View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8485_high_7 (Length: 318)

Name: NF8485_high_7
Description: NF8485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8485_high_7
NF8485_high_7
[»] scaffold0028 (4 HSPs)
scaffold0028 (50-291)||(107653-107894)
scaffold0028 (109-291)||(89323-89505)
scaffold0028 (204-304)||(130880-130979)
scaffold0028 (50-88)||(99070-99108)
[»] chr3 (51 HSPs)
chr3 (109-318)||(14842405-14842612)
chr3 (109-290)||(13839106-13839286)
chr3 (204-318)||(23492696-23492810)
chr3 (118-236)||(19232002-19232121)
chr3 (109-304)||(2050022-2050217)
chr3 (204-318)||(5228619-5228733)
chr3 (109-290)||(12030019-12030198)
chr3 (219-318)||(18896879-18896978)
chr3 (219-318)||(18911315-18911414)
chr3 (219-318)||(15468175-15468274)
chr3 (118-248)||(19260737-19260865)
chr3 (110-236)||(16744041-16744165)
chr3 (219-318)||(25059061-25059160)
chr3 (109-199)||(15858986-15859075)
chr3 (204-318)||(54651764-54651879)
chr3 (219-318)||(16821458-16821556)
chr3 (219-286)||(8268600-8268667)
chr3 (219-286)||(8275700-8275767)
chr3 (219-308)||(22275531-22275619)
chr3 (204-291)||(11986025-11986112)
chr3 (1-51)||(16744436-16744486)
chr3 (204-304)||(17912328-17912430)
chr3 (204-279)||(38168237-38168312)
chr3 (109-160)||(51158018-51158069)
chr3 (204-318)||(53771365-53771480)
chr3 (204-282)||(2449106-2449184)
chr3 (5-54)||(2449388-2449437)
chr3 (204-309)||(15615137-15615242)
chr3 (109-161)||(2449237-2449289)
chr3 (219-279)||(41270395-41270455)
chr3 (204-318)||(16261777-16261892)
chr3 (204-279)||(33342204-33342279)
chr3 (216-286)||(13954754-13954824)
chr3 (204-278)||(14285289-14285363)
chr3 (216-286)||(45861134-45861204)
chr3 (50-99)||(19689980-19690029)
chr3 (109-161)||(17912482-17912533)
chr3 (204-256)||(51961011-51961063)
chr3 (219-279)||(55316539-55316599)
chr3 (118-161)||(13954889-13954932)
chr3 (118-161)||(13975721-13975764)
chr3 (204-304)||(30153265-30153367)
chr3 (118-161)||(45861026-45861069)
chr3 (219-304)||(12264641-12264726)
chr3 (204-256)||(19947026-19947078)
chr3 (122-161)||(11986165-11986204)
chr3 (201-236)||(15857163-15857198)
chr3 (50-88)||(28356329-28356367)
chr3 (219-304)||(1467589-1467673)
chr3 (109-154)||(15936633-15936678)
chr3 (57-89)||(48983860-48983892)
[»] chr7 (50 HSPs)
chr7 (109-290)||(13036884-13037065)
chr7 (109-290)||(11580607-11580790)
chr7 (109-290)||(16211978-16212157)
chr7 (109-304)||(36052876-36053073)
chr7 (171-318)||(15759949-15760096)
chr7 (109-235)||(3060178-3060302)
chr7 (171-318)||(14250734-14250880)
chr7 (219-307)||(15950638-15950725)
chr7 (219-286)||(13758692-13758759)
chr7 (109-309)||(13321228-13321440)
chr7 (219-279)||(13572996-13573056)
chr7 (219-279)||(15927890-15927950)
chr7 (219-279)||(18979895-18979955)
chr7 (128-291)||(36024372-36024540)
chr7 (204-304)||(15516691-15516793)
chr7 (109-316)||(25292173-25292389)
chr7 (109-286)||(7293228-7293415)
chr7 (1-54)||(15441714-15441767)
chr7 (1-54)||(30262279-30262332)
chr7 (147-291)||(15709408-15709556)
chr7 (1-54)||(11516287-11516340)
chr7 (109-282)||(30261997-30262180)
chr7 (204-316)||(14113823-14113935)
chr7 (136-234)||(295893-295990)
chr7 (1-51)||(7292908-7292958)
chr7 (204-282)||(11516544-11516622)
chr7 (204-282)||(15441432-15441510)
chr7 (109-256)||(47480924-47481082)
chr7 (50-99)||(611915-611964)
chr7 (219-304)||(2437778-2437862)
chr7 (109-161)||(11516439-11516491)
chr7 (216-316)||(14423474-14423574)
chr7 (109-161)||(15441563-15441615)
chr7 (204-304)||(25124450-25124552)
chr7 (204-318)||(42056105-42056220)
chr7 (117-161)||(14113988-14114032)
chr7 (117-161)||(14423638-14423682)
chr7 (204-279)||(2029244-2029319)
chr7 (50-100)||(13934756-13934806)
chr7 (219-304)||(7823050-7823134)
chr7 (219-304)||(7830361-7830445)
chr7 (219-304)||(27176755-27176839)
chr7 (204-318)||(2190002-2190117)
chr7 (204-279)||(3049905-3049980)
chr7 (204-237)||(371417-371450)
chr7 (109-154)||(18253841-18253886)
chr7 (219-304)||(27101487-27101571)
chr7 (219-304)||(27108835-27108919)
chr7 (219-304)||(38783579-38783663)
chr7 (205-241)||(10000282-10000318)
[»] chr4 (44 HSPs)
chr4 (109-291)||(13246642-13246824)
chr4 (109-236)||(54118168-54118295)
chr4 (109-304)||(122101-122296)
chr4 (109-291)||(15674954-15675140)
chr4 (219-318)||(7131900-7131999)
chr4 (219-318)||(14996460-14996559)
chr4 (219-318)||(17145492-17145591)
chr4 (109-250)||(33240912-33241057)
chr4 (109-291)||(10104115-10104301)
chr4 (219-318)||(47357973-47358071)
chr4 (219-318)||(18169292-18169389)
chr4 (126-291)||(31132543-31132712)
chr4 (204-279)||(14952085-14952160)
chr4 (219-286)||(20001045-20001112)
chr4 (219-286)||(26339341-26339408)
chr4 (219-279)||(15287119-15287179)
chr4 (219-279)||(15294228-15294288)
chr4 (219-279)||(22351938-22351998)
chr4 (1-51)||(26680092-26680142)
chr4 (204-286)||(26680517-26680599)
chr4 (205-286)||(55376444-55376525)
chr4 (204-318)||(15135824-15135939)
chr4 (204-318)||(15272128-15272243)
chr4 (204-282)||(16608967-16609045)
chr4 (50-99)||(117332-117381)
chr4 (5-54)||(10488626-10488675)
chr4 (5-54)||(16328076-16328125)
chr4 (109-161)||(10488774-10488826)
chr4 (109-161)||(16327925-16327977)
chr4 (109-161)||(26680412-26680464)
chr4 (204-282)||(16327794-16327872)
chr4 (50-99)||(14912580-14912629)
chr4 (211-286)||(13048085-13048160)
chr4 (130-176)||(7850233-7850279)
chr4 (204-278)||(32460561-32460635)
chr4 (204-256)||(14500092-14500144)
chr4 (216-282)||(10488891-10488957)
chr4 (50-88)||(26817472-26817510)
chr4 (50-88)||(54694556-54694594)
chr4 (204-237)||(8045272-8045305)
chr4 (204-237)||(16523146-16523179)
chr4 (204-277)||(40885418-40885491)
chr4 (109-161)||(13048220-13048272)
chr4 (205-241)||(22738577-22738613)
[»] scaffold0175 (1 HSPs)
scaffold0175 (109-317)||(801-1007)
[»] chr6 (32 HSPs)
chr6 (109-291)||(23153659-23153841)
chr6 (113-318)||(1657579-1657795)
chr6 (109-318)||(15862683-15862903)
chr6 (148-291)||(23148247-23148390)
chr6 (171-318)||(1556279-1556426)
chr6 (219-318)||(19610340-19610439)
chr6 (204-318)||(4991396-4991510)
chr6 (219-279)||(16232214-16232274)
chr6 (219-279)||(18086697-18086757)
chr6 (219-286)||(23978091-23978158)
chr6 (204-291)||(27751742-27751829)
chr6 (219-279)||(29869650-29869710)
chr6 (264-318)||(16240401-16240455)
chr6 (204-318)||(23995247-23995362)
chr6 (204-309)||(29666181-29666287)
chr6 (50-99)||(9000029-9000078)
chr6 (50-99)||(9009194-9009243)
chr6 (109-277)||(14626003-14626169)
chr6 (204-282)||(1649975-1650053)
chr6 (204-278)||(32276617-32276691)
chr6 (109-274)||(35009314-35009490)
chr6 (219-304)||(16376223-16376307)
chr6 (219-304)||(16383547-16383631)
chr6 (219-304)||(22225588-22225672)
chr6 (219-304)||(22251416-22251500)
chr6 (204-256)||(18823263-18823315)
chr6 (204-256)||(18839118-18839170)
chr6 (122-160)||(29666099-29666137)
chr6 (219-304)||(10489021-10489105)
chr6 (219-304)||(16555989-16556073)
chr6 (219-304)||(16632545-16632629)
chr6 (210-278)||(15742078-15742146)
[»] chr5 (51 HSPs)
chr5 (109-291)||(27182416-27182598)
chr5 (171-318)||(23514835-23514982)
chr5 (109-291)||(18530933-18531118)
chr5 (219-318)||(35790933-35791032)
chr5 (109-250)||(22053739-22053884)
chr5 (109-282)||(23507177-23507348)
chr5 (204-304)||(16105967-16106066)
chr5 (219-308)||(17471434-17471522)
chr5 (219-318)||(7425646-7425743)
chr5 (219-286)||(1219387-1219454)
chr5 (219-286)||(23328879-23328946)
chr5 (219-286)||(24616483-24616550)
chr5 (219-286)||(24712859-24712926)
chr5 (219-286)||(24745877-24745944)
chr5 (219-279)||(27010161-27010221)
chr5 (219-318)||(11211899-11211999)
chr5 (211-291)||(23981350-23981430)
chr5 (210-291)||(2032139-2032220)
chr5 (1-54)||(20623029-20623082)
chr5 (1-54)||(21233678-21233731)
chr5 (204-304)||(11343008-11343107)
chr5 (210-309)||(32951018-32951118)
chr5 (204-282)||(20623286-20623364)
chr5 (204-282)||(21233396-21233474)
chr5 (204-282)||(37053061-37053139)
chr5 (50-99)||(723252-723301)
chr5 (5-54)||(25900555-25900604)
chr5 (1-54)||(37052804-37052857)
chr5 (109-161)||(16536409-16536461)
chr5 (109-161)||(20623181-20623233)
chr5 (109-161)||(21233527-21233579)
chr5 (109-161)||(37052956-37053008)
chr5 (204-282)||(16536514-16536592)
chr5 (204-282)||(25900274-25900352)
chr5 (204-281)||(108683-108760)
chr5 (5-54)||(16536261-16536310)
chr5 (109-158)||(25900408-25900457)
chr5 (204-290)||(21651018-21651104)
chr5 (219-304)||(10777820-10777904)
chr5 (219-304)||(21932231-21932315)
chr5 (219-304)||(21938401-21938485)
chr5 (204-277)||(25005137-25005210)
chr5 (204-256)||(7529228-7529280)
chr5 (109-161)||(34939489-34939541)
chr5 (122-157)||(32950920-32950955)
chr5 (50-88)||(24417798-24417836)
chr5 (204-237)||(9730277-9730310)
chr5 (219-304)||(29188133-29188217)
chr5 (219-304)||(35582358-35582442)
chr5 (219-304)||(36989620-36989704)
chr5 (57-89)||(5605759-5605791)
[»] scaffold0012 (2 HSPs)
scaffold0012 (109-281)||(247321-247493)
scaffold0012 (204-318)||(33993-34107)
[»] scaffold0413 (1 HSPs)
scaffold0413 (109-314)||(5912-6115)
[»] chr1 (26 HSPs)
chr1 (109-291)||(20893496-20893677)
chr1 (109-290)||(37844320-37844501)
chr1 (109-290)||(20445891-20446073)
chr1 (109-290)||(20531656-20531837)
chr1 (109-290)||(20913242-20913421)
chr1 (109-236)||(41394434-41394559)
chr1 (109-290)||(20931557-20931736)
chr1 (204-308)||(15861254-15861358)
chr1 (219-286)||(22035769-22035836)
chr1 (219-318)||(22228130-22228229)
chr1 (219-286)||(7640801-7640868)
chr1 (219-318)||(22232827-22232926)
chr1 (219-286)||(46523710-46523777)
chr1 (219-279)||(18598849-18598908)
chr1 (5-54)||(51452556-51452605)
chr1 (219-304)||(18059608-18059692)
chr1 (50-99)||(24821810-24821859)
chr1 (204-282)||(45051726-45051804)
chr1 (216-282)||(51452821-51452887)
chr1 (50-99)||(21756391-21756440)
chr1 (219-279)||(5072260-5072320)
chr1 (109-161)||(51452704-51452756)
chr1 (224-304)||(17148895-17148974)
chr1 (219-304)||(17004960-17005044)
chr1 (219-304)||(38054941-38055025)
chr1 (204-236)||(41218728-41218760)
[»] chr2 (47 HSPs)
chr2 (109-290)||(8891454-8891635)
chr2 (109-281)||(462950-463120)
chr2 (110-290)||(36982310-36982491)
chr2 (109-236)||(19794629-19794755)
chr2 (138-290)||(22863169-22863321)
chr2 (219-318)||(16935915-16936014)
chr2 (219-318)||(17006575-17006674)
chr2 (109-236)||(43642881-43643008)
chr2 (219-318)||(42177804-42177903)
chr2 (109-291)||(24341254-24341440)
chr2 (109-236)||(20627238-20627364)
chr2 (219-286)||(12641509-12641576)
chr2 (219-286)||(8944168-8944235)
chr2 (219-286)||(12635735-12635802)
chr2 (219-286)||(12728714-12728781)
chr2 (219-286)||(23774458-23774525)
chr2 (204-318)||(25213372-25213486)
chr2 (219-286)||(34824797-34824864)
chr2 (219-286)||(3798470-3798537)
chr2 (109-314)||(25265224-25265441)
chr2 (5-54)||(19689551-19689600)
chr2 (204-279)||(20015328-20015403)
chr2 (204-282)||(14906308-14906386)
chr2 (204-282)||(23820388-23820466)
chr2 (5-54)||(14906590-14906639)
chr2 (109-282)||(19689269-19689452)
chr2 (5-54)||(20015075-20015124)
chr2 (5-54)||(23820135-23820184)
chr2 (109-161)||(14906439-14906491)
chr2 (109-161)||(23820283-23820335)
chr2 (204-279)||(9652753-9652828)
chr2 (50-99)||(24996332-24996381)
chr2 (205-286)||(32466177-32466257)
chr2 (216-316)||(17396487-17396587)
chr2 (113-161)||(20015227-20015275)
chr2 (118-161)||(17396652-17396695)
chr2 (204-278)||(33128372-33128446)
chr2 (204-318)||(21273866-21273980)
chr2 (204-237)||(7507756-7507789)
chr2 (219-304)||(11231188-11231272)
chr2 (219-304)||(22513035-22513119)
chr2 (219-304)||(24685631-24685715)
chr2 (204-277)||(24826573-24826646)
chr2 (204-237)||(28031133-28031166)
chr2 (219-304)||(28775657-28775741)
chr2 (170-237)||(31146072-31146138)
chr2 (204-256)||(17204659-17204711)
[»] scaffold0077 (1 HSPs)
scaffold0077 (109-248)||(36825-36964)
[»] scaffold0162 (4 HSPs)
scaffold0162 (109-290)||(26286-26466)
scaffold0162 (204-291)||(12063-12150)
scaffold0162 (109-161)||(8179-8231)
scaffold0162 (204-277)||(8051-8125)
[»] scaffold0011 (1 HSPs)
scaffold0011 (109-291)||(123032-123215)
[»] chr8 (35 HSPs)
chr8 (109-304)||(43373322-43373519)
chr8 (109-236)||(16404900-16405026)
chr8 (204-318)||(17345887-17346001)
chr8 (219-318)||(13662100-13662199)
chr8 (219-318)||(13720763-13720862)
chr8 (109-290)||(24928662-24928842)
chr8 (219-318)||(22006093-22006192)
chr8 (109-290)||(16193589-16193767)
chr8 (221-318)||(16195555-16195652)
chr8 (219-286)||(16872918-16872985)
chr8 (1-54)||(5238147-5238200)
chr8 (109-286)||(22907078-22907265)
chr8 (1-54)||(24661398-24661451)
chr8 (1-54)||(43685606-43685659)
chr8 (204-291)||(41506654-41506741)
chr8 (205-291)||(7000465-7000551)
chr8 (1-51)||(22907535-22907585)
chr8 (204-304)||(24385582-24385684)
chr8 (204-282)||(5238404-5238482)
chr8 (204-282)||(24661116-24661194)
chr8 (204-282)||(43685863-43685941)
chr8 (109-161)||(5238299-5238351)
chr8 (219-279)||(16674265-16674324)
chr8 (109-161)||(24661247-24661299)
chr8 (109-161)||(43685758-43685810)
chr8 (204-278)||(21494314-21494388)
chr8 (204-304)||(22088644-22088743)
chr8 (204-278)||(3431134-3431208)
chr8 (204-278)||(22886654-22886728)
chr8 (219-304)||(271210-271294)
chr8 (219-304)||(644626-644710)
chr8 (219-304)||(830361-830445)
chr8 (204-237)||(2545265-2545298)
chr8 (219-304)||(15319009-15319093)
chr8 (219-304)||(15499378-15499462)
[»] scaffold0195 (2 HSPs)
scaffold0195 (109-233)||(19418-19543)
scaffold0195 (109-160)||(21502-21553)
[»] scaffold0018 (1 HSPs)
scaffold0018 (109-290)||(51054-51233)
[»] scaffold0001 (2 HSPs)
scaffold0001 (109-304)||(172117-172312)
scaffold0001 (109-304)||(177820-178015)
[»] scaffold0106 (1 HSPs)
scaffold0106 (109-281)||(41941-42111)
[»] scaffold0023 (5 HSPs)
scaffold0023 (109-237)||(48810-48936)
scaffold0023 (219-318)||(153842-153941)
scaffold0023 (204-237)||(61121-61154)
scaffold0023 (219-304)||(169759-169843)
scaffold0023 (221-277)||(36416-36472)
[»] scaffold0266 (2 HSPs)
scaffold0266 (109-304)||(3438-3633)
scaffold0266 (109-304)||(1336-1532)
[»] scaffold0761 (1 HSPs)
scaffold0761 (219-316)||(1412-1509)
[»] scaffold1500 (1 HSPs)
scaffold1500 (219-318)||(1349-1448)
[»] scaffold0008 (1 HSPs)
scaffold0008 (109-248)||(128083-128220)
[»] scaffold0218 (1 HSPs)
scaffold0218 (109-226)||(4996-5112)
[»] scaffold0025 (3 HSPs)
scaffold0025 (134-304)||(146838-147008)
scaffold0025 (109-291)||(9061-9247)
scaffold0025 (109-188)||(148933-149012)
[»] scaffold0302 (1 HSPs)
scaffold0302 (109-291)||(12325-12505)
[»] scaffold0529 (1 HSPs)
scaffold0529 (221-318)||(3285-3382)
[»] scaffold0383 (1 HSPs)
scaffold0383 (219-308)||(2715-2803)
[»] scaffold0009 (1 HSPs)
scaffold0009 (108-290)||(272236-272416)
[»] scaffold0498 (1 HSPs)
scaffold0498 (109-304)||(9090-9285)
[»] scaffold0032 (2 HSPs)
scaffold0032 (204-318)||(107993-108107)
scaffold0032 (204-281)||(55904-55981)
[»] scaffold0116 (1 HSPs)
scaffold0116 (219-304)||(353-438)
[»] scaffold0369 (1 HSPs)
scaffold0369 (219-307)||(4044-4132)
[»] scaffold0191 (1 HSPs)
scaffold0191 (219-318)||(7292-7390)
[»] scaffold0092 (1 HSPs)
scaffold0092 (219-318)||(10583-10682)
[»] scaffold0022 (1 HSPs)
scaffold0022 (219-308)||(5057-5146)
[»] scaffold1542 (1 HSPs)
scaffold1542 (109-175)||(519-585)
[»] scaffold0467 (1 HSPs)
scaffold0467 (118-304)||(10188-10373)
[»] scaffold0183 (1 HSPs)
scaffold0183 (219-279)||(6919-6979)
[»] scaffold0026 (3 HSPs)
scaffold0026 (219-279)||(64395-64455)
scaffold0026 (109-148)||(89860-89899)
scaffold0026 (109-154)||(107959-108004)
[»] scaffold0013 (1 HSPs)
scaffold0013 (219-279)||(154305-154365)
[»] scaffold0139 (2 HSPs)
scaffold0139 (219-304)||(13909-13993)
scaffold0139 (219-304)||(20963-21047)
[»] scaffold0367 (1 HSPs)
scaffold0367 (204-304)||(17142-17241)
[»] scaffold0772 (2 HSPs)
scaffold0772 (216-302)||(5858-5943)
scaffold0772 (109-161)||(5741-5793)
[»] scaffold0158 (1 HSPs)
scaffold0158 (205-281)||(25532-25608)
[»] scaffold0155 (1 HSPs)
scaffold0155 (219-279)||(23623-23683)
[»] scaffold0078 (3 HSPs)
scaffold0078 (204-286)||(36930-37012)
scaffold0078 (109-161)||(37065-37117)
scaffold0078 (1-47)||(37391-37437)
[»] scaffold0597 (1 HSPs)
scaffold0597 (204-279)||(835-910)
[»] scaffold0465 (1 HSPs)
scaffold0465 (204-279)||(9839-9914)
[»] scaffold0251 (1 HSPs)
scaffold0251 (204-318)||(13202-13317)
[»] scaffold0160 (1 HSPs)
scaffold0160 (205-279)||(339-413)
[»] scaffold0141 (6 HSPs)
scaffold0141 (204-282)||(22857-22935)
scaffold0141 (204-282)||(27112-27190)
scaffold0141 (5-54)||(22604-22653)
scaffold0141 (5-54)||(26859-26908)
scaffold0141 (109-161)||(27007-27059)
scaffold0141 (109-161)||(22752-22804)
[»] scaffold0125 (1 HSPs)
scaffold0125 (109-278)||(41860-42039)
[»] scaffold0124 (3 HSPs)
scaffold0124 (204-282)||(1450-1528)
scaffold0124 (5-54)||(1732-1781)
scaffold0124 (109-161)||(1581-1633)
[»] scaffold0066 (2 HSPs)
scaffold0066 (204-281)||(45338-45415)
scaffold0066 (204-281)||(54724-54801)
[»] scaffold0207 (1 HSPs)
scaffold0207 (193-256)||(18015-18078)
[»] scaffold0058 (1 HSPs)
scaffold0058 (204-318)||(57309-57424)
[»] scaffold0118 (1 HSPs)
scaffold0118 (204-278)||(34266-34340)
[»] scaffold0004 (1 HSPs)
