View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8483_low_1 (Length: 803)

Name: NF8483_low_1
Description: NF8483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8483_low_1
NF8483_low_1
[»] chr6 (18 HSPs)
chr6 (1-251)||(17905031-17905278)
chr6 (332-566)||(17905361-17905595)
chr6 (626-789)||(17905655-17905818)
chr6 (622-789)||(1394107-1394274)
chr6 (449-566)||(9829291-9829408)
chr6 (449-566)||(29202765-29202882)
chr6 (452-565)||(1394331-1394445)
chr6 (449-566)||(25068563-25068680)
chr6 (444-541)||(34294597-34294694)
chr6 (449-541)||(17203568-17203660)
chr6 (449-541)||(4099555-4099647)
chr6 (449-565)||(4810681-4810798)
chr6 (622-698)||(29202633-29202709)
chr6 (477-541)||(26831809-26831873)
chr6 (449-495)||(6036588-6036634)
chr6 (449-525)||(23622963-23623039)
chr6 (500-539)||(809696-809735)
chr6 (490-541)||(32207949-32208000)
[»] scaffold0013 (4 HSPs)
scaffold0013 (622-789)||(104725-104892)
scaffold0013 (622-789)||(127374-127541)
scaffold0013 (449-566)||(104948-105066)
scaffold0013 (449-555)||(127608-127716)
[»] chr4 (40 HSPs)
chr4 (622-792)||(24050682-24050852)
chr4 (625-781)||(29968320-29968476)
chr4 (622-789)||(41851041-41851208)
chr4 (622-789)||(2479206-2479373)
chr4 (622-745)||(18000452-18000575)
chr4 (447-566)||(32010480-32010599)
chr4 (624-781)||(47427951-47428108)
chr4 (446-566)||(12795490-12795610)
chr4 (449-566)||(2479032-2479150)
chr4 (447-566)||(29968535-29968654)
chr4 (449-566)||(48076733-48076850)
chr4 (447-566)||(8478512-8478631)
chr4 (449-566)||(47427776-47427894)
chr4 (449-566)||(37325267-37325384)
chr4 (458-566)||(24050908-24051016)
chr4 (449-541)||(52688589-52688681)
chr4 (449-555)||(23952124-23952229)
chr4 (449-566)||(47769326-47769443)
chr4 (622-781)||(10466778-10466938)
chr4 (449-541)||(28379295-28379387)
chr4 (449-566)||(36639720-36639841)
chr4 (454-541)||(2177814-2177901)
chr4 (449-544)||(8119275-8119370)
chr4 (449-566)||(14989313-14989430)
chr4 (452-541)||(44500928-44501017)
chr4 (449-541)||(54652882-54652974)
chr4 (449-532)||(18000253-18000336)
chr4 (453-540)||(22293666-22293753)
chr4 (449-541)||(28813899-28813991)
chr4 (465-541)||(4942377-4942453)
chr4 (465-541)||(53143031-53143107)
chr4 (449-529)||(8396884-8396965)
chr4 (481-541)||(52688741-52688801)
chr4 (453-541)||(7822290-7822382)
chr4 (477-563)||(41850895-41850982)
chr4 (464-566)||(21580847-21580949)
chr4 (505-561)||(10466991-10467049)
chr4 (449-521)||(15464994-15465066)
chr4 (449-541)||(7812812-7812900)
chr4 (501-555)||(32962629-32962683)
[»] chr5 (26 HSPs)
chr5 (622-789)||(14164380-14164547)
chr5 (627-783)||(19123255-19123411)
chr5 (638-789)||(31486178-31486329)
chr5 (446-564)||(10409897-10410015)
chr5 (447-566)||(14164203-14164324)
chr5 (449-566)||(41092268-41092385)
chr5 (654-762)||(23141156-23141264)
chr5 (449-566)||(7672744-7672861)
chr5 (444-541)||(41511677-41511774)
chr5 (449-566)||(43394566-43394683)
chr5 (451-566)||(16529324-16529439)
chr5 (449-566)||(16538163-16538280)
chr5 (636-781)||(31487192-31487336)
chr5 (449-566)||(7129171-7129290)
chr5 (449-566)||(19123472-19123587)
chr5 (452-566)||(26522712-26522826)
chr5 (447-544)||(19322760-19322857)
chr5 (459-566)||(38004044-38004150)
chr5 (447-541)||(38110580-38110674)
chr5 (449-566)||(23141338-23141458)
chr5 (454-541)||(20563299-20563386)
chr5 (449-541)||(16306099-16306191)
chr5 (449-540)||(12441618-12441709)
chr5 (460-541)||(9487342-9487423)
chr5 (516-565)||(35160074-35160123)
chr5 (622-660)||(7129080-7129118)
[»] chr1 (35 HSPs)
chr1 (622-789)||(38685495-38685661)
chr1 (622-789)||(5429398-5429569)
chr1 (622-762)||(21882576-21882716)
chr1 (634-789)||(23480841-23480996)
chr1 (447-566)||(27296693-27296812)
chr1 (449-566)||(28949507-28949624)
chr1 (444-565)||(1155670-1155791)
chr1 (449-563)||(48411583-48411697)
chr1 (449-541)||(21618804-21618896)
chr1 (449-560)||(24595594-24595705)
chr1 (449-537)||(12116073-12116161)
chr1 (449-541)||(16165190-16165282)
chr1 (449-541)||(25931334-25931426)
chr1 (444-544)||(44451661-44451761)
chr1 (447-541)||(3226479-3226573)
chr1 (449-566)||(5429625-5429743)
chr1 (447-541)||(39282396-39282490)
chr1 (468-566)||(44099244-44099341)
chr1 (449-541)||(1648260-1648352)
chr1 (449-541)||(4099892-4099984)
chr1 (449-541)||(44264518-44264610)
chr1 (458-566)||(51114278-51114386)
chr1 (449-541)||(47791410-47791502)
chr1 (476-566)||(38685717-38685808)
chr1 (446-544)||(18913109-18913207)
chr1 (449-541)||(52407480-52407572)
chr1 (449-566)||(42491593-42491711)
chr1 (477-566)||(21882746-21882836)
chr1 (474-566)||(23480684-23480777)
chr1 (445-526)||(52741033-52741114)
chr1 (449-565)||(318981-319095)
chr1 (449-541)||(6537107-6537199)
chr1 (481-541)||(21618684-21618744)
chr1 (447-541)||(45416852-45416946)
chr1 (476-521)||(46533409-46533454)
[»] scaffold0059 (2 HSPs)
scaffold0059 (622-789)||(71173-71340)
scaffold0059 (449-555)||(70582-70689)
[»] chr7 (46 HSPs)
chr7 (624-789)||(9141166-9141331)
chr7 (622-762)||(22967912-22968052)
chr7 (447-566)||(2354040-2354159)
chr7 (638-789)||(11642313-11642464)
chr7 (622-789)||(16375611-16375778)
chr7 (449-566)||(16673877-16673995)
chr7 (449-566)||(17648245-17648363)
chr7 (449-566)||(4681240-4681356)
chr7 (449-566)||(12140470-12140587)
chr7 (449-566)||(22773520-22773637)
chr7 (449-566)||(30991648-30991765)
chr7 (449-561)||(40409174-40409285)
chr7 (449-544)||(32277651-32277746)
chr7 (654-789)||(45286509-45286648)
chr7 (449-566)||(2852829-2852946)
chr7 (623-716)||(6250271-6250364)
chr7 (449-566)||(11650157-11650274)
chr7 (449-566)||(45418299-45418416)
chr7 (452-566)||(4680517-4680631)
chr7 (449-566)||(9396334-9396451)
chr7 (446-566)||(16362172-16362292)
chr7 (449-541)||(22325016-22325108)
chr7 (449-566)||(9140990-9141108)
chr7 (449-541)||(21128795-21128887)
chr7 (452-544)||(34838251-34838343)
chr7 (447-566)||(35125481-35125601)
chr7 (449-544)||(40449365-40449460)
chr7 (449-566)||(6250421-6250538)
chr7 (452-541)||(1565954-1566043)
chr7 (447-541)||(18487919-18488013)
chr7 (451-541)||(21225056-21225146)
chr7 (622-696)||(48639191-48639265)
chr7 (456-566)||(48639025-48639134)
chr7 (622-702)||(35125345-35125425)
chr7 (477-566)||(22967792-22967882)
chr7 (449-538)||(5553564-5553653)
chr7 (449-526)||(27711938-27712015)
chr7 (474-541)||(16375462-16375529)
chr7 (474-541)||(40686182-40686249)
chr7 (476-541)||(16491641-16491706)
chr7 (474-561)||(11642168-11642256)
chr7 (683-762)||(45418504-45418581)
chr7 (476-541)||(24787383-24787448)
chr7 (721-757)||(48639471-48639507)
chr7 (622-652)||(16673790-16673820)
chr7 (622-652)||(17648158-17648188)
[»] chr8 (35 HSPs)
chr8 (622-762)||(604039-604179)
chr8 (623-789)||(1199596-1199761)
chr8 (622-762)||(44429649-44429789)
chr8 (622-789)||(30437016-30437183)
chr8 (622-762)||(44434406-44434546)
chr8 (622-789)||(1851125-1851292)
chr8 (622-789)||(1852271-1852437)
chr8 (453-566)||(42046033-42046146)
chr8 (451-566)||(37197296-37197411)
chr8 (622-768)||(44433379-44433524)
chr8 (449-566)||(30436842-30436960)
chr8 (449-566)||(1199818-1199935)
chr8 (449-566)||(39921842-39921959)
chr8 (446-544)||(30206515-30206613)
chr8 (452-541)||(23959905-23959994)
chr8 (449-566)||(32063187-32063303)
chr8 (449-566)||(3990770-3990893)
chr8 (449-541)||(23086374-23086466)
chr8 (476-560)||(44434583-44434667)
chr8 (476-566)||(603891-603982)
chr8 (444-541)||(9389495-9389592)
chr8 (449-541)||(14683404-14683496)
chr8 (623-719)||(31247989-31248085)
chr8 (454-538)||(35618017-35618101)
chr8 (491-566)||(3458793-3458868)
chr8 (449-541)||(38111705-38111797)
chr8 (625-709)||(44014962-44015046)
chr8 (449-541)||(27852984-27853076)
chr8 (451-541)||(34588435-34588519)
chr8 (480-566)||(44015105-44015192)
chr8 (452-541)||(34948237-34948326)
chr8 (473-541)||(14841021-14841089)
chr8 (502-539)||(13461335-13461372)
chr8 (520-566)||(44429844-44429891)
chr8 (509-566)||(31247874-31247932)
[»] chr3 (31 HSPs)
chr3 (622-789)||(53047086-53047253)
chr3 (622-762)||(17757776-17757916)
chr3 (622-762)||(19059096-19059236)
chr3 (625-789)||(2702212-2702375)
chr3 (449-562)||(47501157-47501271)
chr3 (449-566)||(24365922-24366039)
chr3 (449-566)||(37760852-37760969)
chr3 (449-566)||(23777218-23777335)
chr3 (464-566)||(53046928-53047030)
chr3 (449-566)||(836818-836934)
chr3 (449-562)||(36642740-36642853)
chr3 (449-544)||(860675-860770)
chr3 (475-566)||(46452551-46452642)
chr3 (447-541)||(20876489-20876583)
chr3 (449-541)||(38886836-38886928)
chr3 (446-566)||(2702434-2702551)
chr3 (449-541)||(51654730-51654822)
chr3 (449-541)||(10267370-10267462)
chr3 (449-563)||(11454754-11454869)
chr3 (449-562)||(45514226-45514338)
chr3 (449-529)||(11523319-11523399)
chr3 (474-565)||(25916718-25916810)
chr3 (495-555)||(35560636-35560696)
chr3 (446-512)||(2730927-2730993)
chr3 (490-566)||(17757972-17758051)
chr3 (490-566)||(19059292-19059371)
chr3 (489-566)||(43017641-43017717)
chr3 (493-566)||(11454126-11454201)
chr3 (528-566)||(35960256-35960294)
chr3 (686-762)||(21799958-21800034)
chr3 (475-525)||(25938511-25938559)
[»] scaffold1155 (2 HSPs)
scaffold1155 (623-762)||(656-795)
scaffold1155 (474-564)||(507-597)
[»] scaffold0345 (2 HSPs)
scaffold0345 (623-762)||(9422-9561)
scaffold0345 (474-564)||(9620-9710)
[»] scaffold0105 (2 HSPs)
scaffold0105 (623-762)||(29419-29558)
scaffold0105 (474-564)||(29270-29360)
[»] chr2 (27 HSPs)
chr2 (622-745)||(20639980-20640103)
chr2 (449-566)||(12896042-12896159)
chr2 (449-564)||(44543362-44543477)
chr2 (449-541)||(833282-833374)
chr2 (447-541)||(11658235-11658329)
chr2 (449-541)||(2131974-2132066)
chr2 (449-565)||(12898607-12898723)
chr2 (449-541)||(37130761-37130853)
chr2 (446-541)||(8430563-8430657)
chr2 (449-564)||(29550703-29550818)
chr2 (452-566)||(6348444-6348558)
chr2 (449-541)||(10128784-10128876)
chr2 (449-541)||(14335829-14335921)
chr2 (449-541)||(41327152-41327244)
chr2 (449-541)||(11736844-11736936)
chr2 (449-541)||(28611524-28611616)
chr2 (449-532)||(20639781-20639864)
chr2 (449-544)||(20709588-20709683)
chr2 (449-541)||(17370664-17370756)
chr2 (449-564)||(27351509-27351625)
chr2 (449-562)||(19640494-19640606)
chr2 (449-562)||(19839087-19839199)
chr2 (477-566)||(44257020-44257109)
chr2 (455-566)||(627954-628063)
chr2 (476-566)||(11131708-11131800)
chr2 (476-541)||(30556866-30556931)
chr2 (447-541)||(41995018-41995113)
[»] scaffold0018 (1 HSPs)
scaffold0018 (449-566)||(163386-163504)
[»] scaffold0504 (1 HSPs)
scaffold0504 (449-566)||(1334-1452)
[»] scaffold0294 (1 HSPs)
scaffold0294 (452-541)||(12134-12223)
[»] scaffold0240 (1 HSPs)
scaffold0240 (446-566)||(13629-13750)
[»] scaffold0097 (1 HSPs)
scaffold0097 (449-544)||(13427-13522)
[»] scaffold0090 (1 HSPs)
scaffold0090 (476-566)||(11999-12090)
[»] scaffold0320 (1 HSPs)
scaffold0320 (521-566)||(14264-14309)
[»] scaffold0167 (1 HSPs)
scaffold0167 (475-524)||(16594-16643)


