgtt-ttggttgcttgactattccttgctccacacatcaagt 444006  T
Q  204 attttattggtgtgattttt 223  Q
     | |||||||||||| ||||    
T  444007 ttgttattggtgtgagtttt 444026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #75
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Complemental strand, 1049201 - 1049145
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||| |||||    
T  1049201 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgaattttt 1049145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #76
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 185 - 241
Target Start/End: Complemental strand, 22280266 - 22280209
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtga-ttttttaaggaattcacaataag 241  Q
    |||| |||||||||||||| | |||||||||||| |||||||| ||||||| ||||||    
T  22280266 tttgatccacacatcaagtttattattggtgtgacttttttaacgaattcataataag 22280209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #77
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 40836827 - 40836740
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  40836827 tttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 40836740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 171 - 222
Target Start/End: Complemental strand, 1502883 - 1502832
Alignment:
Q  171 gttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  1502883 gttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 1502832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 2121032 - 2121084
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||  |||||||||||||    
T  2121032 ctgctctctcccccagactaggtcatcattagaccgaattgggtaaacaaatt 2121084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #80
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 7092106 - 7092070
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  7092106 ttgctccacacatcaagtttgttattggtgtgatttt 7092070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #81
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 7094353 - 7094317
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  7094353 ttgctccacacatcaagtttgttattggtgtgatttt 7094317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #82
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 17 - 97
Target Start/End: Complemental strand, 7351725 - 7351647
Alignment:
Q  17 actcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttc 97  Q
    ||||||||| ||||||||||  | | |||||||||||||||||||||||| |  || |||||||| |||| ||||||||||    
T  7351725 actcatcat-atagtggattggagggctgctctctcccccatactaggtc-agattggaccgaactgggtcaacaaatttc 7351647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #83
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 7464568 - 7464516
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||| ||||| |||||||||   ||||||||||| |||||||||||||    
T  7464568 ctgctctcttccccagactaggtcatcattagaccgaactgggtaaacaaatt 7464516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #84
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 7471892 - 7471837
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  7471892 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 7471837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #85
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 9027105 - 9027050
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  9027105 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 9027050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #86
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Original strand, 28487930 - 28487985
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  28487930 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 28487985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #87
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 37412039 - 37411983
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||  ||| |||||||||||||| | |||||||||||| ||||    
T  37412039 ttggttgcttgattattccttgttccacacatcaagtttgttattggtgtgagtttt 37411983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #88
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 44010799 - 44010747
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   |||||||||||  ||||||||||||    
T  44010799 ctgctctctcccccagactaggtcatcattagaccgaacttggtaaacaaatt 44010747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #89
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 44016710 - 44016658
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||  |||||||||||||    
T  44016710 ctgctctctcccccagactaggtcatcattagaccgaattgggtaaacaaatt 44016658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 102; Significance: 2e-50; HSPs: 79)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 4897919 - 4898154
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||| |||||||||||||||||||||||| |||  |   | ||||| ||||||||||||||||||| | || ||| |||| ||||||||||||||  ||    
T  4897919 tctctattgtaaagttactcatcattatagcggaacagtgggctgctttctcccccatactaggtcagtattcgactgaactgggtaaacaaattttttg 4898018  T
Q  101 tgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacacatc 199  Q
    ||||| || ||||||||||||| ||||| ||||||||||||||||||||||||  ||||||||||||||||||| ||||||||  |||||| ||||||||    
T  4898019 tgttc-ctctttctttctctcgttgttttctacttttgcttgtgtttataattgatcccacgttgatattggtttcttgatta-ctttgcttcacacatc 4898116  T
Q  200 aagtattttattggtgtgattttttaaggaattcacaa 237  Q
     |||||||| |||||||||||||| |  ||||||||||    
T  4898117 tagtattttgttggtgtgatttttaaccgaattcacaa 4898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 15445356 - 15445122
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||| ||| | ||||||||| | || ||| |||| ||||||||||||||||||    
T  15445356 tctcttttgtaaagttactcatcattatagtggaacgaagggctgctctcttccc-agactaggtcagtattggactgaactgggtaaacaaatttcgtg 15445258  T
Q  101 tgttctctttttctttctctcgctg-tttcta-cttttgcttgtgtttataattcttc--ccacgttgatattggttgcttgattatttttgctccacac 196  Q
    |||| ||| ||||||||||||| || |||||| ||||||||||||||||||||| |||  |||||||| | ||| ||||||||||| |||||||||||||    
T  15445257 tgttttctctttctttctctcgatgttttctatcttttgcttgtgtttataatt-ttcatccacgttg-ttttgattgcttgatta-ttttgctccacac 15445161  T
Q  197 atcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||||||||  ||||||| ||||||||||    
T  15445160 atcaagtattttattggtgtg--tttttaacgaattcacaa 15445122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 8e-41
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 6661275 - 6661053
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||| ||||| |||||||||||    | |||||||||||||| || |||||||||  ||| |||||||| || |||||||||||||||    
T  6661275 tctcttttgtaaagttgctcataattatagtggaacggatgactgctctctccctcagactaggtcagatttggaccgaactggataaacaaatttcgtg 6661176  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccaca 195  Q
    |||||||||| | ||||||||| || |||||||||||||||||||||||||  |||||   ||| || || |||||||||||||||||  ||||||||||    
T  6661175 tgttctctttct-tttctctcgttgttttctacttttgcttgtgtttataa--cttccatacac-tttattttggttgcttgattattacttgctccaca 6661080  T
Q  196 catcaagtattttattggtgtgatttt 222  Q
    |||||| ||||| ||||||||||||||    
T  6661079 catcaaatatttaattggtgtgatttt 6661053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 83; E-Value: 5e-39
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 15143656 - 15143894
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||        ||||| ||||||| | ||||||||| | || |||||||  ||||||||||||||||||    
T  15143656 tctcttttgtaaagttactcatcattatagtggaacggggagctgctttctcccctagactaggtcagtatttgaccgaaatgggtaaacaaatttcgtg 15143755  T
Q  101 tgttctctttttctttctctcgc---tgtttctac-ttttgcttgtgtttataattcttcccacgttgatattggttgcttgattatttttgctccacac 196  Q
    |||||||| |   ||||||||||   | ||||||| ||||| |||||||||||||| || ||||||| ||||||||||||||||||  ||| ||||||||    
T  15143756 tgttctctctacttttctctcgctattttttctactttttgtttgtgtttataattgtt-ccacgttaatattggttgcttgatta-ctttactccacac 15143853  T
Q  197 atcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| |||||||||||| |||||||| || ||||||||||    
T  15143854 atcaattattttattggtatgatttttcaacgaattcacaa 15143894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 91 - 223
Target Start/End: Complemental strand, 2144569 - 2144437
Alignment:
Q  91 aaatttcgtgtgttctctttttctttctctcgctgttt-ctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttg 188  Q
    |||||| ||||||||||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||| ||| | || ||||||||||||||||      
T  2144569 aaattttgtgtgttctctctttctttctctcgctgttttctacttttgcttgtgtttataattgttacccacattgtt-ttagttgcttgattatttta- 2144472  T
Q  189 ctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||| ||||||||||||||||||||||||    
T  2144471 ctccacacataaagtattttattggtgtgattttt 2144437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 20054025 - 20054251
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||| ||    ||| ||||||||||| ||||||||||||| |||| |||||||| | ||||||||||| |  |    
T  20054025 tctcttttgtaaagttactcatcattatagtagaacggaaggctgctctctcctccatactaggtcagttttggaccgaactgcgtaaacaaattctttt 20054124  T
Q  100 gtgttctctttttc-tttctctc-gctgtttctacttttgcttgtgtttataa--ttcttcccacgttgatattggttgcttgattatt-tttgctccac 194  Q
    ||||||||| |||| ||||||||  |  |||||||||||| ||||||||||||  ||| |  ||| ||| | |||||||||||||||||  |||||| ||    
T  20054125 gtgttctctctttcttttctctcttcgttttctacttttgtttgtgtttataactttcat-acactttg-ttttggttgcttgattattacttgctctac 20054222  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||| |||||||||||    
T  20054223 acatcaagtattttattagtgtgattttt 20054251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 34033656 - 34033424
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaattt-cgt 99  Q
    |||||||||||||||||||||||||||  |||||  |||  |||||||||| ||||  ||||||||| | || || ||||| |||||||||||||| | |    
T  34033656 tctcttttgtaaagttactcatcattactgtggaacatagaactgctctct-cccctgactaggtcagtattggatcgaactgggtaaacaaatttgctt 34033558  T
Q  100 gtgttctctttttctt-tctctcgctgtttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacaca 197  Q
    ||||  ||||| |||| ||||||| ||||   |||||||||||||||||||||| ||  ||||||||||||||||||||| ||||  |||||||||||||    
T  34033557 gtgt--tctttctcttctctctcgttgttataacttttgcttgtgtttataattgttagccacgttgatattggttgctttatta-atttgctccacaca 34033461  T
Q  198 tcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||| |  |||||||||||||| ||||||| ||||||||||    
T  34033460 tcacg--ttttattggtgtga-tttttaatgaattcacaa 34033424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 40221712 - 40221947
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  40221712 tctcttttgtaaagttactcatcattatagtggaacggatggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattatttt 40221810  T
