View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8483_low_10 (Length: 300)

Name: NF8483_low_10
Description: NF8483
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8483_low_10
NF8483_low_10
[»] scaffold0011 (1 HSPs)
scaffold0011 (19-234)||(232008-232223)
[»] chr8 (36 HSPs)
chr8 (234-300)||(14666168-14666234)
chr8 (233-300)||(2467215-2467282)
chr8 (234-300)||(13085471-13085537)
chr8 (234-300)||(44893375-44893441)
chr8 (234-300)||(1013074-1013140)
chr8 (234-300)||(6100419-6100485)
chr8 (234-300)||(8141049-8141115)
chr8 (234-300)||(34846761-34846826)
chr8 (234-300)||(38922511-38922577)
chr8 (233-300)||(3418610-3418677)
chr8 (234-300)||(45521116-45521182)
chr8 (234-294)||(10535506-10535566)
chr8 (233-300)||(6940504-6940571)
chr8 (234-300)||(9860092-9860159)
chr8 (233-300)||(15884652-15884719)
chr8 (233-296)||(24837188-24837251)
chr8 (241-300)||(33401896-33401955)
chr8 (234-300)||(14846523-14846589)
chr8 (234-300)||(22810027-22810093)
chr8 (258-297)||(11785887-11785926)
chr8 (245-300)||(17981399-17981454)
chr8 (245-284)||(35496367-35496406)
chr8 (234-300)||(10927553-10927619)
chr8 (234-280)||(18091348-18091394)
chr8 (234-300)||(24938659-24938725)
chr8 (234-300)||(34613875-34613941)
chr8 (234-300)||(43027252-43027318)
chr8 (248-293)||(7673758-7673803)
chr8 (241-281)||(68214-68254)
chr8 (234-294)||(17845680-17845740)
chr8 (233-300)||(16893883-16893950)
chr8 (241-300)||(18373964-18374023)
chr8 (234-300)||(583761-583827)
chr8 (234-294)||(29933720-29933780)
chr8 (233-297)||(30903282-30903346)
chr8 (234-294)||(34723726-34723786)
[»] chr6 (29 HSPs)
chr6 (233-300)||(9179833-9179900)
chr6 (234-300)||(21898595-21898661)
chr6 (233-300)||(2271398-2271465)
chr6 (233-300)||(8612071-8612138)
chr6 (233-300)||(14107455-14107522)
chr6 (234-300)||(13468880-13468946)
chr6 (233-300)||(6606194-6606261)
chr6 (234-300)||(3030715-3030781)
chr6 (234-300)||(5253320-5253386)
chr6 (234-300)||(21016848-21016914)
chr6 (232-300)||(10311566-10311634)
chr6 (241-300)||(9147255-9147314)
chr6 (245-300)||(13036101-13036156)
chr6 (233-284)||(15643941-15643992)
chr6 (233-300)||(24671963-24672030)
chr6 (234-300)||(19089445-19089511)
chr6 (234-300)||(29333235-29333301)
chr6 (232-300)||(3588042-3588110)
chr6 (234-294)||(8938658-8938718)
chr6 (234-282)||(19230672-19230720)
chr6 (233-300)||(5759574-5759641)
chr6 (234-300)||(8932608-8932674)
chr6 (234-300)||(8944074-8944140)
chr6 (233-295)||(12606376-12606438)
chr6 (255-300)||(30788948-30788993)
chr6 (239-300)||(34954716-34954776)
chr6 (252-300)||(12635779-12635827)
chr6 (245-300)||(29444862-29444917)
chr6 (234-282)||(17115012-17115060)
[»] chr5 (49 HSPs)
chr5 (233-300)||(30349522-30349589)
chr5 (233-300)||(42861315-42861382)
chr5 (234-300)||(19572668-19572734)
chr5 (232-300)||(5732017-5732085)
chr5 (232-300)||(41163556-41163624)
chr5 (233-300)||(9812815-9812882)
chr5 (233-300)||(12704957-12705024)
chr5 (234-300)||(1538375-1538441)
chr5 (234-300)||(6767148-6767214)
chr5 (234-300)||(18136377-18136443)
chr5 (234-300)||(42086271-42086337)
chr5 (234-298)||(20255313-20255377)
chr5 (233-300)||(12766074-12766141)
chr5 (233-300)||(28857071-28857138)
chr5 (241-300)||(35813095-35813154)
chr5 (233-300)||(39728330-39728397)
chr5 (234-300)||(28856921-28856987)
chr5 (234-300)||(35403609-35403675)
chr5 (233-298)||(5079274-5079339)
chr5 (232-300)||(2485139-2485207)
chr5 (232-300)||(20525780-20525848)
chr5 (244-300)||(25417280-25417336)
chr5 (234-294)||(26077085-26077145)
chr5 (233-300)||(3654009-3654076)
chr5 (233-300)||(7866524-7866591)
chr5 (242-300)||(1898953-1899011)
chr5 (234-300)||(8513463-8513529)
chr5 (234-284)||(23383592-23383642)
chr5 (234-300)||(14974421-14974485)
chr5 (245-300)||(16755016-16755071)
chr5 (241-300)||(20692884-20692943)
chr5 (234-300)||(37263185-37263251)
chr5 (234-282)||(4016370-4016418)
chr5 (233-277)||(14728025-14728069)
chr5 (232-300)||(38297061-38297129)
chr5 (241-300)||(7308461-7308520)
chr5 (241-300)||(14152001-14152060)
chr5 (241-300)||(23247448-23247507)
chr5 (241-300)||(24498934-24498993)
chr5 (234-293)||(35561922-35561981)
chr5 (241-280)||(42292140-42292179)
chr5 (234-296)||(9168353-9168414)
chr5 (255-297)||(13664225-13664267)
chr5 (232-282)||(24500092-24500142)
chr5 (255-300)||(20223021-20223066)
chr5 (255-300)||(38897815-38897860)
chr5 (244-300)||(18327724-18327780)
chr5 (241-293)||(25950686-25950738)
chr5 (249-293)||(28862784-28862828)
[»] chr2 (46 HSPs)
chr2 (233-300)||(3643984-3644051)
chr2 (234-300)||(7747217-7747283)
chr2 (234-300)||(19976904-19976970)
chr2 (241-300)||(21286394-21286453)
chr2 (234-300)||(34356149-34356215)
chr2 (234-300)||(38005345-38005411)
chr2 (234-300)||(38962706-38962772)
chr2 (234-300)||(331444-331510)
chr2 (234-300)||(2550811-2550877)
chr2 (241-295)||(6358253-6358307)
chr2 (234-300)||(18902627-18902693)
chr2 (234-300)||(23500779-23500844)
chr2 (235-296)||(41187793-41187854)
chr2 (234-297)||(12864167-12864230)
chr2 (234-297)||(21180414-21180477)
chr2 (233-300)||(29422157-29422224)
chr2 (233-300)||(33005694-33005761)
chr2 (234-300)||(8410074-8410140)
chr2 (234-300)||(10046573-10046639)
chr2 (234-300)||(11069821-11069887)
chr2 (234-300)||(14169706-14169772)
chr2 (234-300)||(15079426-15079492)
chr2 (234-300)||(20612633-20612699)
chr2 (250-300)||(25540501-25540551)
chr2 (234-300)||(42770748-42770814)
chr2 (234-295)||(14853469-14853530)
chr2 (241-294)||(20963212-20963265)
chr2 (255-300)||(41220599-41220644)
chr2 (232-300)||(2528438-2528506)
chr2 (234-294)||(22593078-22593138)
chr2 (245-296)||(35946693-35946744)
chr2 (241-300)||(39806982-39807041)
chr2 (234-300)||(9360845-9360911)
chr2 (234-300)||(41032003-41032068)
chr2 (260-300)||(10823029-10823069)
chr2 (244-300)||(25549681-25549737)
chr2 (234-297)||(2149295-2149358)
chr2 (245-300)||(7787010-7787065)
chr2 (233-300)||(13026508-13026575)
chr2 (239-282)||(34722629-34722672)
chr2 (241-300)||(37560123-37560182)
chr2 (241-300)||(45263764-45263823)
chr2 (234-300)||(10026713-10026779)
chr2 (234-300)||(44945537-44945603)
chr2 (255-300)||(16034901-16034946)
chr2 (259-300)||(34346384-34346425)
[»] chr1 (46 HSPs)
chr1 (233-300)||(41743216-41743283)
chr1 (234-300)||(5855466-5855532)
chr1 (235-300)||(41663954-41664019)
chr1 (233-300)||(49078057-49078124)
chr1 (255-300)||(34334393-34334438)
chr1 (232-300)||(8763933-8764001)
chr1 (229-300)||(11397986-11398057)
chr1 (234-300)||(10422732-10422798)
chr1 (234-300)||(18915811-18915877)
chr1 (234-300)||(40288575-40288641)
chr1 (234-300)||(48798168-48798234)
chr1 (232-297)||(33418216-33418281)
chr1 (241-297)||(10173072-10173128)
chr1 (232-300)||(31152658-31152726)
chr1 (241-300)||(892395-892454)
chr1 (233-300)||(34877933-34878000)
chr1 (241-300)||(47312996-47313055)
chr1 (234-300)||(2981029-2981095)
chr1 (232-282)||(12036860-12036910)
chr1 (234-300)||(17358569-17358635)
chr1 (234-300)||(31576645-31576711)
chr1 (241-297)||(1764290-1764346)
chr1 (248-300)||(9659276-9659328)
chr1 (244-300)||(45361980-45362036)
chr1 (241-300)||(2567227-2567286)
chr1 (233-300)||(26325755-26325822)
chr1 (241-299)||(32822-32880)
chr1 (234-299)||(8905249-8905314)
chr1 (235-300)||(42744732-42744797)
chr1 (241-293)||(5063948-5064000)
chr1 (232-300)||(15238204-15238272)
chr1 (256-296)||(16956432-16956472)
chr1 (241-281)||(32151039-32151079)
chr1 (234-293)||(5503975-5504034)
chr1 (245-300)||(9853375-9853430)
chr1 (257-296)||(14254370-14254409)
chr1 (233-300)||(15465908-15465975)
chr1 (233-300)||(17642102-17642169)
chr1 (234-293)||(33004120-33004179)
chr1 (233-300)||(50503459-50503526)
chr1 (246-300)||(10336472-10336526)
chr1 (234-300)||(51437413-51437479)
chr1 (231-300)||(34697276-34697345)
chr1 (233-297)||(25165345-25165408)
chr1 (244-300)||(30927825-30927881)
chr1 (256-300)||(34719742-34719786)
[»] chr7 (41 HSPs)
chr7 (234-300)||(48804629-48804695)
chr7 (233-300)||(22268126-22268193)
chr7 (234-300)||(43925458-43925524)
chr7 (234-296)||(47341822-47341884)
chr7 (232-300)||(4228848-4228916)
chr7 (245-300)||(1797417-1797472)
chr7 (241-300)||(9685692-9685751)
chr7 (233-300)||(13095803-13095870)
chr7 (234-296)||(4195303-4195365)
chr7 (250-300)||(10047973-10048023)
chr7 (234-300)||(43346876-43346942)
chr7 (236-300)||(34659174-34659238)
chr7 (233-300)||(22993464-22993531)
chr7 (233-300)||(27028224-27028291)
chr7 (233-300)||(34127717-34127784)
chr7 (233-300)||(43862069-43862136)
chr7 (234-300)||(17748479-17748545)
chr7 (246-300)||(18785627-18785681)
chr7 (233-296)||(5039519-5039582)
chr7 (241-300)||(5069912-5069971)
chr7 (246-297)||(16802081-16802132)
chr7 (233-300)||(21530693-21530760)
chr7 (233-300)||(22973912-22973979)
chr7 (234-297)||(27875188-27875250)
chr7 (241-300)||(42032049-42032108)
chr7 (250-297)||(42210362-42210409)
chr7 (234-300)||(14650263-14650329)
chr7 (234-300)||(26423384-26423450)
chr7 (234-296)||(45960104-45960165)
chr7 (233-282)||(19914817-19914866)
chr7 (232-300)||(1605885-1605953)
chr7 (245-293)||(11607088-11607136)
chr7 (241-284)||(4706097-4706140)
chr7 (234-293)||(23823895-23823954)
chr7 (241-300)||(24969421-24969480)
chr7 (234-297)||(39420784-39420847)
chr7 (234-300)||(4973207-4973273)
chr7 (241-295)||(46414628-46414682)
chr7 (263-300)||(21190877-21190914)
chr7 (232-289)||(39474883-39474940)
chr7 (241-293)||(23658133-23658184)
[»] chr4 (43 HSPs)
chr4 (234-300)||(1446774-1446840)
chr4 (234-300)||(29895735-29895801)
chr4 (241-300)||(5472945-5473004)
chr4 (233-300)||(38165974-38166041)
chr4 (234-300)||(27248376-27248442)
chr4 (234-300)||(34667699-34667765)
chr4 (250-300)||(36145312-36145362)
chr4 (234-300)||(53599008-53599074)
chr4 (245-300)||(6032737-6032792)
chr4 (241-300)||(13552069-13552128)
chr4 (233-292)||(14567198-14567257)
chr4 (233-300)||(55920981-55921048)
chr4 (234-300)||(8888970-8889036)
chr4 (234-300)||(41339492-41339558)
chr4 (234-300)||(47078406-47078472)
chr4 (233-297)||(2559254-2559318)
chr4 (233-300)||(1940871-1940938)
chr4 (233-300)||(27531754-27531821)
chr4 (241-300)||(40272428-40272487)
chr4 (234-300)||(6779159-6779225)
chr4 (234-296)||(19651546-19651608)
chr4 (234-300)||(24166398-24166464)
chr4 (234-300)||(33647669-33647735)
chr4 (234-300)||(38075381-38075447)
chr4 (234-296)||(41162983-41163045)
chr4 (234-300)||(52950030-52950096)
chr4 (227-296)||(3574547-3574616)
chr4 (255-295)||(24850728-24850768)
chr4 (234-294)||(43458561-43458621)
chr4 (233-300)||(15732545-15732612)
chr4 (245-300)||(29588695-29588750)
chr4 (241-295)||(295634-295688)
chr4 (234-296)||(7000472-7000534)
chr4 (248-300)||(15840031-15840083)
chr4 (256-300)||(38168227-38168271)
chr4 (233-296)||(13073485-13073548)
chr4 (234-293)||(15829647-15829706)
chr4 (257-300)||(20128280-20128323)
chr4 (234-293)||(31588632-31588691)
chr4 (249-300)||(36262862-36262913)
chr4 (234-300)||(4736545-4736611)
chr4 (234-296)||(26480050-26480112)
chr4 (233-283)||(48317389-48317439)
[»] chr3 (50 HSPs)
chr3 (234-300)||(13893869-13893935)
chr3 (234-300)||(25294903-25294969)
chr3 (234-300)||(45877397-45877463)
chr3 (233-300)||(15320128-15320195)
chr3 (233-300)||(33251604-33251671)
chr3 (233-300)||(42412872-42412939)
chr3 (233-300)||(54261168-54261235)
chr3 (234-300)||(48341963-48342029)
chr3 (232-297)||(29135854-29135919)
chr3 (233-288)||(32873658-32873713)
chr3 (233-300)||(49543461-49543528)
chr3 (234-300)||(26207899-26207965)
chr3 (234-300)||(29127862-29127928)
chr3 (234-300)||(46529968-46530034)
chr3 (234-300)||(51683052-51683118)
chr3 (245-300)||(6462366-6462421)
chr3 (241-296)||(49082774-49082829)
chr3 (234-300)||(10040500-10040566)
chr3 (234-300)||(11687207-11687273)
chr3 (233-299)||(29762254-29762320)
chr3 (234-300)||(35315899-35315965)
chr3 (234-296)||(40944826-40944888)
chr3 (234-300)||(47749202-47749268)
chr3 (234-300)||(49198294-49198360)
chr3 (241-297)||(3136794-3136850)
chr3 (241-300)||(10043100-10043159)
chr3 (233-300)||(28242220-28242287)
chr3 (241-296)||(30735047-30735102)
chr3 (241-300)||(33560810-33560869)
chr3 (234-296)||(3755513-3755575)
chr3 (234-300)||(7310801-7310867)
chr3 (234-300)||(10855327-10855393)
chr3 (234-300)||(41630610-41630676)
chr3 (235-300)||(35923721-35923786)
chr3 (241-297)||(22405644-22405700)
chr3 (233-293)||(37092610-37092670)
chr3 (233-300)||(7328786-7328853)
chr3 (233-300)||(11025470-11025536)
chr3 (241-300)||(31072828-31072887)
chr3 (245-300)||(47303587-47303642)
chr3 (233-300)||(47471774-47471841)
chr3 (261-300)||(53649697-53649736)
chr3 (242-300)||(7613024-7613082)
chr3 (232-282)||(39849013-39849063)
chr3 (234-300)||(51060379-51060445)
chr3 (234-300)||(55069777-55069843)
chr3 (234-295)||(928543-928604)
chr3 (263-300)||(47219116-47219153)
chr3 (233-297)||(3762993-3763057)
chr3 (234-282)||(37320006-37320053)
[»] scaffold0002 (3 HSPs)
scaffold0002 (248-300)||(319382-319434)
scaffold0002 (234-300)||(516-582)
scaffold0002 (234-296)||(412127-412189)
[»] scaffold0005 (2 HSPs)
scaffold0005 (233-292)||(250118-250177)
scaffold0005 (234-300)||(271171-271237)
[»] scaffold0006 (1 HSPs)
scaffold0006 (233-300)||(68462-68529)
[»] scaffold0016 (1 HSPs)
scaffold0016 (234-284)||(8823-8873)
[»] scaffold0332 (1 HSPs)
scaffold0332 (241-300)||(15284-15343)
[»] scaffold0029 (1 HSPs)
scaffold0029 (234-300)||(40990-41056)
[»] scaffold0376 (1 HSPs)
scaffold0376 (233-300)||(12615-12682)
[»] scaffold0004 (1 HSPs)
scaffold0004 (245-300)||(95076-95131)
[»] scaffold0209 (1 HSPs)
scaffold0209 (234-300)||(12521-12587)
[»] scaffold0009 (1 HSPs)
scaffold0009 (234-300)||(9382-9448)
[»] scaffold0079 (1 HSPs)
scaffold0079 (264-300)||(8151-8187)
[»] scaffold0010 (1 HSPs)
scaffold0010 (234-294)||(25887-25947)


Alignment Details
Target: scaffold0011 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 19 - 234
Target Start/End: Original strand, 232008 - 232223
Alignment:
Q  19 atgtaatgaataggaagctaaaatgccactgttgcctcaggaacttaatctttggaataagattgattttaagaaaacttgctttaacggaatattagtg 118  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  232008 atgtaatgaataggaagctaaaatgccactgttgcctcaggaacttaatctttggaataagattgattttaagcaaacttgctttaacggaatattagtg 232107  T