Alignment Details
Target: chr6 (Bit Score: 213; Significance: 1e-116; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 213; E-Value: 1e-116
Query Start/End: Original strand, 1 - 251
Target Start/End: Original strand, 17905031 - 17905278
Alignment:
Q  1 tacaatcatactcttgttaaaaattttaacattagtaaaagagtcgttttcgtatatgaataatctcaatcgtacacgctttatatgtcgtctttcatgg 100  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  17905031 tacaatcatactcttgttaaaatttttaacattagtaaaagagtcggtttcgtatatgaataatctcaatcgtacacgctttatatgtc---tttcatgg 17905127  T
Q  101 ttataatattgcttaggatgagtttctttgggaaaaaggctaagaaaataattggagttaaaaacatgataaagacccctaaacagtaaattactacgaa 200  Q
    ||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17905128 ttataatatggtttaggatgagtttctttgggaaaaaggctaagaaaataattggagttaaaaacatgataaagacccctaaacagtaaattactacgaa 17905227  T
Q  201 cctttaataactttgccaaaacaacatgtgtagtagtagtaccacaaattg 251  Q
    ||||||||||||||||||||||||||||||||||||||||||  |||||||    
T  17905228 cctttaataactttgccaaaacaacatgtgtagtagtagtacaccaaattg 17905278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 332 - 566
Target Start/End: Original strand, 17905361 - 17905595
Alignment:
Q  332 atgatatccgaattctatagtaccccactccaaacgaaatgtatttctaatcataaagagcaacctgaaaaatagttattaattgataatttatggttct 431  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17905361 atgatatccgaattctatagtaccccactccaaacgaaatgtatttctaatcataaagagcaacctgaaaaatagttattaattgataatttatggttct 17905460  T
Q  432 cgattttgaacgattattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaac 531  Q
    | | ||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17905461 caactttgaacgattattagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaac 17905560  T
Q  532 ggtgaaaaaataacacgtgataatacatagtagac 566  Q
     ||||||||||||||||||||||||||||||||||    
T  17905561 agtgaaaaaataacacgtgataatacatagtagac 17905595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 626 - 789
Target Start/End: Original strand, 17905655 - 17905818
Alignment:
Q  626 aatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattag 725  Q
    ||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| ||||||||||  ||||||||||||||    
T  17905655 aatcctatcaataattcggtaaaagaactatgaaatttttagtccattggcatgtagtttcatcacacattgcaaaatacttccttatatacgacattag 17905754  T
Q  726 acgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||||| ||||||||||||||||||||  |||| ||||||| |||| |||||||    
T  17905755 acgttacattcgtatcctcaccatcttcatcagtgatcaatatctgtagtcattcttttgatgt 17905818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 1394274 - 1394107
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||| |||||||| ||||||||||  |||||| ||||    
T  1394274 cggtaatcctatcaataattcggtaaaagagatatgaaatttttagtatattggcatgtagtttcataacacattgtgaaatacttcttcatatatgaca 1394175  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  1394174 ttagacgttacattggtatcttcaccatcttcatcagtgatcaatatatttagtccttctctagatgt 1394107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 9829408 - 9829291
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  9829408 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgatatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacg 9829309  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  9829308 tgataatccatagtagac 9829291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 29202882 - 29202765
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  29202882 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacggataataaaatgtaatatataattggtaacggtgaaaaaataacacg 29202783  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  29202782 tgataatccatagtagac 29202765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 452 - 565
Target Start/End: Complemental strand, 1394445 - 1394331
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacacgtg 550  Q
    ||||||||||| |||||| ||  ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  1394445 atttttgacccgtgctcctctcaggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataacacgtg 1394346  T
Q  551 ataatacatagtaga 565  Q
    ||||| |||||||||    
T  1394345 ataatccatagtaga 1394331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 25068680 - 25068563
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| || ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||| |||||||||||||| |    
T  25068680 tagatttttgatccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacagtgaaaaaataacatg 25068581  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  25068580 tgataatccatagtagac 25068563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 34294694 - 34294597
Alignment:
Q  444 attattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||||||||||| ||||||||| |||||||||||||||| |||||| || |||||||||||||||||||||||||| ||||||||||||||    
T  34294694 attattagatttttgacccgtgctccgctcgggtttattgtaaaggaattgacgtacgaataataaaatgcaatatataattgataacggtgaaaaaa 34294597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 17203660 - 17203568
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| |||| |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  17203660 tagattttttacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 17203568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 4099555 - 4099647
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||  |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  4099555 tagattttaaacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattagtaacggtgaaaaaa 4099647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 449 - 565
Target Start/End: Original strand, 4810681 - 4810798
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    |||||||||||||  ||||   || ||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||  ||| ||||||||||||    
T  4810681 tagatttttgacctgtgctttactcgggtttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaatagtgaaaaaaataacac 4810780  T
Q  548 gtgataatacatagtaga 565  Q
    |||||||| |||||||||    
T  4810781 gtgataatccatagtaga 4810798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 622 - 698
Target Start/End: Complemental strand, 29202709 - 29202633
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgc 698  Q
    |||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||| ||||||||||||||||    
T  29202709 cggtaatcctatcaataatttggtaaaagaagtatgaattttttagtacattggcatgtagtttcatcacacattgc 29202633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 477 - 541
Target Start/End: Original strand, 26831809 - 26831873
Alignment:
Q  477 tttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||   ||| ||||| |||||||||||| ||||||||||||| ||||||||||||||    
T  26831809 tttattgtaaaaaaattaacatacgaataataaaatacaatatataattgataacggtgaaaaaa 26831873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 449 - 495
Target Start/End: Original strand, 6036588 - 6036634
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattga 495  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||||    
T  6036588 tagatttttgacccgtgctccgctcgagtttattgtaaagggattga 6036634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 449 - 525
Target Start/End: Complemental strand, 23623039 - 23622963
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataatt 525  Q
    |||||||||||||  ||||||||| | ||||||| ||||  ||||||||||  |||||||||||| |||| ||||||    
T  23623039 tagatttttgacctttgctccgctcgagtttattataaaatgattgacataccaataataaaatgtaatacataatt 23622963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 500 - 539
Target Start/End: Complemental strand, 809735 - 809696
Alignment:
Q  500 tgaataataaaatgcaatatataattggtaacggtgaaaa 539  Q
    ||||||||||||||||||||| ||||| ||||||||||||    
T  809735 tgaataataaaatgcaatatacaattgctaacggtgaaaa 809696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 490 - 541
Target Start/End: Original strand, 32207949 - 32208000
Alignment:
Q  490 gattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||  ||||||||||||||||||||||||| ||| ||||| ||||    
T  32207949 gattgacatagaaataataaaatgcaatatataattgataatggtgagaaaa 32208000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 124; Significance: 2e-63; HSPs: 4)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 104892 - 104725
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| |||||||||||  ||||||||||    
T  104892 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacattgagaaatacttccttatatacgaca 104793  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  104792 ttagacgttacattggtatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgt 104725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 127541 - 127374
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||    
T  127541 cggtaatcctatcaataattcggtaaaagaaatataaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacgaca 127442  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||| ||| ||||||||||||||||| ||||||||  |||| | |||||||||||| |||||    
T  127441 ttagacgttatattggtatcttcaccatcttcgtcagtgatcaatatctttagtccttctctggatgt 127374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #3
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 105066 - 104948
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    |||||||||||||| |||| |||| ||||||||| |||||||||||| ||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  105066 tagatttttgacccgtgcttcgctcgggtttattataaagggattgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaataacac 104967  T
Q  548 gtgataatacatagtagac 566  Q
    || ||||| ||||||||||    
T  104966 gttataatccatagtagac 104948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 555
Target Start/End: Complemental strand, 127716 - 127608
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg--aaaaaataaca 546  Q
    |||||||||||||| | || || | |||||| || ||||||| |||| ||| ||||||||||||||| ||||||||||||||| |||  |||||||||||    
T  127716 tagatttttgacccgtccttcgttcgggtttgttataaaggggttgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaaataaca 127617  T
Q  547 cgtgataat 555  Q
    |||||||||    
T  127616 cgtgataat 127608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 123; Significance: 9e-63; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 123; E-Value: 9e-63
Query Start/End: Original strand, 622 - 792
Target Start/End: Complemental strand, 24050852 - 24050682
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||||||| |||||||||||    
T  24050852 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacattacaaaatacttcctcatatacgaca 24050753  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgtcca 792  Q
    ||||| |||||||| ||||||||||||||||||||||||||  |||| | |||||||||||| ||||||||    
T  24050752 ttagatgttacattggtatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgtcca 24050682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 625 - 781
Target Start/End: Complemental strand, 29968476 - 29968320
Alignment:
Q  625 taatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacatta 724  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||||| |||||    
T  29968476 taatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtattttcatcacacattgtgaaatacttcctcatatacggcatta 29968377  T
Q  725 gacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttct 781  Q
    ||||||||||| ||||||||||||||||||||||||||  |||||| ||||||||||    
T  29968376 gacgttacattagtatcttcaccatcttcatcagtgatcaatatttttagtccttct 29968320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 105; E-Value: 5e-52
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 41851041 - 41851208
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||  |||||||||||||||||||||| |||||||||||||||||||||||||| | |||||||||||||||||||||||||||| ||||| ||||    
T  41851041 cggtaatattatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgcagtttcatcacacattgcgaaatacttcccaatatatgaca 41851140  T
Q  722 ttagacgttacattcg-tatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| | |||||||||||||||||||||||| | |||| | |||||||||||| |||||    
T  41851141 ttagacgttacattggttatcttcaccatcttcatcagtga-tcatatctttagtccttctctagatgt 41851208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 2479206 - 2479373
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| |||||||| |||||||||||||||| | |||||||   |    
T  2479206 cggtaatcctatcaataatttggtaaaagaaatatgaaaattttagtacattggcatgtagtttcatcatacattgcgaaatactttctcatatacagaa 2479305  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| ||||||||||||||||||||||| ||  |||| | ||||| |||||| |||||    
T  2479306 ttagacgttacattagtatcttcaccatcttcatcagtaatcaatatctttagtcattctctggatgt 2479373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 622 - 745
Target Start/End: Original strand, 18000452 - 18000575
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||| ||||    
T  18000452 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacaaattgcaaaatacttcctcatataagaca 18000551  T
Q  722 ttagacgttacattcgtatcttca 745  Q
    |||||||||||||| |||||||||    
T  18000552 ttagacgttacattggtatcttca 18000575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 32010480 - 32010599
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| |||||||||||||    
T  32010480 attagatttttgacccgtgctccgcttgggtttattgtaaagggattgacatacgaataataaaatgcaatatattataggtaacgatgaaaaaataaca 32010579  T
Q  547 cgtgataatacatagtagac 566  Q
    ||||||||| ||||||||||    
T  32010580 cgtgataattcatagtagac 32010599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 624 - 781
Target Start/End: Original strand, 47427951 - 47428108
Alignment:
Q  624 gtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacatt 723  Q
    ||||| ||||||||||||||||||||||| ||| || ||||||||||||||||||||| |||||||||||||||  |||||||| | |||||||||| ||    
T  47427951 gtaatactatcaataattcggtaaaagaaatataaattttttagtacattggcatgtagtttcatcacacattgtaaaatactttctcatatacgacgtt 47428050  T
Q  724 agacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttct 781  Q
    ||| |||||||| ||||||||||||||||||||||||||  |||| | ||||||||||    
T  47428051 agatgttacattagtatcttcaccatcttcatcagtgatcaatatctatagtccttct 47428108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 12795490 - 12795610
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataac 545  Q
    ||||||||||||||||| |||| |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  12795490 tattagatttttgacccgtgcttcgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaataac 12795589  T
Q  546 acgtgataatacatagtagac 566  Q
    |||||||||| ||||||||||    
T  12795590 acgtgataattcatagtagac 12795610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 2479032 - 2479150
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    |||||||||||||| ||||| ||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||    
T  2479032 tagatttttgacccgtgctctgctcgggtttattgtaaagggattgacatatgaatgataaaatgcaatatataattggtaacggtgaaaaaaataacac 2479131  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  2479132 gtgataattcatagtagac 2479150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 29968654 - 29968535
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||| ||| | ||||||||| |||||||||||| ||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  29968654 attagattttagactcgtgctccgctcgggtttattgtatagggattgacatacgaataatgaaatgcaatatataattggtaacggtgaaaaaataaca 29968555  T
Q  547 cgtgataatacatagtagac 566  Q
    | ||||||||||||||||||    
T  29968554 cttgataatacatagtagac 29968535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 48076850 - 48076733
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||| |    
T  48076850 tagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatatatgataggtaacggagaaaaaataacatg 48076751  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  48076750 tgataatccatagtagac 48076733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 8478512 - 8478631
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||||||| | ||||||||||  ||||||||||||||||||||||||  ||||||||||||||||||||||| |||||||||||||||||||||    
T  8478512 attagatttttgactcgtgctccgcttatgtttattgtaaagggattgacatacaaataataaaatgcaatatataataggtaacggtgaaaaaataaca 8478611  T
Q  547 cgtgataatacatagtagac 566  Q
     ||||||||  |||||||||    
T  8478612 tgtgataatctatagtagac 8478631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 47427776 - 47427894
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    ||||||||| | || ||||||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||     
T  47427776 tagattttttatccgtgctccgctcggatttattgtaaaaggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaaataacat 47427875  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  47427876 gtgataatccatagtagac 47427894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 37325384 - 37325267
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||||| || ||||||||||||||  |||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||    
T  37325384 tagatttttgacccgtgctccactcgggtttattgtaaatagattgacataagaataataaaatgcaatatataataggtaaccgtgaaaaaataacacg 37325285  T
Q  549 tgataatacatagtagac 566  Q
     |||||| ||||||||||    
T  37325284 cgataatccatagtagac 37325267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 458 - 566
Target Start/End: Complemental strand, 24051016 - 24050908
Alignment:
Q  458 gacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatac 557  Q
    ||||| ||||||||| ||||||||||||||  |||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||      
T  24051016 gacccgtgctccgctcgggtttattgtaaaaagattgacatacgaataataaaatgcaatatataattagtaacggtgaaaaaataacacgtgataattt 24050917  T
Q  558 atagtagac 566  Q
    |||||||||    
T  24050916 atagtagac 24050908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 52688589 - 52688681
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  52688589 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 52688681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 449 - 555
Target Start/End: Original strand, 23952124 - 23952229
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||| | |||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  23952124 tagatttatcacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaa-ggtgaaaaaataacacg 23952222  T
Q  549 tgataat 555  Q
    |||||||    
T  23952223 tgataat 23952229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 47769443 - 47769326
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||||   ||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||| ||||| |||||||||||||||||    
T  47769443 tagatttttgacttgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaataacacg 47769344  T
Q  549 tgataatacatagtagac 566  Q
    | ||||| |||| |||||    
T  47769343 ttataatccataatagac 47769326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 622 - 781
Target Start/End: Complemental strand, 10466938 - 10466778
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaattttt-agtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgac 720  Q
    ||||||||||||||||||||||||||||||| ||| |  ||||| | ||||||| |||||  |||||||||||||||| |||||||||| ||||||||||    
T  10466938 cggtaatcctatcaataattcggtaaaagaaatataattttttttattacattgacatgttgtttcatcacacattgctaaatacttcctcatatacgac 10466839  T
Q  721 attagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttct 781  Q
     |||||||||||||| |||| |||| |||||||| |||| ||  |||| | ||||||||||    
T  10466838 gttagacgttacattagtattttcatcatcttcaccagtcatcaatatctttagtccttct 10466778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 28379295 - 28379387
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| |||||| || || ||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  28379295 tagatttttgacccgtgctccactcggatttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaatggtgaaaaaa 28379387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 36639841 - 36639720
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaa----ataa 544  Q
    |||||||||||||| | || |||| |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||||||    ||||    
T  36639841 tagatttttgacccgtacttcgctcgggtttattgtaaaggaattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataaataa 36639742  T
Q  545 cacgtgataatacatagtagac 566  Q
    |||||||||||  |||||||||    
T  36639741 cacgtgataatctatagtagac 36639720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 454 - 541
Target Start/End: Complemental strand, 2177901 - 2177814
Alignment:
Q  454 ttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| || |||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  2177901 ttttgacccgtgttccgctcgggtttattgtaaagggattggcatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 2177814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 8119370 - 8119275