scaffold0004 (204-290)||(193343-193429)
[»] scaffold1711 (1 HSPs)
scaffold1711 (219-279)||(1176-1236)
[»] scaffold0364 (1 HSPs)
scaffold0364 (278-318)||(17710-17750)
[»] scaffold0132 (2 HSPs)
scaffold0132 (204-256)||(13824-13876)
scaffold0132 (109-161)||(13718-13770)
[»] scaffold0049 (1 HSPs)
scaffold0049 (109-157)||(48399-48447)
[»] scaffold0706 (1 HSPs)
scaffold0706 (204-304)||(6373-6475)
[»] scaffold0234 (1 HSPs)
scaffold0234 (204-279)||(17261-17336)
[»] scaffold0303 (1 HSPs)
scaffold0303 (204-278)||(4304-4378)
[»] scaffold0173 (1 HSPs)
scaffold0173 (204-278)||(5549-5623)
[»] scaffold0084 (2 HSPs)
scaffold0084 (204-309)||(55939-56045)
scaffold0084 (122-157)||(56102-56137)
[»] scaffold0075 (1 HSPs)
scaffold0075 (109-161)||(34459-34511)
[»] scaffold0482 (1 HSPs)
scaffold0482 (50-88)||(7913-7951)
[»] scaffold0335 (1 HSPs)
scaffold0335 (204-278)||(5434-5508)
[»] scaffold0029 (1 HSPs)
scaffold0029 (204-278)||(49710-49784)
[»] scaffold0107 (1 HSPs)
scaffold0107 (219-304)||(31631-31715)
[»] scaffold0076 (1 HSPs)
scaffold0076 (219-304)||(39425-39509)
[»] scaffold0039 (1 HSPs)
scaffold0039 (204-281)||(12373-12450)
[»] scaffold0233 (1 HSPs)
scaffold0233 (50-82)||(23082-23114)


Alignment Details
Target: scaffold0028 (Bit Score: 190; Significance: 1e-103; HSPs: 4)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 50 - 291
Target Start/End: Complemental strand, 107894 - 107653
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcagtgtaacactcatacaaatatatcatcacagttggagcacgaatttaacaa 149  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||    
T  107894 acatgcgccacttgtactttttctttctattttatctccgatgtagtcagtataacactcatacaaatatatcatcacagttggagcacgaatttagcaa 107795  T
Q  150 caattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaac 249  Q
     ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||     
T  107794 aaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagataaagattaat 107695  T
Q  250 ccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    || ||||   ||||||||| | |||||||||| || ||||||    
T  107694 cccaacttaggcttcaatttaactcctaagctcactccaatt 107653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 89505 - 89323
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  89505 catacaaatatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatagaacatttgaaaatttacaaaatgatgatgat 89406  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||||||||||||||||||||||||||||| |||||||| || ||||   ||||||||| | |||||||||| || ||||||    
T  89405 catgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaatt 89323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 130880 - 130979
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| |||||||||||||||||||| || || |||||  || ||| |||||||||||||||||||| || | |||||||||||||||||||||    
T  130880 atgattatgataaagactaacccccttacctttgaagatgattatgcctaacccttgcttcaattcagctcct-aggtcaccccaattgattcctcaagc 130978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 99070 - 99108
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  99070 acatgctccacttgtactttttctttctattttgtctcc 99108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 139; Significance: 1e-72; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 109 - 318
Target Start/End: Complemental strand, 14842612 - 14842405
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||   | |||||||||||||||||| ||||| |||| ||| ||||||    
T  14842612 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatc--acaattcatacaacatttgagaatttgcaaagtgaagatgat 14842515  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
     ||||| ||||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  14842514 tatgataaagactaacccccttaccttagaagaagattaaccctaactcttgcttcaattcagctcctaagcttaccccaattgatccctcaagctattc 14842415  T
Q  309 ttttcaaaac 318  Q
    | ||||||||    
T  14842414 tcttcaaaac 14842405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 13839106 - 13839286
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaattt-acaaaatgatgatga 207  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||| ||| ||   |||||||||||||||||||||||||| |||||||||||||||    
T  13839106 catacaaacatatcatcacagttggagcacgaatttagcaacaattattcataatc--aaaattcatacaacatttgaaaatttcacaaaatgatgatga 13839203  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    | ||||||||||||||||||||||||||||||||||| ||| ||  |||   ||||||||| |||||||||||| || |||||    
T  13839204 ttatgatgaagactaacccccttaccttagatgaagagtaatccctacttaggcttcaatttagctcctaagctcactccaat 13839286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 23492696 - 23492810
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  23492696 atgattatgataaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccaaattgattcctcaagc 23492795  T
Q  304 tattcttttcaaaac 318  Q
    |||||| ||||||||    
T  23492796 tattctcttcaaaac 23492810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 118 - 236
Target Start/End: Original strand, 19232002 - 19232121
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaattt-acaaaatgatgatgatcatgatga 216  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| | ||| |    
T  19232002 atatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatgattaagataa 19232101  T
Q  217 agactaacccccttacctta 236  Q
    ||||||||||||||||||||    
T  19232102 agactaacccccttacctta 19232121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 2050022 - 2050217
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||| |||||||||||||||||||||| |||||||||||||| | |||||| || ||||||||||||||| || ||||||||||||||||    
T  2050022 catacaaacatatcgtcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttgatacaacatttgaaatttcacaaaatgatgatgat 2050119  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   ||||||||| ||||||||| || || ||||  ||||||| |||||||    
T  2050120 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaaactcactccaatcttgattcttcaagct 2050217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 5228619 - 5228733
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| |||||||  |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  5228619 atgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctcctaagcttaccccaattgattcctcaagc 5228718  T
Q  304 tattcttttcaaaac 318  Q
    |||||| ||||||||    
T  5228719 tattctcttcaaaac 5228733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 12030198 - 12030019
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||| | |||||||||||||||| || ||||||||||||||||    
T  12030198 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaaagt-catacaacatttgaaatttcacaaaatgatgatgat 12030101  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| | || ||||||||||||||||||| |||||||| || ||||   ||||||||| |||||||||||| || |||||    
T  12030100 tatgataatgattaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat 12030019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 18896978 - 18896879
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18896978 actaacccccttaccttggaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 18896879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 18911315 - 18911414
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  18911315 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 18911414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 15468274 - 15468175
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15468274 actaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 15468175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 118 - 248
Target Start/End: Complemental strand, 19260865 - 19260737
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaa 217  Q
    ||||||||| | || ||||||||||||| |||||||||||||| |   |||||||||||||||||||||||| |||||||||||||||||| ||||| ||    
T  19260865 atatcatcataattagagcacgaatttagcaacaattatccataaa--aaaaattcatacaacatttgaaaacttacaaaatgatgatgattatgataaa 19260768  T
Q  218 gactaacccccttaccttagatgaagattaa 248  Q
    |||||||||||||||||||||| ||||||||    
T  19260767 gactaacccccttaccttagataaagattaa 19260737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 110 - 236
Target Start/End: Complemental strand, 16744165 - 16744041
Alignment:
Q  110 atacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatc 209  Q
    ||||||| ||||||||| |||||||||||||||||||||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||     
T  16744165 atacaaacatatcatcaaagttggagcacgaatttaacaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgatt 16744068  T
Q  210 atgatgaagactaacccccttacctta 236  Q
    ||| | |||||||||| | ||||||||    
T  16744067 atggtaaagactaacctcgttacctta 16744041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 25059061 - 25059160
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||||| || | |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  25059061 actaacccccttacctttgaagaagattaaccctaatttttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 25059160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 199
Target Start/End: Complemental strand, 15859075 - 15858986
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaat 199  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  15859075 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacaattg-aaatttacaaaat 15858986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 54651764 - 54651879
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattcctcaag 302  Q
    ||||| ||||||||||| |||||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||| ||||||| ||||||| |||||    
T  54651764 atgattatgatgaagacaaacccccttaccttagatgatgattaacccaaacttttgcttcaattaagctcctaagctcaccccaatttgattcatcaag 54651863  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  54651864 ctcttctctccaaaac 54651879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 16821458 - 16821556
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||| |||||  ||||||||    
T  16821458 actaacccccttacctttgaagaagattaacacaaactcttgcttcaattcagctcct-agcttaccccaattgattcttcaagttattcccttcaaaac 16821556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 8268667 - 8268600
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8268667 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 8268600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 8275767 - 8275700
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8275767 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 8275700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 22275531 - 22275619
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
    ||||||||||||||||| || || ||||||||  |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  22275531 actaacccccttacctttgaagatgattaaccttaacttttgcttcaattcagctcct-agcttaccccaattgattcctcaagctattc 22275619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 11986112 - 11986025
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||   ||||||||| |||||||||||| |||||||||    
T  11986112 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaatt 11986025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 16744486 - 16744436
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaac 51  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  16744486 aaccacaatcataacatataatcatacactccatcataattcaacaacaac 16744436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 17912430 - 17912328
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || | |||  ||||||||| |||||||||||| || ||||  ||||||| ||||    
T  17912430 atgattatgataaagactaacccccttaccttagataaagattaatcccacctcaggcttcaatttagctcctaagctcactccaaccttgattcttcaa 17912331  T
Q  302 gct 304  Q
    |||    
T  17912330 gct 17912328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 38168237 - 38168312
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||   ||||||||| ||||||||||    
T  38168237 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 38168312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 160
Target Start/End: Complemental strand, 51158069 - 51158018
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccat 160  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  51158069 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 51158018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 53771365 - 53771480
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  53771365 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 53771464  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  53771465 ctcttctctccaaaac 53771480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 2449184 - 2449106
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  2449184 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 2449106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 2449437 - 2449388
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  2449437 acaatcataacatataatcataccctccatcataattcaacaacaacatg 2449388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 15615137 - 15615242
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||    ||||||||| ||||||||||||| ||| | | ||||| |||||     
T  15615137 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctttcccaattggattcttcaagt 15615236  T
Q  304 tattct 309  Q
    ||||||    
T  15615237 tattct 15615242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 2449289 - 2449237
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  2449289 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 2449237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 41270395 - 41270455
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||||||||||||||| || |||||||||||| ||  |||||||||||||||||||||||    
T  41270395 actaacccccttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaag 41270455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 16261777 - 16261892
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||  | ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  16261777 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 16261876  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  16261877 ctcttctctccaaaac 16261892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 33342204 - 33342279
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||| ||||||||||||||||||||| || ||||   ||||||||| ||||||||||    
T  33342204 atgattatgataaagactaaccctcttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 33342279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 286
Target Start/End: Complemental strand, 13954824 - 13954754
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||| ||||    
T  13954824 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcaccc 13954754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 14285289 - 14285363
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||   |||||| || |||||||||    
T  14285289 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 14285363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 286
Target Start/End: Original strand, 45861134 - 45861204
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||| ||||    
T  45861134 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctcaccc 45861204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 19690029 - 19689980
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    |||| |||||||||||||||||||||||||||||||||||  ||||||||    
T  19690029 acatacgccacttgtactttttctttctattttatctccggcgtagtcag 19689980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 17912533 - 17912482
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  17912533 catacaaacatatcatca-agttggagcacgaatttagcaacaattatccatt 17912482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 51961063 - 51961011
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||    
T  51961063 atgattatgatgaagactaacccccttaccttagataatgattaatccaaact 51961011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 55316539 - 55316599
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||||||| ||||||| || |||||||||||| ||  |||||||||||||||||||||||    
T  55316539 actaacccctttacctttgaagaagattaaccctaatccttgcttcaattcagctcctaag 55316599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 13954932 - 13954889
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  13954932 atatcatcaaagttggagcacgaatttagcaacaattatccatt 13954889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 13975764 - 13975721
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  13975764 atatcatcaaagttggagcacgaatttagcaacaattatccatt 13975721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 30153265 - 30153367
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| ||||| || |||||||||||||||||||||||||||||| || ||||    ||||  || |||||||||||| |||||||  ||||||| ||||    
T  30153265 atgattatgataaaaactaacccccttaccttagatgaagattaatcccaacttagacttctctttagctcctaagctcaccccaatcttgattcttcaa 30153364  T
Q  302 gct 304  Q
    |||    
T  30153365 gct 30153367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Original strand, 45861026 - 45861069