Q  119 atgtcaacttcaaaaatttgttaataagacttttaaagttcaaatttgattaaactgacctttattctcaattcagtttgactaaactatgatgaaaatg 218  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  232108 gtgtcaacttcaaaaatttgttaataagacttttaaagttcaaatttgattaaactgacctttattctcaattcagtttgactaaactatgattaaaatg 232207  T
Q  219 aaattgaacaaaccaa 234  Q
    ||||||||||||||||    
T  232208 aaattgaacaaaccaa 232223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 55; Significance: 1e-22; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 14666234 - 14666168
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  14666234 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatccggggaataccgggtt 14666168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 2467282 - 2467215
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  2467282 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 2467215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 13085471 - 13085537
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||||||||||||||    
T  13085471 aaccaacttgtttgggctccagtggcgaggagctccttccaaggacgtatccggggaataccgggtt 13085537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 44893441 - 44893375
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  44893441 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 44893375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 1013140 - 1013074
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||  |||||||||||||||||||||||||||||||    
T  1013140 aaccaagttgcttgggctccagtggcaaggagctttttccaaggacgtatccggggaataccgggtt 1013074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 6100419 - 6100485
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||| | |||||||||||||| || ||||||||||||||||||||||||||||    
T  6100419 aaccaagttgtttgggcttcagtggcaaggagctcctttcaaggacgtatccggggaataccgggtt 6100485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8141049 - 8141115
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||  |||||||||||||| ||||||||||||||||    
T  8141049 aaccaagttgtttgggctccagtggcaaggagctgcttccaaggacgtattcggggaataccgggtt 8141115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 34846761 - 34846826
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  34846761 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgta-cccgggaataccgggtt 34846826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 38922577 - 38922511
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  38922577 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 38922511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 3418677 - 3418610
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||| |||||||||||||| ||||||||||||||| |||||||| ||||||    
T  3418677 aaaccaagttgtttggactcccgtggcaaggagctccttccaaggacgtatctggggaatatcgggtt 3418610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 45521116 - 45521182
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||||||| |||||||||||| ||| |||||||||||||||||    
T  45521116 aaccaagttgcttgggctccagtggcaaggagttcattccaaggatgtacccggggaataccgggtt 45521182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 10535566 - 10535506
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| |||||||| |||| |||||||||||||| ||||||||||||||||| |||||||    
T  10535566 aaccaagttgtttggactccagtggcaaggagctccttccaaggacgtatccgaggaatac 10535506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 6940504 - 6940571
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||| ||||||||||||||||||| ||||||||  |||| ||||||    
T  6940504 aaaccaagttgtttgggctccagtggtaaggagctcattccaaggaggtatccggaaaatatcgggtt 6940571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 9860159 - 9860092
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatcc-ggggaataccgggtt 300  Q
    |||||| ||||||||| ||| ||||||| |||||| |||||||||||||||| |||||||||||||||    
T  9860159 aaccaagttgtttgggatccagtggcaaagagctccttccaaggacgtatccgggggaataccgggtt 9860092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 15884719 - 15884652
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||| ||||||||| ||||||||||||| | |||||||||||||||    
T  15884719 aaaccaagttgattgggctccagtggtaaggagctccttccaaggacgtacctggggaataccgggtt 15884652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 24837188 - 24837251
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||| ||||| |||||||||||||    
T  24837188 aaaccaagttgcttgggctccagtggcaaggagctccttccaagtacgtacccggggaataccg 24837251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 33401955 - 33401896
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||| || ||||||||||  ||||||||||||||||    
T  33401955 ttgtttgggctccagtggcaaggagctcctttcaaggacgtactcggggaataccgggtt 33401896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 14846523 - 14846589
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||  ||||||| ||||| ||| ||||||||| |||||||||||||||||    
T  14846523 aaccaagttgtttgggctccactggcaagaagctccttctaaggacgtacccggggaataccgggtt 14846589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 22810027 - 22810093
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||| |||||||||||||||||| ||| | ||||||    
T  22810027 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtatccggagaacatcgggtt 22810093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 258 - 297
Target Start/End: Original strand, 11785887 - 11785926
Alignment:
Q  258 gcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  11785887 gcaaggagctcattccaaggacgtacccggggaataccgg 11785926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 17981399 - 17981454
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||||||| ||||||||| ||| ||||| |||||||||||    
T  17981399 ttgggctccagtggcaaggagctccttccaaggatgtacccgggaaataccgggtt 17981454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 284
Target Start/End: Complemental strand, 35496406 - 35496367
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatc 284  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  35496406 ttgggctccggtggcaaggagctcatttcaaggacgtatc 35496367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 10927553 - 10927619
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||| | |||||||||||||  || |||||||||| |||||||||||||||||    
T  10927553 aaccaagttgcttgggcttcagtggcaaggagcttctttcaaggacgtacccggggaataccgggtt 10927619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 280
Target Start/End: Original strand, 18091348 - 18091394
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacg 280  Q
    |||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  18091348 aaccaagttgtttgggctccagtggcaaggagcttattccaaggacg 18091394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 24938725 - 24938659
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||||||||||||  ||||||||| || |||| ||||||| ||||    
T  24938725 aaccaagttgtttgggctccagtggcaaggagctccctccaaggacatacccggagaataccaggtt 24938659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 34613941 - 34613875
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||   ||||||||||||||| ||||||    
T  34613941 aaccaaattgtttgggctccagtggcaatgagctccttccaaaaccgtatccggggaatatcgggtt 34613875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 43027252 - 43027318
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||||| ||||||||| |||| ||||||  ||||||||| |||||    
T  43027252 aaccaagttgtttgggctccagtggcaatgagctcatttcaagaacgtatttggggaatactgggtt 43027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 248 - 293
Target Start/End: Complemental strand, 7673803 - 7673758
Alignment:
Q  248 ggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| |||||||||||||| ||||||||||||||| ||||||||    
T  7673803 ggctccagtggcaaggagctccttccaaggacgtatctggggaata 7673758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 68254 - 68214
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgt 281  Q
    ||||||| |||||||||||||||||||| ||||||||||||    
T  68254 ttgtttgagctccggtggcaaggagctccttccaaggacgt 68214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 17845680 - 17845740
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||| |||  ||||||||||    
T  17845680 aaccaagttgtttgggctccagtggcaatgagctccttccaaggatgtactcggggaatac 17845740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 16893883 - 16893950
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||||||   |||||||||| ||| |||||| ||||||||||||||||| ||||||    
T  16893883 aaaccaagttgcttgggctatagtggcaaggaactccttccaatgacgtatccggggaatatcgggtt 16893950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 18373964 - 18374023
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||  |||||||||||||||||||| ||  |||||||| |||||| ||||    
T  18373964 ttgtttgggctccaatggcaaggagctcattccaaagatatatccgggaaataccaggtt 18374023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 583761 - 583827
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||  |||||||||||||  || | |||||||||||    
T  583761 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggtt 583827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 29933720 - 29933780
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| |||||||| |||| |||||||||||||| ||| ||| | |||||||| ||||||    
T  29933720 aaccaagttgtttggactccagtggcaaggagctccttctaagaatgtatccggagaatac 29933780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 30903282 - 30903346
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||| ||||||| ||||| || | ||||||||  |||||| ||||||| |||||||||||||    
T  30903282 aaaccaagttgtttgcgctccagtagtaaggagcttcttccaatgacgtattcggggaataccgg 30903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 34723786 - 34723726
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||||||| ||||||||||||| |||||| |||||| ||| ||| |||| |||||    
T  34723786 aaccaagttgtttgagctccggtggcaatgagctccttccaaagacatattcgggaaatac 34723726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 52; Significance: 8e-21; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 9179900 - 9179833
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| || ||||||||||||||    
T  9179900 aaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccagggaataccgggtt 9179833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 21898595 - 21898661
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  21898595 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 21898661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 2271465 - 2271398
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  2271465 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggtt 2271398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 8612138 - 8612071
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  8612138 aaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 8612071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 14107522 - 14107455
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  14107522 aaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtattcggggaataccgggtt 14107455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 13468880 - 13468946
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||    
T  13468880 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtatccggggaataccaggtt 13468946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 6606261 - 6606194
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||  | |||||||||||||| |||||||||||||||||||||||||||||||    
T  6606261 aaaccaagttgcttgggccacagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 6606194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 3030781 - 3030715
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||||||||||||||||||   ||||||| ||||||    
T  3030781 aaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtatttcgggaatatcgggtt 3030715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 5253386 - 5253320
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  5253386 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacccggggaataccgggtt 5253320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 21016914 - 21016848
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||| ||||||| |||||||||||||||||    
T  21016914 aaccaagttgcttgggctccagtggcaaggagctccttccagggacgtacccggggaataccgggtt 21016848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 10311634 - 10311566
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||  ||| ||||||||| || ||||||||||| ||||||| |||||||||||||||||||||||    
T  10311634 caaaccatgttgcttgggctccagtagcaaggagctccttccaagaacgtatccggggaataccgggtt 10311566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 9147255 - 9147314
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||| ||||||||||||||||||||||| | |||||||| ||||||    
T  9147255 ttgtttgggctccagtgggaaggagctcattccaaggacgtacctggggaatatcgggtt 9147314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 13036156 - 13036101
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||||||| |||||||||||||| ||||||||| ||||||    
T  13036156 ttgggctccagtggcaaggagctccttccaaggacgtattcggggaatatcgggtt 13036101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 284
Target Start/End: Complemental strand, 15643992 - 15643941
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatc 284  Q
    ||||||| ||| ||||||||| ||||||||||||||||||||||||||||||    
T  15643992 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtatc 15643941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 24672030 - 24671963
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| || |||||||||||| || ||||||||||||    
T  24672030 aaaccaagttgcttgggctccagtggcaaggagctcctttcaaggacgtatctggagaataccgggtt 24671963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 19089445 - 19089511
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| || |||||||||||||| |||||||||||||| |||||||| ||||    
T  19089445 aaccaagttgcttgggctccagtcgcaaggagctcatttcaaggacgtatccgaggaataccaggtt 19089511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 29333301 - 29333235
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  ||||||| |||||| ||||||||||||| || ||||||||||||||    