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||| |||| ||||| ||| |||||||||| ||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  8119370 tagattttttacccgtgctctgctcgggtttattgcaaagggattgacatacgaataataaaatgcaatatataattgttaacggtgaaaaaataa 8119275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 14989430 - 14989313
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||| || | |||||||| |||||| |||||||||| ||||| |||||| ||||||||||| | |||||||||||||| ||||||    
T  14989430 tagatttttgacccgtgcttcgttcgggtttatcgtaaagagattgacatacgaatactaaaattcaatatataatagttaacggtgaaaaaaaaacacg 14989331  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  14989330 tgataatccatagtagac 14989313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 44501017 - 44500928
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||| ||||||    
T  44501017 atttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatttataacggtaaaaaaa 44500928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 54652882 - 54652974
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| | || ||||||| | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  54652882 tagattttttatccgtgctccgttcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 54652974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 18000253 - 18000336
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacg 532  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  18000253 tagattttttacccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatgcaatatataattggtaacg 18000336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 453 - 540
Target Start/End: Complemental strand, 22293753 - 22293666
Alignment:
Q  453 tttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaa 540  Q
    ||||| |||| ||||||  |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22293753 ttttttacccgtgctccaattggatttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaa 22293666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 28813991 - 28813899
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||| | || |||||||| |||| ||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  28813991 tagatttttgacccgtgctccgatcggatttattgtgaaggaattgacatacgaatattaaaatgcaatatataattggtaacggtgaaaaaa 28813899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 541
Target Start/End: Complemental strand, 4942453 - 4942377
Alignment:
Q  465 gctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  |||| |||||||||    
T  4942453 gctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattaataactgtgaaaaaa 4942377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 465 - 541
Target Start/End: Original strand, 53143031 - 53143107
Alignment:
Q  465 gctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||| ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  53143031 gctctgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaa 53143107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 529
Target Start/End: Original strand, 8396884 - 8396965
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaag-ggattgacatatgaataataaaatgcaatatataattggta 529  Q
    |||||||||||||| ||||||||| |||||||||| |||  ||||||||||| |||||||||||||||||||||||||||||    
T  8396884 tagatttttgacccgtgctccgctcgggtttattgcaaaaaggattgacatacgaataataaaatgcaatatataattggta 8396965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 481 - 541
Target Start/End: Original strand, 52688741 - 52688801
Alignment:
Q  481 ttgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  52688741 ttgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 52688801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 453 - 541
Target Start/End: Complemental strand, 7822382 - 7822290
Alignment:
Q  453 tttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataat----aaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||| ||||||||| ||||||||||||||||||||||| ||  ||||||    ||||||||||||||||||||||||| ||||||||    
T  7822382 tttttgacccgtgctccgctcgggtttattgtaaagggattgacgtacaaataataaaaaaaatgcaatatataattggtaacgatgaaaaaa 7822290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 477 - 563
Target Start/End: Original strand, 41850895 - 41850982
Alignment:
Q  477 tttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtga-aaaaataacacgtgataatacatagta 563  Q
    ||||| ||||||| ||||||||| |||||||||||||||||||||||||| ||||||||| |||||||||| || ||||| |||||||    
T  41850895 tttatcgtaaaggaattgacatacgaataataaaatgcaatatataattgataacggtgagaaaaataacatgttataatccatagta 41850982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 464 - 566
Target Start/End: Original strand, 21580847 - 21580949
Alignment:
Q  464 tgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagta 563  Q
    ||||||||| || |||||||||||||||||||| ||  ||||||||||||  |||||||||   ||| ||||||||||||||||||||||||  ||||||    
T  21580847 tgctccgctcggatttattgtaaagggattgacttacaaataataaaatgtcatatataataattaatggtgaaaaaataacacgtgataatttatagta 21580946  T
Q  564 gac 566  Q
    |||    
T  21580947 gac 21580949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 505 - 561
Target Start/End: Complemental strand, 10467049 - 10466991
Alignment:
Q  505 aataaaatgcaatatataattggtaacggtgaa--aaaataacacgtgataatacatag 561  Q
    |||||||||||||||||||||||||||||||||  |||||||||||||||||| |||||    
T  10467049 aataaaatgcaatatataattggtaacggtgaaaaaaaataacacgtgataatccatag 10466991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 449 - 521
Target Start/End: Complemental strand, 15465066 - 15464994
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatat 521  Q
    |||||||||||||| ||||||||| ||||||||||||||||| |||||| |  |||||| ||||||| |||||    
T  15465066 tagatttttgacccgtgctccgctcgggtttattgtaaagggcttgacagacaaataatcaaatgcattatat 15464994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 7812900 - 7812812
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| |||||| ||||||||  ||  ||| || ||||| ||||||||||||||||||| ||||||||||||||    
T  7812900 tagatttttgacccgtgctccgctcgggttttttgtaaagc-at--acaaat-aataaaaaaatgcaatatataattgataacggtgaaaaaa 7812812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 501 - 555
Target Start/End: Original strand, 32962629 - 32962683
Alignment:
Q  501 gaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataat 555  Q
    |||||||| ||||||||||||||| |  ||||||||||||||||||||| |||||    
T  32962629 gaataatagaatgcaatatataatagacaacggtgaaaaaataacacgtcataat 32962683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 120; Significance: 6e-61; HSPs: 26)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 14164380 - 14164547
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||||    
T  14164380 cggtaatcatatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacattgcaaaatacttcctcatatacgaca 14164479  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| |||||||||||||||||||||| |||  |||| | |||||||||||| |||||    
T  14164480 ttagacgttacattggtatcttcaccatcttcatcagcgatcaatatctttagtccttctctggatgt 14164547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 627 - 783
Target Start/End: Complemental strand, 19123411 - 19123255
Alignment:
Q  627 atcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattaga 726  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| ||||||||||||||||    
T  19123411 atcctatcaataattcggtaaaagaaatatgaaatttttagtacattgacatgtagtttcatcacacattgtgaaatacttcctcatatacgacattaga 19123312  T
Q  727 cgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctct 783  Q
    ||||||||| ||||||||||||||||||||| ||||  |||| | ||||||||||||    
T  19123311 cgttacattggtatcttcaccatcttcatcaatgatcaatatctttagtccttctct 19123255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 638 - 789
Target Start/End: Original strand, 31486178 - 31486329
Alignment:
Q  638 aattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattagacgttacattcg 737  Q
    ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||| |||||||||| |||||| ||||||| |    
T  31486178 aattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacattgcaaaatacttcctcatatacgacgttagacattacattgg 31486277  T
Q  738 tatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  31486278 tatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgt 31486329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 446 - 564
Target Start/End: Complemental strand, 10410015 - 10409897
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataac 545  Q
    ||||||||||||||||| |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||    
T  10410015 tattagatttttgacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacggtgaaaaaataac 10409916  T
Q  546 acgtgataatacatagtag 564  Q
    |||||||||| ||||||||    
T  10409915 acgtgataatccatagtag 10409897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 14164203 - 14164324
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg--aaaaaataa 544  Q
    ||||||||||||| || ||||||| | |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  |||||||||    
T  14164203 attagatttttgatccgtgctccgttcgggtttattgtaaaaggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaaaataa 14164302  T
Q  545 cacgtgataatacatagtagac 566  Q
    ||||||||||| ||||||||||    
T  14164303 cacgtgataatccatagtagac 14164324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 41092268 - 41092385
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||  ||||||||| ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||||||||| |||||||||||    
T  41092268 tagatttttgaccagtgctccgctcgggtttattgtaaagtgattgacatacgaataataaaatgcaatatataataggtaacggtgagaaaataacacg 41092367  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  41092368 tgataattcatagtagac 41092385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 654 - 762
Target Start/End: Complemental strand, 23141264 - 23141156
Alignment:
Q  654 tatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattagacgttacattcgtatcttcaccatcttc 753  Q
    ||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||||||    
T  23141264 tatgaaatttttaatacgttggcatgtagtttcatcacacattgcgaaatacttcctcatatacgacgttagacgttacattggtatcttcaccatcttc 23141165  T
Q  754 atcagtgat 762  Q
    |||||||||    
T  23141164 atcagtgat 23141156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 7672744 - 7672861
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| || ||||||||| |||||||||||| ||||||||||||| |||| ||||||||||||||||||| ||||| |||||||||||||||||    
T  7672744 tagatttttgatccgtgctccgctcgggtttattgtatagggattgacatacgaatgataaaatgcaatatataataggtaatggtgaaaaaataacacg 7672843  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  7672844 tgataatccatagtagac 7672861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 41511774 - 41511677
Alignment:
Q  444 attattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||| |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  41511774 attactagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 41511677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 43394566 - 43394683
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| || || | |||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  43394566 tagatttttgatccgtgtttcgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacg 43394665  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| || |||||||    
T  43394666 tgataatccaaagtagac 43394683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 451 - 566
Target Start/End: Complemental strand, 16529439 - 16529324
Alignment:
Q  451 gatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtg 550  Q
    ||||||||| || ||||||||| | |||||||||||||||||||||||| ||||||| ||||||||||||| || |||||||||||||||||||||||||    
T  16529439 gatttttgatccgtgctccgctcgagtttattgtaaagggattgacatacgaataatgaaatgcaatatatgataggtaacggtgaaaaaataacacgtg 16529340  T
Q  551 ataatacatagtagac 566  Q
    ||||| ||||||||||    
T  16529339 ataatccatagtagac 16529324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 16538280 - 16538163
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||| | ||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||| || ||||| ||||||||||||| |||    
T  16538280 tagatttttgacgcgtgctccgctcgggtttattgtagagggattgacatacgaataataaaatgcaatatatgataggtaatggtgaaaaaataatacg 16538181  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  16538180 tgataattcatagtagac 16538163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 636 - 781
Target Start/End: Original strand, 31487192 - 31487336
Alignment:
Q  636 ataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattagacgttacatt 735  Q
    |||||| ||||||| || |||||||||||||||||||||||||||| ||||||| ||||||| ||||||||||| ||||| |||| ||||| ||||||||    
T  31487192 ataatttggtaaaataaatatgaaatttttagtacattggcatgtagtttcatcgcacattgtgaaatacttcctcatatgcgacgttagatgttacatt 31487291  T
Q  736 cgtatcttcaccatcttcatcagtgattgatatttgtagtccttct 781  Q
     ||| ||||||||||||||||||||||  |||| | ||||||||||    
T  31487292 ggta-cttcaccatcttcatcagtgatcaatatctttagtccttct 31487336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 7129290 - 7129171
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg--aaaaaataaca 546  Q
    |||||||||||| |||||| ||||  ||||||||||||||||||||||||| ||||||||||||||||||||||||| |||| ||||  |||||||||||    
T  7129290 tagatttttgactcatgcttcgctcaggtttattgtaaagggattgacatacgaataataaaatgcaatatataattagtaatggtgaaaaaaaataaca 7129191  T
Q  547 cgtgataatacatagtagac 566  Q
    ||||||||| ||||||||||    
T  7129190 cgtgataatccatagtagac 7129171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 19123587 - 19123472
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||||  || || |||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||  ||||||    
T  19123587 tagatttttgacccgtgctctactcggatttattgtaaagggattgacatacaaataataaaatgtaatatataattggtaacggtgaaaaa--aacacg 19123490  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  19123489 tgataatccatagtagac 19123472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 452 - 566
Target Start/End: Original strand, 26522712 - 26522826
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtga 551  Q
    ||||||||| | || |||||| || |||||||||||| |||||||||| |||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  26522712 atttttgactcgtgttccgctcggatttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaacagtaaaaaaataacacgtga 26522811  T
Q  552 taatacatagtagac 566  Q
    ||||| |||||||||    
T  26522812 taatatatagtagac 26522826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 447 - 544
Target Start/End: Complemental strand, 19322857 - 19322760
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    |||||||||||||||| |||||| |||| |||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||||    
T  19322857 attagatttttgacccgtgctccacttgagtttattgtaaaggaattgacatacggataataaaatgcaatatataattgataacggtgaaaaaataa 19322760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 459 - 566
Target Start/End: Original strand, 38004044 - 38004150
Alignment:
Q  459 acccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataataca 558  Q
    |||| ||||||||| ||||||||||||||| |||| ||||||||| |||||||||||||||||||| |||||| |||||||||||||||||| |||| ||    
T  38004044 acccgtgctccgctcgggtttattgtaaagagatttacatatgaaaaataaaatgcaatatataataggtaac-gtgaaaaaataacacgtggtaattca 38004142  T
Q  559 tagtagac 566  Q
    ||||||||    
T  38004143 tagtagac 38004150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 447 - 541
Target Start/End: Complemental strand, 38110674 - 38110580
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||  ||||||| | ||||||||||||||||||||||||||  ||||||||||||||||||||| ||||||||||||||||||    
T  38110674 attagatttttgacctgtgctccgttcgggtttattgtaaagggattgacatacaaataataaaatgcaatatatatttggtaacggtgaaaaaa 38110580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 23141458 - 23141338
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatata--attggtaacggtg-aaaaaataac 545  Q
    |||||||| ||||| ||||||||   ||||||||||||||||||||||||| ||||||||||||||||||||||  |||| ||| |||| ||||||||||    
T  23141458 tagattttagacccgtgctccgcacaggtttattgtaaagggattgacatacgaataataaaatgcaatatataatattgataatggtgaaaaaaataac 23141359  T
Q  546 acgtgataatacatagtagac 566  Q
    |||||||||| ||||||||||    
T  23141358 acgtgataatccatagtagac 23141338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 454 - 541
Target Start/End: Complemental strand, 20563386 - 20563299
Alignment:
Q  454 ttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| ||||||||| | |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  20563386 ttttgacccgtgctccgctcgagtttattgtaaagggattgacatgcgaataataaaatgcaatatataattggtaacagtgaaaaaa 20563299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 16306191 - 16306099
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||   |||||| | |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||| ||||    
T  16306191 tagatttttgacctccgctccgttcgggtttattgtaaaaggattgacatacgaataataaaatgtaatatataattggtaacggtgagaaaa 16306099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 56; E-Value: 9e-23
Query Start/End: Original strand, 449 - 540
Target Start/End: Original strand, 12441618 - 12441709
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaa 540  Q
    |||||||||||||| |||||||||  |||||||||||||||||||| |||| ||||||||||||  | |||||||||| |||||||||||||    
T  12441618 tagatttttgacccgtgctccgctcaggtttattgtaaagggattggcatacgaataataaaatatagtatataattgataacggtgaaaaa 12441709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 460 - 541
Target Start/End: Original strand, 9487342 - 9487423
Alignment:
Q  460 cccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||| |||||| |  ||||||||||||| |||||||||  ||||||||||||||||||||||||| ||||||||||||||    
T  9487342 cccatgttccgctcgaatttattgtaaaggaattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaa 9487423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 516 - 565
Target Start/End: Complemental strand, 35160123 - 35160074
Alignment:
Q  516 atatataattggtaacggtgaaaaaataacacgtgataatacatagtaga 565  Q
    ||||||||| ||||||||||||||||||||||||||||||  ||||||||    
T  35160123 atatataataggtaacggtgaaaaaataacacgtgataatctatagtaga 35160074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 622 - 660
Target Start/End: Complemental strand, 7129118 - 7129080
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaa 660  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  7129118 cggtaatcctatcaataattcggtaaaagaaatatgaaa 7129080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 120; Significance: 6e-61; HSPs: 35)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 120; E-Value: 6e-61
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 38685661 - 38685495
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||||||||||| || |||||||||||||||||||||||||||| |||||||||||||||| ||||| |||| |||||||||||    
T  38685661 cggtaatcctatcaataattcggtaaaaaaa-tatgaaatttttagtacattggcatgtagtttcatcacacattgcaaaatatttcctcatatacgaca 38685563  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||||| |||||||||||| |||||    
T  38685562 ttagacgttacattggtatcttcaccatcttcatcagtgatcaatatttttagtccttctctggatgt 38685495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 103; E-Value: 8e-51
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 5429569 - 5429398
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattg----cgaaatacttccccatatac 717  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||| ||    |||||||||||| |||||||    
T  5429569 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacactgcgaacgaaatacttcctcatatac 5429470  T
Q  718 gacattagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    || |||| | |||||||| ||||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  5429469 gatattaaatgttacatttgtatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgt 5429398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 622 - 762
Target Start/End: Complemental strand, 21882716 - 21882576
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  21882716 cggtaatcctatcaataattcggtaaaataaatatgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacgacg 21882617  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    |||||||| ||||| || ||||||||||||||||| |||||    
T  21882616 ttagacgtcacattggtgtcttcaccatcttcatccgtgat 21882576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 634 - 789
Target Start/End: Original strand, 23480841 - 23480996
Alignment:
Q  634 caataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattagacgttaca 733  Q