Q  100 gtgttctctttt--------tctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-tt 185  Q
    ||| ||||| ||        ||| |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | |||||||||||| |||  |    
T  40221811 gtgctctctcttcctttctctctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgactatcct 40221909  T
Q  186 ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||| | |||||||||||||||||    
T  40221910 ttgctccacacatcaagtttgttattggtgtgattttt 40221947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 17413256 - 17413114
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||  | | |  |||||||||||||| | | ||||| | || |||||||||         |||||||||    
T  17413256 tctcttttgtaaagttactcatcattatagtggaacagagggatgctctctcccccagagttggtcagtgttggaccgaaca---------aatttcgtg 17413166  T
Q  101 tgttctctttttctttctctcgctgtttctacttttgcttgtgtttataatt 152  Q
    ||| |||| |||||||||| || |||||||||||||||||||||||||||||    
T  17413165 tgtcctctctttctttctcccgttgtttctacttttgcttgtgtttataatt 17413114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 17818579 - 17818352
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| | ||||||  | | | ||  ||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  17818579 tctcttttgtaaagttactcatcat-acagtggaacagagggct--tctctcccccaaactaggtcaa-tttggaccgaactgggtcaacaaattctttt 17818484  T
Q  100 gtgttctctt----tttctttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgc 189  Q
    ||||||||||    ||||| |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | |||||||||||||||||  ||||    
T  17818483 gtgttctcttttcctttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattattccttgc 17818385  T
Q  190 tccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||| | ||||||||||| ||||    
T  17818384 tccacacatcaagtttgttattggtgtggtttt 17818352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 36402417 - 36402186
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |  | | | ||||||||||||||| ||||||||||||| ||| |||||  ||| |||||||| |  |    
T  36402417 tctcttttgtaacgttactcatcat-atagtgaaacagatgtctgctctctcccccagactaggtcaattt-agatcgaactaggtcaacaaattctttt 36402320  T
Q  100 gtgttctctttt-tctttctctcgctgtt----tctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgc 189  Q
    ||||||||| || | ||||||||||||||    ||||||||| |||||||||||||||| |||    ||| ||||| |||||||| |||||||   ||||    
T  36402319 gtgttctctcttctttttctctcgctgttgttttctacttttagcttgtgtttataattgttctatacactttgattttggttgcctgattatcccttgc 36402220  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||| | |||||||||||||||||    
T  36402219 tccacacatcaagtttgttattggtgtgattttt 36402186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 696067 - 696292
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||| |||||||||||||| |    | | ||||||||||||||| || ||||||| ||| |||||||| |||| |||||||| |  |    
T  696067 tctcttttgtaaagttattcatcattatagtgaaacggagggctgctctctcccccagacaaggtcaa-tttggaccgaactgggtcaacaaattatttt 696165  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattgg-ttgcttgattat-ttttgctcca 193  Q
    ||||||||| ||||||||||| | || |||||||||||| |||||||||||| | ||||   ||| || || |||| || ||||||||| | ||||||||    
T  696166 gtgttctctctttctttctct-gttgttttctacttttgtttgtgtttataactgttccatacac-tttattttggttttcttgattatctcttgctcca 696263  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    |||||||||| | |||||||| |||||||    
T  696264 cacatcaagtctgttattggtatgatttt 696292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 43 - 223
Target Start/End: Original strand, 21288992 - 21289177
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gct 139  Q
    ||||||||||||||| |||||||||| |||||||||||| |||| |||||||| |  ||| |||||| |||  |||||||| || ||||||||||| |||    
T  21288992 ctgctctctcccccagactaggtcaa-tttagaccgaactgggtcaacaaattcttttgttttctctcttttgttctctcgttgttttctacttttggct 21289090  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||| ||||||||   ||| ||| | |||||||||||| |||   |||||||||||||||||| |  ||||||||||||||||    
T  21289091 tgtgtttattattcttccatacactttg-ttttggttgcttgactatcccttgctccacacatcaagtttgatattggtgtgattttt 21289177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 36208766 - 36209005
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||||||||||||||||||||||| |      | ||||||| ||||| |||||||||||| ||| |||||||| ||||||||||||| |  |    
T  36208766 tctcttttgtaaagttactcatcattatagtgaaacggcgggctgctctttcccc-atactaggtcaa-tttggaccgaactgggtaaacaaattctttt 36208863  T
Q  100 gtgttctctttttctttctctcgctg-tttctactttt-gcttgtgtttataattcttc---ccacgttgatattggttgcttgattat-ttttgctcca 193  Q
    || |||||| ||||||||||||| || ||||||||||| ||||||| |||||||| |||    ||| ||| | ||||||||||||||||   |||||| |    
T  36208864 gt-ttctctctttctttctctcgttgttttctacttttggcttgtgattataattgttctatacactttg-ttttggttgcttgattatcacttgctcta 36208961  T
Q  194 cacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | |||||| |||||||||| |  ||||||||||    
T  36208962 cacatcaagtttattattgatgtgatttttcatcgaattcacaa 36209005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 126 - 237
Target Start/End: Original strand, 32521386 - 32521495
Alignment:
Q  126 tttctacttttgcttgtgtttataattctt-cccacgttgatattggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||| ||||| || ||||||||||| |  |||||||||||||||||||||||||||  |||||| |||||||||| | ||||||||||||| ||||||    
T  32521386 tttctaattttgtttttgtttataattgtcacccacgttgatattggttgcttgatta-atttgcttcacacatcaaat-ttttattggtgtg-tttttt 32521482  T
Q  225 aaggaattcacaa 237  Q
    |||||||||||||    
T  32521483 aaggaattcacaa 32521495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 43 - 224
Target Start/End: Original strand, 2724124 - 2724312
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttt--tctttctctcgctg-tttctactttt-g 137  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| ||  | ||||| |||||| ||||||||||| |    
T  2724124 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttcctttttctttcgctgttttctacttttgg 2724222  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    ||||||||||||||| ||||   ||| ||| | ||||||||||||||||   |||||  ||||||||||| | ||||||||||||||||||    
T  2724223 cttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctatacacatcaagtttgttattggtgtgatttttt 2724312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 2818424 - 2818194
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | ||||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||| |  |    
T  2818424 tctcttttgtaacgttactcatcat-atagtgaaacggaggactgctctctcccccagactaggtcaa-tttggaccgaacttggtcaacaaattctttt 2818327  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || | ||||||||||||    ||||||||||| |||||||||||||||| ||||   ||| ||||| |||| ||| |||||||   ||||    
T  2818326 gtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgtttataattgttccatacactttgattttggatgcctgattatcccttgc 2818227  T
Q  190 tccacacatcaagtattttattggtgtgatttt 222  Q
    |||| ||||||||| | ||||||||||| ||||    
T  2818226 tccatacatcaagtttgttattggtgtgttttt 2818194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 44 - 157
Target Start/End: Original strand, 20043222 - 20043338
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttc-tttctctcgctg-tttctactttt-gct 139  Q
    ||||||||||| || |||||||||| ||| |||||||| ||||||||||||| |  |||||||||| |||| |||||||||||| ||||||||||| |||    
T  20043222 tgctctctcccacagactaggtcaa-tttggaccgaactgggtaaacaaattcttttgtgttctctctttcttttctctcgctgttttctacttttggct 20043320  T
Q  140 tgtgtttataattcttcc 157  Q
    ||||||||||||| ||||    
T  20043321 tgtgtttataattgttcc 20043338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 43 - 223
Target Start/End: Complemental strand, 10474371 - 10474184
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctc--gctg-tttctactttt-g 137  Q
    |||||||||||||||||||||||||||||  ||||||||  ||| |||||||| |  |||||||||| || |||||||||  |||  ||||||||||| |    
T  10474371 ctgctctctcccccatactaggtcaatttg-gaccgaactaggtcaacaaattcttttgtgttctctcttcctttctctctcgctaatttctacttttcg 10474273  T
Q  138 cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||| ||||   ||| ||| | |||||| ||||||||||  |||||||||||||||||| | |||||| ||| ||||||    
T  10474272 cttgtgtttataattgttccatacactttg-ttttggttacttgattattccttgctccacacatcaagtttattattgatgtaattttt 10474184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 18596835 - 18596994
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||||||||||||    | | ||||||||||| ||| |||||||||| ||| |||||||| |||| |||| ||| |  |    
T  18596835 tctcttttgtaaagttactcatcattatagtggaacggatggctgctctctcctccagactaggtcaa-tttggaccgaactgggtcaacagattctttt 18596933  T
Q  100 gtgttc-tctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc 157  Q
    ||||||  || ||  |||||||||||| |||||||||||| ||||||||||||||| ||||    
T  18596934 gtgttcgactcttcttttctctcgctgttttctacttttgacttgtgtttataattgttcc 18596994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 6745258 - 6745485
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| ||||||||||| ||||||||||   | | ||||||||||||||| || ||||||| ||| |||||||| |||| |||||||| |  |    
T  6745258 tctcttttgtaacgttactcatca-tatagtggatcggagggctgctctctcccccagacaaggtcaa-tttggaccgaactgggtcaacaaattctttt 6745355  T
Q  100 gtgttctctttttc-tttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttg--atattggttgcttgattat-tttt 187  Q
    |||||||||| ||| ||||||||||||    |||| |||||| |||||||||||||||| ||||   ||| |||   | |||| ||||||| ||| | ||    
T  6745356 gtgttctcttattcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtttttttggctgcttgactatctctt 6745455  T
Q  188 gctccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||||| | |||||||||||    
T  6745456 gctccacacatcaagtttgttattggtgtg 6745485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 1 - 222
Target Start/End: Original strand, 9020408 - 9020633
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||| |||||||||||||||||||||   | | ||||||||||| ||| | ||||||  |||| |||||||| || ||||| |||| |  |    
T  9020408 tctcttttgtaaaattactcatcattatagtggatcggatggctgctctctcctccaaattaggtctgttttggaccgaactggataaaccaattctttt 9020507  T
Q  100 gtgttctct-ttttc-tttctctcgct-gtttctacttttgcttgtgtttataa-ttcttcccacgttgatattggttgcttgattatt-tttgctccac 194  Q
    ||||||||| | ||| ||||| ||| |  ||||||||||||||||||||||||| |||    ||| || || |||||||||||||||||  |||||||||    
T  9020508 gtgttctctctcttcttttctatcgttattttctacttttgcttgtgtttataacttcaatacac-tttat-ttggttgcttgattattaattgctccac 9020605  T
Q  195 acatcaagtattttattggtgtgatttt 222  Q
    | ||||| ||||||||| ||||||||||    
T  9020606 agatcaaatattttattcgtgtgatttt 9020633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 217
Target Start/End: Complemental strand, 20505886 - 20505709