T  29333301 aaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacccagggaataccgggtt 29333235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 3588110 - 3588042
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| || ||||||||||||  ||||||||||| | ||||||| ||||||||||| ||||||||||||    
T  3588110 caaactaagttgtttgggctcaagtggcaaggagtttattccaaagacgtatccggagaataccgggtt 3588042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 8938658 - 8938718
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||||||||||||| ||| |||||||||| |||||| ||| ||||||||||||||    
T  8938658 aaccaagttgtttgggctccagtgacaaggagctccttccaaagacatatccggggaatac 8938718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 19230720 - 19230672
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||    
T  19230720 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgta 19230672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 5759574 - 5759641
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||| ||| ||||||||||||| ||| |||||| ||||||    
T  5759574 aaaccaagttgcttgggctccagtggcaaggaactccttccaaggacgtacccgaggaatatcgggtt 5759641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8932608 - 8932674
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||  |||| ||||||||||| || ||||||||| |||||||||||||| ||||||    
T  8932608 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggtt 8932674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8944074 - 8944140
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||  |||| ||||||||||| || ||||||||| |||||||||||||| ||||||    
T  8944074 aaccaagttgtttgaactccagtggcaaggagttccttccaaggatgtatccggggaatatcgggtt 8944140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 233 - 295
Target Start/End: Original strand, 12606376 - 12606438
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    ||||||| ||| |||||||| | |||||| |||||| ||||||| ||||||||||||||||||    
T  12606376 aaaccaaattgcttgggctctgctggcaatgagctccttccaagaacgtatccggggaatacc 12606438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 30788993 - 30788948
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||| ||||||||| |||||||||||||| ||||||    
T  30788993 gtggcaaggagctccttccaaggatgtatccggggaatatcgggtt 30788948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 239 - 300
Target Start/End: Complemental strand, 34954776 - 34954716
Alignment:
Q  239 atttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||||  ||||||||||||| ||||||||||||| | |||||||||| ||||    
T  34954776 atttgtttgggctcca-tggcaaggagctccttccaaggacgtacctggggaataccaggtt 34954716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 252 - 300
Target Start/End: Original strand, 12635779 - 12635827
Alignment:
Q  252 ccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||  |||| |||||||||||||||||||||||||| ||||    
T  12635779 ccggtggcaagatgctccttccaaggacgtatccggggaataccaggtt 12635827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 29444917 - 29444862
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||  |||||||||||||| |||||| |||||| |||||| ||||||||||    
T  29444917 ttgggctctagtggcaaggagctccttccaaagacgtacccgggggataccgggtt 29444862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 17115060 - 17115012
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||| ||| ||||||||| |||||||| ||||| |||||||||||||    
T  17115060 aaccaaattgcttgggctccagtggcaagaagctccttccaaggacgta 17115012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 30349522 - 30349589
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||    
T  30349522 aaaccaagttgtttgggctccagtggcaaggagttccttccaaggacgtatccggggaataccgggtt 30349589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 42861382 - 42861315
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  42861382 aaaccaaattgtttgggctccagtggcaaggagctcattccaaggacatatccggggaatatcgggtt 42861315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 19572668 - 19572734
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  19572668 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 19572734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 5732085 - 5732017
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  5732085 caaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 5732017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 41163624 - 41163556
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||||||||    
T  41163624 caaaccaagttgtttgggctccagtggcaaggagctccttccaagaacgtacccggggaataccgggtt 41163556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 9812815 - 9812882
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  9812815 aaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 9812882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 12704957 - 12705024
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  12704957 aaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 12705024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 1538375 - 1538441
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| |||| ||||||||| ||||||||||||||||    
T  1538375 aaccaagttgtttgggctccagtggcaaggagctccttccgaggacgtattcggggaataccgggtt 1538441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 6767214 - 6767148
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  6767214 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 6767148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 18136443 - 18136377
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| |||||| ||||||||||| ||||||||||||    
T  18136443 aaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtatccggagaataccgggtt 18136377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 42086271 - 42086337
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||    
T  42086271 aaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtacccgaggaataccgggtt 42086337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 234 - 298
Target Start/End: Original strand, 20255313 - 20255377
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccggg 298  Q
    |||||| |||||||||||| ||||||||||||||||||| |||||||||  ||||||||||||||    
T  20255313 aaccaagttgtttgggctctggtggcaaggagctcattctaaggacgtactcggggaataccggg 20255377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 12766074 - 12766141
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  12766074 aaaccaagttgtttggactcgagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 12766141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 28857071 - 28857138
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||    
T  28857071 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggtt 28857138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 35813154 - 35813095
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||||    
T  35813154 ttgtttgggctgcggtggcaagaagctcattccaaggacgtacccgaggaataccgggtt 35813095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 39728330 - 39728397
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||| ||||| |||||||||||| ||||    
T  39728330 aaaccaagttgtttgggctccagtggcaaggagctctttccaagaacgtacccggggaataccaggtt 39728397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 28856921 - 28856987
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||    
T  28856921 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggtt 28856987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 35403675 - 35403609
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||  |||| |||||||||||    
T  35403675 aaccaacttgtttgggctccagtggcaaggagctccttccaaggacgtactcgggaaataccgggtt 35403609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 233 - 298
Target Start/End: Original strand, 5079274 - 5079339
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccggg 298  Q
    ||||||| ||||||||| ||||||||||| |||||| ||||||| ||||||||| |||||||||||    
T  5079274 aaaccaagttgtttgggttccggtggcaaagagctccttccaagcacgtatccgtggaataccggg 5079339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 2485139 - 2485207
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| |||||||| ||||  |||||||||||||||||||||||||||| | |||||||| |||||    
T  2485139 caaaccaagttgtttggactccaatggcaaggagctcattccaaggacgtattcagggaatactgggtt 2485207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 20525780 - 20525848
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||| ||||||||| |||||||||||||| || |||||| |||||||||||||| ||||||    
T  20525780 caaaccaagttgcttgggctccagtggcaaggagctcctttcaaggatgtatccggggaatatcgggtt 20525848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 25417336 - 25417280
Alignment:
Q  244 tttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  25417336 tttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggtt 25417280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 26077085 - 26077145
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||||||||||||| |||| ||||||||||||||||||||||||  |||||||||    
T  26077085 aaccaagttgtttgggctccagtggtaaggagctcattccaaggacgtatttggggaatac 26077145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 3654076 - 3654009
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||| ||| |||||| ||||||||||||| |||| ||||||||||||    
T  3654076 aaaccaagttgtttgggctccagtgacaatgagctctttccaaggacgtacccggagaataccgggtt 3654009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 7866524 - 7866591
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||| |||| |||||||||||||| ||||||||||||| ||| |||||||||||||    
T  7866524 aaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccgaggaataccgggtt 7866591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 242 - 300
Target Start/End: Original strand, 1898953 - 1899011
Alignment:
Q  242 tgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||| | |||||||||||||| ||||||||| ||| |||||||||||||||||    
T  1898953 tgtttgggctacagtggcaaggagctccttccaaggatgtacccggggaataccgggtt 1899011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8513463 - 8513529
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||| |||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  8513463 aaccaagttgcttggactcaagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 8513529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Original strand, 23383592 - 23383642
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatc 284  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  23383592 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtatc 23383642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 14974485 - 14974421
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||  ||||||||||||||||| |||||||||||||| ||||| ||||||    
T  14974485 aaccaagttgcttgggctcc--tggcaaggagctcattctaaggacgtatccggagaatatcgggtt 14974421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 16755016 - 16755071
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| | |||||||||||||| |||||| |||||||||||||||||| |||||    
T  16755016 ttgggcttcagtggcaaggagctctttccaaagacgtatccggggaatactgggtt 16755071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 20692884 - 20692943
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||  ||||||| |||||  ||||||||||||| |||||||||||||||||    
T  20692884 ttgtttgggctctagtggcaaagagcttcttccaaggacgtacccggggaataccgggtt 20692943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 37263185 - 37263251
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||||||| || ||| ||||||||| |||||||||| ||||||    
T  37263185 aaccaagttgcttgggctccagtggcaaggagttccttctaaggacgtacccggggaatatcgggtt 37263251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 4016418 - 4016370
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||| |||| |||||||| |||||||| |||||||||||||||||||    
T  4016418 aaccaagttgtatgggctccagtggcaagaagctcattccaaggacgta 4016370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 277
Target Start/End: Original strand, 14728025 - 14728069
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaagg 277  Q
    ||||||| ||||||||||||| ||||||| |||||||||||||||    
T  14728025 aaaccaagttgtttgggctccagtggcaatgagctcattccaagg 14728069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 38297129 - 38297061
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||||||||||||| |||||||||||||| ||| ||||| |||   | |||||||||||||    
T  38297129 caaaccaaattgtttgggctccagtggcaaggagctccttctaaggatgtacttgaggaataccgggtt 38297061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 7308520 - 7308461
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| ||  |||||||||||||||||||||||||||||  | |||||| ||||||    
T  7308520 ttgtttgggttctagtggcaaggagctcattccaaggacgtatttgaggaatatcgggtt 7308461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 14152001 - 14152060
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||| |||||||||||||| |||||| || ||| | |||||||||||||||    
T  14152001 ttgtttcggctccagtggcaaggagctccttccaatgatgtacctggggaataccgggtt 14152060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 23247507 - 23247448
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| || | || ||||||||||||||||||||||||| | |||||||| ||||||    
T  23247507 ttgtttggacttcagtagcaaggagctcattccaaggacgtacctggggaatatcgggtt 23247448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 24498934 - 24498993
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||  || ||||||||||| ||||||||||||||| || ||||| ||||||    
T  24498934 ttgtttgggctctagtagcaaggagctccttccaaggacgtatctggagaatatcgggtt 24498993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 35561981 - 35561922
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||| |||| |||| ||||||| |||||| |||||| |||||||||||||||||    
T  35561981 aaccaagttgcttggactccagtggcaaagagctccttccaatgacgtatccggggaata 35561922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 280
Target Start/End: Complemental strand, 42292179 - 42292140
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacg 280  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  42292179 ttgtttgggctccagtggcaaggagctcattccaaagacg 42292140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 9168414 - 9168353
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| ||| ||||| |||||||||| ||| |||||| ||||||||||||||||||||    