    ||||||||||||||||||| ||||||| |||||||||||||||| ||| ||||||||||||||||||||||||||| ||||||||||  ||||||| |||    
T  23480841 caataattcggtaaaagaaatatgaaaattttagtacattggcacgtagtttcatcacacattgcgaaatacttcctcatatacgacgctagacgtcaca 23480940  T
Q  734 ttcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    || ||||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  23480941 ttggtatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgt 23480996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 27296812 - 27296693
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||||||||| ||||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  27296812 attagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataaca 27296713  T
Q  547 cgtgataatacatagtagac 566  Q
     |||||||| ||||||||||    
T  27296712 tgtgataattcatagtagac 27296693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 28949507 - 28949624
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  28949507 tagatttttgacccgtgctccgctcgggtttattgtaaaaggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataatacg 28949606  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  28949607 tgataatccatagtagac 28949624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 444 - 565
Target Start/End: Original strand, 1155670 - 1155791
Alignment:
Q  444 attattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaata 543  Q
    |||| |||||||||||| ||||||||||| | ||||||| |||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||    
T  1155670 attaatagatttttgactcatgctccgctcgagtttattataaagggattgacatacgaataataaaatgcaatatataataggtaatggtgaaaaaata 1155769  T
Q  544 acacgtgataatacatagtaga 565  Q
    |||||||||||| ||| |||||    
T  1155770 acacgtgataattcattgtaga 1155791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 449 - 563
Target Start/End: Original strand, 48411583 - 48411697
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||| |||| ||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||| ||||||||||||||    
T  48411583 tagatttttaacccgtgccccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataatagataacggcgaaaaaataacacg 48411682  T
Q  549 tgataatacatagta 563  Q
    ||||||| |||||||    
T  48411683 tgataatccatagta 48411697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 21618896 - 21618804
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21618896 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 21618804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 560
Target Start/End: Complemental strand, 24595705 - 24595594
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||| ||||||| | ||||||| | ||||||||||||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||    
T  24595705 tagaattttgactcgtgctccgatcgggtttattgtaaagagattgacatatgcataataaaatgcaatatataataggtaacggtgaaaaaataacacg 24595606  T
Q  549 tgataatacata 560  Q
    ||||||| ||||    
T  24595605 tgataatccata 24595594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 537
Target Start/End: Complemental strand, 12116161 - 12116073
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa 537  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||    
T  12116161 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaa 12116073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 16165190 - 16165282
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| | |||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  16165190 tagatttttgacccgtgctccgctcgagtttattgtaaagggattgacatacgaataatgaaatgcaatatataattggtaacggtgaaaaaa 16165282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 25931334 - 25931426
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| | |||||||| |||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  25931334 tagatttttgacccgtactccgcttaggtttattgtaaagtgattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 25931426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 444 - 544
Target Start/End: Original strand, 44451661 - 44451761
Alignment:
Q  444 attattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaata 543  Q
    |||| |||||||||||||| ||||||||| ||||||||| |||||||||||| ||| ||||||||||||||||||||||||||||||| |||||||||||    
T  44451661 attactagatttttgacccgtgctccgctagggtttattataaagggattgatatacgaataataaaatgcaatatataattggtaacagtgaaaaaata 44451760  T
Q  544 a 544  Q
    |    
T  44451761 a 44451761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 3226479 - 3226573
Alignment:
Q  447 attagatttttgacccatgctccgctt-gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||| |||||||||| |||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||    
T  3226479 attagatttttgacccgtgctccgcttcgggtttattgtaaagggattgacatacgaataat-aaatgcaatatataattggtaacggtgaaaaaa 3226573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 5429743 - 5429625
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacac 547  Q
    |||||||||||||| ||||||||| || ||||| ||||||||||||||||  ||||||||||||| |||||||||||| |||||||||| ||||||||||    
T  5429743 tagatttttgacccgtgctccgctcggatttatggtaaagggattgacatgcgaataataaaatgtaatatataattgataacggtgaaaaaaataacac 5429644  T
Q  548 gtgataatacatagtagac 566  Q
    ||||||||  |||||||||    
T  5429643 gtgataatctatagtagac 5429625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 447 - 541
Target Start/End: Complemental strand, 39282490 - 39282396
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||| |||||||||  | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  39282490 attagatttttgacccgtgctccgctcagatttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaa 39282396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 468 - 566
Target Start/End: Original strand, 44099244 - 44099341
Alignment:
Q  468 ccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    ||||| ||| |||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||||||||| ||||||||||    
T  44099244 ccgctcgggcttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtg-aaaaataacacgtgataatccatagtagac 44099341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 1648352 - 1648260
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||||||||    
T  1648352 tagatttttgacctgtgctccgctcgggtttattgtaaagggattggcatacgaataataaaatgcaatatataattggtaatggtgaaaaaa 1648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 4099892 - 4099984
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| |||  ||||||||| |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||    
T  4099892 tagattttttaccagtgctccgctcgggtttattgtaaagggattgacatacgaataataaaattcaatatataattggtaacggtgaaaaaa 4099984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 44264610 - 44264518
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| ||||||||||||||||  || ||||| |||||||||||||||||||||||||||||||||||||||||    
T  44264610 tagatttttgacccgtgctccgctagggtttattgtaaaggatttaacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 44264518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 458 - 566
Target Start/End: Complemental strand, 51114386 - 51114278
Alignment:
Q  458 gacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatac 557  Q
    ||||| ||||||||| || |||||||||||| |||||| ||| ||||||||||||||||||||| || |||||| ||||||||||||||||||||||| |    
T  51114386 gacccgtgctccgctcggatttattgtaaagagattgatatacgaataataaaatgcaatatatgataggtaacagtgaaaaaataacacgtgataatcc 51114287  T
Q  558 atagtagac 566  Q
    |||||||||    
T  51114286 atagtagac 51114278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 47791502 - 47791410
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| | ||||||| || ||||||||||||| |||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  47791502 tagatttttgacccgtactccgctcggatttattgtaaaggaattgacatatgaataataaaatgcaatatataattggtaacaatgaaaaaa 47791410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 476 - 566
Target Start/End: Complemental strand, 38685808 - 38685717
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacacgtgataatacatagtagac 566  Q
    ||||||| |||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||||    
T  38685808 gtttattttaaagggattaacataagaataataaaatgcaatatataattggtaacggtgaaaaaaataacacgtgataatctatagtagac 38685717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 446 - 544
Target Start/End: Complemental strand, 18913207 - 18913109
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    |||||||||||||| || |||||||||    ||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||||||||||    
T  18913207 tattagatttttgatccgtgctccgctcaaatttattgtaaagggattgatatacgaataataaaatgcaatatataattggtcacggtgaaaaaataa 18913109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 52407480 - 52407572
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| | ||||||||||||||||||| |||| |||||||||||||||||||||| ||| |||| |||||||||    
T  52407480 tagatttttgacccgtgctccgctcgagtttattgtaaagggattgccatacgaataataaaatgcaatatatatttgataacagtgaaaaaa 52407572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 42491593 - 42491711
Alignment:
Q  449 tagatttttgacccatgctccgct--tgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||||||| |||||||||  || ||||||| |||| | ||||||||| |||||||||||||||||||||||| ||||||  |||||||||||      
T  42491593 tagatttttgacccgtgctccgctcgtgtgtttattttaaaag-attgacatacgaataataaaatgcaatatataataggtaacaatgaaaaaataaat 42491691  T
Q  547 cgtgataatacatagtagac 566  Q
    ||||||||| ||||||||||    
T  42491692 cgtgataatccatagtagac 42491711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 566
Target Start/End: Complemental strand, 21882836 - 21882746
Alignment:
Q  477 tttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| ||||||||||    
T  21882836 tttattgttaagggattgacatacaaataataaaatgcaatatataattggtaagggtgaaaaaaagaacaggtgataatccatagtagac 21882746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 474 - 566
Target Start/End: Original strand, 23480684 - 23480777
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    ||||||||||| ||  |||||||||| |||||||||||| |||||||||||||||||||||| |||||| |||| ||||||||| |||||||||    
T  23480684 gggtttattgttaactgattgacatacgaataataaaatacaatatataattggtaacggtgaaaaaaagaacaggtgataatatatagtagac 23480777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 445 - 526
Target Start/End: Complemental strand, 52741114 - 52741033
Alignment:
Q  445 ttattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattg 526  Q
    ||||||||||||| |||| || || | | |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  52741114 ttattagattttttacccgtgttctgttcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattg 52741033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 565
Target Start/End: Complemental strand, 319095 - 318981
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||  |||||||||   |||||||||||||| ||||||||| ||||||||||||  |||||||||| ||||||  || ||||||||||||    
T  319095 tagatttttgaccg-tgctccgctcaagtttattgtaaaggaattgacatacgaataataaaatataatatataataggtaacaatg-aaaaataacacg 318998  T
Q  549 tgataatacatagtaga 565  Q
    ||||||| |||||||||    
T  318997 tgataattcatagtaga 318981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 6537107 - 6537199
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| || ||||| ||| || |||||||||||| | |||||||| |||||||||||||||||||||||||| ||||||| ||||||    
T  6537107 tagatttttgaaccgtgctctgctcggatttattgtaaagaggttgacatacgaataataaaatgcaatatataattgataacggtaaaaaaa 6537199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 481 - 541
Target Start/End: Complemental strand, 21618744 - 21618684
Alignment:
Q  481 ttgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||    
T  21618744 ttgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaa 21618684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 45416852 - 45416946
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||| ||||||||| |||| | ||  |||||||| |||| ||||||||||| ||||||||||||||||||  |||||| ||||||||||||||    
T  45416852 attagaattttgacccgtgctacactcaggtttattataaaaggattgacatacgaataataaaatgcaataagtaattgataacggtgaaaaaa 45416946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 476 - 521
Target Start/End: Complemental strand, 46533454 - 46533409
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatat 521  Q
    ||||||||| |||||||| ||||| ||||||||||||| |||||||    
T  46533454 gtttattgttaagggattaacatacgaataataaaatgtaatatat 46533409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 116; Significance: 1e-58; HSPs: 2)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 71173 - 71340
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||||| ||||    
T  71173 cggtaatcctatcaataattcagtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacacattgtgaaatacttcctcatatatgaca 71272  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| ||||||||||||||||||||||||||  |||| | ||||| |||||| |||||    
T  71273 ttagacgttacattggtatcttcaccatcttcatcagtgatcaatatctttagtctttctctggatgt 71340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 555
Target Start/End: Original strand, 70582 - 70689
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||| ||| ||||||||||||||| ||||||||||||||| ||| ||||||||||||    
T  70582 tagatttttgacccatgcttcgctcgggtttattgttaagggattgagatacgaataataaaatgcattatataattggtaacagtgaaaaaaataacac 70681  T
Q  548 gtgataat 555  Q
    || |||||    
T  70682 gttataat 70689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 114; Significance: 2e-57; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 624 - 789
Target Start/End: Original strand, 9141166 - 9141331
Alignment:
Q  624 gtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacatt 723  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||| | ||||||||||||||||||||||||||| |||||||||||||    
T  9141166 gtaatcctatcaataattcggtaaaagaaatatgaaaattttagtacattggcatgcattttcatcacacattgcgaaatacttcctcatatacgacatt 9141265  T
Q  724 agacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||| |||||||||||||| |||||| ||||  |||| | |||||||||||| |||||    
T  9141266 agacgttacattggtatcttcaccatcatcatcaatgatcaatatctttagtccttctctagatgt 9141331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 622 - 762
Target Start/End: Original strand, 22967912 - 22968052
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||||||||||| || ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  22967912 cggtaatcctatcaataattcggtaaaataaatatgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacgacg 22968011  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    |||||||| ||||| || ||||||||||||||||| |||||    
T  22968012 ttagacgtcacattggtgtcttcaccatcttcatccgtgat 22968052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 447 - 566
Target Start/End: Original strand, 2354040 - 2354159
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataaca 546  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||    
T  2354040 attagatttttgacccgtgctccgcttgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataaca 2354139  T
Q  547 cgtgataatacatagtagac 566  Q
     |||||||| ||||||||||    
T  2354140 tgtgataatccatagtagac 2354159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 638 - 789
Target Start/End: Original strand, 11642313 - 11642464
Alignment:
Q  638 aattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacattagacgttacattcg 737  Q
    ||||||||||||||| ||| ||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |    
T  11642313 aattcggtaaaagaaatataaaatttttagtacattgacatgtagtttcatcacacattgcgaaatacttcctcatatgcgacattagacgttacattgg 11642412  T
Q  738 tatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||| ||||||||||||  |||| | |||||||||||| |||||    
T  11642413 tatcttcaccattttcatcagtgatcaatatatttagtccttctctggatgt 11642464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 16375611 - 16375778
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||| ||||||||||||||||||| ||  |||||| |||||||||||||||||||| |||||||||||||||||||||||| |  ||||||||||     
T  16375611 cggtaatcttatcaataattcggtaaaaaaaaaatgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatactacatcatatacgacg 16375710  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||| ||||| ||||||||||||||||||||||||||  |||| | |||||||||||| |||||    
T  16375711 ttagacgtcacattggtatcttcaccatcttcatcagtgatcaatatctttagtccttctctggatgt 16375778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 16673995 - 16673877
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacac 547  Q
    |||||||||||| |||||||| || | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  16673995 tagatttttgactcatgctccactcgagtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaaataacac 16673896  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  16673895 gtgataattcatagtagac 16673877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 17648363 - 17648245
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacac 547  Q
    |||||||||||| |||||||| || | ||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||| ||||||||||    
T  17648363 tagatttttgactcatgctccactcgagtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaaataacac 17648264  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  17648263 gtgataattcatagtagac 17648245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 4681240 - 4681356
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||| | || ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||| ||||||||||||    
T  4681240 tagattttttatccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtg-aaaaataacacg 4681338  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  4681339 tgataatccatagtagac 4681356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 12140470 - 12140587
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| || ||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||    
T  12140470 tagatttttgatccgtgctccggtcgggttcattgtaaagggattgacatataaataataaaatgcaatatataataggtaacggtgaaaaaataacacg 12140569  T
Q  549 tgataatacatagtagac 566  Q
    |||||||  |||||||||    
T  12140570 tgataatctatagtagac 12140587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 22773520 - 22773637
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||| | ||||||||| |  ||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  22773520 tagatttttgacacgtgctccgctcgaatttattgtaaaaggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacg 22773619  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  22773620 tgataattcatagtagac 22773637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 30991765 - 30991648
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||| |||||||||||||    
T  30991765 tagatttttgacccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgataggtaacggtaaaaaaataacacg 30991666  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| |||| |||||    
T  30991665 tgataatccataatagac 30991648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 561
Target Start/End: Original strand, 40409174 - 40409285
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||| |||||||||||||||| || ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||    
T  40409174 tagatttatgacccatgctccgctcggatttattgtaaagggattgacatacgaa-aataaaatgcaatatataataggtaacggtgaaaaaataacacg 40409272  T
Q  549 tgataatacatag 561  Q
    ||||||| |||||    
T  40409273 tgataatccatag 40409285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 80; E-Value: 4e-37
Query Start/End: Original strand, 449 - 544
Target Start/End: Original strand, 32277651 - 32277746
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  32277651 tagattttttacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataa 32277746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 654 - 789
Target Start/End: Complemental strand, 45286648 - 45286509
Alignment:
Q  654 tatgaaatttttagtacattggcatgtaatttcatcacacattgcgaa----atacttccccatatacgacattagacgttacattcgtatcttcaccat 749  Q
    |||||||||||||||||||||||||||| ||||||||||||||| |||     ||||||| ||||||||||||||||||||||||| ||||||||| |||    
T  45286648 tatgaaatttttagtacattggcatgtagtttcatcacacattgtgaattacttacttcctcatatacgacattagacgttacattggtatcttcatcat 45286549  T
Q  750 cttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||  |||| | |||||||||||| |||||    
T  45286548 cttcatcagtgatcaatatctttagtccttctctggatgt 45286509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 2852829 - 2852946
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||  ||||||| |   |||||||||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||||||    