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  45861026 atatcatcaaagttggagcacgaatttagcaacaattatccatt 45861069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 12264726 - 12264641
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccc-aattgattcctcaagct 304  Q
    ||||||||||||||||| || || |||||| || |||  ||||||||||||||||||| || | ||||| |||||||||||||||||    
T  12264726 actaacccccttacctttgaagatgattaatcccaacctttgcttcaattcagctcct-aggtcaccccaaattgattcctcaagct 12264641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 19947026 - 19947078
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||||||    
T  19947026 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaact 19947078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 161
Target Start/End: Complemental strand, 11986204 - 11986165
Alignment:
Q  122 catcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||||| ||||||||||||||||||||||||| |||    
T  11986204 catcacagttagagcacgaatttaacaacaattatcaatt 11986165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 201 - 236
Target Start/End: Complemental strand, 15857198 - 15857163
Alignment:
Q  201 atgatgatcatgatgaagactaacccccttacctta 236  Q
    |||||||| |||||||||||||||||||||||||||    
T  15857198 atgatgattatgatgaagactaacccccttacctta 15857163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 28356329 - 28356367
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  28356329 acatgctccacttgtactttttctttctattttgtctcc 28356367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 1467673 - 1467589
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  1467673 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 1467589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 15936678 - 15936633
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaatt 154  Q
    |||||||| ||||||| ||||||||||||||||||||  |||||||    
T  15936678 catacaaacatatcattacagttggagcacgaatttagtaacaatt 15936633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 48983892 - 48983860
Alignment:
Q  57 ccacttgtactttttctttctattttatctccg 89  Q
    |||||||||||||||||||| ||||||||||||    
T  48983892 ccacttgtactttttctttcgattttatctccg 48983860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 134; Significance: 1e-69; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 13037065 - 13036884
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13037065 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 13036966  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||| |||||||||||||||||||||||||| |||||||| || ||||   ||||||||| ||||||||||||||| |||||    
T  13036965 tatggtgaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagcttactccaat 13036884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 11580790 - 11580607
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaa-ttcatacaacatttgaaaatttacaaaa-tgatgatg 206  Q
    |||||||| |||| ||||||||||||||||||||||| ||| |||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  11580790 catacaaacatattatcacagttggagcacgaatttagcaataattatccattatgcaaaaaattcatacaacatttgaaaatttacaaaaatgatgatg 11580691  T
Q  207 atcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    || ||||| |||||||| ||||||||||||||| |||||||| || ||||   ||||||||| |||||||||||| || |||||    
T  11580690 attatgataaagactaatccccttaccttagattaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat 11580607  T

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Target: chr7; HSP #3
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 16211978 - 16212157
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||| ||||| | |||||| |||||||||||||||||| || ||||||||||||||||    
T  16211978 catacaaacatatcatcacagttggagcacgaatttagcaacaattgtccataa-gcaaaa-ttcatacaacatttgaaatttcacaaaatgatgatgat 16212075  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| ||||||||||||||||||||||||||||||||| || ||||   ||||||||| |||||||||||| || |||||    
T  16212076 tatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat 16212157  T

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Target: chr7; HSP #4
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 36052876 - 36053073
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||  ||||||||||||||||| |  |||||| ||||||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  36052876 catacaaacgtatcatcacagttggagtataaatttagcaacaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgat 36052975  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  36052976 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 36053073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 171 - 318
Target Start/End: Complemental strand, 15760096 - 15759949
Alignment:
Q  171 ttcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattca 270  Q
    ||||||||||||  ||||||  | ||| |||  ||||| |||||||  |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  15760096 ttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactcttgcttcaattca 15759997  T
Q  271 gctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15759996 gctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 15759949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 109 - 235
Target Start/End: Original strand, 3060178 - 3060302
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||||| |||||| |||||||||||||||||||||||||||||||    
T  3060178 catacaaatatattatcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatataacatttgaaaatttacaaaatgatgatgat 3060275  T
Q  209 catgatgaagactaacccccttacctt 235  Q
     ||||| |||||| |||||||||||||    
T  3060276 tatgataaagacttacccccttacctt 3060302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 171 - 318
Target Start/End: Complemental strand, 14250880 - 14250734
Alignment:
Q  171 ttcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattca 270  Q
    ||||||||||||  ||||||  | |||||||  ||||| | |||||  |||||||||||||||||||| |||||| ||| ||||||||||||||||||||    
T  14250880 ttcatacaacatgagaaaatgcaaaaaatgaacatgattacgatgataactaacccccttaccttagaagaagat-aactcaaactcttgcttcaattca 14250782  T
Q  271 gctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||    
T  14250781 gctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 14250734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 219 - 307
Target Start/End: Complemental strand, 15950725 - 15950638
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctatt 307  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  15950725 actaacccccttacctttgaagaagattaacccaaactcttgcttcaattcagctcct-agcttaccccaattgattcctcaagctatt 15950638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 13758692 - 13758759
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  13758692 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 13758759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 109 - 309
Target Start/End: Original strand, 13321228 - 13321440
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcca-ttatgcaa--------aaattcatacaacatttgaaaatttacaa--a 197  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||||||||||| |||| |||        | ||||||||||||  ||| || || |||  |    
T  13321228 catacaaacataacatcacagttagagcacgaatttagcaacaattatccacttattcaattcaacccatattcatacaacaaatgagaaattgcaataa 13321327  T
Q  198 atgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattc 296  Q
    ||||  ||||| |||||||||||||||||||||||||||||| | |||||| ||||||    |||||| || |||||||||||||||||||| |||||||    
T  13321328 atgaacatgattatgatgaagactaacccccttaccttagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaatttgattc 13321427  T
Q  297 ctcaagctattct 309  Q
     ||||||| ||||    
T  13321428 ttcaagctcttct 13321440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 13572996 - 13573056
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  13572996 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 13573056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 15927890 - 15927950
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15927890 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15927950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 18979955 - 18979895
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18979955 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 18979895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 128 - 291
Target Start/End: Original strand, 36024372 - 36024540
Alignment:
Q  128 agttggagcacgaatttaacaacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaa----tgatgatgatcatgatgaagacta 222  Q
    ||||||||||||||||||  |||||||||||| ||||| |||||||||||| ||||||||||| ||  ||||    |||||||||| |||||||||||||    
T  36024372 agttggagcacgaatttagaaacaattatccaattatg-aaaaattcataccacatttgaaaaattgtaaaaatgatgatgatgattatgatgaagacta 36024470  T
Q  223 a-cccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    | |||||||||||||||| | ||||||||  ||||   |||||| || ||||| |||||| || ||||||    
T  36024471 accccccttaccttagattatgattaacctcaacttaggcttcactttagctcataagctcactccaatt 36024540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 15516793 - 15516691
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| ||||| ||||||||||||||||| || || || ||||||||| |||||||||||||||||||||||||  ||||||||||  ||||||| ||||    
T  15516793 atgattatgataaagactaacccccttacatttgaagatgattaaccctaactcttgcttcaattcagctcctagacttaccccaatcttgattcttcaa 15516694  T
Q  302 gct 304  Q
    |||    
T  15516693 gct 15516691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 109 - 316
Target Start/End: Complemental strand, 25292389 - 25292173
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aa 198  Q
    |||||||| ||||||||| ||||||||||| |||||| ||||||||||||||| || ||    ||   | |||||||||   ||||||| || |||  ||    
T  25292389 catacaaacatatcatcaaagttggagcacaaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcttgaaaaattgcaaagaa 25292290  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcct 298  Q
    |||   |||| ||||| |||||||||||||||| |||||||||||||||  ||||||    ||||||||| |||||||||||||| ||||||||||||||    
T  25292289 tgaacttgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagctta-cccaattgattcct 25292191  T
Q  299 caagctattcttttcaaa 316  Q
    |||| | |||| ||||||    
T  25292190 caagttcttctcttcaaa 25292173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 286
Target Start/End: Original strand, 7293228 - 7293415
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaaa--a 198  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||| || ||    ||   | |||||||||    |||||| || ||||  |    
T  7293228 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaa 7293327  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||  ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||||||    
T  7293328 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccc 7293415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15441767 - 15441714
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  15441767 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 15441714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 30262332 - 30262279
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30262332 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 30262279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 147 - 291
Target Start/End: Original strand, 15709408 - 15709556
Alignment:
Q  147 caacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaat----gatgatgatcatgatgaagactaacccccttaccttagatga 241  Q
    ||||||||||||| ||||| |||||||||||| ||||||||||| || ||||||    ||||||||| |||||||||||||| || |||||||||||| |    
T  15709408 caacaattatccaattatg-aaaaattcataccacatttgaaaaattgcaaaattgatgatgatgattatgatgaagactaatcctcttaccttagatta 15709506  T
Q  242 agattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     ||||||||  ||||   |||||| || |||||||||||| || ||||||    
T  15709507 tgattaacctcaacttaggcttcactttagctcctaagctcactccaatt 15709556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 11516287 - 11516340
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||    
T  11516287 aaccacaatcataacatatactcatacactccatcataattcaacaacaacatg 11516340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 30262180 - 30261997
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaaa--a 198  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||| || ||    ||   | |||||||||    |||||| || ||||  |    
T  30262180 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaa 30262081  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    |||  ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  30262080 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 30261997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 316
Target Start/End: Complemental strand, 14113935 - 14113823
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||| |||||||||||| | | ||||| |||||     
T  14113935 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagt 14113836  T
Q  304 tattcttttcaaa 316  Q
    | |||| ||||||    
T  14113835 tcttctcttcaaa 14113823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 234
Target Start/End: Complemental strand, 295990 - 295893
Alignment:
Q  136 cacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttacct 234  Q
    |||||||||| |||||||||| |||||||||||| |||||||||  |||||||||  | ||||||||||  || ||| ||||||| |||||||||||||    
T  295990 cacgaatttagcaacaattattcattatgcaaaatttcatacaaagtttgaaaatgca-aaaatgatgagaattatgttgaagacaaacccccttacct 295893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 7292908 - 7292958
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaac 51  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||||||    
T  7292908 aaccacaatcacaacatataatcatacactccatcataattcaacaacaac 7292958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 11516544 - 11516622
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  11516544 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 11516622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 15441510 - 15441432
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  15441510 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 15441432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 256
Target Start/End: Complemental strand, 47481082 - 47480924
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt------atgcaa---aaattcatacaacatttgaaaatttacaa--a 197  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||      || |||   | ||||||||||||  ||| || || |||  |    
T  47481082 catacaaacataacatcacagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataa 47480983  T
Q  198 atgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||  ||||| |||||||||||||||||||||||||||||| | |||||| |||||||    
T  47480982 atgaatatgattatgatgaagactaacccccttaccttagataatgattaatccaaact 47480924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 611964 - 611915
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  611964 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 611915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 2437778 - 2437862
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || || |||||  || ||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  2437778 actaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcct-aggtcaccccaattgattcctcaagct 2437862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 11516439 - 11516491
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  11516439 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 11516491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 14423574 - 14423474
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaa 315  Q
    ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||| |||||||||||| | | ||||| ||||| | |||| |||||    
T  14423574 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagcttctaagcttacccaattggattcttcaagttcttctcttcaa 14423475  T
Q  316 a 316  Q
    |    
T  14423474 a 14423474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 15441615 - 15441563
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  15441615 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 15441563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 25124450 - 25124552
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| | |||||   |||||| || |||||||||||| || ||||  ||||||| ||||    
T  25124450 atgattatgatgaagactaacccccttaccttagataatgattaatctaaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaa 25124549  T
Q  302 gct 304  Q
    |||    
T  25124550 gct 25124552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 42056220 - 42056105
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||| ||||||    
T  42056220 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattactcaag 42056121  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  42056120 ctcttctctccaaaac 42056105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 14114032 - 14113988
Alignment:
Q  117 tatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  14114032 tatatcatcaaagttggagcacgaatttagcaacaattatccatt 14113988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 14423682 - 14423638
Alignment:
Q  117 tatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||||| |||||||||||||||||| |||||||||||||||    
T  14423682 tatatcatcaaagttggagcacgaatttagcaacaattatccatt 14423638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 2029244 - 2029319
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| |||||||||||||||||||||||| ||||||||  | ||||   ||||||||| ||||||||||    
T  2029244 atgattatgataaagactaacccccttaccttagataaagattaattccaacttaggcttcaatttagctcctaag 2029319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 50 - 100
Target Start/End: Complemental strand, 13934806 - 13934756
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcagt 100  Q
    ||||| |||||| |||||||||||||||||||||||||||  |||||||||    
T  13934806 acatgtgccactcgtactttttctttctattttatctccggcgtagtcagt 13934756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 7823050 - 7823134
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  7823050 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 7823134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 7830361 - 7830445
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  7830361 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 7830445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 27176755 - 27176839
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  27176755 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 27176839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 2190117 - 2190002
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| || ||||||| ||||||||||||| |||||||| || ||||   |||||| || | |||||||||| |||| |  |||||||||||||    
T  2190117 atgattatgataaaaactaaccgccttaccttagataaagattaatcccaacttaggcttcactttaactcctaagctcacccaatcttgattcctcaag 2190018  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  2190017 ctcttctctccaaaac 2190002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 3049905 - 3049980
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| || ||||||||||||||||||||| |||||||| || ||||   ||||||||| ||||| ||||    
T  3049905 atgattatgataaaaactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcttaag 3049980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 371417 - 371450
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  371417 atgattatgatgaagactaacccccttaccttag 371450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Complemental strand, 18253886 - 18253841
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaatt 154  Q
    |||||||| ||||||| ||||||||||||||||||||  |||||||    
T  18253886 catacaaacatatcattacagttggagcacgaatttagtaacaatt 18253841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 27101571 - 27101487
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  27101571 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 27101487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 27108919 - 27108835
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  27108919 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 27108835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 38783663 - 38783579
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  38783663 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 38783579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 241
Target Start/End: Complemental strand, 10000318 - 10000282
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatga 241  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  10000318 tgattatgatgaagacaaacccccttaccttagatga 10000282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 6e-68; HSPs: 44)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 13246642 - 13246824
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13246642 catacaaacatatcatcacagttgtagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 13246741  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   ||||||||| |||||||||||| || ||||||    
T  13246742 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatt 13246824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 54118295 - 54118168
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  54118295 catacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaataatgatgat 54118196  T
Q  209 catgatgaagactaacccccttacctta 236  Q
     |||||||||||||||||||||||||||    
T  54118195 tatgatgaagactaacccccttacctta 54118168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 122101 - 122296
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||||||||||||| |||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  122101 catacaaacatatcatcacagttggagcacaaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgat 122198  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||| ||||||||||||||| |||||||| || ||||    |||||||| ||||| |||||| || ||||  ||||||| |||||||    
T  122199 tatgataaagactaatccccttaccttagataaagattaatcccaacttagacttcaatttagctcttaagctcactccaatcttgattcttcaagct 122296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 15675140 - 15674954
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaa----tgatg 203  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| || |||||    |||||    
T  15675140 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaattgcaaaaatgatgatg 15675042  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||  ||||   |||||| || |||||||||||| || ||||||    
T  15675041 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaatt 15674954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 7131999 - 7131900
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  7131999 actaacccccttaccttagaagaagattaatccaaactcttgcttcaattcagctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 7131900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 14996460 - 14996559
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  14996460 actaacccccttaccttaaaagaagattaacccaaactcttgcttcaattcagctcctaaacttaccccaattgattcctcaagctattctcttcaaaac 14996559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 17145591 - 17145492
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| |||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17145591 actaacccccttaccttagaagaagattaacacaaactcttacttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 17145492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 250
Target Start/End: Original strand, 33240912 - 33241057
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcc-attatgcaaaaattcatacaacatttgaaaatttacaaa----atgatg 203  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||| || ||||    ||||||    
T  33240912 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaattgcaaaaatgatgatg 33241010  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacc 250  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||    
T  33241011 atgattatgatgaagactaacccccttaccttagattatgattaacc 33241057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 10104301 - 10104115
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaa----tgatg 203  Q
    |||||||| |||||||||||||||||||||| ||||| ||||||||||||| ||||| |||||||||||| ||||||||||| ||  ||||    |||||    
T  10104301 catacaaacatatcatcacagttggagcacggatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaattgtaaaaatgatgatg 10104203  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||  ||||   |||| | || |||||||||||| || ||||||    
T  10104202 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggctttactttagctcctaagctcactccaatt 10104115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 47357973 - 47358071
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||| |||| | ||||||    
T  47357973 actaacccccttaccttagaagaagattaacccaa-ctcttgcttcaattcagctcctaagcttaccccaattgattccttaagctcttctctccaaaac 47358071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 18169292 - 18169389
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||    
T  18169292 actaacccccttacctt-gaagaagattaaccctaattcttgcttcaattcagctccta-gcttaccccaattgattcctcaagctattctcttcaaaac 18169389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 126 - 291
Target Start/End: Original strand, 31132543 - 31132712
Alignment:
Q  126 acagttggagcacgaatttaacaacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaa----tgatgatgatcatgatgaagac 220  Q
    |||||||||||||||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| || |||||    ||||||| || |||||||||||    
T  31132543 acagttggagcacgaatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaattgcaaaaatgatgatgataattatgatgaagac 31132641  T
Q  221 taacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||||||||||||||||| | ||||||||  ||||   ||| || || |||||||||||| || ||||||    
T  31132642 taacccccttaccttagattatgattaacctcaacttaggctccactttagctcctaagctcactccaatt 31132712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 14952085 - 14952160
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  14952085 atgattatgataaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 14952160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 20001045 - 20001112
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  20001045 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 20001112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 26339341 - 26339408
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  26339341 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 26339408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 15287179 - 15287119
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15287179 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15287119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 15294288 - 15294228
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  15294288 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 15294228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 22351998 - 22351938
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22351998 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 22351938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 26680092 - 26680142
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaac 51  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  26680092 aaccacaatcataacatataatcatacactccatcataattcaacaacaac 26680142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 286
Target Start/End: Original strand, 26680517 - 26680599
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||||||    
T  26680517 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccc 26680599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 205 - 286
Target Start/End: Complemental strand, 55376525 - 55376444
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||| |||||||||||||||||||||||||||||| | ||| ||||||||||   ||||||||| |||||||||||| ||||    
T  55376525 tgattatgatgaagactaacccccttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcaccc 55376444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 15135939 - 15135824
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  15135939 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 15135840  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  15135839 ctcttctctccaaaac 15135824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 15272243 - 15272128
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  15272243 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 15272144  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  15272143 ctcttctctccaaaac 15272128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 16609045 - 16608967
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  16609045 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 16608967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 117381 - 117332
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  117381 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 117332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 10488626 - 10488675
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  10488626 acaatcataacatataatcataccctccatcataattcaacaacaacatg 10488675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 16328125 - 16328076
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  16328125 acaatcataacatataatcataccctccatcataattcaacaacaacatg 16328076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 10488774 - 10488826
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  10488774 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 10488826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 16327977 - 16327925
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  16327977 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 16327925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 26680412 - 26680464
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  26680412 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 26680464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 16327872 - 16327794
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||    ||||||||| |||||||||||||    
T  16327872 atgattatgataaagactaacccccttaccttatatgaagattaggccaaacctaggcttcaatttagctcctaagctt 16327794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 14912629 - 14912580
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||| ||  ||||||||    
T  14912629 acatgcgccacttgtactttttctttctattttatcttcgtcgtagtcag 14912580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 211 - 286
Target Start/End: Complemental strand, 13048160 - 13048085
Alignment:
Q  211 tgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||| |||||||||||||||| |||||||||||||||  ||||||    ||||||||| | |||||||||||||||    
T  13048160 tgataaagactaacccccttaacttagatgaagattagaccaaacctaggcttcaatttaactcctaagcttaccc 13048085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 176
Target Start/End: Original strand, 7850233 - 7850279
Alignment:
Q  130 ttggagcacgaatttaacaacaattatccattatgcaaaaattcata 176  Q
    ||||||||||||||||||| ||||||| |||||| ||||||||||||    
T  7850233 ttggagcacgaatttaacagcaattatgcattatacaaaaattcata 7850279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 32460635 - 32460561
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||| |||||||   |||||| || |||||||||    
T  32460635 atgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 32460561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 14500144 - 14500092
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| ||||||||| |||||||||||||||||||| | |||||| |||||||    
T  14500144 atgattatgatgaagcctaacccccttaccttagataatgattaatccaaact 14500092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 10488891 - 10488957
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| |||| |||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  10488891 aagaccaaccaccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 10488957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 26817510 - 26817472
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  26817510 acatgctccacttgtactttttctttctattttgtctcc 26817472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Original strand, 54694556 - 54694594
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  54694556 acatgctccacttgtactttttctttctattttgtctcc 54694594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 8045272 - 8045305
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  8045272 atgattatgatgaagactaacccccttaccttag 8045305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 16523146 - 16523179
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  16523146 atgattatgatgaagactaacccccttaccttag 16523179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 40885491 - 40885418
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
    ||||| ||||||||  |||||||||||||||||||| | |||||| |||||||   |||||| || ||||||||    
T  40885491 atgattatgatgaattctaacccccttaccttagataatgattaatccaaacttaggcttcactttagctccta 40885418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 13048272 - 13048220
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| |||||||   |||||||||| ||||||| |||||||||||||||    
T  13048272 catacaaacatatcattgaagttggagcatgaatttagcaacaattatccatt 13048220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 205 - 241
Target Start/End: Original strand, 22738577 - 22738613
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatga 241  Q
    |||| ||||||||||| ||||||||||||||||||||    
T  22738577 tgattatgatgaagacaaacccccttaccttagatga 22738613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 130; Significance: 2e-67; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 109 - 317
Target Start/End: Complemental strand, 1007 - 801
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||   | |||||||||||||||||| |||||  ||| ||| ||||||    
T  1007 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatc--acaattcatacaacatttgagaatttgtaaagtgaagatgat 910  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