T  9168414 aaccaagttgcttgagctccagtggcaagga-ctccttccaaagacgtatccggggaataccg 9168353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 297
Target Start/End: Original strand, 13664225 - 13664267
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||||||||||| |||||||||||||||  |||||||||||    
T  13664225 gtggcaaggagctccttccaaggacgtatctagggaataccgg 13664267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 24500142 - 24500092
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||||| ||||||||||| | ||| |||||||||||||| |||||||||    
T  24500142 caaaccaagttgtttgggcttcagtgacaaggagctcattctaaggacgta 24500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 20223021 - 20223066
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||| |||||| |||||||| |||||||| ||||||    
T  20223021 gtggcaaggagctccttccaaagacgtatctggggaatatcgggtt 20223066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 38897860 - 38897815
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||| || |||||||||||  |||||||||||||||    
T  38897860 gtggcaaggagctctttacaaggacgtatatggggaataccgggtt 38897815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 18327724 - 18327780
Alignment:
Q  244 tttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| |||| |||||||||||||| |||||||||||||| | || ||||| |||||    
T  18327724 tttggactccagtggcaaggagctccttccaaggacgtattcaggaaatactgggtt 18327780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 25950738 - 25950686
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    ||||||||||||| |||| ||||||||| ||| |||||||||  |||||||||    
T  25950738 ttgtttgggctccagtggtaaggagctccttcaaaggacgtactcggggaata 25950686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 249 - 293
Target Start/End: Original strand, 28862784 - 28862828
Alignment:
Q  249 gctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    ||||| |||||||||||||| |||||| ||||||| |||||||||    
T  28862784 gctccagtggcaaggagctccttccaaagacgtattcggggaata 28862828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 8e-21; HSPs: 46)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 3644051 - 3643984
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||| |||||||||||||||||||||||||||||||||||||||||    
T  3644051 aaaccaagttgcttgggctccagtggaaaggagctcattccaaggacgtatccggggaataccgggtt 3643984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 7747217 - 7747283
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  7747217 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 7747283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 19976970 - 19976904
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||    
T  19976970 aaccaaattgtttgggctccagtggcaagtagctctttccaaggacgtatccggggaataccgggtt 19976904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 21286394 - 21286453
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  21286394 ttgtttgagctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 21286453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 34356149 - 34356215
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||||| |||||||||||||||    
T  34356149 aaccaagttgtttgggctccagtggcaaggagctatttccaaggacgtatctggggaataccgggtt 34356215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 38005345 - 38005411
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||| ||||||||||| |||||    
T  38005345 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccggggaatactgggtt 38005411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 38962706 - 38962772
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||| |||| |||| |||||||||||| ||||||||||||||||||||||||||||    
T  38962706 aaccaagttgtttggactccagtggtaaggagctcatttcaaggacgtatccggggaataccgggtt 38962772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 331444 - 331510
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||| |||||| ||||||||||||| |||||||||||||||||    
T  331444 aaccaagttgcttgggctccagtggcaatgagctctttccaaggacgtacccggggaataccgggtt 331510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 2550811 - 2550877
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| || ||||||||||||||||||||| ||||||    
T  2550811 aaccaagttgcttgggctccagtggcaaggagctccttacaaggacgtatccggggaatatcgggtt 2550877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 6358307 - 6358253
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||||||||||||||    
T  6358307 ttgtttgggctccagtggcaagaagctcattcaaaggacgtatccggggaatacc 6358253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 18902693 - 18902627
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||  ||||||||||||||||    
T  18902693 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtactcggggaataccgggtt 18902627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 23500844 - 23500779
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||||||||||||||||| |||||| ||||||| ||||||||| ||||||    
T  23500844 aaccaagttgtttgggctccggtggcaaggagctccttccaaagacgtat-cggggaatatcgggtt 23500779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 235 - 296
Target Start/End: Original strand, 41187793 - 41187854
Alignment:
Q  235 accaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||| |||| |||||| |||||||||||||||| ||||||||||||||||| |||||||||    
T  41187793 accaagttgtctgggcttcggtggcaaggagctccttccaaggacgtatccgaggaataccg 41187854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 12864167 - 12864230
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||| ||||||||||||| ||| |||||||||| |||||| ||||||| |||||||||||||    
T  12864167 aaccaagttgtttgggctccagtgacaaggagctccttccaatgacgtattcggggaataccgg 12864230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 21180477 - 21180414
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||| |||  |||||||||    
T  21180477 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacccgaagaataccgg 21180414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 29422157 - 29422224
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| || ||||||||||| || |||||||||| ||||||||||| |||||    
T  29422157 aaaccaagttgtttgggctccagtagcaaggagctcctttcaaggacgtacccggggaatactgggtt 29422224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 33005694 - 33005761
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| ||||||||||||||||| | |||||||| ||| |||||||||||||    
T  33005694 aaaccaaattgcttgggctccagtggcaaggagctcatttctaggacgtacccgtggaataccgggtt 33005761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8410074 - 8410140
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||| ||||| ||||||    
T  8410074 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggagaatatcgggtt 8410140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 10046639 - 10046573
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||  ||||||||||||| ||||||| |||||||||| ||||||||||||    
T  10046639 aaccaagttgcttgggctccaatggcaaggagctccttccaagaacgtatccggagaataccgggtt 10046573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 11069821 - 11069887
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||| ||||||  |||| |||||||||||||||||||||| |||||||||||| ||||    
T  11069821 aaccaagttgttttggctccaatggctaggagctcattccaaggacgtacccggggaataccaggtt 11069887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 14169772 - 14169706
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||| ||||||| || |||||||||||||| ||||||||| ||||||    
T  14169772 aaccaagttgtttgggctccagtgacaaggagatctttccaaggacgtattcggggaatatcgggtt 14169706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 15079426 - 15079492
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||||||||||||| | | ||||||||||||| ||||||||||| |||||    
T  15079426 aaccaagttgcttgggctccggtggcaaggaacaccttccaaggacgtacccggggaatacagggtt 15079492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 20612699 - 20612633
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||  |||| ||||||||||||||||    
T  20612699 aaccaagttgcttgggctccagtggcaaggagctccttccaaggttgtattcggggaataccgggtt 20612633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 25540551 - 25540501
Alignment:
Q  250 ctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| |||||||||||||||||||||||||||||| ||||||||| |||||    
T  25540551 ctccagtggcaaggagctcattccaaggacgtatctggggaatactgggtt 25540501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 42770814 - 42770748
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||| |||||| ||||||||||||||||| | |||||||||||    
T  42770814 aaccaagttgcttgggctccagtggcaaagagctccttccaaggacgtatccgagaaataccgggtt 42770748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 234 - 295
Target Start/End: Complemental strand, 14853530 - 14853469
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    |||||| ||||||||||||| |||||||||| ||| || |||||| ||||||||||||||||    
T  14853530 aaccaagttgtttgggctccagtggcaaggaactcctttcaaggatgtatccggggaatacc 14853469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 294
Target Start/End: Complemental strand, 20963265 - 20963212
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    ||||||||||||| |||||||||| ||| |||||| ||||||||||||||||||    
T  20963265 ttgtttgggctccagtggcaaggacctccttccaatgacgtatccggggaatac 20963212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 41220599 - 41220644
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||    
T  41220599 gtggcaaggagctccttccaaggacgtacccggggaataccgggtt 41220644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 2528506 - 2528438
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||||||||||||| ||||||| |||||| |||||||||||||  || |||| ||||||||    
T  2528506 caaaccaaattgtttgggctccagtggcaatgagctccttccaaggacgtactcgaggaacaccgggtt 2528438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 22593078 - 22593138
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||| ||| ||||| |||||||||||||| ||||||||||||| |||||||||||    
T  22593078 aaccaagttgcttgtgctccagtggcaaggagctccttccaaggacgtacccggggaatac 22593138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 296
Target Start/End: Original strand, 35946693 - 35946744
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||| | |||| ||||||||||||| |||||||||||||||||||||||    
T  35946693 ttgggcttccgtggtaaggagctcattctaaggacgtatccggggaataccg 35946744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 39807041 - 39806982
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| ||||||||  |||| || |||||||||| |||||||||||||||||    
T  39807041 ttgtttgggctccagtggcaagatgctccttacaaggacgtacccggggaataccgggtt 39806982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 9360911 - 9360845
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||| | | |||||||| ||||||||||||||||| |||||||||||| ||||    
T  9360911 aaccaaattgcttgggcttcaggggcaaggatctcattccaaggacgtacccggggaataccaggtt 9360845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 41032068 - 41032003
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||||| || ||||| ||||||||    
T  41032068 aaccaaattgcttgggctccagtggcaaggagctccttccaaggacgta-ccagggaacaccgggtt 41032003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 260 - 300
Target Start/End: Original strand, 10823029 - 10823069
Alignment:
Q  260 aaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| ||||||||||||| |||||||||||||||||    
T  10823029 aaggagctccttccaaggacgtacccggggaataccgggtt 10823069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 25549681 - 25549737
Alignment:
Q  244 tttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||| |||||||||||||| ||||||| ||||||  ||||||||| |||||    
T  25549681 tttgggctccagtggcaaggagctccttccaagtacgtatttggggaatactgggtt 25549737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 2149358 - 2149295
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||| ||||||||||||| |||||||||| ||  || |||||| ||||| ||||||||||||    
T  2149358 aaccaagttgtttgggctccagtggcaaggaacttctttcaaggatgtatctggggaataccgg 2149295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 7787010 - 7787065
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||| ||| || | |||||||| |||||||||||||||||    
T  7787010 ttgggctccagtggcaaggaactcctttctaggacgtacccggggaataccgggtt 7787065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 13026575 - 13026508
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||  |||| |||||||||| ||| |||||||||||||||| ||||||| ||||||    
T  13026575 aaaccaagttgattgaactccagtggcaaggaactccttccaaggacgtatccagggaatatcgggtt 13026508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 34722629 - 34722672
Alignment:
Q  239 atttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    ||||||||||||||| ||| |||||||||| |||||||||||||    
T  34722629 atttgtttgggctccagtgacaaggagctccttccaaggacgta 34722672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 37560123 - 37560182
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||| ||| ||||| ||||||||||||| ||| |||||||| ||||    
T  37560123 ttgtttgggctccagtggtaagaagctccttccaaggacgtacccgaggaataccaggtt 37560182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 45263823 - 45263764
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||| || |||  |  ||||||||||||||||||||    
T  45263823 ttgtttgggctccagtggcaaggagctcctttcaaaaatttatccggggaataccgggtt 45263764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 10026779 - 10026713
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||||  ||||||||||||| |||||||||||||  |||  |||||||||||    
T  10026779 aaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtactcggaaaataccgggtt 10026713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 44945537 - 44945603
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||  |||||||||||||| |||||||||||||  ||| |||||| |||||    
T  44945537 aaccaagttgcttgggctcaagtggcaaggagctccttccaaggacgtactcggagaatactgggtt 44945603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 255 - 300
Target Start/End: Original strand, 16034901 - 16034946
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| ||||| ||| ||||||||||||||||| |||||||||||||    
T  16034901 gtggtaaggaactccttccaaggacgtatccgaggaataccgggtt 16034946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 259 - 300