T  2852829 tagatttttgacctgtgctccgttcaagtttattgtaaagggattgacatacgaataataaaatgcaatatataataggcaacggtgaaaaaataacacg 2852928  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  2852929 tgataatccatagtagac 2852946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 623 - 716
Target Start/End: Complemental strand, 6250364 - 6250271
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatata 716  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||| ||||||    
T  6250364 ggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattgtcatgtagtttcatcacacattgcgaaatacttcctcatata 6250271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 11650274 - 11650157
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||| |||||| |||| |||| || ||||||||||||||||||||||| ||||||||||||||||||||| || | |||||||||||||||||||||    
T  11650274 tagatttctgacccgtgcttcgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgatagataacggtgaaaaaataacacg 11650175  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  11650174 tgataattcatagtagac 11650157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 45418299 - 45418416
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||||| ||  | |||||||||||||||||||||||  ||||||||||||||||||||||||| ||||||||||||||||||| |    
T  45418299 tagatttttgacccgtgctccactcagttttattgtaaagggattgacatacaaataataaaatgcaatatataattgataacggtgaaaaaataacatg 45418398  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  45418399 tgataatccatagtagac 45418416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 452 - 566
Target Start/End: Original strand, 4680517 - 4680631
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtga 551  Q
    ||||||||||| || ||| || ||||||||||||||| |||||||||| |||||||||||||||||||||||| ||||| ||||||||||||| ||||||    
T  4680517 atttttgacccgtgatccactcgggtttattgtaaagagattgacatacgaataataaaatgcaatatataataggtaaaggtgaaaaaataagacgtga 4680616  T
Q  552 taatacatagtagac 566  Q
    |||| ||||||||||    
T  4680617 taatccatagtagac 4680631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 9396451 - 9396334
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| ||||||| |||||| ||||||||||| |||||||||||| ||||||||||| | ||||||||||||||||||| |    
T  9396451 tagatttttgacccgtgctccgctcgggtttaatgtaaaaggattgacatacgaataataaaatacaatatataatagttaacggtgaaaaaataacatg 9396352  T
Q  549 tgataatacatagtagac 566  Q
    || |||| ||||||||||    
T  9396351 tggtaatccatagtagac 9396334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 446 - 566
Target Start/End: Original strand, 16362172 - 16362292
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataac 545  Q
    ||||||||||||||| | |  |||||| |||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||| ||| ||||||||     
T  16362172 tattagatttttgactcgtattccgctcgggtttattgtaaagggattgacatacgaataataaaatgcactatataataggtaactgtggaaaaataat 16362271  T
Q  546 acgtgataatacatagtagac 566  Q
    |||||||||| ||||||||||    
T  16362272 acgtgataatccatagtagac 16362292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 22325108 - 22325016
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||||||||||| | |||||||| |||| |||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  22325108 tagatttttgacccatgctccgctcgagtttattgaaaagagattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 22325016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 9140990 - 9141108
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    ||||||||||| || ||||| ||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||| ||||||||| ||||||||||||    
T  9140990 tagatttttgatccgtgctctgctcgggtttattgtaaagggattgacatacgaataataaaatgaaatatataattagtaacggtgaaaaaaataacac 9141089  T
Q  548 gtgataatacatagtagac 566  Q
    | | |||| ||||||||||    
T  9141090 gcggtaattcatagtagac 9141108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 21128887 - 21128795
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||||  |||||||| |||||||||||| ||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  21128887 tagatttttgacttatgctccgtttgggtttattggaaaggaattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 21128795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 452 - 544
Target Start/End: Complemental strand, 34838343 - 34838251
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||||| || || ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  34838343 atttttgacccgtgttctgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaataa 34838251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 447 - 566
Target Start/End: Complemental strand, 35125601 - 35125481
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataac 545  Q
    |||||||||||||| | ||||| ||| | |||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||| ||||||||||    
T  35125601 attagatttttgactcgtgctctgctcgagtttattgtaaagggattaatatatggataataaaatgcaatatataattggtaacggtgtaaaaaataac 35125502  T
Q  546 acgtgataatacatagtagac 566  Q
    | ||||||||  |||||||||    
T  35125501 atgtgataatttatagtagac 35125481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 449 - 544
Target Start/End: Original strand, 40449365 - 40449460
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||| |||| ||| ||| | |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||    
T  40449365 tagatttttaacccgtgccccgatcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaataa 40449460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 6250538 - 6250421
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa-aaaataacac 547  Q
    ||||||||||||||  |||||||   |||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||| ||||||||||    
T  6250538 tagatttttgacccg-gctccgcccaggtttattgtaaagggattgacatataaataataaaatgtaatatataattggtaacggtgaaaaaaataacac 6250440  T
Q  548 gtgataatacatagtagac 566  Q
     ||||||| |||| |||||    
T  6250439 atgataattcataatagac 6250421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 541
Target Start/End: Original strand, 1565954 - 1566043
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||| ||| | ||||||||||||||||||||| |||||||||||||    
T  1565954 atttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaacagtaaaatgcaatatataattgggaacggtgaaaaaa 1566043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 447 - 541
Target Start/End: Complemental strand, 18488013 - 18487919
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||| ||||||||||| ||||||||| |||||||| ||||||||||||||||| |||||||||||||||| || ||||||||||| |||||||||    
T  18488013 attaaatttttgacccgtgctccgctcgggtttatagtaaagggattgacatacgaataataaaatgcaaaatgtaattggtaacagtgaaaaaa 18487919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 451 - 541
Target Start/End: Complemental strand, 21225146 - 21225056
Alignment:
Q  451 gatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||| || |||| |||||||||||  |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  21225146 gatttttgacccgtgttccgtttgggtttatttcaaagagattgacatatgaataataaattgcaatatataattggtaacggtgaaaaaa 21225056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 63; E-Value: 6e-27
Query Start/End: Original strand, 622 - 696
Target Start/End: Original strand, 48639191 - 48639265
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacatt 696  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||| |||||||    
T  48639191 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtattttcattacacatt 48639265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 456 - 566
Target Start/End: Original strand, 48639025 - 48639134
Alignment:
Q  456 ttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataat 555  Q
    ||||||| ||||||||| || ||||||| |||  ||||||||||  |||||||||||| |||||||||||| |||||||| |||||||||||||||||||    
T  48639025 ttgacccgtgctccgctcggatttattgcaaatagattgacatacaaataataaaatgtaatatataattgataacggtg-aaaaataacacgtgataat 48639123  T
Q  556 acatagtagac 566  Q
     ||||||||||    
T  48639124 tcatagtagac 48639134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 622 - 702
Target Start/End: Complemental strand, 35125425 - 35125345
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaa 702  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||  |||||||| |||||||||| |||| ||||    
T  35125425 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacacgggcatgtagtttcatcacatattgtgaaa 35125345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 477 - 566
Target Start/End: Original strand, 22967792 - 22967882
Alignment:
Q  477 tttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    |||||||| ||||||||||||||  ||||||||||||||||||||||||||||| |||| |||||| |||| |||||||| ||||||||||    
T  22967792 tttattgttaagggattgacatacaaataataaaatgcaatatataattggtaagggtgaaaaaaagaacaggtgataatccatagtagac 22967882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 538
Target Start/End: Original strand, 5553564 - 5553653
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaa 538  Q
    |||||| ||||||| |||  ||| || ||||||||| |||||||||||||||||||||||||||| |||||||||||| ||| |||||||    
T  5553564 tagattgttgacccgtgcgacgcatgagtttattgttaagggattgacatatgaataataaaatgaaatatataattgataatggtgaaa 5553653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 449 - 526
Target Start/End: Original strand, 27711938 - 27712015
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattg 526  Q
    |||||||||||||| ||||||||| | ||||||| |||||  ||||||||| ||||||||||||||||||||||||||    
T  27711938 tagatttttgacccgtgctccgctcgagtttattataaagatattgacatacgaataataaaatgcaatatataattg 27712015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 16375462 - 16375529
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| |||||||| ||||| || |||||||||| |||||||||||||||||||||||||||    
T  16375462 gggtttattgttaagggattaacatacgagtaataaaatgtaatatataattggtaacggtgaaaaaa 16375529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 474 - 541
Target Start/End: Original strand, 40686182 - 40686249
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| |||||| ||||||||  ||||||||||||||||||||||||||||||| |||||||||    
T  40686182 gggtttattataaaggaattgacatgcgaataataaaatgcaatatataattggtaacagtgaaaaaa 40686249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 476 - 541
Target Start/End: Original strand, 16491641 - 16491706
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| |||||  ||  ||||||||||| ||||||||||||||||||||||||||||    
T  16491641 gtttattgtaaaggaattgatttacaaataataaaatacaatatataattggtaacggtgaaaaaa 16491706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 474 - 561
Target Start/End: Original strand, 11642168 - 11642256
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatag 561  Q
    |||||||||||||| | ||||| ||| ||| ||||||||||||||||||| |||||| |||| ||||||||| || ||||||| |||||    
T  11642168 gggtttattgtaaaagaattgatatacgaaaaataaaatgcaatatataaatggtaatggtgaaaaaaataatacatgataattcatag 11642256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 683 - 762
Target Start/End: Original strand, 45418504 - 45418581
Alignment:
Q  683 tttcatcacacattgcgaaatacttccccatatacgacattagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||||||||||||| |||||||||||   |||||||||||  |||||||||| |||| |||||||||||||| ||||||    
T  45418504 tttcatcacacattgtgaaatacttcct--tatacgacattgaacgttacattggtatattcaccatcttcataagtgat 45418581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 476 - 541
Target Start/End: Original strand, 24787383 - 24787448
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||| | ||||||||||||||  |||||||||||||||||||||||| ||||  |||||||||    
T  24787383 gtttattattaagggattgacataaaaataataaaatgcaatatataatttgtaaaagtgaaaaaa 24787448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 721 - 757
Target Start/End: Original strand, 48639471 - 48639507
Alignment:
Q  721 attagacgttacattcgtatcttcaccatcttcatca 757  Q
    ||||||||||||||| |||||||||||||||||||||    
T  48639471 attagacgttacatttgtatcttcaccatcttcatca 48639507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 652
Target Start/End: Complemental strand, 16673820 - 16673790
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaa 652  Q
    |||||||||||||||||||||||||||||||    
T  16673820 cggtaatcctatcaataattcggtaaaagaa 16673790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 622 - 652
Target Start/End: Complemental strand, 17648188 - 17648158
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaa 652  Q
    |||||||||||||||||||||||||||||||    
T  17648188 cggtaatcctatcaataattcggtaaaagaa 17648158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 113; Significance: 8e-57; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 622 - 762
Target Start/End: Original strand, 604039 - 604179
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  604039 cggtaatcctatcaataattcggtaaaagaaatatgaaatatttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacgacg 604138  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||| |||||||| ||||||||||||||||||||||||||    
T  604139 ttagatgttacattggtatcttcaccatcttcatcagtgat 604179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 107; E-Value: 3e-53
Query Start/End: Original strand, 623 - 789
Target Start/End: Complemental strand, 1199761 - 1199596
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacat 722  Q
    |||||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| |||||||||| |||||||||||||||| ||||||||||||    
T  1199761 ggtaattctatcaataattcggtaaaagaaatatgaaatttt-agtacattggcatgtagtttcatcacatattgcgaaatacttcctcatatacgacat 1199663  T
Q  723 tagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    ||||| ||||||| ||||||||||||||||||||||||||  |||| | |||| ||||||| |||||    
T  1199662 tagacattacattggtatcttcaccatcttcatcagtgatcaatatctttagtacttctctggatgt 1199596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 622 - 762
Target Start/End: Complemental strand, 44429789 - 44429649
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||  |||| ||||||    
T  44429789 cggtaatcctatcaataattcagtaaaagaaatatgaaatttttagtaccttggcatgtagtttcatcacacattgcgaaatacttcttcatacacgaca 44429690  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    |||||||||||||| |||||||||||||||| |||| ||||    
T  44429689 ttagacgttacattggtatcttcaccatctttatcaatgat 44429649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 100; E-Value: 5e-49
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 30437016 - 30437183
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||||||||| ||||||||| | ||||||| |||    
T  30437016 cggtaatcctatcaataattcggtaaaagaaatatgaaatctttagtacatcggcatgtagtttcatcacacattgtgaaatactttctcatatacaaca 30437115  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    |||||||||||||| |||||||||| ||||||||||| | |  |||| | |||||||||||| |||||    
T  30437116 ttagacgttacattggtatcttcactatcttcatcagcggtcaatatctttagtccttctctggatgt 30437183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 622 - 762
Target Start/End: Complemental strand, 44434546 - 44434406
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| | |||||||||||||||||||| ||||| ||||||||||||||||||||||||||  ||||||||||     
T  44434546 cggtaatcctatcaataattcggtaaaagaaatgtgaaatttttagtacattgggatgtagtttcatcacacattgcgaaatacttcttcatatacgacg 44434447  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||| ||||||||  |||||||| ||||||||||||||||    
T  44434446 ttagatgttacattgatatcttcatcatcttcatcagtgat 44434406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 1851292 - 1851125
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||| ||||||| ||||||||||| ||||||| || ||||||||||||||||| ||||||||||||||||||||||||||| |||||||| |     
T  1851292 cggtaatcctaacaataatccggtaaaagaaatatgaaaattctagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacggcg 1851193  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    ||||| || ||||| ||||||||||||||||||||||  ||  |||| | |||| |||||||||||||    
T  1851192 ttagatgtcacattggtatcttcaccatcttcatcagatatcaatatctttagttcttctcttgatgt 1851125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 622 - 789
Target Start/End: Complemental strand, 1852437 - 1852271
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||| ||||||| |||||||| ||  |||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||     
T  1852437 cggtaatcctaacaataatccggtaaaaaaaa-atgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcatatacgacg 1852339  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    ||||| || ||||| ||||||||||||||||||| |||| |  |||| | ||||||||||||||||||    
T  1852338 ttagatgtcacattggtatcttcaccatcttcattagtgttcaatatctttagtccttctcttgatgt 1852271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 453 - 566
Target Start/End: Complemental strand, 42046146 - 42046033
Alignment:
Q  453 tttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgat 552  Q
    |||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  42046146 tttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacagtgaaaaaataacacgtgat 42046047  T
Q  553 aatacatagtagac 566  Q
    ||| ||||||||||    
T  42046046 aattcatagtagac 42046033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 7e-42
Query Start/End: Original strand, 451 - 566
Target Start/End: Original strand, 37197296 - 37197411
Alignment:
Q  451 gatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtg 550  Q
    |||||||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||||||||||||||| |||||||||||||||||||||| ||    
T  37197296 gatttttgacccatgctccgatcgggtttattgtaaagggattgatatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacatg 37197395  T
Q  551 ataatacatagtagac 566  Q
    ||||| ||||||||||    
T  37197396 ataatccatagtagac 37197411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 87; E-Value: 3e-41
Query Start/End: Original strand, 622 - 768
Target Start/End: Complemental strand, 44433524 - 44433379
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||| |||||||||||||||| ||||| |||  |||| ||||||    
T  44433524 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattgacatgtagtttcatcacacattgcaaaatatttcttcatacacgaca 44433425  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatat 768  Q
    ||||||||||| || ||||||||||| ||| ||||| ||||| ||||    
T  44433424 ttagacgttaccttggtatcttcacc-tctccatcaatgattaatat 44433379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 83; E-Value: 7e-39
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 30436842 - 30436960
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggatt-gacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacac 547  Q
    |||||||||||||| ||||||||| |||||||||||||||||||| |||||| |||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  30436842 tagatttttgacccgtgctccgctcgggtttattgtaaagggatttgacatacgaataataaagtgcaatatataattgataacggtgaaaaaataatac 30436941  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  30436942 gtgataatccatagtagac 30436960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 78; E-Value: 7e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 1199935 - 1199818
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||||   ||||| ||| ||||||||||||||| ||||||||||||||||||||||||||||||  ||||| |||||||||||||||||||||    
T  1199935 tagatttttgacaagtgctctgctcgggtttattgtaaagtgattgacatatgaataataaaatgcaatatgcaattgataacggtgaaaaaataacacg 1199836  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  1199835 tgataatccatagtagac 1199818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 39921842 - 39921959
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||  || |||||||||||||    
T  39921842 tagatttttgacccgtgctttgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaatagttaaaaaataacacg 39921941  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| |||| |||||    
T  39921942 tgataatccatattagac 39921959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 446 - 544
Target Start/End: Complemental strand, 30206613 - 30206515
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||||||||||||||||||| |    |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||    
T  30206613 tattagatttttgacccatgctccgttcaaatttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacggtgaaaaaataa 30206515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 452 - 541
Target Start/End: Original strand, 23959905 - 23959994
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| ||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  23959905 atttttgacccgtgctccgtttgggtttattataaagggattgacatacgaataataaaatgcaatatataattggtaacgatgaaaaaa 23959994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 32063303 - 32063187
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||| | ||||||| | || ||||||||||||||||| ||||| |||||||||||||||||||||||| ||||||| ||||||||||||| |    