Alignment:
Q  48 ctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gcttgtgt 144  Q
    |||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |||||||||| ||  ||||||||| || |||||| |||| ||||||||    
T  20505886 ctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgttctctcttattttctctcgttgttttctagttttggcttgtgt 20505788  T
Q  145 ttataattcttcc---cacgttga--tattggttgcttgattatt-tttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||| ||||   ||| ||||  | |||||||| ||||||||  |||||||||||||||||| | |||||||||||    
T  20505787 ttataattgttccatacactttgattttttggttgcctgattattacttgctccacacatcaagtttgttattggtgtg 20505709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 2954648 - 2954751
Alignment:
Q  44 tgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg-tttctactttt-gctt 140  Q
    |||||||||||||| |||||||||||||| |||||||| |||| |||||||| |  |||||||||| ||  |||||||||||| ||||||||||| ||||    
T  2954648 tgctctctcccccaaactaggtcaatttt-gaccgaactgggtcaacaaattcttttgtgttctctcttcttttctctcgctgttttctacttttggctt 2954746  T
Q  141 gtgtt 145  Q
    |||||    
T  2954747 gtgtt 2954751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 77 - 223
Target Start/End: Original strand, 4754379 - 4754533
Alignment:
Q  77 cgaacagggtaaacaaatttcgtgtgttctctttttctttct--------ctcgctg-tttctacttttgcttgtgtttataattctt-cccacgttgat 166  Q
    ||||| ||||||||||||||||||| |||||| |||||||||        ||| ||  ||||||||||||||||||||||||||| || ||||| || ||    
T  4754379 cgaactgggtaaacaaatttcgtgttttctctctttctttctttccttctctcactactttctacttttgcttgtgtttataattgttacccac-tttat 4754477  T
Q  167 attggttgcttgattatttttgctccacacatcaagtattttattggtgtgattttt 223  Q
     |||||||||||||||  ||| ||||| |||||||  ||||||||| ||||||||||    
T  4754478 tttggttgcttgatta-atttactccaaacatcaaacattttattgatgtgattttt 4754533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 116 - 223
Target Start/End: Complemental strand, 31465962 - 31465849
Alignment:
Q  116 tctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtatttta 209  Q
    ||||||||||||| ||||||||| ||||||||||||||| ||||   ||| ||||| |||||||||| ||||||  ||| |||||||||||| | | |||    
T  31465962 tctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgattttggttgcttaattattccttgttccacacatcaaatttgtta 31465863  T
Q  210 ttggtgtgattttt 223  Q
    ||||||||||||||    
T  31465862 ttggtgtgattttt 31465849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 10529188 - 10529096
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| ||   ||| ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  10529188 tctcttttgtaacgttactcatcat-atagtgaatcggaaggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 10529096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 10587182 - 10587236
Alignment:
Q  168 ttggttgcttgattatttttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||||||||  |||||||||||||||||| | ||||||||||||||||    
T  10587182 ttggttgcttgattatccttgctccacacatcaagtttgttattggtgtgatttt 10587236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26097922 - 26098080
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||  | | | ||||||||||| ||| ||||||||||||| | ||||||| |||| |||||||| |  |    
T  26097922 tctcttttgtaacgttactcatcat-atagtggaacagagg-ctgctctctcctccagactaggtcaatttga-accgaactgggtcaacaaattctttt 26098018  T
Q  100 gtgttctctttttctttc--tctcgctg-tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||||||| || |||||  |||||||| ||||||||||| ||| |||||||||||| ||||    
T  26098019 gtgttctctcttcctttctatctcgctgttttctacttttggctagtgtttataattgttcc 26098080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 1 - 71
Target Start/End: Complemental strand, 31472702 - 31472632
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||||||||||||||||||||||| |    | |  ||||||||||||||||||||||||||||    
T  31472702 tctcttttgtaaagttactcatcattatagtgaaacggagggttgctctctcccccatactaggtcaattt 31472632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 126 - 237
Target Start/End: Complemental strand, 41585697 - 41585582
Alignment:
Q  126 tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatt 220  Q
    |||||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||||||| | |||| ||||||||||||| | ||||||||||||||    
T  41585697 tttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattatctcttgccccacacatcaagtttgttattggtgtgatt 41585599  T
Q  221 ttttaaggaattcacaa 237  Q
    ||| |  ||||||||||    
T  41585598 tttcatcgaattcacaa 41585582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 85 - 150
Target Start/End: Original strand, 42771050 - 42771116
Alignment:
Q  85 gtaaacaaatttcgtgtgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    |||||||||||||||||||||||| ||  ||||||| |||| ||||||| |||||||||||||||||    
T  42771050 gtaaacaaatttcgtgtgttctctcttcatttctcttgctgttttctacctttgcttgtgtttataa 42771116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 1189698 - 1189474
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcc-cccatactaggtcaattttagaccgaacagggtaaacaaatt-tcg 98  Q
    |||||||||||| ||||||||| |||||||||||    | |  |||||||||| |||| |||||||||||||  |||||||| |||| |||||||| |      
T  1189698 tctcttttgtaaggttactcataattatagtggaacggagggatgctctctcctcccagactaggtcaatttg-gaccgaactgggtcaacaaattcttt 1189600  T
Q  99 tgtgttctctttttctttctctc--gctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgct 190  Q
    |||||||||| || |||||||||  || |||| ||||||||| ||||||||||||||| ||||   ||  ||| | ||||| |||||||||||  |||||    
T  1189599 tgtgttctctcttcctttctctctcgcagttttctacttttggcttgtgtttataattgttccatacattttg-ttttggtggcttgattattccttgct 1189501  T
Q  191 ccacacatcaagtattttattggtgtg 217  Q
    ||||||||||||| |  ||||||||||    
T  1189500 ccacacatcaagtttgatattggtgtg 1189474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 24127046 - 24127165
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  24127046 tctcttttgtaaggttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaattctttt 24127143  T
Q  100 gtgttctctttttctttctctc 121  Q
    ||||||||| ||||||||||||    
T  24127144 gtgttctctctttctttctctc 24127165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 110 - 223
Target Start/End: Complemental strand, 26098265 - 26098147
Alignment:
Q  110 tttctttctctcgctgttt-ctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagt 203  Q
    ||||| ||||||||||||| ||||||||| ||||||||||||||| ||||   ||| ||| | |||||||||||||||||  ||||||||||||||||||    
T  26098265 tttctctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttgtt-ttggttgcttgattattccttgctccacacatcaagt 26098167  T
Q  204 attttattggtgtgattttt 223  Q
     |  ||||||||||| ||||    
T  26098166 ttgatattggtgtgagtttt 26098147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 18511301 - 18511146
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||||||||||||||||||||| |||||| |    | | ||||||||||||| | |||||||||| ||| ||||||||  ||| |||||||| |  |    
T  18511301 tctcttttgtaaagttactcatcat-atagtgaaacggagggctgctctctcccctagactaggtcaa-tttggaccgaactaggtcaacaaattctttt 18511204  T
Q  100 gtgttctctttttctttctctcgctg----tttctac-ttttgcttgtgtttataatt 152  Q
    ||||||||| ||  ||||||||||||    ||||||| ||||||||||||||||||||    
T  18511203 gtgttctctcttcttttctctcgctgttgttttctactttttgcttgtgtttataatt 18511146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Original strand, 1170943 - 1171006
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  1170943 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 1171006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 217
Target Start/End: Original strand, 6747498 - 6747721
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgt 103  Q
    |||||||| ||||||| |||| |||||||||   | | |||||||||| | || |||||||||| ||| |||||||| |||| |||||||| |  |||||    
T  6747498 ttttgtaacgttactcgtcat-atagtggatcggagggctgctctctctctcagactaggtcaa-tttggaccgaactgggtcaacaaattcttttgtgt 6747595  T
Q  104 tctctttttc-tttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgt--tgatattggttgcttgattat-ttttgctc 191  Q
    |||||| ||| ||||||||||||    |||| |||||| |||||||||||||||| ||||   ||| |  || | |||||||||||||||| | ||||||    
T  6747596 tctcttcttcttttctctcgctgttgttttcgacttttggcttgtgtttataattgttccatacactttgtgtttttggttgcttgattatctcttgctc 6747695  T
Q  192 cacacatcaagtattttattggtgtg 217  Q
     ||||||||||| | |||||||||||    
T  6747696 tacacatcaagtttgttattggtgtg 6747721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 103 - 237
Target Start/End: Complemental strand, 34530700 - 34530561
Alignment:
Q  103 ttctctttttctttctctcgctgtt-tctacttttg-cttgtgtttataattcttccc-acg-ttgatattggttgcttgattattt-ttgctccacaca 197  Q
    |||||| ||||||||| | |||||| |||||||||| ||||||||||||||| ||||  ||| ||  | ||||||||||||||||   |||||| |||||    
T  34530700 ttctctctttctttctgttgctgttgtctacttttgacttgtgtttataattgttccatacgctttgttttggttgcttgattatcacttgctcgacaca 34530601  T
Q  198 tcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||| | ||||||||||||||||| |  ||||||||||    
T  34530600 tcaagtttgttattggtgtgatttttcatcgaattcacaa 34530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 35385501 - 35385438
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  35385501 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 35385438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 4236819 - 4236888
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||||||    
T  4236819 tctcttttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccaaactaggtcaattt 4236888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 41 - 157
Target Start/End: Original strand, 25904332 - 25904452
Alignment:
Q  41 gactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctt--tctctcgctg-tttctactttt 136  Q
    ||||||||||||||||| |||||||||| ||| ||||||||  ||| |||||||| |  |||||||||| || |||  |||||||||| |||||||||||    
T  25904332 gactgctctctcccccagactaggtcaa-tttggaccgaactaggtcaacaaattattttgtgttctctcttcctttctctctcgctgttttctactttt 25904430  T
Q  137 -gcttgtgtttataattcttcc 157  Q
     | |||||||||||||| ||||    
T  25904431 ggtttgtgtttataattgttcc 25904452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 95
Target Start/End: Original strand, 27912726 - 27912818
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| | |||||||||| ||||||||  | |  |||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  27912726 tctcttttgtaacgatactcatcat-atagtggaacagagaactgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 27912818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 42 - 95
Target Start/End: Original strand, 28786536 - 28786589
Alignment:
Q  42 actgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  28786536 actgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 28786589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 34477137 - 34477050