Target Start/End: Complemental strand, 34346425 - 34346384
Alignment:
Q  259 caaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||||||||||||| | ||||||||| |||||    
T  34346425 caaggagctcattccaaggacgtacctggggaatactgggtt 34346384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 52; Significance: 8e-21; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 41743216 - 41743283
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||||    
T  41743216 aaaccaagttgcttgggctccggtggcaaggagctccttccaaggacgtatccgaggaataccgggtt 41743283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 5855466 - 5855532
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||| ||||||||||||||||    
T  5855466 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtattcggggaataccgggtt 5855532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 41664019 - 41663954
Alignment:
Q  235 accaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| ||||||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  41664019 accaagttgtttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggtt 41663954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 49078057 - 49078124
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| ||| |||||||||||||||||||||||||||    
T  49078057 aaaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtatccggggaataccgggtt 49078124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 255 - 300
Target Start/End: Complemental strand, 34334438 - 34334393
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  34334438 gtggcaaggagctcattccaaggacgtatccggggaataccgggtt 34334393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 8763933 - 8764001
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  8763933 caaaccaagttgcttgggctcccgtggcaaggagctccttccaaggacgtacccggggaatatcgggtt 8764001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 229 - 300
Target Start/End: Complemental strand, 11398057 - 11397986
Alignment:
Q  229 aaccaaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| |||||| ||| ||||||||| |||||||||||||| ||||||||| |||||||| ||||||||||||    
T  11398057 aacccaaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtatccggagaataccgggtt 11397986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 10422732 - 10422798
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||| | |||||||||||||| |||||| ||||||| ||||||||||||||||    
T  10422732 aaccaagttgtttgggctacagtggcaaggagctccttccaatgacgtattcggggaataccgggtt 10422798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 18915811 - 18915877
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||| | |||||||||||||  ||||||||||||| |||||||||||||||||    
T  18915811 aaccaagttgtttgggcttcagtggcaaggagcttcttccaaggacgtacccggggaataccgggtt 18915877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 40288641 - 40288575
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||  |||||||||||||| |||||||||||||| ||||||||||||||||    
T  40288641 aaccaagttgcttgggctcgagtggcaaggagctctttccaaggacgtattcggggaataccgggtt 40288575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 48798234 - 48798168
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||| ||||||| |||||||||||||| |||||| ||||||||||||||||| ||||||    
T  48798234 aaccaagttgttggggctccagtggcaaggagctccttccaatgacgtatccggggaatatcgggtt 48798168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 232 - 297
Target Start/End: Complemental strand, 33418281 - 33418216
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||||| ||||||||||||| |||||||||||||| |||||| |||||| |||| |||||||||    
T  33418281 caaaccaagttgtttgggctccagtggcaaggagctccttccaaagacgtacccggagaataccgg 33418216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 10173128 - 10173072
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||||||||| ||||||||| |||| ||||||||||||||| ||||||||||||    
T  10173128 ttgtttgggctccagtggcaaggtgctccttccaaggacgtatctggggaataccgg 10173072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 31152658 - 31152726
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||||||||||||  |||||||||||||| ||||||||| ||| || ||||||||||||||    
T  31152658 caaaccaagttgtttgggctctagtggcaaggagctctttccaaggatgtacccagggaataccgggtt 31152726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 892454 - 892395
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||| | |||||||||||||| || ||||||||||| ||||||||||||||||    
T  892454 ttgtttgggcttcagtggcaaggagctcctttcaaggacgtattcggggaataccgggtt 892395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 34877933 - 34878000
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||| | |||||||||||| | |||||||||||||| ||||||||||| ||||    
T  34877933 aaaccaagttgtttgggcttcagtggcaaggagcaccttccaaggacgtattcggggaataccaggtt 34878000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 47313055 - 47312996
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| ||||||| ||| || ||||||||||||||| |||||||||||||||    
T  47313055 ttgtttgggctccagtggcaacgagatccttccaaggacgtatctggggaataccgggtt 47312996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 2981095 - 2981029
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||  |||||||||||||| ||||| ||||||||||||||||||| |||||    
T  2981095 aaccaagttgcttgggctctagtggcaaggagctccttccagggacgtatccggggaatactgggtt 2981029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 232 - 282
Target Start/End: Complemental strand, 12036910 - 12036860
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||||| |||||||||||||||||||||| ||||| |||||||||||||    
T  12036910 caaaccaagttgtttgggctccggtggcaagaagctccttccaaggacgta 12036860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 17358635 - 17358569
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||||||  |  ||||||||||||||||| |||||||||||  |||||||||||||||    
T  17358635 aaccaatttgtttgggagctagtggcaaggagctcatttcaaggacgtatttggggaataccgggtt 17358569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 31576711 - 31576645
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||||||| |||||||||||| |  |||||||||||    
T  31576711 aaccaagttgtttgggctctagtggcaaggagctcattctaaggacgtatcccgaaaataccgggtt 31576645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 1764346 - 1764290
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||||||| | |||||||||||||| ||||||||||||| ||||| ||||||||    
T  1764346 ttgtttgggcttctgtggcaaggagctccttccaaggacgtacccgggaaataccgg 1764290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 9659328 - 9659276
Alignment:
Q  248 ggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||||||| |||||||||  ||||||||||||||||    
T  9659328 ggctccagtggcaaggagctcattctaaggacgtactcggggaataccgggtt 9659276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 45362036 - 45361980
Alignment:
Q  244 tttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| | |||||||||||||| ||||||||||||| || ||||||||||||||    
T  45362036 tttgggcttcagtggcaaggagctccttccaaggacgtaccctgggaataccgggtt 45361980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 2567227 - 2567286
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||| |  ||||||||||||| |||||||||||||| ||| ||||||||||||    
T  2567227 ttgtttgggcttcactggcaaggagctccttccaaggacgtattcggagaataccgggtt 2567286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 26325755 - 26325822
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| | ||||||| |||||||||||||| || |||||||||||||| |||||| ||||||    
T  26325755 aaaccaagttgctagggctccagtggcaaggagctcctttcaaggacgtatccgaggaatatcgggtt 26325822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 299
Target Start/End: Original strand, 32822 - 32880
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggt 299  Q
    ||||||||||||| ||||||| |||||| ||||||||||||| | |||||||| |||||    
T  32822 ttgtttgggctccagtggcaatgagctccttccaaggacgtaccgggggaatatcgggt 32880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 234 - 299
Target Start/End: Complemental strand, 8905314 - 8905249
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggt 299  Q
    |||||| |||||||| |||  |||||||||||||| |||||| ||||||||||| ||||| |||||    
T  8905314 aaccaagttgtttggactctagtggcaaggagctccttccaatgacgtatccggagaatatcgggt 8905249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 300
Target Start/End: Original strand, 42744732 - 42744797
Alignment:
Q  235 accaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| ||| |||| |||| ||||||| |||||| ||||||||||||| || ||||||||||||||    
T  42744732 accaagttgcttggactccagtggcaatgagctccttccaaggacgtacccagggaataccgggtt 42744797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 293
Target Start/End: Complemental strand, 5064000 - 5063948
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||||| ||||||||| ||||| ||||||||||||||| ||||||||    
T  5064000 ttgtttaggctctggtggcaagaagctccttccaaggacgtatctggggaata 5063948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 15238272 - 15238204
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||| |||||||||  ||||||||||||| ||||||||||||| |  ||||||| ||||||    
T  15238272 caaaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtacctagggaatatcgggtt 15238204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 296
Target Start/End: Original strand, 16956432 - 16956472
Alignment:
Q  256 tggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||||||||| ||||||||||||| |||||||||||||    
T  16956432 tggcaaggagctccttccaaggacgtacccggggaataccg 16956472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 281
Target Start/End: Complemental strand, 32151079 - 32151039
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgt 281  Q
    ||||||||||||| |||||||||||||| ||||||||||||    
T  32151079 ttgtttgggctccagtggcaaggagctccttccaaggacgt 32151039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 5503975 - 5504034
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||||||||| ||| |||||||||||||| |||| || ||||||| ||||||||    
T  5503975 aaccaagttgtttgggttccagtggcaaggagctccttccgagaacgtatctggggaata 5504034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 9853430 - 9853375
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||||||| ||||||||| ||| ||||  |||||||||||    
T  9853430 ttgggctccagtggcaaggagctccttccaaggatgtacccggaaaataccgggtt 9853375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 296
Target Start/End: Complemental strand, 14254409 - 14254370
Alignment:
Q  257 ggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||||| |||||||||||||||||| ||||||||||||    
T  14254409 ggcaaggaactcattccaaggacgtattcggggaataccg 14254370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 15465908 - 15465975
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||| ||| | |||| ||||||||||||||  |||||||||| ||||    
T  15465908 aaaccaagttgtttgggctccagtgacaaagggctccttccaaggacgtatttggggaataccaggtt 15465975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 17642169 - 17642102
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||| |||||||||| ||||| ||||||| || || ||||| |||||    
T  17642169 aaaccaagttgtttgggctccagtgacaaggagctccttccacggacgtacccaggaaatactgggtt 17642102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Complemental strand, 33004179 - 33004120
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||| ||||||||| |||   |||||||| ||||||||||||||||||||||||    
T  33004179 aaccaagttgcttgggctccagtgatgaggagctccttccaaggacgtatccggggaata 33004120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 50503526 - 50503459
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||| ||| |||  ||||| |||||||| || ||||||||||||||||||||| ||||||    
T  50503526 aaaccaagttgtatggactctagtggcgaggagctcctttcaaggacgtatccggggaatatcgggtt 50503459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 10336472 - 10336526
Alignment:
Q  246 tgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| ||| |||||||||||||| |||||| ||||||||||| ||||| ||||||    
T  10336472 tgggttccagtggcaaggagctccttccaaagacgtatccggagaatatcgggtt 10336526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 51437413 - 51437479
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||| | ||| ||| |||||| || |||||||||||||| |||||| ||||||    
T  51437413 aaccaagttgtttgggcttcagtgacaatgagctcctttcaaggacgtatccgaggaatatcgggtt 51437479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 231 - 300
Target Start/End: Original strand, 34697276 - 34697345
Alignment:
Q  231 ccaaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| ||| |||| ||  ||||||||||||||| ||||||  |||||| ||||||||||| ||||    
T  34697276 ccaaaccaagttgcttggactttggtggcaaggagctccttccaaaaacgtattcggggaataccaggtt 34697345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 25165345 - 25165408
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||| ||| ||||||||  |||||||||||||| |||||| |||||| | ||||||||||||    
T  25165345 aaaccaagttgcttgggctctagtggcaaggagctccttccaa-gacgtacctggggaataccgg 25165408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 244 - 300
Target Start/End: Complemental strand, 30927881 - 30927825
Alignment:
Q  244 tttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| |||| |||||||||||||| ||||||||||||| | ||| |||| ||||||    
T  30927881 tttggactccagtggcaaggagctccttccaaggacgtacctgggaaatatcgggtt 30927825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 34719742 - 34719786
Alignment:
Q  256 tggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| ||||||||||||| | ||||||||| |||||    
T  34719742 tggcaaggagctccttccaaggacgtacctggggaatactgggtt 34719786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 51; Significance: 3e-20; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 48804629 - 48804695
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  48804629 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 48804695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 22268193 - 22268126
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| ||||||||||||||||||||||||||||   |||||||||||||||    
T  22268193 aaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacttggggaataccgggtt 22268126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 43925458 - 43925524