     ||||| ||||||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  909 tatgataaagactaacccccttaccttagaagaagattaaccccaactcttgattcaattcagctcctaagcttaccccaattgattcctcaagctattc 810  T
Q  309 ttttcaaaa 317  Q
      |||||||    
T  809 ccttcaaaa 801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 127; Significance: 1e-65; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 23153659 - 23153841
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23153659 catacaaacatatcatcacagttggagcacgaatttagaaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 23153758  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     |||||||||||||||||||||||||||| | |||||||| || ||||   ||||||||| |||||||||||| || ||||||    
T  23153759 tatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatt 23153841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 113 - 318
Target Start/End: Complemental strand, 1657795 - 1657579
Alignment:
Q  113 caaatatatcatcacagttggagcacgaatttaacaacaattatccatt------atgcaa---aaattcatacaacatttgaaaatttacaa--aatga 201  Q
    |||| ||| |||||||||| ||||||||||||| |||||||||||||||      || |||   | ||||||||||||  ||| || || |||  |||||    
T  1657795 caaacataacatcacagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataaatga 1657696  T
Q  202 tgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaa 301  Q
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  1657695 acatgattatgatgaagactaacccccttaccttagaagaagattaacccaaactcttgtttcaattcagctcctaagcttaccccaattgattcctcaa 1657596  T
Q  302 gctattcttttcaaaac 318  Q
    |||||||| ||||||||    
T  1657595 gctattctcttcaaaac 1657579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 109 - 318
Target Start/End: Original strand, 15862683 - 15862903
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt------atgcaa---aaattcatacaacatttgaaaatttacaa--a 197  Q
    |||||||| ||| |||||||||| |||||||||||||  ||||||||||||||      || |||   | ||||||||||||  ||| || || |||  |    
T  15862683 catacaaacataacatcacagttagagcacgaatttagtaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataa 15862782  T
Q  198 atgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcc 297  Q
    ||||  ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  15862783 atgaacatgattatgatgaagactaacccccttaccttagaagaagattaacccaaactcttgcttcaattcacctcctaagcttaccccaattgattcc 15862882  T
Q  298 tcaagctattcttttcaaaac 318  Q
    |||||||||||| ||||||||    
T  15862883 tcaagctattctcttcaaaac 15862903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 148 - 291
Target Start/End: Original strand, 23148247 - 23148390
Alignment:
Q  148 aacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagatta 247  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | |||||||    
T  23148247 aacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgattatgatgaagactaacccccttaccttaggtaaagatta 23148346  T
Q  248 acccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    | || ||||   ||||||||| |||||||||||| || ||||||    
T  23148347 atcccaacttaggcttcaatttagctcctaagctcactccaatt 23148390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 171 - 318
Target Start/End: Original strand, 1556279 - 1556426
Alignment:
Q  171 ttcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattca 270  Q
    ||||||||||||  ||||||  | ||| |||  ||||| |||||||  |||||||||||||||||||| |||||||||| ||||||||||||||||||||    
T  1556279 ttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacacaaactcttgcttcaattca 1556378  T
Q  271 gctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  1556379 gctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 1556426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 19610340 - 19610439
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  19610340 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctcttctctccaaaac 19610439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 4991396 - 4991510
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaaccc-aaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||| || || |||||  || ||||||||||||||||||||||||||| |||||||||||| ||||||||||    
T  4991396 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctcctaatcttaccccaatt-attcctcaag 4991494  T
Q  303 ctattcttttcaaaac 318  Q
    ||||||| ||||||||    
T  4991495 ctattctcttcaaaac 4991510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 16232214 - 16232274
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16232214 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 16232274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 18086757 - 18086697
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  18086757 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 18086697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 23978091 - 23978158
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||| ||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23978091 actaacgcccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 23978158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 27751742 - 27751829
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| |||||||   ||||||||| |||||||||||| |||||||||    
T  27751742 atgattatgatgaagactaacccccttaccttagataaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaatt 27751829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 29869710 - 29869650
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||    
T  29869710 actaacccccttaccttagaagaagatcaacccaaactcttgcttcaattcagctcctaag 29869650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 264 - 318
Target Start/End: Original strand, 16240401 - 16240455
Alignment:
Q  264 caattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16240401 caattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 16240455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 23995247 - 23995362
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  23995247 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 23995346  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  23995347 ctcttctctccaaaac 23995362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 309
Target Start/End: Original strand, 29666181 - 29666287
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattcctcaag 302  Q
    ||||| ||||||||||||||||| ||||  |||||| | |||||| |||||||   ||||||||| |||||||||||| ||||||| ||||||| |||||    
T  29666181 atgattatgatgaagactaacccacttatgttagataatgattaatccaaacttaggcttcaatttagctcctaagctcaccccaatttgattcttcaag 29666280  T
Q  303 ctattct 309  Q
    || ||||    
T  29666281 ctcttct 29666287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 9000078 - 9000029
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  9000078 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 9000029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 9009243 - 9009194
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  9009243 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 9009194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 277
Target Start/End: Complemental strand, 14626169 - 14626003
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||| ||||||||   ||||||||||||| ||| |||||||||| ||   | |||||| ||||||||||| |||||  ||| ||| ||||||    
T  14626169 catacaaacataacatcacagcaagagcacgaatttagcaataattatccataatc--acaattcaaacaacatttgagaatttgtaaagtgaagatgat 14626072  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
      |||| |  ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||||    
T  14626071 tgtgataataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctccta 14626003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 1650053 - 1649975
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||    ||||||||| |||||||||||||    
T  1650053 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctt 1649975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 32276691 - 32276617
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||   |||||| || |||||||||    
T  32276691 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaagcttcactttagctcctaa 32276617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 274
Target Start/End: Complemental strand, 35009490 - 35009314
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt------atgcaa---aaattcatacaacatttgaaaatttacaa--a 197  Q
    ||||||||  || |||||||||| ||||||||||||| |||||||||||||||      || |||   | ||||||||||||  ||| || || |||  |    
T  35009490 catacaaacttaacatcacagttagagcacgaatttagcaacaattatccatttcttcaattcaacccatattcatacaacaaatgagaaattgcaataa 35009391  T
Q  198 atgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctc 274  Q
    ||||  ||||| ||||||||||||||||||||||| |||||| | |||||| ||||||| | |||||| || |||||    
T  35009390 atgaacatgattatgatgaagactaacccccttactttagataatgattaatccaaactttggcttcactttagctc 35009314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 16376307 - 16376223
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  16376307 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 16376223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 16383631 - 16383547
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  16383631 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 16383547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 22225672 - 22225588
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||||||||| |||||| || || |||||  || ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  22225672 actaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 22225588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 22251500 - 22251416
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||||||||| |||||| || || |||||  || ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  22251500 actaacccccatacctttgaagatgattattcctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 22251416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 18823315 - 18823263
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||||||    
T  18823315 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaact 18823263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Complemental strand, 18839170 - 18839118
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||||||    
T  18839170 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaact 18839118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 160
Target Start/End: Original strand, 29666099 - 29666137
Alignment:
Q  122 catcacagttggagcacgaatttaacaacaattatccat 160  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  29666099 catcacagctagagcacgaatttaacaacaattatccat 29666137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 10489021 - 10489105
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  10489021 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 10489105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 16556073 - 16555989
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  16556073 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 16555989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 16632629 - 16632545
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  16632629 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 16632545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 210 - 278
Target Start/End: Complemental strand, 15742146 - 15742078
Alignment:
Q  210 atgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  15742146 atgataaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 15742078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 127; Significance: 1e-65; HSPs: 51)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 27182598 - 27182416
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27182598 catacaaacatatcatcacagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 27182499  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     |||||||||||||||||||||||||||| | |||||||| || ||||   ||||||||| |||||||||||| || ||||||    
T  27182498 tatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatt 27182416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 171 - 318
Target Start/End: Original strand, 23514835 - 23514982
Alignment:
Q  171 ttcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattca 270  Q
    ||||||||||||  ||||||  | ||| |||  ||||| |||||||  |||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  23514835 ttcatacaacatgagaaaatgcaaaaattgaacatgattatgatgataactaacccccttaccttagaagaagattaacccaaactcttgcttcaattca 23514934  T
Q  271 gctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||||||||||||||| |||||| ||||||||    
T  23514935 gctcctaagcttaccccaattgattcctcaagttattctcttcaaaac 23514982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 18531118 - 18530933
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcc-attatgcaaaaattcatacaacatttgaaaatttacaaaatgatgat-- 205  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| ||| |||||||| ||||||||||| || ||||||||||||      
T  18531118 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatg-aaacattcataccacatttgaaaaattgcaaaatgatgatga 18531020  T
Q  206 -gatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     ||| |||||||||||||||||||||||||||||| | ||||||||  ||||   |||||| || |||||||||||| || ||||||    
T  18531019 cgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaatt 18530933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 35791032 - 35790933
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| | ||||||    
T  35791032 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctcttctctccaaaac 35790933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 250
Target Start/End: Complemental strand, 22053884 - 22053739
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcc-attatgcaaaaattcatacaacatttgaaaatttacaaa----atgatg 203  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||| |||||| |||||||||||| ||||||||||| || ||||    ||||||    
T  22053884 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaatttcaaaaatgatgatg 22053786  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacc 250  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||    
T  22053785 atgattatgatgaagactaacccccttaccttagattatgattaacc 22053739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 282
Target Start/End: Original strand, 23507177 - 23507348
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||  ||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||  ||||||||||  ||||||    
T  23507177 catacaaacatatcatcacaaatggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaatcttacaaaatggagatgat 23507274  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
     ||||| |||||||||||||||||||||||| ||||||||  | ||||  ||||||| || | |||||||||||    
T  23507275 tatgataaagactaacccccttaccttagataaagattaattccaacttatgcttcactttaactcctaagctt 23507348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 16105967 - 16106066
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| ||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  16105967 atgattatgataaagactaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctcct-agcttaccccaattgattcctcaagc 16106065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 17471522 - 17471434
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
    ||||||||||||||||| || || ||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  17471522 actaacccccttacctttgaagatgattaactcaaactcttgcttcaattcagctcct-agcttaccccaattgattcctcaagctattc 17471434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 7425646 - 7425743
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||  |  |||| ||||||||| ||||| |||||| ||||||    
T  7425646 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag--tcacccacttgattcctaaagctcttctttccaaaac 7425743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 1219454 - 1219387
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  1219454 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 1219387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 23328879 - 23328946
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23328879 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 23328946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 24616483 - 24616550
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24616483 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 24616550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 24712859 - 24712926
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24712859 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 24712926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 24745877 - 24745944
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  24745877 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 24745944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 27010161 - 27010221
