View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8479_1D_low_7 (Length: 330)
Name: NF8479_1D_low_7
Description: NF8479_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8479_1D_low_7 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 311; Significance: 1e-175; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 311; E-Value: 1e-175
Query Start/End: Original strand, 12 - 330
Target Start/End: Original strand, 30995225 - 30995543
Alignment:
| Q |
12 |
atgaagggttacatgaaggacaattactctagactccatcaaagctactttaaataaagcattgtttatttcatcagtggtgagttgatcaggtctaaga |
111 |
Q |
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| T |
30995225 |
atgaagggttacatgaaggacaattactctagactccatcaaagctaccttaaataatgcattgtttatttcatcagtggtgagttgatcaggtctaaga |
30995324 |
T |
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| Q |
112 |
gctgctttatatgatattttactatgtttctctgctagcttatcacctaatgcagctatcccatttcttccatgatcatcatctatgaaaattgctatca |
211 |
Q |
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| T |
30995325 |
gctgctttatatgatattttactatgtttctctgctagcttatcacctaatgcagctatcccatttcttccatgatcatcatctatgaaaattgctatca |
30995424 |
T |
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| Q |
212 |
catctctccattgaaaatggtcaacaatgtctgccacagcagccatttgattcagatcactctgtgttgtcctaacaaaatatgggaactctagtgaagt |
311 |
Q |
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| T |
30995425 |
catctctccattgaaaatggtcaacaatgtctgccacagcagccatttgattcagatcactctgtgttgtcctaacaaaatatgggaactctagtgaagt |
30995524 |
T |
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| Q |
312 |
tagtgttggatctgttgct |
330 |
Q |
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| T |
30995525 |
tagtgttggatctgttgct |
30995543 |
T |
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