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  43925458 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 43925524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 47341822 - 47341884
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  47341822 aaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaataccg 47341884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 232 - 300
Target Start/End: Complemental strand, 4228916 - 4228848
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| ||||||||||||| | |||||||||||| ||||||||||||||||| |||||||| ||||    
T  4228916 caaaccaagttgtttgggctccagcggcaaggagctccttccaaggacgtatccgaggaataccaggtt 4228848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 1797417 - 1797472
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||||||| ||||||||||||||||| |||||||||||||    
T  1797417 ttgggctccagtggcaaggagctccttccaaggacgtatccgaggaataccgggtt 1797472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 9685692 - 9685751
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  9685692 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggtt 9685751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 13095803 - 13095870
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| || |||||||||| |||||||||||||||||    
T  13095803 aaaccaagttgcttgggctcccgtggcaaggagctcctttcaaggacgtacccggggaataccgggtt 13095870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 4195365 - 4195303
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| ||||||||| |||||||||||||| | |||||||||||||||||||||||||    
T  4195365 aaccaagttgcttgggctccagtggcaaggagctcctgccaaggacgtatccggggaataccg 4195303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 10048023 - 10047973
Alignment:
Q  250 ctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  10048023 ctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 10047973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 43346942 - 43346876
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||| |||| |||||||||||||| |||||| |||||||| |||||||||||||||    
T  43346942 aaccaagttgtttggactccagtggcaaggagctccttccaaagacgtatctggggaataccgggtt 43346876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 236 - 300
Target Start/End: Original strand, 34659174 - 34659238
Alignment:
Q  236 ccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||| ||||||||||||| |||||||||||||| ||||| ||| ||| |||||||||||||||||    
T  34659174 ccaagttgtttgggctccagtggcaaggagctccttccagggatgtacccggggaataccgggtt 34659238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 22993531 - 22993464
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||| |||| |||||||||||||| ||||||||||||| |||||||||| ||||||    
T  22993531 aaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccggggaatatcgggtt 22993464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 27028224 - 27028291
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| ||||||||||||||||||||||||||| ||||| | ||| |||||| ||||    
T  27028224 aaaccaagttgtttggactccggtggcaaggagctcattccaagaacgtacctgggaaataccaggtt 27028291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 34127784 - 34127717
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||||||||  ||||||||| ||| ||||||||||||| |||||||||||||||||    
T  34127784 aaaccaagttgcttgggctccaatggcaaggaactccttccaaggacgtacccggggaataccgggtt 34127717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 43862136 - 43862069
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||  | |||||||||||| |||||| |||||||| |||||||||||||||    
T  43862136 aaaccaagttgtttgggctctagcggcaaggagctctttccaaagacgtatctggggaataccgggtt 43862069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 17748545 - 17748479
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||| ||||  |||||||||||||| ||||||||||||||||    
T  17748545 aaccaagttgtttgggctctagtggcaagcagcttcttccaaggacgtattcggggaataccgggtt 17748479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 246 - 300
Target Start/End: Original strand, 18785627 - 18785681
Alignment:
Q  246 tgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| |||||||| ||||| ||||||||||||| |||||||||||||||||    
T  18785627 tgggctccagtggcaagaagctccttccaaggacgtacccggggaataccgggtt 18785681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 296
Target Start/End: Complemental strand, 5039582 - 5039519
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||| ||||||||||||| |||||||||||||| |||||  || |||| ||||||||||||    
T  5039582 aaaccaagttgtttgggctccagtggcaaggagctccttccatagatgtattcggggaataccg 5039519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 5069971 - 5069912
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||  ||| ||||||||| ||||| |||||||||||    
T  5069971 ttgtttgggctccagtggcaaggagcttcttctaaggacgtacccgggaaataccgggtt 5069912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 246 - 297
Target Start/End: Original strand, 16802081 - 16802132
Alignment:
Q  246 tgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||||| ||||||| |||||| ||||||||||||| ||||||||||||||    
T  16802081 tgggctccagtggcaatgagctccttccaaggacgtacccggggaataccgg 16802132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 21530693 - 21530760
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| || |||||| |||||||||||||| ||||||||||||| | ||||||||| |||||    
T  21530693 aaaccaagttgcttcggctccagtggcaaggagctccttccaaggacgtacctggggaatactgggtt 21530760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 22973912 - 22973979
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||   |||| |||||||| |||||||||||||  ||||||||||||||||    
T  22973912 aaaccaagttgtttgggctctaatggcgaggagctccttccaaggacgtactcggggaataccgggtt 22973979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 234 - 297
Target Start/End: Complemental strand, 27875250 - 27875188
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||| ||||||||||||| |||||||| ||||| |||||| |||||||| ||||||||||||    
T  27875250 aaccaagttgtttgggctccagtggcaagtagctccttccaa-gacgtatctggggaataccgg 27875188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 42032049 - 42032108
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| || ||||| ||||| ||||||||||||| |||||||||||| ||||    
T  42032049 ttgtttgggctccagtagcaagaagctccttccaaggacgtacccggggaatacctggtt 42032108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 250 - 297
Target Start/End: Complemental strand, 42210409 - 42210362
Alignment:
Q  250 ctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||| |||||||||||||| ||||||||||||||||| ||||||||||    
T  42210409 ctccagtggcaaggagctctttccaaggacgtatccgaggaataccgg 42210362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 14650263 - 14650329
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||| |||  |||||||||||||| ||||||||||||| |||| ||||| ||||||    
T  14650263 aaccaagttgtttggactctagtggcaaggagctccttccaaggacgtacccggagaatatcgggtt 14650329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 26423450 - 26423384
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||| | ||| ||||||||||||| ||  |||||||||||||    
T  26423450 aaccaagttgtttgggctccagtggcaagaaactccttccaaggacgtacccaaggaataccgggtt 26423384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 45960165 - 45960104
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||||||| ||||| || ||||||||||| |||||||||||||| ||||||||||||    
T  45960165 aaccaagttgtttgagctccagtagcaaggagctctttccaaggacgtat-cggggaataccg 45960104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 233 - 282
Target Start/End: Complemental strand, 19914866 - 19914817
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    ||||||| ||| ||||||||| |||||||||||||| |||||||||||||    
T  19914866 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgta 19914817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 232 - 300
Target Start/End: Original strand, 1605885 - 1605953
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| |||||||| ||||  || |||||||||| ||||||||||||| |||| ||||||| ||||    
T  1605885 caaaccaagttgtttggactccaatgacaaggagctccttccaaggacgtacccggagaatacctggtt 1605953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 245 - 293
Target Start/End: Original strand, 11607088 - 11607136
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    ||||||||| |||||||||| ||| |||||||||||||| |||||||||    
T  11607088 ttgggctccagtggcaaggaactccttccaaggacgtattcggggaata 11607136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 284
Target Start/End: Complemental strand, 4706140 - 4706097
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatc 284  Q
    |||||||| ||||||||||||||||||| |||||| ||||||||    
T  4706140 ttgtttggactccggtggcaaggagctccttccaatgacgtatc 4706097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 23823895 - 23823954
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| |||||||  ||||||||| ||||||||| ||| ||||||||||||| ||||||    
T  23823895 aaccaagttgtttgcactccggtggtaaggagctccttctaaggacgtatccgaggaata 23823954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 24969480 - 24969421
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||  || |||||||||||| ||  |||||||||||    
T  24969480 ttgtttgggctccagtggcaaggagcttttttcaaggacgtatctggaaaataccgggtt 24969421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 297
Target Start/End: Original strand, 39420784 - 39420847
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||| ||| ||||||||  |||||||||||||| || |||||| ||| ||||||||||||||    
T  39420784 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggaggtacccggggaataccgg 39420847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 4973273 - 4973207
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||  || |||||||||  |||||||||| ||| ||||||||| ||||||    
T  4973273 aaccaagttgtttgggctccactgacaaggagcttcttccaaggacttattcggggaatatcgggtt 4973207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 241 - 295
Target Start/End: Original strand, 46414628 - 46414682
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    ||||||||||||| |||||||||||||| ||  ||||||||| ||| ||||||||    
T  46414628 ttgtttgggctcccgtggcaaggagctccttttaaggacgtacccgtggaatacc 46414682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Complemental strand, 21190914 - 21190877
Alignment:
Q  263 gagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||| ||||||||||||||||||||    
T  21190914 gagctccttccaaggacttatccggggaataccgggtt 21190877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 232 - 289
Target Start/End: Original strand, 39474883 - 39474940
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccgggg 289  Q
    |||||||| |||||||| |||  |||| ||||||||| |||||| |||||||||||||    
T  39474883 caaaccaagttgtttggactctagtggtaaggagctctttccaaagacgtatccgggg 39474940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 293
Target Start/End: Original strand, 23658133 - 23658184
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    ||||||||||||| |||||||||||||| || |||||||||| || |||||||    
T  23658133 ttgtttgggctccagtggcaaggagctcctt-caaggacgtacccagggaata 23658184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 43)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 1446774 - 1446840
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  1446774 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 1446840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 29895735 - 29895801
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  29895735 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 29895801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 5473004 - 5472945
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  5473004 ttgtttgggctccagtggcaaggagctcatttcaaggacgtatccggggaataccaggtt 5472945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 38165974 - 38166041
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||||||||  ||||||||||||| ||||||||||||||||||||||||| |||||    
T  38165974 aaaccaagttgtttgggctccactggcaaggagctccttccaaggacgtatccggggaatactgggtt 38166041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 27248376 - 27248442
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| ||||||| |||||| |||||||||||||||||||||||||||||||    
T  27248376 aaccaagttgcttgggctccagtggcaacgagctccttccaaggacgtatccggggaataccgggtt 27248442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 34667765 - 34667699
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  34667765 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 34667699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 250 - 300
Target Start/End: Complemental strand, 36145362 - 36145312
Alignment:
Q  250 ctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  36145362 ctccggtggcaaggagctcattccaaggacgtacccggggaataccgggtt 36145312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 53599008 - 53599074
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||  ||||||||||||| ||||||||||||| |||||||||||||||||    
T  53599008 aaccaagttgtttgggctccattggcaaggagctccttccaaggacgtacccggggaataccgggtt 53599074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 6032792 - 6032737
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  6032792 ttgggctccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 6032737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 13552069 - 13552128
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| |||||||||||||| ||||||| |||||||||||||||| ||||||    
T  13552069 ttgtttgggctccagtggcaaggagctccttccaagcacgtatccggggaatatcgggtt 13552128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 292
Target Start/End: Original strand, 14567198 - 14567257
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaat 292  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  14567198 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 14567257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 55920981 - 55921048
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||||||| | |||||||||||||||||    
T  55920981 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgcacccggggaataccgggtt 55921048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 8888970 - 8889036