T  32063303 tagatttttgactcgtgctccg-tcggatttattgtaaagggattaacatacgaataataaaatgcaatatataataggtaacgatgaaaaaataacatg 32063205  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  32063204 tgataatccatagtagac 32063187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 3990893 - 3990770
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaata------tataattggtaacggtgaaaaaat 542  Q
    |||||||||||||| ||||||||| ||||||||||||||| | |||||||| ||||||||||||||||||      |||||| ||||| |||||||||||    
T  3990893 tagatttttgacccgtgctccgctcgggtttattgtaaagaggttgacataagaataataaaatgcaatatatatatataataggtaatggtgaaaaaat 3990794  T
Q  543 aacacgtgataatacatagtagac 566  Q
    ||||||||||||| ||||||||||    
T  3990793 aacacgtgataatccatagtagac 3990770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 23086466 - 23086374
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||||||||||| ||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||  ||||||||    
T  23086466 tagatttttgacccatgctccgctcgggtttactgtaaagggattgacatacggataataaaatgcaatatataattggtaacaatgaaaaaa 23086374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 476 - 560
Target Start/End: Complemental strand, 44434667 - 44434583
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacata 560  Q
    ||||||||||||| |||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||    
T  44434667 gtttattgtaaagcgattgacatacgaataataaaatgcaaaatataattggtaacggtgaaaaaataacacgtgataattcata 44434583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 476 - 566
Target Start/End: Original strand, 603891 - 603982
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  603891 gtttattgctaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataacacgtgataatccatagtagac 603982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 444 - 541
Target Start/End: Complemental strand, 9389592 - 9389495
Alignment:
Q  444 attattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||| |||||||||||| | ||||||||| || |||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  9389592 attactagatttttgactcgtgctccgctcggatttattataaaaggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 9389495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 14683496 - 14683404
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||| ||| | |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||||    
T  14683496 tagatttttgacccgtgctctgctcgagtttattgtaaagggattgacatacgaataataaaatgcaatacataattggtaacggtggaaaaa 14683404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 623 - 719
Target Start/End: Original strand, 31247989 - 31248085
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacga 719  Q
    ||||||||||||||||||| ||||||| || ||||||| ||||||||||| |||||||| |||||||||||||||| |||||||||| |||||||||    
T  31247989 ggtaatcctatcaataatttggtaaaaaaaatatgaaaattttagtacataggcatgtagtttcatcacacattgcaaaatacttcctcatatacga 31248085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 454 - 538
Target Start/End: Complemental strand, 35618101 - 35618017
Alignment:
Q  454 ttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaa 538  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||    
T  35618101 ttttgacccatgctccgctcgggtttcttgtaaaggaattgacatacgaataataaaatgcaatatataattgataacggtgaaa 35618017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 491 - 566
Target Start/End: Original strand, 3458793 - 3458868
Alignment:
Q  491 attgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||    
T  3458793 attgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacgtgataatccatagtagac 3458868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 38111797 - 38111705
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||  ||||| | | | |||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  38111797 tagatttttgacctgtgctctgttcgagtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacgatgaaaaaa 38111705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 625 - 709
Target Start/End: Complemental strand, 44015046 - 44014962
Alignment:
Q  625 taatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttcc 709  Q
    |||||||||||||||||| ||||||||| |||||||| |||||||||| |||||||| |||||||||||||||| || |||||||    
T  44015046 taatcctatcaataattcagtaaaagaaatatgaaatatttagtacataggcatgtagtttcatcacacattgcaaagtacttcc 44014962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 27852984 - 27853076
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||| ||| | ||||||||||||| |||| ||||| ||||||||||||||||||||||| ||||||  |||||||||    
T  27852984 tagatttttgacccgtgctctgctcgagtttattgtaaagagattaacatacgaataataaaatgcaatatataactggtaatagtgaaaaaa 27853076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 451 - 541
Target Start/End: Original strand, 34588435 - 34588519
Alignment:
Q  451 gatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||| ||||||||| |||||||||||||||||||||      |||||||||||||||||| |||||||||||| |||||||||    
T  34588435 gatttttgacccgtgctccgctcgggtttattgtaaagggattg------gaataataaaatgcaatacataattggtaacagtgaaaaaa 34588519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 480 - 566
Target Start/End: Complemental strand, 44015192 - 44015105
Alignment:
Q  480 attgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    |||||||||| ||||||||| ||||| ||||||||||||||||| ||||||  ||| |||||||||||||||||||| ||||||||||    
T  44015192 attgtaaaggtattgacatacgaatagtaaaatgcaatatataactggtaatagtgaaaaaaataacacgtgataattcatagtagac 44015105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 452 - 541
Target Start/End: Complemental strand, 34948326 - 34948237
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||| || |||| || | |||||||||||||| ||||||||||| ||||||||||||| ||||||||||||| ||||| |||||||    
T  34948326 atttttgagccgtgcttcgttcgggtttattgtaaatggattgacatacgaataataaaatgtaatatataattgggaacggcgaaaaaa 34948237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 41; E-Value: 0.00000000000008
Query Start/End: Original strand, 473 - 541
Target Start/End: Complemental strand, 14841089 - 14841021
Alignment:
Q  473 tgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||| ||| || ||||||| |||||| ||||| |||||| |||||||||||||||||||||    
T  14841089 tgggtttattgttaagagactgacatacgaataaaaaaatacaatatgtaattggtaacggtgaaaaaa 14841021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 502 - 539
Target Start/End: Original strand, 13461335 - 13461372
Alignment:
Q  502 aataataaaatgcaatatataattggtaacggtgaaaa 539  Q
    ||||||||||||||||||||||||||||||||||||||    
T  13461335 aataataaaatgcaatatataattggtaacggtgaaaa 13461372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 520 - 566
Target Start/End: Complemental strand, 44429891 - 44429844
Alignment:
Q  520 ataattggtaacggtgaa-aaaataacacgtgataatacatagtagac 566  Q
    |||||||||||||||||| |||||||||||||||||| |||| |||||    
T  44429891 ataattggtaacggtgaataaaataacacgtgataatccataatagac 44429844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 509 - 566
Target Start/End: Original strand, 31247874 - 31247932
Alignment:
Q  509 aaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    ||||||||||||||||||||||| ||| ||||||  ||| |||||||| ||||||||||    
T  31247874 aaatgcaatatataattggtaactgtgaaaaaaagtacatgtgataatccatagtagac 31247932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 108; Significance: 8e-54; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 108; E-Value: 8e-54
Query Start/End: Original strand, 622 - 789
Target Start/End: Original strand, 53047086 - 53047253
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||||||||||| |||||||||||    
T  53047086 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagcttcatcacacattgtgaaatacttcctcatatacgaca 53047185  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    ||| ||||||||||  ||| |||||||||||||||| ||||  |||| | |||||||||||| |||||    
T  53047186 ttaaacgttacattgttattttcaccatcttcatcactgatcaatatatttagtccttctctggatgt 53047253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 622 - 762
Target Start/End: Complemental strand, 17757916 - 17757776
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||      
T  17757916 cggtaatcctatcaataatttggtaaaagaaatatgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcgtatacgatg 17757817  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  17757816 ttagacgtcacattggtatcttcaccatcttcatcagtgat 17757776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 622 - 762
Target Start/End: Complemental strand, 19059236 - 19059096
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    |||||||||||||||||||| |||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| | |||||||      
T  19059236 cggtaatcctatcaataatttggtaaaagaaatatgaaaattttagtacattggcatgtagtttcatcacacattgcgaaatacttcctcgtatacgatg 19059137  T
Q  722 ttagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    |||||||| ||||| ||||||||||||||||||||||||||    
T  19059136 ttagacgtcacattggtatcttcaccatcttcatcagtgat 19059096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 97; E-Value: 3e-47
Query Start/End: Original strand, 625 - 789
Target Start/End: Complemental strand, 2702375 - 2702212
Alignment:
Q  625 taatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacatta 724  Q
    |||| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||    
T  2702375 taattctatcaataattcggtaaaagaa-tatgaaattcttagtacattggcatgtaatttcatcacacattgcgaaatacttcctcctataccacatta 2702277  T
Q  725 gacgttacattcgtatcttcaccatcttcatcagtgattgatatttgtagtccttctcttgatgt 789  Q
    ||||||||||| ||||||| ||||||||||| ||  ||  |||| | |||||||||||| |||||    
T  2702276 gacgttacattggtatcttgaccatcttcattagcaatcaatatctttagtccttctctagatgt 2702212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 449 - 562
Target Start/End: Original strand, 47501157 - 47501271
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||    
T  47501157 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaaataacac 47501256  T
Q  548 gtgataatacatagt 562  Q
    |||||||| ||||||    
T  47501257 gtgataatccatagt 47501271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 24366039 - 24365922
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||| || |||||| |||||||||||||| |    
T  24366039 tagatttttgacccgtgctccgctcgggtttattgtaaagagattgacatacgaataataaaatgcaatatatgataggtaacagtgaaaaaataacagg 24365940  T
Q  549 tgataatacatagtagac 566  Q
    ||||||||||||||||||    
T  24365939 tgataatacatagtagac 24365922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 37760969 - 37760852
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||    
T  37760969 tagatttttgacccgtgctctgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataacacg 37760870  T
Q  549 tgataatacatagtagac 566  Q
    | |||||  |||||||||    
T  37760869 taataatttatagtagac 37760852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 82; E-Value: 3e-38
Query Start/End: Original strand, 449 - 566
Target Start/End: Complemental strand, 23777335 - 23777218
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||| |||    
T  23777335 tagatttttgacccgtgctccgctcgggtttattgtaaagagattgacatatgaataataaaatgcaatatataataggtaatggtgaaaaaataatacg 23777236  T
Q  549 tgataatacatagtagac 566  Q
    | ||||| ||| ||||||    
T  23777235 taataatccatggtagac 23777218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 464 - 566
Target Start/End: Original strand, 53046928 - 53047030
Alignment:
Q  464 tgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagta 563  Q
    ||||||||| | |||||||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  53046928 tgctccgctcgagtttattgtaaatgaattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatccatagta 53047027  T
Q  564 gac 566  Q
    |||    
T  53047028 gac 53047030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 836818 - 836934
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||| | || |||||||| ||||||||||||| ||||||||||  ||||||||||||||||||||||| |||||||||| ||||||||||||    
T  836818 tagatttttgactcgtggtccgcttgagtttattgtaaagtgattgacatacaaataataaaatgcaatatataataggtaacggtg-aaaaataacacg 836916  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  836917 tgataatccatagtagac 836934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 2e-33
Query Start/End: Original strand, 449 - 562
Target Start/End: Original strand, 36642740 - 36642853
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| || ||||||||| | |||| ||||||||||||||||||| | |||||||||||||||||||||| |||||| ||||||||||||||||    
T  36642740 tagatttttgatccgtgctccgctcgagtttgttgtaaagggattgacatacggataataaaatgcaatatataataggtaacagtgaaaaaataacacg 36642839  T
Q  549 tgataatacatagt 562  Q
    ||||||| ||||||    
T  36642840 tgataatccatagt 36642853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 860770 - 860675
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    ||||||||| |||| |||||||||  |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  860770 tagattttttacccgtgctccgctctggtttattgtaaagagattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaataa 860675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 475 - 566
Target Start/End: Complemental strand, 46452642 - 46452551
Alignment:
Q  475 ggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    |||||||| |||||||||||| ||| |||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  46452642 ggtttattttaaagggattgatatacgaataataaaatgcaatatataatcggtaatggtgaaaaaataacacgtgataatacatagtagac 46452551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 20876489 - 20876583
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||| || |||||| || ||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  20876489 attagatttttgacccgtgttccgctcggatttattgtaaaaggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 20876583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 38886836 - 38886928
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| || ||||||||| | |||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  38886836 tagatttttgatccgtgctccgctcgagtttattgcaaagggattgacatataaataataaaatgcaatatataattggtaacggtgaaaaaa 38886928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 2702551 - 2702434
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa-taa 544  Q
    ||||||||||||||||| |||||    || |||||| |||||||||||  |||| |||||||||||| |||||||||||||||||||||||||||| |||    
T  2702551 tattagatttttgacccgtgctc----tgagtttatggtaaagggattaccatacgaataataaaatacaatatataattggtaacggtgaaaaaactaa 2702456  T
Q  545 cacgtgataatacatagtagac 566  Q
    ||||||||||| ||||||||||    
T  2702455 cacgtgataatccatagtagac 2702434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 51654822 - 51654730
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||  ||||||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||| |||| |||||||||    
T  51654822 tagatttttgaccggtgctccgctcgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattgataaccgtgaaaaaa 51654730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 10267462 - 10267370
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| | || ||||  ||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||||||||    
T  10267462 tagatttttgacccgtacttcgctctggtttattgtaaagggattgacatacgaataataaaatgtaatatataattggtaacgatgaaaaaa 10267370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 60; E-Value: 4e-25
Query Start/End: Original strand, 449 - 563
Target Start/End: Complemental strand, 11454869 - 11454754
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacac 547  Q
    ||||||||||| || ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||| |  | |||| ||| ||||||||||||    
T  11454869 tagatttttgatccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatatgaaagataacagtgaaaaaaataacac 11454770  T
Q  548 gtgataatacatagta 563  Q
     ||||||| |||||||    
T  11454769 atgataatccatagta 11454754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 6e-24
Query Start/End: Original strand, 449 - 562
Target Start/End: Original strand, 45514226 - 45514338
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| || |||||| | |||||| ||||| ||||||| ||| ||||||||||||||||||||| || ||||||||| ||||||||| | |    
T  45514226 tagatttttgacccgtgttccgctcgtgtttatcgtaaaaggattgatatacgaataataaaatgcaatatatgataggtaacggttaaaaaataa-atg 45514324  T
Q  549 tgataatacatagt 562  Q
    ||||||||||||||    
T  45514325 tgataatacatagt 45514338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 529
Target Start/End: Complemental strand, 11523399 - 11523319
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggta 529  Q
    |||||||||||| | ||||||||| ||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||    
T  11523399 tagatttttgactcgtgctccgctcgggttgattgtaaagggattgatatacgaataataaaatgcaatatataattggta 11523319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 474 - 565
Target Start/End: Original strand, 25916718 - 25916810
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtaga 565  Q
    ||||||||||| || ||||||||||||||| |||||||||||||||||||||||||||| || |||||| |||| | |||||| |||||||||    
T  25916718 gggtttattgttaaaggattgacatatgaaaaataaaatgcaatatataattggtaacgttgaaaaaaagaacaggcgataattcatagtaga 25916810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 495 - 555
Target Start/End: Complemental strand, 35560696 - 35560636
Alignment:
Q  495 acatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataat 555  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||    
T  35560696 acatatgaataataaaatgcaatatataataggtaacggtgaaaaaataacgcgtgataat 35560636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 446 - 512
Target Start/End: Complemental strand, 2730993 - 2730927
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaat 512  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||||||||||||| ||||||||||||    
T  2730993 tattagatttttgacacgtgctccgctcgggtttaatgtaaagggattgacatacgaataataaaat 2730927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 490 - 566
Target Start/End: Complemental strand, 17758051 - 17757972
Alignment:
Q  490 gattgacatatgaataataaaatgcaatatataattggtaacggtgaa---aaaataacacgtgataatacatagtagac 566  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||   |||| |||| |||||||| ||||||||||    
T  17758051 gattgacatacgaataataaaatgtaatatataattggtaacggtgaaaaaaaaagaacaggtgataatccatagtagac 17757972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 490 - 566
Target Start/End: Complemental strand, 19059371 - 19059292
Alignment:
Q  490 gattgacatatgaataataaaatgcaatatataattggtaacggtgaa---aaaataacacgtgataatacatagtagac 566  Q
    |||||||||| ||||||||||||| |||||||||||||||||||||||   |||| |||| |||||||| ||||||||||    
T  19059371 gattgacatacgaataataaaatgtaatatataattggtaacggtgaaaaaaaaagaacaggtgataatccatagtagac 19059292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 489 - 566
Target Start/End: Complemental strand, 43017717 - 43017641
Alignment:
Q  489 ggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    ||||||||||| ||| |||||| || |||||||||| ||||||||| |||||||||||||||||||| ||||||||||    
T  43017717 ggattgacatacgaaaaataaa-tgtaatatataataggtaacggtaaaaaaataacacgtgataatccatagtagac 43017641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 493 - 566
Target Start/End: Complemental strand, 11454201 - 11454126
Alignment:
Q  493 tgacatatgaataataaaatgcaatatata--attggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    |||||||  |||||||||||||||||| |   || ||||| |||||||||||||||||||||||| ||||||||||    
T  11454201 tgacatacaaataataaaatgcaatatgtgtgataggtaatggtgaaaaaataacacgtgataatccatagtagac 11454126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 528 - 566
Target Start/End: Original strand, 35960256 - 35960294
Alignment:
Q  528 taacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  35960256 taacggtgaaaaaataacacgtgataattcatagtagac 35960294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000005
Query Start/End: Original strand, 686 - 762
Target Start/End: Complemental strand, 21800034 - 21799958
Alignment:
Q  686 catcacacattgcgaaatacttccccatatacgacattagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||| ||||| |||||||||||| |||| || |||||||| |||| ||| || || |||||||||||||| |||||    
T  21800034 catcagacatttcgaaatacttcctcatacaccacattagatgttagatttgtgtcatcaccatcttcatcggtgat 21799958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 475 - 525
Target Start/End: Complemental strand, 25938559 - 25938511
Alignment:
Q  475 ggtttattgtaaagggattgacatatgaataataaaatgcaatatataatt 525  Q
    |||||||||| ||||||||  |||||||||||||||||| |||||||||||    
T  25938559 ggtttattgttaagggatt--catatgaataataaaatgtaatatataatt 25938511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold1155
Description:

Target: scaffold1155; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 623 - 762
Target Start/End: Original strand, 656 - 795
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacat 722  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||  ||||||||| |    
T  656 ggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattgacatgtgatttcatcacacattgcaaaacacttccttatatacgacgt 755  T
Q  723 tagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  756 tagacgttacattggtatcttcaccatcttcatcagtgat 795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1155; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 564
Target Start/End: Original strand, 507 - 597
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaa-aataacacgtgataatacatagtag 564  Q
    ||||||||| |||||||||| ||||| |||| ||||| | |||||||||||| |||||  |||||| |||||||||||||||| ||||||||    
T  507 gggtttattataaagggattaacatacgaatcataaatt-caatatataattagtaacaatgaaaaaaataacacgtgataatccatagtag 597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0345
Description:

Target: scaffold0345; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 623 - 762
Target Start/End: Complemental strand, 9561 - 9422
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacat 722  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||  ||||||||| |    
T  9561 ggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattgacatgtgatttcatcacacattgcaaaacacttccttatatacgacgt 9462  T
Q  723 tagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  9461 tagacgttacattggtatcttcaccatcttcatcagtgat 9422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0345; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 564
Target Start/End: Complemental strand, 9710 - 9620
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa-taacacgtgataatacatagtag 564  Q
    ||||||||| |||||||||| ||||| |||| ||||| | |||||||||||| |||||  |||||||| |||||||||||||| ||||||||    
T  9710 gggtttattataaagggattaacatacgaatcataaatt-caatatataattagtaacaatgaaaaaaataacacgtgataatccatagtag 9620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 623 - 762
Target Start/End: Original strand, 29419 - 29558
Alignment:
Q  623 ggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgacat 722  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||| ||||||||||||||||| ||| ||||||  ||||||||| |    
T  29419 ggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattgacatgtgatttcatcacacattgcaaaacacttccttatatacgacgt 29518  T
Q  723 tagacgttacattcgtatcttcaccatcttcatcagtgat 762  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  29519 tagacgttacattggtatcttcaccatcttcatcagtgat 29558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0105; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 474 - 564
Target Start/End: Original strand, 29270 - 29360
Alignment:
Q  474 gggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaa-aataacacgtgataatacatagtag 564  Q
    ||||||||| |||||||||| ||||| |||| ||||| | |||||||||||| |||||  |||||| |||||||||||||||| ||||||||    
T  29270 gggtttattataaagggattaacatacgaatcataaatt-caatatataattagtaacaatgaaaaaaataacacgtgataatccatagtag 29360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 1e-46; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 622 - 745
Target Start/End: Original strand, 20639980 - 20640103
Alignment:
Q  622 cggtaatcctatcaataattcggtaaaagaactatgaaatttttagtacattggcatgtaatttcatcacacattgcgaaatacttccccatatacgaca 721  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| ||||| |||||||||| |||||| ||||    
T  20639980 cggtaatcctatcaataattcggtaaaagaaatatgaaatttttagtacattggcatgtagtttcatcacaaattgcaaaatacttcctcatataagaca 20640079  T
Q  722 ttagacgttacattcgtatcttca 745  Q
    |||||||||||||| |||||||||    
T  20640080 ttagacgttacattggtatcttca 20640103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 12896042 - 12896159
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  12896042 tagatttttgacccatgctccgctcgggtttatcgtaaagggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataatacg 12896141  T
Q  549 tgataatacatagtagac 566  Q
    ||||||| ||||||||||    
T  12896142 tgataatccatagtagac 12896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 449 - 564
Target Start/End: Original strand, 44543362 - 44543477
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| |||    
T  44543362 tagatttttgacccgtgctccgctcgggtttattgtaaatggattgacatacgaataataaaatgcaatatataataggtaacggtgaaaaaataatacg 44543461  T
Q  549 tgataatacatagtag 564  Q
    |||||||  |||||||    
T  44543462 tgataatctatagtag 44543477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 81; E-Value: 1e-37
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 833282 - 833374
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  833282 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 833374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 447 - 541
Target Start/End: Complemental strand, 11658329 - 11658235
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||| ||||||||| |||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  11658329 attagatttttgacccgtgctccgctcgggtttattgtaaaggcattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 11658235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 2131974 - 2132066
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||    
T  2131974 tagatttttgacccgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaaccgtgaaaaaa 2132066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 565
Target Start/End: Complemental strand, 12898723 - 12898607
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||||||||   |||||||||||||||||||||||  |||||||||||| ||||||||||| |||||||||||||||||||||||    
T  12898723 tagatttttgacccgtgctccgctcaagtttattgtaaagggattgacatgcgaataataaaatacaatatataataggtaacggtgaaaaaataacacg 12898624  T
Q  549 tgataatacatagtaga 565  Q
    ||||||| |||| ||||    
T  12898623 tgataatccataataga 12898607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 3e-35
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 37130761 - 37130853
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  37130761 tagatttttgactcgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 37130853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 446 - 541
Target Start/End: Original strand, 8430563 - 8430657
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8430563 tattagatttttgactcgtgctccgcttgggtttattgtaaagg-attgacatacgaataataaaatgcaatatataattggtaacggtgaaaaaa 8430657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 76; E-Value: 1e-34
Query Start/End: Original strand, 449 - 564
Target Start/End: Complemental strand, 29550818 - 29550703
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||  ||||||||| | |||||||||||| ||||||||||| |||||||||||| || |||||||| |||||||||||||||||||||||    
T  29550818 tagatttttgacctgtgctccgctcgagtttattgtaaatggattgacatacgaataataaaatacagtatataataggtaacggtgaaaaaataacacg 29550719  T
Q  549 tgataatacatagtag 564  Q
    ||||||| ||||||||    
T  29550718 tgataattcatagtag 29550703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 452 - 566
Target Start/End: Complemental strand, 6348558 - 6348444
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtga 551  Q
    |||||||||||  |||||||| | |||||||||||||||||||| ||| ||| |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  6348558 atttttgacccgcgctccgctcgagtttattgtaaagggattgatatacgaaaaataaaatgcaatatataataggtaaaggtgaaaaaataacacgtga 6348459  T
Q  552 taatacatagtagac 566  Q
    |||| ||||||||||    
T  6348458 taatccatagtagac 6348444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 10128784 - 10128876
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||  ||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||||||||    
T  10128784 tagatttttgacctgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgaaatatataattggtagcggtgaaaaaa 10128876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 14335829 - 14335921
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||| | ||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||| |||||||||    
T  14335829 tagatttttgactcgtgctccgctcgggtttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacagtgaaaaaa 14335921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 69; E-Value: 2e-30
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 41327244 - 41327152
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| |||| ||||||||| || ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||    
T  41327244 tagatttttaacccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataattgataacggtgaaaaaa 41327152  T