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  34477137 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 34477050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 34479502 - 34479415
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  34479502 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 34479415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 35430571 - 35430616
Alignment:
Q  192 cacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||| | |||||||||||||||||||||| ||||||||||    
T  35430571 cacacatcaaatcttttattggtgtgattttttaacgaattcacaa 35430616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 185 - 237
Target Start/End: Complemental strand, 5777672 - 5777620
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||| |||||||||| |||||||||| || ||||| ||||    
T  5777672 tttgctccacacatcaaatattttattgatgtgatttttaaacgaatttacaa 5777620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 152
Target Start/End: Original strand, 6756723 - 6756836
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaa---tttcgtgtgttctctttttctttctctcgctg-tttctactttt-g 137  Q
    ||||||||||||||| |||||||||| ||| |||||||| | || ||||||   ||| ||||  |||||| || | |||||||||| ||||||||||| |    
T  6756723 ctgctctctcccccaaactaggtcaa-tttggaccgaactgagtcaacaaaatcttttgtgttctctcttcttttctctctcgctgttttctacttttgg 6756821  T
Q  138 cttgtgtttataatt 152  Q
    |||||||||||||||    
T  6756822 cttgtgtttataatt 6756836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 186 - 234
Target Start/End: Original strand, 16776541 - 16776589
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgattttttaaggaattca 234  Q
    |||||||||||||||||| | ||||||||||||||||| || |||||||    
T  16776541 ttgctccacacatcaagtttgttattggtgtgatttttcaatgaattca 16776589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 17841298 - 17841246
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  17841298 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 17841246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 22672967 - 22673019
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  22672967 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 22673019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 25445629 - 25445681
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  25445629 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 25445681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 39854673 - 39854905
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| | |||||||||| |||||||||   | | ||||||||||||||| ||||| |||| ||| ||||||||  ||| |||||||| |  |    
T  39854673 tctcttttgtaacgctactcatcat-atagtggatcggagggctgctctctcccccagactagatcaa-tttggaccgaactaggtcaacaaattctttt 39854770  T
Q  100 gtgttctctttt--tctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttg 188  Q
    ||||||||| ||  | ||||||||||||    ||| ||||||| |||||||||||||||| ||||   ||| ||  | |||||||||| | |||   |||    
T  39854771 gtgttctctcttcctttttctctcgctgttgttttttacttttggcttgtgtttataattgttccatacactttatttttggttgcttaactatcccttg 39854870  T
Q  189 ctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||| ||||||| | |||||||||||||||||    
T  39854871 ctccacatatcaagtttattattggtgtgattttt 39854905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 42238393 - 42238445
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  42238393 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 42238445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 168 - 222
Target Start/End: Original strand, 38882455 - 38882509
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||||||    
T  38882455 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttt 38882509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 168 - 237
Target Start/End: Original strand, 18469376 - 18469446
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||| |||||||| |  ||||||||||    
T  18469376 ttggttgcttgattatcccttgctccacacatcaagtttgttattggtatgatttttcatcgaattcacaa 18469446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 43 - 152
Target Start/End: Complemental strand, 18509366 - 18509252
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgtgtgttctctttttctttctctcgctg----tttctactttt- 136  Q
    ||||||||||||| | ||||||||||||| | |||||||  ||| |||||||| |  |||||||||| ||  ||||||||||||    |||||||||||     
T  18509366 ctgctctctcccctagactaggtcaatttga-accgaactaggtcaacaaattcttttgtgttctctcttcttttctctcgctgttgttttctacttttg 18509268  T
Q  137 gcttgtgtttataatt 152  Q
    ||||||||||||||||    
T  18509267 gcttgtgtttataatt 18509252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 21 - 95
Target Start/End: Original strand, 25452606 - 25452680
Alignment:
Q  21 atcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| | |   ||||||||||||||| | |||||||   ||||||||||| |||||||||||||    
T  25452606 atcattatagtggatcagagagctgctctctcccccagaataggtcatcattagaccgaactgggtaaacaaatt 25452680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 25921562 - 25921470
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| ||||||||    |   ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  25921562 tctcttttgtaacgttactcatcat-atagtggaacggagagctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 25921470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41585833 - 41585741
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  41585833 tctcttttgtaatgttactcatcat-atagtgaaacggagggctgctctctcccccaaactaggtcaa-tttggaccgaactgggtcaacaaatt 41585741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 2175113 - 2175200
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||| ||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  2175113 tttgtaacgttacttatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 2175200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 224
Target Start/End: Original strand, 25804391 - 25804447
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||||| | |||||||||||||||||| | ||||||||||||| ||||    
T  25804391 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatatttt 25804447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 168 - 240
Target Start/End: Original strand, 27912903 - 27912976
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaataa 240  Q
    ||||||||||||||||   || ||||||||||||||| | ||||||||| ||||||| |  |||||||||||||    
T  27912903 ttggttgcttgattatcccttactccacacatcaagtttgttattggtgggatttttcatcgaattcacaataa 27912976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 34476970 - 34476910
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||    
T  34476970 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 34476910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 162 - 222
Target Start/End: Complemental strand, 34479335 - 34479275
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||||    
T  34479335 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttt 34479275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 34530755 - 34530722
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||| |||||||||||||||||    
T  34530755 tctcttttgtaaagttgctcatcattatagtgga 34530722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Original strand, 38882300 - 38882387
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   | | ||||||||||| ||| |||||||||| ||| |||||||| |||| ||||||||    
T  38882300 tttgtaacgttactcatcat-atagtggatcggagggctgctctctcctccagactaggtcaa-tttggaccgaactgggtcaacaaatt 38882387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 2144647 - 2144619
Alignment:
Q  6 tttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||||||||||||||||    
T  2144647 tttgtaaagttactcatcattatagtgga 2144619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Complemental strand, 3373054 - 3372979
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| |||||||||| |||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  3373054 ttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 3372979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 11962482 - 11962430
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||| || ||||||||||||   ||||||||||| |||||||||||||    
T  11962482 ctgctctcttcctcatactaggtcatcattagaccgaactgggtaaacaaatt 11962430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 12555830 - 12555774
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||  |||||||||||||||| | | |||||||||||| ||||    
T  12555830 ttggttgcttgattattccttgctccacacatcaaatttgttattggtgtgagtttt 12555774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 18466915 - 18466966
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  18466915 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 18466966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 21684500 - 21684449
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  21684500 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 21684449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #75
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 25445770 - 25445802
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||||| ||||||||||||||||||||||    
T  25445770 tttgctccacgcatcaagtattttattggtgtg 25445802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #76
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 217
Target Start/End: Original strand, 25452769 - 25452801
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtg 217  Q
    |||||||||| ||||||||||||||||||||||    
T  25452769 tttgctccacgcatcaagtattttattggtgtg 25452801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #77
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 185 - 224
Target Start/End: Complemental strand, 26406375 - 26406338
Alignment:
Q  185 tttgctccacacatcaagtattttattggtgtgatttttt 224  Q
    |||||||||||||||||  |||||||||||||||||||||    
T  26406375 tttgctccacacatcaa--attttattggtgtgatttttt 26406338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #78
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 6 - 34
Target Start/End: Original strand, 35430375 - 35430403
Alignment:
Q  6 tttgtaaagttactcatcattatagtgga 34  Q
    |||||||||||||||||||||||||||||    
T  35430375 tttgtaaagttactcatcattatagtgga 35430403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #79
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 168 - 223
Target Start/End: Complemental strand, 38960043 - 38959988
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  38960043 ttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgattttt 38959988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0468 (Bit Score: 93; Significance: 5e-45; HSPs: 1)
Name: scaffold0468
Description:

Target: scaffold0468; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 1732 - 1509
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||||||||||   || | ||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||    
T  1732 tctcttttgtaaagttactcatcattatagtggaacgtagggctgctctctcccccatactaggtcagtttttgaccgaactgggtaaacaaatttcgtg 1633  T
Q  101 tgttctctttttc-tttctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctcca 193  Q
    |||||||| |||| ||||||||  || ||||||||||| ||||||||||||||  |||||   ||| |||   |||||||||||||||||  ||||||||    
T  1632 tgttctctctttcttttctctcattgttttctacttttggcttgtgtttataa--cttccatacactttg--tttggttgcttgattattacttgctcca 1537  T
Q  194 cacatcaagtattttattggtgtgatttt 222  Q
    |||||||| || |||||||||||||||||    
T  1536 cacatcaaata-tttattggtgtgatttt 1509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 72; Significance: 2e-32; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 85429 - 85657
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    ||||||| ||||||||||||||||||||||||||    | ||||||||||||||||| ||||||||||||| | || ||||  |||||||||||| |  |    
T  85429 tctctttcgtaaagttactcatcattatagtggaacggatgactgctctctcccccagactaggtcaatttga-actgaaccaggtaaacaaattctttt 85527  T
Q  100 gtgttctctttttctttctctcgctg-tttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcca 193  Q
    ||||||||| ||  ||||||||| || |||||||||||| ||||||||||||||| ||||   ||| ||||| ||||||| |||||||| | ||||||||    
T  85528 gtgttctctcttcttttctctcgttgttttctacttttgacttgtgtttataattgttccatacactttgattttggttgtttgattatctcttgctcca 85627  T
Q  194 cacatcaagtattttattggtgtgattttt 223  Q
    ||||| |||  | |||||||||||||||||    
T  85628 cacattaagattgttattggtgtgattttt 85657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0224 (Bit Score: 67; Significance: 2e-29; HSPs: 1)
Name: scaffold0224
Description:

Target: scaffold0224; HSP #1
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 15911 - 15761
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    ||||||||||||||||||||||||||| ||||||    | ||||||||||| ||||  ||||||||| | || |||||||| |||||||||||||| |||    
T  15911 tctcttttgtaaagttactcatcattagagtggaacggaggactgctctctgcccccgactaggtcagtgttggaccgaactgggtaaacaaattttgtg 15812  T
Q  101 tgttctctttttctttctctcgctg-tttctacttttgcttgtgtttataa 150  Q
    |||| ||| |||||||||| || || |||||||||||| ||||||||||||    
T  15811 tgttatctctttctttctcccgttgttttctacttttgtttgtgtttataa 15761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 65; Significance: 3e-28; HSPs: 1)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 1 - 223
Target Start/End: Complemental strand, 16740 - 16516
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||||||||||||||||||||||||   | | |  |  ||||||||||| || |||||| |||| |||||||| |||||||||||||| |||    
T  16740 tctcttttgtaaagttactcatcattatagtgggacaaagggtttatctctcccccagaccaggtcagttttggaccgaactgggtaaacaaattttgtg 16641  T
Q  101 tgttctctttttc-tttctctcgctg-tttctacttttgcttgtgtttataattcttcc---cacgttgatattggttgcttgattatt-tttgctccac 194  Q
    |||| ||| |||| ||||||||| || |||||| |||||||||| |||||||  |||||   ||| |||   || ||||||||||||||  |||||||||    
T  16640 tgttttctctttcttttctctcgttgttttctatttttgcttgtatttataa--cttccatgcactttg--tttagttgcttgattattacttgctccac 16545  T
Q  195 acatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||||||||| | ||||||    
T  16544 acatcaagtattttattggtataattttt 16516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 57; Significance: 2e-23; HSPs: 2)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 1 - 222
Target Start/End: Complemental strand, 14471 - 14247
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtg 100  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||| | |||||||||| ||| |||||||| |||| |||||| ||| ||    
T  14471 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccctagactaggtcaa-tttggaccgaactgggtcaacaaa-ttcttg 14375  T
Q  101 tgttctctttttctt--tctctcgctg-tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgctcc 192  Q
    |||||||| || |||  |||||||||| ||||||||||| |||||||||||||||| ||||   ||| ||| | ||||||||||||||||   |||||||    
T  14374 tgttctctcttcctttctctctcgctgttttctacttttggcttgtgtttataattgttccatacactttg-ttttggttgcttgattatcccttgctcc 14276  T
Q  193 acacatcaagtattttattggtgtgatttt 222  Q
    ||||||||||| | ||||||||||||||||    
T  14275 acacatcaagt-tgttattggtgtgatttt 14247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 15218 - 15287
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattt 71  Q
    |||||||||||||||||||||||| |||||||||    ||| ||||| |||||||||| ||||||||||||    
T  15218 tctcttttgtaaagttactcatca-tatagtggaacggaaggctgctgtctcccccatgctaggtcaattt 15287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0133 (Bit Score: 53; Significance: 4e-21; HSPs: 1)
Name: scaffold0133
Description:

Target: scaffold0133; HSP #1
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 5 - 239
Target Start/End: Original strand, 5014 - 5247
Alignment:
Q  5 ttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgtt 104  Q
    |||||||||| |||||||||||||||||||  |||  |||||||||| ||||| ||||||||| | || |||||||  ||||||| ||| ||   |||||    
T  5014 ttttgtaaagatactcatcattatagtggaacatagaactgctctctgccccagactaggtcagtattggaccgaattgggtaaaaaaaatt---gtgtt 5110  T
Q  105 ctctttttctttctctcgctgtttctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatc 199  Q
    |||| |||||| |||||||||||| |||||||| |||| ||||||||  | |||   ||| || || ||| |||||||||||||  ||| |  | |||||    
T  5111 ctctctttcttcctctcgctgtttttacttttggcttgcgtttataa--cgtccatacacttttattttg-ttgcttgattattacttgtttgatacatc 5207  T
Q  200 aagtattttattggtgtgattttttaaggaattcacaata 239  Q
    |||||||||| ||||||||||||| |  ||||||||||||    
T  5208 aagtattttaatggtgtgatttttcattgaattcacaata 5247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0031 (Bit Score: 47; Significance: 1e-17; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 79384 - 79615
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||    | | ||||||||||||||| |||||||||| ||| |||| ||| |||| |||||||| |  |    
T  79384 tctcttttgtaacgttactcatcat-atagtggaacggagggctgctctctcccccagactaggtcaa-tttggaccaaactgggtcaacaaattatttt 79481  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc---cacgttgatattggttgcttgattat-ttttgc 189  Q
    ||||||||| || | ||||||| ||||    ||||||||||| ||||||| |||||||| ||||   ||| ||||| |||||||| | |||||   ||||    
T  79482 gtgttctctcttctttttctcttgctgttgttttctacttttggcttgtgattataattgttccatacactttgattttggttgcctaattatcccttgc 79581  T
Q  190 tccacacatcaagtattttattggtgtgattttt 223  Q
    |||||||||||||| | |||||||||||||||||    
T  79582 tccacacatcaagtttgttattggtgtgattttt 79615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11562 - 11401
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| ||||||||||  |   ||||||||||||||| |||||||||| ||| |||||||| |||| |||||||| |  |    
T  11562 tctcttttgtaacgttactcatcat-atagtggattggagagctgctctctcccccagactaggtcaa-tttggaccgaaccgggtcaacaaattctttt 11465  T
Q  100 gtgttctct-ttttctttctctcgctg----tttctactttt-gcttgtgtttataattcttcc 157  Q
    ||||||||| || | ||||||||||||    ||||||||||| ||||||| |||||||| ||||    
T  11464 gtgttctctcttctttttctctcgctgttgttttctacttttggcttgtgattataattgttcc 11401  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 80058 - 80283
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt-tcgt 99  Q
    |||||||||||| |||||||||||| |||||| |    | | ||||||||||||||| |||||||||||||  ||  |||| |||| |||||||| |  |    
T  80058 tctcttttgtaacgttactcatcat-atagtgaaacggagggctgctctctcccccagactaggtcaatttg-gattgaactgggtcaacaaattctttt 80155  T
Q  100 gtgttctctttttcttt-ctctcgctgtt----tctacttttg-cttgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgc 189  Q
    ||| ||||| || |||| |||||||||||    |||||||||| ||||||||||||||| ||||   ||| ||||| || ||||| ||||||||  ||||    
T  80156 gtgatctctcttccttttctctcgctgttgttttctacttttggcttgtgtttataatttttccatacactttgattttcgttgcctgattattacttgc 80255  T
Q  190 tccacacatcaagtattttattggtgtg 217  Q
    |||||||||||||| | |||||||||||    
T  80256 tccacacatcaagtttgttattggtgtg 80283  T