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  | |||||||||||| ||| |||||||||||||||||||||||||||    
T  8888970 aaccaagttgtttgggctctagcggcaaggagctccttctaaggacgtatccggggaataccgggtt 8889036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 41339558 - 41339492
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||| ||||||||||||| |||| ||||||||||||    
T  41339558 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccggagaataccgggtt 41339492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 47078406 - 47078472
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||| ||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  47078406 aaccaagttgcttgggttccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 47078472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 2559254 - 2559318
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||| ||||||||||||| ||||||| |||||| ||||||||||||| | ||||||||||||    
T  2559254 aaaccaagttgtttgggctccagtggcaacgagctccttccaaggacgtacctggggaataccgg 2559318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 1940938 - 1940871
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||  |||||||||||||| ||||||||||||| ||||| |||| ||||||    
T  1940938 aaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggtt 1940871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 27531821 - 27531754
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||| |||| |||||||||||||| ||||||||||||| || ||||||||||||||    
T  27531821 aaaccaagttgcttggactccagtggcaaggagctccttccaaggacgtacccagggaataccgggtt 27531754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 300
Target Start/End: Complemental strand, 40272487 - 40272428
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||||||| ||||||||| |||||| || |||||||||||||| ||||||    
T  40272487 ttgtttgggctccggtggtaaggagctctttccaatgatgtatccggggaatatcgggtt 40272428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 6779159 - 6779225
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||  ||||||||||||| | || ||||||||||||    
T  6779159 aaccaagttgtttgggctccagtggcaaggagcttcttccaaggacgtacctggagaataccgggtt 6779225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 19651608 - 19651546
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||||||||||||| ||||||| |||||| |||||||||||||||||  ||||||||    
T  19651608 aaccaagttgtttgggctccagtggcaatgagctccttccaaggacgtatccgaagaataccg 19651546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 24166398 - 24166464
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||  |||||||||| |||||    
T  24166398 aaccaagttgattgggctccagtggcaaggagctccttccaaggacgtactcggggaatactgggtt 24166464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 33647669 - 33647735
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||  |||||||||||||| || |||||||||||| |||||||||||||||    
T  33647669 aaccaagttgcttgggctctagtggcaaggagctcctttcaaggacgtatctggggaataccgggtt 33647735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 38075381 - 38075447
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| | ||||||||| || |||||||||||||| ||| ||||||||||||    
T  38075381 aaccaagttgtttgggctccagcggcaaggagttccttccaaggacgtattcggagaataccgggtt 38075447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 41163045 - 41162983
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| ||||||||| ||| |||||||||| ||||||||||||||||||| |||||||    
T  41163045 aaccaagttgcttgggctccagtgacaaggagctccttccaaggacgtatccgggaaataccg 41162983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 52950030 - 52950096
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||| ||||||||||||| | |||||||| ||||||    
T  52950030 aaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacctggggaatatcgggtt 52950096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 227 - 296
Target Start/End: Complemental strand, 3574616 - 3574547
Alignment:
Q  227 caaaccaaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||| |||||||| ||| ||||||||| |||||||||||||| ||||||||||||| |  ||||||||||    
T  3574616 caaaacaaaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtacctagggaataccg 3574547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 255 - 295
Target Start/End: Complemental strand, 24850768 - 24850728
Alignment:
Q  255 gtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  24850768 gtggcaaggagctcattccaaggacgtatccgggaaatacc 24850728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 234 - 294
Target Start/End: Original strand, 43458561 - 43458621
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||| ||||||||| |||||||| ||||||||||||||||||||  |||||||||    
T  43458561 aaccaagttgcttgggctccagtggcaagaagctcattccaaggacgtatttggggaatac 43458621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 15732612 - 15732545
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||||||| |  |  |||||||||||||||||| ||||||||||||    
T  15732612 aaaccaagttgtttgggctccagtggcaagaaaattcttccaaggacgtatccggagaataccgggtt 15732545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 29588695 - 29588750
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| ||||||||||||||||||||| |||||  ||||| |||||||||||    
T  29588695 ttgggctccagtggcaaggagctcattccaaagacgtgcccgggaaataccgggtt 29588750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 295
Target Start/End: Complemental strand, 295688 - 295634
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    ||||||||||||| |||||||||| | | ||| ||||||||||||||||||||||    
T  295688 ttgtttgggctccagtggcaaggaacaccttctaaggacgtatccggggaatacc 295634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 7000472 - 7000534
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||||||||||| | |||||||| ||||| |||||||||||||  ||||||||||||    
T  7000472 aaccaagttgtttgggctacagtggcaagaagctccttccaaggacgtactcggggaataccg 7000534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 248 - 300
Target Start/End: Complemental strand, 15840083 - 15840031
Alignment:
Q  248 ggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||| |||||||||||||   |||||||||||||||    
T  15840083 ggctccagtggcaaggagctccttccaaggacgtacttggggaataccgggtt 15840031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 256 - 300
Target Start/End: Original strand, 38168227 - 38168271
Alignment:
Q  256 tggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||| ||||||||||||| |||||||||||| ||||    
T  38168227 tggcaaggagctccttccaaggacgtacccggggaataccaggtt 38168271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 296
Target Start/End: Original strand, 13073485 - 13073548
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||| ||||||||||||  ||||||| |||||| ||||||||||||| | || ||||||||    
T  13073485 aaaccaagttgtttgggctctagtggcaatgagctccttccaaggacgtacctggagaataccg 13073548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 15829647 - 15829706
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||||||||||||| ||| |||||||||  || ||||||||||||||| |||||    
T  15829647 aaccaagttgtttgggctccagtgacaaggagcttctttcaaggacgtatccggagaata 15829706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 257 - 300
Target Start/End: Original strand, 20128280 - 20128323
Alignment:
Q  257 ggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||| || ||||||||||||||||||||||||| |||||    
T  20128280 ggcaaggagttccttccaaggacgtatccggggaatactgggtt 20128323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 234 - 293
Target Start/End: Original strand, 31588632 - 31588691
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    |||||| ||||||||||| | ||| |||||||||| ||| |||||||||| |||||||||    
T  31588632 aaccaagttgtttgggcttcagtgtcaaggagctcgttctaaggacgtattcggggaata 31588691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 249 - 300
Target Start/End: Complemental strand, 36262913 - 36262862
Alignment:
Q  249 gctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| |||||||| ||||| ||||||||||||| |||| ||||||||||||    
T  36262913 gctccagtggcaagaagctccttccaaggacgtacccggagaataccgggtt 36262862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 4736545 - 4736611
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||| ||||| ||||||| |||||| || |||||| ||| ||| |||||||||||||    
T  4736545 aaccaagttgtttgagctccagtggcaatgagctcctttcaaggatgtacccgaggaataccgggtt 4736611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 26480112 - 26480050
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| |||||||||||||  ||||||||||||| ||||||| |||||   |||||||||||    
T  26480112 aaccaagttgtttgggctccactggcaaggagctccttccaagtacgtacatggggaataccg 26480050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 233 - 283
Target Start/End: Complemental strand, 48317439 - 48317389
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtat 283  Q
    ||||||| ||| ||||||||| ||||||| ||||||||||||| |||||||    
T  48317439 aaaccaagttgcttgggctccagtggcaaagagctcattccaatgacgtat 48317389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 51; Significance: 3e-20; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 13893869 - 13893935
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||| ||||||||||||||||||    
T  13893869 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtgtccggggaataccgggtt 13893935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 25294903 - 25294969
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  25294903 aaccaagttgcttgggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 25294969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 45877397 - 45877463
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||| | |||||||||||||||||||||||||||||||    
T  45877397 aaccaagttgtttgggctccagtggcaaggagccccttccaaggacgtatccggggaataccgggtt 45877463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 15320128 - 15320195
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| |||||||| |||| |||||||||||||| ||||||||||||| |||||||||||||||||    
T  15320128 aaaccaagttgtttggactccagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 15320195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 33251604 - 33251671
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||||||||||| |||||| ||||||||||||||  |||||||||||||||    
T  33251604 aaaccaagttgtttgggctccggtggcaatgagctccttccaaggacgtattaggggaataccgggtt 33251671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 42412939 - 42412872
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||||||||  ||||||||||||| |||||||||||||||||||||||||||||||    
T  42412939 aaaccaagttgcttgggctccaatggcaaggagctccttccaaggacgtatccggggaataccgggtt 42412872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 54261168 - 54261235
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||||||||    
T  54261168 aaaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggtt 54261235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 48341963 - 48342029
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||||||| | |||||||||||||||    
T  48341963 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtacctggggaataccgggtt 48342029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 232 - 297
Target Start/End: Original strand, 29135854 - 29135919
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    |||||||| ||| ||||||||| |||||||||||||  ||||||||||||||||||||||||||||    
T  29135854 caaaccaaattgcttgggctccagtggcaaggagcttcttccaaggacgtatccggggaataccgg 29135919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 288
Target Start/End: Complemental strand, 32873713 - 32873658
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggg 288  Q
    ||||||| ||||||||||||| |||||||||||||||||||||||||||| |||||    
T  32873713 aaaccaagttgtttgggctccagtggcaaggagctcattccaaggacgtacccggg 32873658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 49543461 - 49543528
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||||||||   |||||||||||||| |||||||||||||||| ||||||| ||||||    
T  49543461 aaaccaatttgtttgggctttagtggcaaggagctccttccaaggacgtatcccgggaatatcgggtt 49543528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 26207965 - 26207899
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||||||||| ||| |||||||||||||||||    
T  26207965 aaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtacccggggaataccgggtt 26207899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 29127862 - 29127928
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||||||||| || ||||||||||||||| |||||||| ||||||    
T  29127862 aaccaagttgtttgggctccagtggcaaggagatccttccaaggacgtatctggggaatatcgggtt 29127928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 46530034 - 46529968
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| || |||||||||| | |||||||||||||||    
T  46530034 aaccaagttgtttgggctccagtggcaaggagctcctttcaaggacgtacctggggaataccgggtt 46529968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 51683118 - 51683052
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||| |||||||| |||||| ||||||||||||||||||| ||||    
T  51683118 aaccaagttgtttgggctccagtggcgaggagctccttccaaagacgtatccggggaataccaggtt 51683052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 300
Target Start/End: Original strand, 6462366 - 6462421
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||  |||||||||||||| ||||||||||||||| |||||||||||||||    
T  6462366 ttgggctctagtggcaaggagctccttccaaggacgtatctggggaataccgggtt 6462421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 296
Target Start/End: Original strand, 49082774 - 49082829
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||||||||| |||||| ||||||| ||| |||||||||||||||||||||||    
T  49082774 ttgtttgggctccagtggcagggagctccttctaaggacgtatccggggaataccg 49082829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 10040500 - 10040566
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||| |||||||||||||| ||| ||||||||| |||||||||| ||||||    
T  10040500 aaccaagttgcttgggctccagtggcaaggagctccttctaaggacgtacccggggaatatcgggtt 10040566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 11687273 - 11687207
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||| ||||| ||||||||||||| | || ||||||||||||    