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Target: chr2; HSP #15
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 11736936 - 11736844
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| || ||||||||| || ||||||||||||||||||||||| ||||||||||||||||||||||| ||||||| |||||||||    
T  11736936 tagatttttgatccgtgctccgctcggatttattgtaaagggattgacatacgaataataaaatgcaatatataactggtaacagtgaaaaaa 11736844  T

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Target: chr2; HSP #16
Raw Score: 65; E-Value: 4e-28
Query Start/End: Original strand, 449 - 541
Target Start/End: Original strand, 28611524 - 28611616
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| |  || |||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||| |||||||||    
T  28611524 tagatttttgatcagtgttccgcttgggtttattgtaaagggattgacatacaaataataaaatgcaatatataattggtaacagtgaaaaaa 28611616  T

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Target: chr2; HSP #17
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 532
Target Start/End: Original strand, 20639781 - 20639864
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacg 532  Q
    ||||||||| |||| ||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||    
T  20639781 tagattttttacccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatgcaatatataattggtaacg 20639864  T

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Target: chr2; HSP #18
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 20709683 - 20709588
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    |||||||||||||  || |||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  20709683 tagatttttgacctgtgatccgcttgagtttatcgtaaaggaattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaataa 20709588  T

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Target: chr2; HSP #19
Raw Score: 61; E-Value: 9e-26
Query Start/End: Original strand, 449 - 541
Target Start/End: Complemental strand, 17370756 - 17370664
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||| | ||||||| || |||||||||||| |||||||||| |||||||||||| |||||||||||||||||| |||||||||    
T  17370756 tagatttttgacccgtactccgctcggatttattgtaaagagattgacatacgaataataaaatacaatatataattggtaacagtgaaaaaa 17370664  T

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Target: chr2; HSP #20
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 449 - 564
Target Start/End: Original strand, 27351509 - 27351625
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtga-aaaaataacac 547  Q
    |||||| ||||||| |||  |||  ||||||||||  |||||||||||||| |||||||||||||||||||||||||||||||||||| ||||| || |     
T  27351509 tagattgttgacccgtgcgtcgcacgggtttattgataagggattgacatacgaataataaaatgcaatatataattggtaacggtgacaaaaagaataa 27351608  T
Q  548 gtgataatacatagtag 564  Q
    |||||||| ||||||||    
T  27351609 gtgataatccatagtag 27351625  T

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Target: chr2; HSP #21
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 562
Target Start/End: Complemental strand, 19640606 - 19640494
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| | || ||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||| || | ||||||| ||||||||| | |    
T  19640606 tagatttttgatctatactccgctcgggtttatagtaaagggattgatatacgaatgataaaatgcaatatatgatagataacggttaaaaaataa-atg 19640508  T
Q  549 tgataatacatagt 562  Q
    ||||||||||||||    
T  19640507 tgataatacatagt 19640494  T

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Target: chr2; HSP #22
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 449 - 562
Target Start/End: Complemental strand, 19839199 - 19839087
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    ||||||||||| | || ||||||| |||||||| ||||||||||||| ||| |||| |||||||||||||||| || | ||||||| ||||||||| | |    
T  19839199 tagatttttgatctatactccgctcgggtttatagtaaagggattgatatacgaatgataaaatgcaatatatgatagataacggttaaaaaataa-atg 19839101  T
Q  549 tgataatacatagt 562  Q
    ||||||||||||||    
T  19839100 tgataatacatagt 19839087  T

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Target: chr2; HSP #23
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 477 - 566
Target Start/End: Complemental strand, 44257109 - 44257020
Alignment:
Q  477 tttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    |||||||||||| |||||| ||| |||||||||||||||||||||||| | |||  ||||||||||||||||||||||| ||| ||||||    
T  44257109 tttattgtaaagagattgatatacgaataataaaatgcaatatataatagataatagtgaaaaaataacacgtgataatccattgtagac 44257020  T

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Target: chr2; HSP #24
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 455 - 566
Target Start/End: Complemental strand, 628063 - 627954
Alignment:
Q  455 tttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacgtgataa 554  Q
    |||||| | ||||||| | || |||||||||||| |||||| ||| ||||||||||||| ||||||||||  |||||||| |||||||||||||||||||    
T  628063 tttgactcgtgctccgttcggatttattgtaaagagattgagatacgaataataaaatgtaatatataat--gtaacggtaaaaaaataacacgtgataa 627966  T
Q  555 tacatagtagac 566  Q
    | ||||| ||||    
T  627965 tccatagcagac 627954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 566
Target Start/End: Complemental strand, 11131800 - 11131708
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaa--aaaataacacgtgataatacatagtagac 566  Q
    ||||||||| ||| |||||||| | |||||||||||||||||||||||||| ||||||||||  |||| |||| |||||||| ||||||||||    
T  11131800 gtttattgttaagagattgacaaacgaataataaaatgcaatatataattgataacggtgaaaaaaaagaacaggtgataatccatagtagac 11131708  T

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Target: chr2; HSP #26
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 476 - 541
Target Start/End: Original strand, 30556866 - 30556931
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||| || ||||||| |||| ||||||||||||||||||||||||||||||||||||||||    
T  30556866 gtttattgttaaaggattgaaatataaataataaaatgcaatatataattggtaacggtgaaaaaa 30556931  T

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Target: chr2; HSP #27
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 447 - 541
Target Start/End: Original strand, 41995018 - 41995113
Alignment:
Q  447 attagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatg-aataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    |||||||||||||||| |  |||||| || |||||| |||||||||||| | | | |||||| ||||||| |||||||||||||||| ||||||||    
T  41995018 attagatttttgacccgtattccgctcggatttattataaagggattgatagacggaataatgaaatgcactatataattggtaacgatgaaaaaa 41995113  T

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Target: scaffold0018 (Bit Score: 79; Significance: 2e-36; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 163386 - 163504
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacacg 548  Q
    |||||||||||||| |||||| || |||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||| |||||||||||| ||    
T  163386 tagatttttgacccgtgctccactcgggtttattgtaaagggattgacatacgaataataaaatgcaatatgtaataggtaacgatgaaaaaataacccg 163485  T
Q  549 tgataata-catagtagac 566  Q
    |||||||| ||||||||||    
T  163486 tgataataccatagtagac 163504  T

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Target: scaffold0504 (Bit Score: 71; Significance: 1e-31; HSPs: 1)
Name: scaffold0504
Description:

Target: scaffold0504; HSP #1
Raw Score: 71; E-Value: 1e-31
Query Start/End: Original strand, 449 - 566
Target Start/End: Original strand, 1334 - 1452
Alignment:
Q  449 tagatttttga-cccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataacac 547  Q
    ||||||||||| ||| ||||||||| |||||||||||||||||||||||| | |||||||||||| |||||||| || |||||| ||||||||||||||     
T  1334 tagatttttgatcccgtgctccgctcgggtttattgtaaagggattgacaaacgaataataaaatacaatatatgataggtaacagtgaaaaaataacat 1433  T
Q  548 gtgataatacatagtagac 566  Q
    |||||||| ||||||||||    
T  1434 gtgataatccatagtagac 1452  T

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Target: scaffold0294 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 452 - 541
Target Start/End: Original strand, 12134 - 12223
Alignment:
Q  452 atttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaa 541  Q
    ||||||||||| ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| ||||| ||||||||    
T  12134 atttttgacccgtgctccgctcgggtttattgtaaagtgattgacatatgaataataaaatgcaatatgtaattgataacgatgaaaaaa 12223  T

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Target: scaffold0240 (Bit Score: 66; Significance: 9e-29; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 66; E-Value: 9e-29
Query Start/End: Original strand, 446 - 566
Target Start/End: Complemental strand, 13750 - 13629
Alignment:
Q  446 tattagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataa 544  Q
    ||||||||||||||||| ||||| ||| ||||||| ||||||||||||||||||   ||||||||||||| |||||||| ||||| |||| |||||||||    
T  13750 tattagatttttgacccgtgctcagctcgggtttaatgtaaagggattgacatacagataataaaatgcactatataataggtaatggtgaaaaaaataa 13651  T
Q  545 cacgtgataatacatagtagac 566  Q
    ||||||||| | ||||||||||    
T  13650 cacgtgatactccatagtagac 13629  T

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Target: scaffold0097 (Bit Score: 64; Significance: 1e-27; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 449 - 544
Target Start/End: Complemental strand, 13522 - 13427
Alignment:
Q  449 tagatttttgacccatgctccgcttgggtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtgaaaaaataa 544  Q
    |||||||||||||  || |||||||| |||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||| ||||||||||||    
T  13522 tagatttttgacctgtgatccgcttgagtttatcgtaaaggaattgacatacgaataataaaatgcaatatataattggtaacagtgaaaaaataa 13427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 476 - 566
Target Start/End: Original strand, 11999 - 12090
Alignment:
Q  476 gtttattgtaaagggattgacatatgaataataaaatgcaatatataattggtaacggtg-aaaaaataacacgtgataatacatagtagac 566  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||||| |||| ||| |||||| |||| |||||||  ||||||||||    
T  11999 gtttattattaagggattgacatatgaataataaaatgcaatatataattgataacagtgaaaaaaagaacaggtgataaaccatagtagac 12090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 521 - 566
Target Start/End: Original strand, 14264 - 14309
Alignment:
Q  521 taattggtaacggtgaaaaaataacacgtgataatacatagtagac 566  Q
    |||| ||||| ||| ||||||||||| |||||||||||||||||||    
T  14264 taataggtaatggtaaaaaaataacatgtgataatacatagtagac 14309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 475 - 524
Target Start/End: Complemental strand, 16643 - 16594
Alignment:
Q  475 ggtttattgtaaagggattgacatatgaataataaaatgcaatatataat 524  Q
    ||||||||||| |   ||||||||| ||||||||||||||||||||||||    
T  16643 ggtttattgtacaataattgacatacgaataataaaatgcaatatataat 16594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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