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  27010161 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 27010221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 11211999 - 11211899
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagctattcttttcaaa 316  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||||| ||||||||||||  ||||||| |||||||||||  ||||||    
T  11211999 actaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcct-agcttaccccaattttgattcttcaagctattcccttcaaa 11211901  T
Q  317 ac 318  Q
    ||    
T  11211900 ac 11211899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 211 - 291
Target Start/End: Complemental strand, 23981430 - 23981350
Alignment:
Q  211 tgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||   ||||||||| |||||||||||| |||||||||    
T  23981430 tgatgaagactaacccccttacctaagatgaagattaatccaaacttaggcttcaatttagctcctaagctcaccccaatt 23981350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 210 - 291
Target Start/End: Original strand, 2032139 - 2032220
Alignment:
Q  210 atgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    |||||||| ||||||||||||||||||||| | ||||||||||||||   ||||||||| |||||||||||| |||||||||    
T  2032139 atgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagctcaccccaatt 2032220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 20623029 - 20623082
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  20623029 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 20623082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 21233731 - 21233678
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21233731 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 21233678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 204 - 304
Target Start/End: Original strand, 11343008 - 11343107
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| || ||||||||||||||||| || |||||||||||| |||   |||||||||||||||||| || | |||||| ||||||||||||||    
T  11343008 atgattatgataaaaactaacccccttacctttgaagaagattaaccctaacctctgcttcaattcagctcct-aggtcaccccacttgattcctcaagc 11343106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 32951018 - 32951118
Alignment:
Q  210 atgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattcctcaagctattc 308  Q
    ||||||||||||||||||||||||||| || | ||||||  ||||||    |||||||| |||||||||||||||||||| ||||||| ||||||| |||    
T  32951018 atgatgaagactaacccccttaccttaaataatgattaattcaaacttagacttcaatttagctcctaagcttaccccaatttgattcttcaagctcttc 32951117  T
Q  309 t 309  Q
    |    
T  32951118 t 32951118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 20623286 - 20623364
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  20623286 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 20623364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 21233474 - 21233396
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  21233474 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 21233396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 37053061 - 37053139
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  37053061 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 37053139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 723252 - 723301
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  723252 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 723301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 25900604 - 25900555
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  25900604 acaatcataacatataatcataccctccatcataattcaacaacaacatg 25900555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 37052804 - 37052857
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||| ||| ||||||| ||||||||||||||    
T  37052804 aaccacaatcataacatataatcataccctccatcataactcaacaacaacatg 37052857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 16536409 - 16536461
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  16536409 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 16536461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 20623181 - 20623233
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  20623181 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 20623233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 21233579 - 21233527
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  21233579 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 21233527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 37052956 - 37053008
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  37052956 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 37053008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 16536514 - 16536592
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| |||||||||||||||| |||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  16536514 atgattatgataaagactaacccccttatcttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 16536592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 25900352 - 25900274
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    |||| |||| |||||||||||||    
T  25900352 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctt 25900274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 108760 - 108683
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    ||||| |||||||||||||||||||||||||||||| |||||||| || ||||   |||||| || | ||||||||||    
T  108760 atgattatgatgaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttacctcctaagct 108683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 16536261 - 16536310
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    |||||||||||||| |||||||| ||| ||||||||||||||||||||||    
T  16536261 acaatcataacatacaatcataccctccatcataattcaacaacaacatg 16536310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 109 - 158
Target Start/End: Complemental strand, 25900457 - 25900408
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcc 158  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||    
T  25900457 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatcc 25900408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 290
Target Start/End: Original strand, 21651018 - 21651104
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    ||||| ||||| || | |||||||||||||||||||||||||||| || ||||    |||||||| |||||||||||| || |||||    
T  21651018 atgattatgataaatattaacccccttaccttagatgaagattaatcccaacttagacttcaatttagctcctaagctcactccaat 21651104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 10777904 - 10777820
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||| |||||||||||| || || ||||| ||  ||| |||||||||||||||||||| || | |||||| |||||||||||||||    
T  10777904 actaccccccttacctttgaagatgattatccttaacccttgcttcaattcagctcct-aggtcaccccacttgattcctcaagct 10777820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 21932315 - 21932231
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  21932315 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 21932231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 21938485 - 21938401
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||||||||||    
T  21938485 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattcctcaagct 21938401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 204 - 277
Target Start/End: Original strand, 25005137 - 25005210
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
    ||||| ||||||||||||||||||||||| |||||| | |||||| |||||||   |||||| || ||||||||    
T  25005137 atgattatgatgaagactaacccccttactttagataatgattaatccaaacttaggcttcactttagctccta 25005210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 7529228 - 7529280
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||| |||||||    
T  7529228 atgattatgaagaagactaacccccttaccttagataatgattaatccaaact 7529280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 34939489 - 34939541
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||| |||||||||| ||||||||||||| ||||| |||||||||    
T  34939489 catacaaacataacatcacagttagagcacgaatttagcaacagttatccatt 34939541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 157
Target Start/End: Original strand, 32950920 - 32950955
Alignment:
Q  122 catcacagttggagcacgaatttaacaacaattatc 157  Q
    |||||||||| |||||||||||||||||||||||||    
T  32950920 catcacagttagagcacgaatttaacaacaattatc 32950955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 24417836 - 24417798
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  24417836 acatgctccacttgtactttttctttctattttgtctcc 24417798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 9730310 - 9730277
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  9730310 atgattatgatgaagactaacccccttaccttag 9730277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 29188217 - 29188133
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||||| ||||||||| |||||    
T  29188217 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcaccccacttgattcctaaagct 29188133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 35582358 - 35582442
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  35582358 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 35582442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 36989704 - 36989620
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  36989704 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 36989620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 89
Target Start/End: Complemental strand, 5605791 - 5605759
Alignment:
Q  57 ccacttgtactttttctttctattttatctccg 89  Q
    |||||||||||||||||||| ||||||||||||    
T  5605791 ccacttgtactttttctttcgattttatctccg 5605759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 109 - 281
Target Start/End: Complemental strand, 247493 - 247321
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  247493 catacaaacatatcattacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 247394  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   ||||||||| ||||||||||||    
T  247393 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 247321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012; HSP #2
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 34107 - 33993
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  34107 atgattatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagcttacgccaattgattcctcaagc 34008  T
Q  304 tattcttttcaaaac 318  Q
    |||||| ||||||||    
T  34007 tattctcttcaaaac 33993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 109 - 314
Target Start/End: Complemental strand, 6115 - 5912
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| ||   | |||||||||||||||||| ||||| |||| |||  |||||    
T  6115 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataatc--acaattcatacaacatttgagaatttgcaaagtgaaaatgat 6018  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
     ||||| ||||||||||||||||||||||||  ||||||| || |||||||||||||||||||||||||||||||| | |||||||||||||||||||||    
T  6017 tatgataaagactaacccccttaccttagatagagattaatcctaactcttgcttcaattcagctcctaagcttactctaattgattcctcaagctattc 5918  T
Q  309 ttttca 314  Q
    | ||||    
T  5917 tcttca 5912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 119; Significance: 8e-61; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 20893677 - 20893496
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  20893677 catacaaacatatcatcacagttggagcaagaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaa-ttacaaaatgatgatgat 20893579  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     |||||||||||||||||||||||||||| | |||||||| || ||||   ||||||||| |||||||||||| || ||||||    
T  20893578 tatgatgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatt 20893496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 37844501 - 37844320
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  37844501 catacaaacatatcatcatagttggagcatgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgat 37844402  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| |||||||||||||||||||||||| || ||||| || ||||   ||||||||| |||||||||||| || |||||    
T  37844401 tatgataaagactaacccccttaccttagataaaaattaatcccaacttaggcttcaatttagctcctaagctcactccaat 37844320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 20445891 - 20446073
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaattt-acaaaatgatgatga 207  Q
    |||||||| ||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  20445891 catacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttcacaaaatgatgatga 20445990  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    | ||||| ||||||||| |||||||||||||| |||||||| || ||||   ||||||||| | |||||||||| || |||||    
T  20445991 ttatgataaagactaactcccttaccttagataaagattaatcccaacttaggcttcaatttaactcctaagctcactccaat 20446073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 20531656 - 20531837
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||| |||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  20531656 catacaaacatattatcacatttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgat 20531755  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| ||||||||   ||||||||||||| |||||||| || ||||   ||||||||| | |||||||||| || |||||    
T  20531756 tatgataaagactaatttccttaccttagataaagattaatcccaacttaggcttcaatttatctcctaagctcactccaat 20531837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 20913242 - 20913421
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||  || || ||||||||||||||| |||||||||| |||||||| ||||||    
T  20913242 catacaaacatatcatcacagttggagcacgaatttagcaacaattatcc-gtaagc-aaaattcatacaacaattgaaaatttgcaaaatgaggatgat 20913339  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     | ||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || |||||    
T  20913340 tacgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaat 20913421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 109 - 236
Target Start/End: Original strand, 41394434 - 41394559
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||| |||||| ||   ||||||||||||||||||||||||||||||||||||||||||    
T  41394434 catacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataatc--aaaattcatacaacatttgaaaatttacaaaatgatgatgat 41394531  T
Q  209 catgatgaagactaacccccttacctta 236  Q
     ||||| |||||||||||||||||||||    
T  41394532 tatgataaagactaacccccttacctta 41394559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 20931557 - 20931736
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||  ||||||||||| |||||||||| |||||||| ||||||    
T  20931557 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaac-ttcatacaacaattgaaaatttgcaaaatgaggatgat 20931654  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| ||| |||||||||||||||||||| |||||||| || ||||   |||||| || |||| ||||||| || |||||    
T  20931655 tatgataaaggctaacccccttaccttagataaagattaatcccaacttaggcttcactttagctgctaagctcactccaat 20931736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 204 - 308
Target Start/End: Complemental strand, 15861358 - 15861254
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| |||||||||||||||||||| || || ||||||||| |||||||||||||||||||||||||  |||| |||||||||||||||||||    
T  15861358 atgattatgataaagactaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctagacttatcccaattgattcctcaagc 15861259  T
Q  304 tattc 308  Q
    |||||    
T  15861258 tattc 15861254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 22035769 - 22035836
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  22035769 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 22035836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 22228130 - 22228229
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||| |||||  ||||||||    
T  22228130 actaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcttaagcttaccccaattgattcttcaagttattcccttcaaaac 22228229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 7640868 - 7640801
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  7640868 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 7640801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 22232827 - 22232926
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||| ||| ||||||||||||||||| ||||| |||||  ||||||||    
T  22232827 actaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcataaacttaccccaattgattcatcaagatattcacttcaaaac 22232926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 46523710 - 46523777
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| |||||||||||||||||||||||| |||| | |||||||||||||||    
T  46523710 actaacccccttaccttagaagaagattaacccaaactcttgctttaatttatctcctaagcttaccc 46523777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 18598908 - 18598849
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||    
T  18598908 actaacccccttaccttagaagaagattaaccc-aactcttgcttcaattcagctcctaag 18598849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 51452556 - 51452605
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  51452556 acaatcataacatataatcatacactccatcataattcaacaacaacatg 51452605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 18059692 - 18059608