T  11687273 aaccaagttgtttgggctccagtggcaagaagctccttccaaggacgtacctggagaataccgggtt 11687207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 29762320 - 29762254
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggt 299  Q
    ||||||| ||| ||||||||| |||||||||||||| ||||||||| |||| ||||||||| |||||    
T  29762320 aaaccaagttgcttgggctccagtggcaaggagctccttccaaggatgtattcggggaatatcgggt 29762254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 35315899 - 35315965
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||||||| |||||| ||||||||||||| |||| ||||| ||||||    
T  35315899 aaccaagttgtttgggctccagtggcaaagagctccttccaaggacgtacccggagaatatcgggtt 35315965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 40944826 - 40944888
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| |||||||||||||||||| ||||| |||||||||||||||| | ||||||||    
T  40944826 aaccaagttgcttgggctccggtggcaagaagctccttccaaggacgtatccagagaataccg 40944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 47749268 - 47749202
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||| || |||||  |||||||||||||||| ||||||||||||||    
T  47749268 aaccaaattgtttgggctccagtggtaatgagcttcttccaaggacgtatccagggaataccgggtt 47749202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 49198294 - 49198360
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||| ||||||| |  |||||||||| ||||||||||||||||||||    
T  49198294 aaccaagttgtttgggctccagtgacaaggagtttcttccaaggacatatccggggaataccgggtt 49198360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 3136850 - 3136794
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||||||||| |||||||| ||||| || |||||||||| ||||||||||||||    
T  3136850 ttgtttgggctcccgtggcaagaagctcctttcaaggacgtacccggggaataccgg 3136794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 10043100 - 10043159
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||  |||||| |||||| || ||||||||||||||||||||| ||||||    
T  10043100 ttgtttgggctccactggcaatgagctcctttcaaggacgtatccggggaatatcgggtt 10043159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 28242220 - 28242287
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||| |||||||||| || |||||| |||||| ||||||||||| ||||||||||||    
T  28242220 aaaccaagttgcttgagctccggtggtaaagagctccttccaatgacgtatccggagaataccgggtt 28242287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 296
Target Start/End: Complemental strand, 30735102 - 30735047
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    ||||||||||||  |||||||||||||||||||||||||| |  ||||||||||||    
T  30735102 ttgtttgggctctagtggcaaggagctcattccaaggacgcactcggggaataccg 30735047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 33560810 - 33560869
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||| | |||||||||||||| ||||||||| ||| | |||||||||||||||    
T  33560810 ttgtttgggcttcagtggcaaggagctccttccaaggatgtacctggggaataccgggtt 33560869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Original strand, 3755513 - 3755575
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| |||| |||| ||||||| |||||| || ||||||||||||||||||||||||    
T  3755513 aaccaagttgcttggactccagtggcaaagagctcttttcaaggacgtatccggggaataccg 3755575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 7310867 - 7310801
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||||||||||| |||||| ||||||| ||||| | | |||||||||||||    
T  7310867 aaccaagttgattgggctccggtggcaatgagctccttccaagaacgtacctgaggaataccgggtt 7310801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 10855327 - 10855393
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| ||||||||| |||   ||| |||||||||||    
T  10855327 aaccaagttgtttgggctccagtggcaaggagctccttccaaggatgtacttgggaaataccgggtt 10855393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 41630676 - 41630610
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||| |||||||||| ||||| ||||||| ||||  |||||||||||    
T  41630676 aaccaagttgtttgggctccagtgacaaggagctccttccatggacgtaaccggaaaataccgggtt 41630610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 235 - 300
Target Start/End: Complemental strand, 35923786 - 35923721
Alignment:
Q  235 accaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| ||||||||||||  ||||||| |||||||||||||||||||| | || ||||||| ||||    
T  35923786 accaagttgtttgggctctagtggcaatgagctcattccaaggacgtacctggagaataccaggtt 35923721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 22405700 - 22405644
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||||||||| |||||||||||||| | |||| |||||||||| | ||||||||    
T  22405700 ttgtttgggctccagtggcaaggagctcctaccaatgacgtatccgtgaaataccgg 22405644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 293
Target Start/End: Complemental strand, 37092670 - 37092610
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaata 293  Q
    ||||||| ||| ||||||||| |||||||||||||  ||||||||||||| ||| ||||||    
T  37092670 aaaccaagttgcttgggctccagtggcaaggagcttcttccaaggacgtacccgtggaata 37092610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 7328786 - 7328853
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||| ||||  ||||||||||| || ||||||||||||| ||||| |||||||||||    
T  7328786 aaaccaagttgcttgtgctctagtggcaaggagttccttccaaggacgtacccgggaaataccgggtt 7328853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Complemental strand, 11025536 - 11025470
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||| |||| ||||||| | ||||||||||||||| |||||||||| ||||    
T  11025536 aaaccaagttgcttgggctccagtggtaaggagccc-ttccaaggacgtatctggggaataccaggtt 11025470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 31072828 - 31072887
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||  ||||||||||||| || |||||||||| |||| ||||||| ||||    
T  31072828 ttgtttgggctccaatggcaaggagctcctttcaaggacgtacccggagaataccaggtt 31072887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 47303642 - 47303587
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||||||| ||||||||  ||||||||||||||||||  |||| ||||||    
T  47303642 ttgggctccggtggtaaggagctttttccaaggacgtatccggaaaatatcgggtt 47303587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 47471774 - 47471841
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| ||||||||  ||||||| |||||| ||||||||||||| |  ||||||||||||||    
T  47471774 aaaccaagttgcttgggctctagtggcaaagagctccttccaaggacgtacctagggaataccgggtt 47471841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 261 - 300
Target Start/End: Original strand, 53649697 - 53649736
Alignment:
Q  261 aggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||| |||||||||||||| ||||||||||||||||    
T  53649697 aggagctccttccaaggacgtattcggggaataccgggtt 53649736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 242 - 300
Target Start/End: Complemental strand, 7613082 - 7613024
Alignment:
Q  242 tgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| || | |||||||||||||| |||||||||||||   |||||||||||||||    
T  7613082 tgtttggacttcagtggcaaggagctccttccaaggacgtacttggggaataccgggtt 7613024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 232 - 282
Target Start/End: Original strand, 39849013 - 39849063
Alignment:
Q  232 caaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||||| | | ||||||||| |||||||||||||| |||||||||||||    
T  39849013 caaaccaagtcgcttgggctccagtggcaaggagctccttccaaggacgta 39849063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 51060445 - 51060379
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||| |||| |||||||  ||||| |||||||||  ||||||||||||| ||||||    
T  51060445 aaccaagttgtttggactccagtggcaaatagctccttccaaggatctatccggggaatatcgggtt 51060379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 55069843 - 55069777
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| ||| ||| |||||| || ||||||||||| | |||||||| |||||    
T  55069843 aaccaagttgtttgggctccagtgacaatgagctcttttcaaggacgtattcagggaatactgggtt 55069777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 234 - 295
Target Start/End: Original strand, 928543 - 928604
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatacc 295  Q
    |||||| |||||| |||||   ||||||||||||||||||||||||||| |  |||||||||    
T  928543 aaccaagttgtttaggctcaactggcaaggagctcattccaaggacgtacctagggaatacc 928604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 263 - 300
Target Start/End: Original strand, 47219116 - 47219153
Alignment:
Q  263 gagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||||||||||||||| ||||    
T  47219116 gagctctttccaaggacgtatccggggaataccaggtt 47219153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 233 - 297
Target Start/End: Original strand, 3762993 - 3763057
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgg 297  Q
    ||||||| ||||||| ||||  ||| ||| |||||| || |||||||||||||||| ||||||||    
T  3762993 aaaccaagttgtttgagctctagtgacaaagagctcctttcaaggacgtatccgggaaataccgg 3763057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 282
Target Start/End: Complemental strand, 37320053 - 37320006
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgta 282  Q
    |||||| ||||||||||| || |||||||||| ||||||||||||||||    
T  37320053 aaccaagttgtttgggcttcg-tggcaaggagttcattccaaggacgta 37320006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 45; Significance: 1e-16; HSPs: 3)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 248 - 300
Target Start/End: Original strand, 319382 - 319434
Alignment:
Q  248 ggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  319382 ggctccagtggcaaggagctccttccaaggacgtatccggggaataccgggtt 319434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 516 - 582
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||  |||||||||||||| ||||||||||||| |||||||||||||||||    
T  516 aaccaagttgcttgggctctagtggcaaggagctccttccaaggacgtacccggggaataccgggtt 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 296
Target Start/End: Complemental strand, 412189 - 412127
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccg 296  Q
    |||||| ||| ||||||| | ||||| | |||||| |||||||||||||||||||||||||||    
T  412189 aaccaagttgcttgggcttcagtggcgatgagctccttccaaggacgtatccggggaataccg 412127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 44; Significance: 5e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 233 - 292
Target Start/End: Complemental strand, 250177 - 250118
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaat 292  Q
    ||||||| ||| ||||||||| |||||||||||||||||||||||||||| |||||||||    
T  250177 aaaccaagttgcttgggctccagtggcaaggagctcattccaaggacgtacccggggaat 250118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 300
Target Start/End: Complemental strand, 271237 - 271171
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| |||||||| ||||||||||||||| ||||||||||||| |||| ||||| ||||||    
T  271237 aaccaagttgcttgggctctggtggcaaggagctccttccaaggacgtacccggagaatatcgggtt 271171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 68462 - 68529
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||||||||||||  |||||||||||||| ||||||||||||| ||||| |||| ||||||    
T  68462 aaaccaagttgtttgggctctagtggcaaggagctccttccaaggacgtacccgggaaatatcgggtt 68529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 234 - 284
Target Start/End: Complemental strand, 8873 - 8823
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatc 284  Q
    |||||| ||||||||||||| |||||||||||||| |||||||||||||||    
T  8873 aaccaagttgtttgggctccagtggcaaggagctccttccaaggacgtatc 8823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 300
Target Start/End: Original strand, 15284 - 15343
Alignment:
Q  241 ttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||||||||  |||||||||||||| || |||||| ||| |||||||||||||||||    
T  15284 ttgtttgggctctagtggcaaggagctccttacaaggaagtacccggggaataccgggtt 15343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 40990 - 41056
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||| |||||||||||||| ||||| |||||||  | ||||||| ||||||    
T  40990 aaccaagttgtttgggctccagtggcaaggagctccttccatggacgtactcagggaatatcgggtt 41056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 233 - 300
Target Start/End: Original strand, 12615 - 12682
Alignment:
Q  233 aaaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||||| ||| |||| |||  |||||||| ||||| ||||||||||||  |||||||||||||||||    
T  12615 aaaccaagttgcttggactctagtggcaagaagctccttccaaggacgtgcccggggaataccgggtt 12682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 245 - 300
Target Start/End: Complemental strand, 95131 - 95076
Alignment:
Q  245 ttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||||||  ||||||||||||| ||||||| | |||||||||||||||| ||||    
T  95131 ttgggctccaatggcaaggagctccttccaagaaagtatccggggaataccaggtt 95076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0209 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 12521 - 12587
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||||||||||||  |||||||||||||  |||||||||||||  || | |||||||||||    
T  12521 aaccaagttgtttgggctctagtggcaaggagctacttccaaggacgtactcgagaaataccgggtt 12587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 234 - 300
Target Start/End: Original strand, 9382 - 9448
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaataccgggtt 300  Q
    |||||| ||| ||||||||||||  |||||||||| || ||||||||||   |||||||||||||||    
T  9382 aaccaagttgcttgggctccggtaacaaggagctcctttcaaggacgtacttggggaataccgggtt 9448  T

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Target: scaffold0079 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 264 - 300
Target Start/End: Original strand, 8151 - 8187
Alignment:
Q  264 agctcattccaaggacgtatccggggaataccgggtt 300  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  8151 agctccttccaaggacgtacccggggaataccgggtt 8187  T

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Target: scaffold0010 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 234 - 294
Target Start/End: Complemental strand, 25947 - 25887
Alignment:
Q  234 aaccaatttgtttgggctccggtggcaaggagctcattccaaggacgtatccggggaatac 294  Q
    |||||| ||||||||||||| || |||| |||||| ||||||| |||||  ||||||||||    
T  25947 aaccaagttgtttgggctccagtagcaaagagctccttccaagtacgtactcggggaatac 25887  T

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