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Target: scaffold0256 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0256
Description:

Target: scaffold0256; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 43 - 121
Target Start/End: Original strand, 16458 - 16534
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctc 121  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || |||||  ||||||||||||||||    
T  16458 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgt--tctttttctttctctc 16534  T

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Target: scaffold1050 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold1050
Description:

Target: scaffold1050; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 43 - 106
Target Start/End: Complemental strand, 3119 - 3056
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttct 106  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||| || ||||||||    
T  3119 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatatcttgtgttct 3056  T

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Target: scaffold1674 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1674
Description:

Target: scaffold1674; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 237
Target Start/End: Complemental strand, 1363 - 1294
Alignment:
Q  168 ttggttgcttgattat-ttttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    |||||||||||||||| |||| ||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  1363 ttggttgcttgattatctttttctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 1294  T

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Target: scaffold0370 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0370
Description:

Target: scaffold0370; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 168 - 225
Target Start/End: Complemental strand, 1364 - 1307
Alignment:
Q  168 ttggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgatttttta 225  Q
    |||||||||||||||| | |||||||||||||||||| | |||||||||||||||||||    
T  1364 ttggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgatttttta 1307  T

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Target: scaffold0370; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 1537 - 1450
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| | |||||||||| |||||||||   | | ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  1537 tttgtaacgatactcatcat-atagtggatcggagggctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 1450  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000008; HSPs: 3)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 50257 - 50441
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-----tttctacttttg-ct 139  Q
    |||||||||||| |||||||||||||  |||| ||| |||| |||||||| | ||||||||  | |||||| |||| ||      |||||||||||| ||    
T  50257 ctctctcccccagactaggtcaatttg-gacctaactgggtcaacaaatt-cttgtgttcttctcttctttttctctctagttgttttctacttttggct 50354  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| || |   ||| ||| | ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  50355 tgtgtttataattgtttcatacactttgtt-ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 50441  T

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Target: scaffold0005; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 46 - 223
Target Start/End: Original strand, 52256 - 52440
Alignment:
Q  46 ctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatttcgtgtgttctctttttctttctctcgctg-----tttctacttttg-ct 139  Q
    |||||||||||| |||||||||||||  |||| ||| |||| |||||||| | ||||||||  | |||||| |||| ||      |||||||||||| ||    
T  52256 ctctctcccccagactaggtcaatttg-gaccaaactgggtcaacaaatt-cttgtgttcttctcttctttttctctctagttgttttctacttttggct 52353  T
Q  140 tgtgtttataattcttcc---cacgttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttt 223  Q
    ||||||||||||| || |   ||| ||| | ||||||||||||||||   |||||||||||||||||| | |||||||||||||||||    
T  52354 tgtgtttataattgtttcatacactttgtt-ttggttgcttgattatcccttgctccacacatcaagtttgttattggtgtgattttt 52440  T

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Target: scaffold0005; HSP #3
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 170 - 221
Target Start/End: Complemental strand, 183551 - 183500
Alignment:
Q  170 ggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattt 221  Q
    |||||||||||||| | |||||||||||||||||| | |||||||||||||||    
T  183551 ggttgcttgattatctcttgctccacacatcaagt-tgttattggtgtgattt 183500  T

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Target: scaffold0267 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0267
Description:

Target: scaffold0267; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 396 - 471
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| ||||||||||||||||   |||||||||||||||||| | ||||||||||||||| | || ||||||||||    
T  396 ttgattttggttgcttgattatcccttgctccacacatcaagt-tgttattggtgtgatttctcaacgaattcacaa 471  T

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Target: scaffold0209 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 43 - 95
Target Start/End: Complemental strand, 17035 - 16983
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||   ||||||||||| |||||||||||||    
T  17035 ctgctctctcccccagactaggtcatcattagaccgaactgggtaaacaaatt 16983  T

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Target: scaffold0038 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 95
Target Start/End: Complemental strand, 41572 - 41480
Alignment:
Q  1 tctcttttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    |||||||||||| |||||||||||| |||||| ||   | | ||||||||||||||| ||||||| || ||| |||||||| |||| ||||||||    
T  41572 tctcttttgtaacgttactcatcat-atagtgaatcggagggctgctctctcccccagactaggtgaa-tttggaccgaactgggtcaacaaatt 41480  T

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Target: scaffold0025 (Bit Score: 30; Significance: 0.0000002; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 6 - 95
Target Start/End: Complemental strand, 69376 - 69289
Alignment:
Q  6 tttgtaaagttactcatcattatagtggattataagactgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||| |||||||||||| |||||||||   |   ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  69376 tttgtaacgttactcatcat-atagtggatcggagagctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 69289  T

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Target: scaffold0025; HSP #2
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 186 - 222
Target Start/End: Complemental strand, 69185 - 69149
Alignment:
Q  186 ttgctccacacatcaagtattttattggtgtgatttt 222  Q
    |||||||||||||||||| | ||||||||||||||||    
T  69185 ttgctccacacatcaagtttgttattggtgtgatttt 69149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0472 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 162 - 237
Target Start/End: Original strand, 6569 - 6644
Alignment:
Q  162 ttgatattggttgcttgattattt-ttgctccacacatcaagtattttattggtgtgattttttaaggaattcacaa 237  Q
    ||||| |||||||||| |||||   |||||||||||||||||| | ||||||||||||||||| |  ||||||||||    
T  6569 ttgattttggttgcttaattatcccttgctccacacatcaagt-tgttattggtgtgatttttcatcgaattcacaa 6644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 43 - 95
Target Start/End: Original strand, 29410 - 29461
Alignment:
Q  43 ctgctctctcccccatactaggtcaattttagaccgaacagggtaaacaaatt 95  Q
    ||||||||||||||| |||||||||| ||| |||||||| |||| ||||||||    
T  29410 ctgctctctcccccagactaggtcaa-tttggaccgaactgggtcaacaaatt 29461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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