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || || |||||  || ||| |||||||||||||||||||| || | ||||||||||||||||||||||    
T  18059692 actaacccccttacctttgaagatgattattcctaacccttgcttcaattcagctcct-aggtcaccccaattgattcctcaagct 18059608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 50 - 99
Target Start/End: Original strand, 24821810 - 24821859
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    ||||||||||||||||||||||||||||||||||||||||  ||||||||    
T  24821810 acatgcgccacttgtactttttctttctattttatctccggcgtagtcag 24821859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 45051726 - 45051804
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||    ||||||||| |||||||||||||    
T  45051726 atgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctt 45051804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 282
Target Start/End: Original strand, 51452821 - 51452887
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  51452821 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 51452887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 21756440 - 21756391
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    |||||||||||||||||| |||||||||||||||||||||  ||||||||    
T  21756440 acatgcgccacttgtactctttctttctattttatctccggcgtagtcag 21756391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 5072320 - 5072260
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||||||||||||||| || |||||||||||| ||   ||||||||||||||||||||||    
T  5072320 actaacccccttacctttgaagaagattaaccctaatctttgcttcaattcagctcctaag 5072260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 51452704 - 51452756
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| ||||| |||||||||||| |||||||||||||||    
T  51452704 catacaaacatatcatcaaagttgaagcacgaatttagcaacaattatccatt 51452756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 224 - 304
Target Start/End: Original strand, 17148895 - 17148974
Alignment:
Q  224 cccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||||||||||| || |  ||||| ||| ||| ||||||||||||||||||||| | | |||||| |||||||||||||||    
T  17148895 cccccttacctttgaagttgattatccccaacccttgcttcaattcagctcctatg-tcaccccacttgattcctcaagct 17148974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 17004960 - 17005044
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  17004960 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 17005044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 38055025 - 38054941
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  38055025 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 38054941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 236
Target Start/End: Original strand, 41218728 - 41218760
Alignment:
Q  204 atgatcatgatgaagactaacccccttacctta 236  Q
    |||||||||||||| ||||||||||||||||||    
T  41218728 atgatcatgatgaaaactaacccccttacctta 41218760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 118; Significance: 3e-60; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 109 - 290
Target Start/End: Original strand, 8891454 - 8891635
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8891454 catacaaacatattatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 8891553  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| |||||||||||| ||||||||||| |||||||| || ||||   ||||||||| || ||||||||| || |||||    
T  8891554 tatgataaagactaacccctttaccttagataaagattaatcccaacttaggcttcaatttagttcctaagctcactccaat 8891635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 109 - 281
Target Start/End: Original strand, 462950 - 463120
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  462950 catacaaatatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgat 463047  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   ||||||||| ||||||||||||    
T  463048 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcaatttagctcctaagct 463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 110 - 290
Target Start/End: Complemental strand, 36982491 - 36982310
Alignment:
Q  110 atacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttac-aaaatgatgatgat 208  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  36982491 atacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaatgatgatgat 36982392  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| |||||||||||||||||||||||| |||| |||  | ||||   ||||||||| ||||||| |||| || |||||    
T  36982391 tatgataaagactaacccccttaccttagataaagactaataccaacttaggcttcaatttagctcctcagctcactccaat 36982310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 104; E-Value: 8e-52
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 19794755 - 19794629
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||    
T  19794755 catacaaacatatcatcacagttggagcacgaatttaacgacaattatccattatgcaaaaattcatacaacatttg-aaatttacaaaataatgatgat 19794657  T
Q  209 catgatgaagactaacccccttacctta 236  Q
     |||||||||||||||||||||||||||    
T  19794656 tatgatgaagactaacccccttacctta 19794629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 138 - 290
Target Start/End: Original strand, 22863169 - 22863321
Alignment:
Q  138 cgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttag 237  Q
    |||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  22863169 cgaatttagcaacaattatccattatgcaaaaattcatacaacaattgaaaatttacaaaatgatgatgattatgataaagactaacccccttaccttag 22863268  T
Q  238 atgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    || |||||||| || ||||   ||| ||||| |||||||||||| ||||||||    
T  22863269 ataaagattaatcccaacttaggctgcaatttagctcctaagctcaccccaat 22863321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 16935915 - 16936014
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16935915 actaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 16936014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 17006575 - 17006674
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  17006575 actaacccccttaccttagaagaagattaacccaaactctttcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 17006674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 43643008 - 43642881
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||| ||||||||| |||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||    
T  43643008 catacaaacatatcatcacaattggagcacaaatttagcaacaattatccactatgcaaaaattcatacaacatttgaaaattcacaaaatgatgatgat 43642909  T
Q  209 catgatgaagactaacccccttacctta 236  Q
     ||||| |||||||||| |||| |||||    
T  43642908 tatgataaagactaacctccttccctta 43642881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 42177903 - 42177804
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| ||||||||    
T  42177903 actaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagcccctaatcttaccccaattgattcctcaagctattctcttcaaaac 42177804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 24341440 - 24341254
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcca-ttatgcaaaaattcatacaacatttgaaaatttacaaaa----tgatg 203  Q
    |||||||| ||||||||||||||| |||| ||||||| ||||||||||||| ||||| |||||||||||| ||||||||||| || |||||    |||||    
T  24341440 catacaaacatatcatcacagttgaagcatgaatttagcaacaattatccaattatg-aaaaattcataccacatttgaaaaattgcaaaaatgatgatg 24341342  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||||||||||| | ||||||||  ||||   |||||| || |||||||||||| || ||||||    
T  24341341 atgattatgatgaagactaacccccttaccttagattatgattaacctcaacttaggcttcattttagctcctaagctcactccaatt 24341254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 20627364 - 20627238
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaa-tttacaaaatgatgatga 207  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||| ||   | ||||||||||| ||||||||| ||||||||||||||||||    
T  20627364 catacaaacatatcatcacagttggagcacgaatttaacaacaattatccataat--cataattcatacaatatttgaaaattttacaaaatgatgatga 20627267  T
Q  208 tcatgatgaagactaacccccttacctta 236  Q
    | ||||| |||||||||||| ||||||||    
T  20627266 ttatgataaagactaaccccgttacctta 20627238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 12641576 - 12641509
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  12641576 actaacccccttaccttagatgaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 12641509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 8944168 - 8944235
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  8944168 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 8944235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 12635802 - 12635735
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12635802 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 12635735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 12728714 - 12728781
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  12728714 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 12728781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 23774458 - 23774525
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  23774458 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 23774525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 25213372 - 25213486
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaaccc-aaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||| || || |||||  || ||||||||||||||||||||||||||| |||||||||||| |||||||||     
T  25213372 atgattatgataaagactaacccccttacctttgaagatgattattcctaaactcttgcttcaattcagctcctaatcttaccccaatt-attcctcaat 25213470  T
Q  303 ctattcttttcaaaac 318  Q
    ||||||| ||||||||    
T  25213471 ctattctcttcaaaac 25213486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 219 - 286
Target Start/End: Original strand, 34824797 - 34824864
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||    
T  34824797 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcctaagcttaccc 34824864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 3798537 - 3798470
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||    
T  3798537 actaacccccttaccttagaagaagattaacccaaactcttgcttcaatttagctcataagcttaccc 3798470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 314
Target Start/End: Complemental strand, 25265441 - 25265224
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt------atgcaa---aaattcatacaacatttgaaaatttacaa--a 197  Q
    |||||||| ||| ||||| |||| ||||||||||||| |||||||||||||||      || |||   | ||||||||||||  ||| || || |||  |    
T  25265441 catacaaacataacatcaaagttagagcacgaatttagcaacaattatccatttattcaattcaacccatattcatacaacaaatgagaaattgcaataa 25265342  T
Q  198 atgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattc 296  Q
    ||||  ||||| ||||||||||||||||||||||| |||||| | |||||| ||||||    |||||| || |||||||||||||||||||| |||||||    
T  25265341 atgaacatgattatgatgaagactaacccccttacattagataatgattaatccaaacctaggcttcactttagctcctaagcttaccccaatttgattc 25265242  T
Q  297 ctcaagctattcttttca 314  Q
     ||||||| |||| ||||    
T  25265241 ttcaagctcttctcttca 25265224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 19689600 - 19689551
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  19689600 acaatcataacatataatcatacactccatcataattcaacaacaacatg 19689551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Original strand, 20015328 - 20015403
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||||||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| ||||||||||    
T  20015328 atgatcatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaag 20015403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 14906386 - 14906308
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  14906386 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 14906308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 23820388 - 23820466
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  23820388 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 23820466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 14906639 - 14906590
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  14906639 acaatcataacatataatcataccctccatcataattcaacaacaacatg 14906590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 109 - 282
Target Start/End: Complemental strand, 19689452 - 19689269
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaa--aa 198  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||| || ||    ||   | |||||||||    |||||| || |||  ||    
T  19689452 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaa 19689353  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    |||  ||||| ||||| ||||||||||||||||||||| ||||||||||  ||||||    ||||||||| |||||||||||||    
T  19689352 tgaacatgattatgataaagactaacccccttaccttaaatgaagattagaccaaacctaggcttcaatttagctcctaagctt 19689269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 20015075 - 20015124
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  20015075 acaatcataacatataatcataccctccatcataattcaacaacaacatg 20015124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 23820135 - 23820184
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  23820135 acaatcataacatataatcataccctccatcataattcaacaacaacatg 23820184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 14906491 - 14906439
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  14906491 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 14906439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 23820283 - 23820335
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  23820283 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 23820335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 9652828 - 9652753
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||   | ||||||| ||||||||||    
T  9652828 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggtttcaatttagctcctaag 9652753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 50 - 99
Target Start/End: Complemental strand, 24996381 - 24996332
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctccgatgtagtcag 99  Q
    |||||||||| |||||||||||||||||||||||||||||  ||||||||    
T  24996381 acatgcgccaattgtactttttctttctattttatctccggcgtagtcag 24996332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 205 - 286
Target Start/End: Original strand, 32466177 - 32466257
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||| |||||||||||||||||| ||||||||||| | ||| ||||||||||   ||||||||| |||||||||||| ||||    
T  32466177 tgattatgatgaagactaacccc-ttaccttagataaggatcaacccaaacttaggcttcaatttagctcctaagctcaccc 32466257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 216 - 316
Target Start/End: Complemental strand, 17396587 - 17396487
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaa 315  Q
    ||||||||||||||||||||||||||||||||  ||||||    |||| |||| |||||||||||| |||| | | ||||| ||||| | |||| |||||    
T  17396587 aagactaacccccttaccttagatgaagattagaccaaacctaggctttaatttagctcctaagctcacccaattggattcttcaagttcttctcttcaa 17396488  T
Q  316 a 316  Q
    |    
T  17396487 a 17396487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 20015227 - 20015275
Alignment:
Q  113 caaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  20015227 caaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 20015275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 17396695 - 17396652
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  17396695 atatcatcaaagttggagcacgaatttagcaacaattatccatt 17396652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 33128372 - 33128446
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  33128372 atgattatgatgaagactaacccccttaccttaggttatgattaatccaaacttaggcttcactttagctcctaa 33128446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 21273980 - 21273866
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||| ||||||||||| |||||||| || ||||   |||||| || ||||| |||||| |||| |  |||||||||||||    
T  21273980 atgattatgataaagactaacccc-ttaccttagataaagattaatcccaacttaggcttcactttagctcataagctcacccaatcttgattcctcaag 21273882  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  21273881 ctcttctctccaaaac 21273866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 7507789 - 7507756
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  7507789 atgattatgatgaagactaacccccttaccttag 7507756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 11231272 - 11231188
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  11231272 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 11231188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 22513119 - 22513035
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  22513119 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 22513035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 24685715 - 24685631
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  24685715 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 24685631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 24826646 - 24826573
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
    ||||| ||||||| |||||||||| ||||||| || |  ||||| | | ||| |||||||||||||||||||||    
T  24826646 atgattatgatgatgactaacccctttacctttgaagttgattatctctaacccttgcttcaattcagctccta 24826573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 28031166 - 28031133
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  28031166 atgattatgatgaagactaacccccttaccttag 28031133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 28775741 - 28775657
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  28775741 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 28775657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 170 - 237
Target Start/End: Complemental strand, 31146138 - 31146072
Alignment:
Q  170 attcatacaaca-tttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttaccttag 237  Q
    |||||||||||| |||||||||||||| ||  | |||||| ||||||||  ||||||||||||||||||    
T  31146138 attcatacaacaatttgaaaatttacacaa--aagatgattatgatgaattctaacccccttaccttag 31146072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 17204659 - 17204711
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| ||||||||||||||||||||||| |||| | | |||||| |||||||    
T  17204659 atgattatgatgaagactaacccccttactttaggttatgattaatccaaact 17204711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 112; Significance: 1e-56; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 109 - 248
Target Start/End: Complemental strand, 36964 - 36825
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||    
T  36964 catacaaacatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaatttcacaaaatgatgatgat 36865  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaa 248  Q
     ||||| ||||||||||||||||||||| || ||||||||    
T  36864 tatgataaagactaacccccttaccttaaataaagattaa 36825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162 (Bit Score: 110; Significance: 2e-55; HSPs: 4)
Name: scaffold0162
Description:

Target: scaffold0162; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 26466 - 26286
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  26466 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatacattatg-aaaaattcatacaacatttgaaaatttacaaaatgatcatgat 26368  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| ||||||||||||||||||||||||||||||||| || | ||   ||||||||| |||||||||||| || |||||    
T  26367 tatgataaagactaacccccttaccttagatgaagattaatcccatcttaggcttcaatttagctcctaagctcactccaat 26286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #2
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 204 - 291
Target Start/End: Original strand, 12063 - 12150
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||||||||||||||||| ||||||| | |||||| ||||||| | ||||||||| ||||||||||||||||||||||    
T  12063 atgattatgatgaagactaacccccttatcttagataatgattaatccaaactttggcttcaatttagctcctaagcttaccccaatt 12150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 8231 - 8179
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||| |||||||||| ||||||||||||| |||||||||||||||    
T  8231 catacaaacataacatcacagttagagcacgaatttagcaacaattatccatt 8179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0162; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 277
Target Start/End: Complemental strand, 8125 - 8051
Alignment:
Q  204 atgatcatgatgaagactaaccccc-ttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
    ||||| ||||||||||||||||||| ||||||||||| | |||||| |||||||   |||||| || ||||||||    
T  8125 atgattatgatgaagactaaccccccttaccttagataatgattaatccaaacttaggcttcattttagctccta 8051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 108; Significance: 3e-54; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 109 - 291
Target Start/End: Complemental strand, 123215 - 123032
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttac-aaaatgatgatga 207  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||    
T  123215 catacaaacatatcatcacaattggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgcaaatttacaaaaattatgatga 123116  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    | ||| |||||||||||||||||||||||| | |||||||| || ||||   ||||||||| |||||||||||| || ||||||    
T  123115 ttatggtgaagactaacccccttaccttaggtaaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatt 123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 103; Significance: 3e-51; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 109 - 304
Target Start/End: Complemental strand, 43373519 - 43373322
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||  ||||||||||||||||||||||||||| ||  ||||||||||||| |||||||||||||||||||||||| || ||||||||||||||||    
T  43373519 catacaaacgtatcatcacagttggagcacgaatttagcattaattatccattatacaaaaattcatacaacatttgaaatttcacaaaatgatgatgat 43373420  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  43373419 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 43373322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 109 - 236
Target Start/End: Complemental strand, 16405026 - 16404900
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||||||||||||||||||| |||| ||||||||    
T  16405026 catacaaacatatcatcacagttggagcacgaatttagcaataattatccatcatgcaaaaattcatacaacatttgaaaatttac-aaataatgatgat 16404928  T
Q  209 catgatgaagactaacccccttacctta 236  Q
     |||||||||||||||||||||||||||    
T  16404927 tatgatgaagactaacccccttacctta 16404900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 204 - 318
Target Start/End: Original strand, 17345887 - 17346001
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  17345887 atgattatgatgaagactaacccccttacctaagaagaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagt 17345986  T
Q  304 tattcttttcaaaac 318  Q
    |||||| | ||||||    
T  17345987 tattctctccaaaac 17346001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 13662199 - 13662100
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  13662199 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 13662100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 13720862 - 13720763
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  13720862 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 13720763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 24928842 - 24928662
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaattt-acaaaatgatgatga 207  Q
    |||||||| |||| ||||||||||||||||||||||| |||||||||||||| ||   |||||||||||||||||||||||||| ||||||||| |||||    
T  24928842 catacaaacatataatcacagttggagcacgaatttagcaacaattatccataat--caaaattcatacaacatttgaaaatttcacaaaatgacgatga 24928745  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    | ||||| |||||||||||| ||||||||||| |||||||| || ||||    |||||||| |||||||||||| || |||||    
T  24928744 ttatgataaagactaaccccattaccttagataaagattaatcccaacttagacttcaatttagctcctaagctcactccaat 24928662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 22006192 - 22006093
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  22006192 actaacccccttacctttgaagaagattaactcaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 22006093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 16193767 - 16193589
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||| |||||| | |||||| ||||||||| |||||||||||||| |||||||||||||    
T  16193767 catacaaacatatcatcatagttggagcacgaatttagcaacaatcatccataa-gcaaaa-ttcatacaatatttgaaaatttaccaaatgatgatgat 16193670  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| |||||||| ||||||||||||||| ||||| || || ||||   ||||||||| |||||||||||| || |||||    
T  16193669 tatgataaagactaa-ccccttaccttagataaagatgaatcccaacttaggcttcaatttagctcctaagctcactccaat 16193589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 16195555 - 16195652
Alignment:
Q  221 taacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||| ||||||||| |||||| ||||||||||||| ||||||||    
T  16195555 taacccccttaccttagaagatgattaacccaaactcttgcttcaattcaactcctaatcttaccccatttgatttctcaagctattctcttcaaaac 16195652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 219 - 286
Target Start/End: Complemental strand, 16872985 - 16872918
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||||||    
T  16872985 actaacccccttaccttagaagaagattaactcaaactcttgcttcaatttagctcctaagcttaccc 16872918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 5238147 - 5238200
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  5238147 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 5238200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 109 - 286
Target Start/End: Complemental strand, 22907265 - 22907078
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt-atgca----aa---aattcatacaacatttgaaaatttacaaa--a 198  Q
    |||||||| ||||||||| |||||||||||||||||| ||||||||||||||| || ||    ||   | |||||||||    |||||| || ||||  |    
T  22907265 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccattcattcatttcaacccatttcatacaaatcatgaaaaattgcaaagaa 22907166  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    |||  ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||||||    
T  22907165 tgaacatgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccc 22907078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 24661451 - 24661398
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  24661451 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 24661398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 43685606 - 43685659
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  43685606 aaccacaatcataacatataatcatacactccatcataattcaacaacaacatg 43685659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 204 - 291
Target Start/End: Complemental strand, 41506741 - 41506654
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| |||||||| ||||||||||||||||||||| | ||||||||||||||   ||||||||| ||||| |||||| |||||||||    
T  41506741 atgattatgatgaaaactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcttaagctcaccccaatt 41506654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 205 - 291
Target Start/End: Complemental strand, 7000551 - 7000465
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    |||| |||||||| |||||||||||||| |||||| | ||||||||||||||   ||||||||| |||||||||||| |||||||||    
T  7000551 tgattatgatgaaaactaacccccttactttagataaggattaacccaaacttaggcttcaatttagctcctaagctcaccccaatt 7000465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 22907585 - 22907535
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaacaac 51  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||    
T  22907585 aaccacaatcataacatataatcatacactccatcataattcaacaacaac 22907535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 24385684 - 24385582
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| ||||    
T  24385684 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaa 24385585  T
Q  302 gct 304  Q
    |||    
T  24385584 gct 24385582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 5238404 - 5238482
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  5238404 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 5238482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 24661194 - 24661116
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  24661194 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 24661116  T

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Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 43685863 - 43685941
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  43685863 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 43685941  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 5238299 - 5238351
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  5238299 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 5238351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 16674324 - 16674265
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||    
T  16674324 actaacccccttaccttagaagaagattaactc-aactcttgcttcaattcagctcataag 16674265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 24661299 - 24661247
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  24661299 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 24661247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 43685758 - 43685810
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  43685758 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 43685810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 21494388 - 21494314
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||| ||||||||||||||||||||||||| | |||||| |||||||   |||||| || |||||||||    
T  21494388 atgattatgaagaagactaacccccttaccttagataatgattaatccaaacttaggcttcactttagctcctaa 21494314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 22088743 - 22088644
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| |||||||  ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| |||||    
T  22088743 atgattatgatgataactaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagc 22088645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 3431208 - 3431134
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||| | | ||| || |||||||   |||||| || |||||||||    
T  3431208 atgattatgatgaagactaacccccttaccttaggttatgatcaatccaaacttgggcttcactttagctcctaa 3431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 22886654 - 22886728
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| ||||| |||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  22886654 atgattatgattaagactaacccccttaccttaggtaatgattaatccaaacttaagcttcactttagctcctaa 22886728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 271294 - 271210
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  271294 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 271210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 644626 - 644710
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  644626 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 644710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 830361 - 830445
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  830361 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 830445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Original strand, 2545265 - 2545298
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  2545265 atgattatgatgaagactaacccccttaccttag 2545298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 15319093 - 15319009
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  15319093 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 15319009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 15499462 - 15499378
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  15499462 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 15499378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195 (Bit Score: 102; Significance: 1e-50; HSPs: 2)
Name: scaffold0195
Description:

Target: scaffold0195; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 233
Target Start/End: Original strand, 19418 - 19543
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttac-aaaatgatgatga 207  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||    
T  19418 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaaattatgatga 19517  T
Q  208 tcatgatgaagactaacccccttacc 233  Q
    | ||||||||||||||||||||||||    
T  19518 ttatgatgaagactaacccccttacc 19543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0195; HSP #2
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 109 - 160
Target Start/End: Original strand, 21502 - 21553
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccat 160  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  21502 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccat 21553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 102; Significance: 1e-50; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 109 - 290
Target Start/End: Complemental strand, 51233 - 51054
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  51233 catacaaatatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgat 51136  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
     ||||| |||||||| | |||||||| |||| |||||||| || ||||   ||||||||| |||||||||||| || |||||    
T  51135 tatgataaagactaatctccttacctaagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaat 51054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 96; Significance: 5e-47; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 172117 - 172312
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| |||||||| ||   |||||| |||||||||||||||||||||||||||||||||||    
T  172117 catacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc--aaaatttatacaacatttgaaaatttacaaaatgatgatgat 172214  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  172215 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 172312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 177820 - 178015
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||| ||||| ||||| |||||||| ||   |||||| |||||||||||||||||||||||||||||||||||    
T  177820 catacaaacatatcatcacagttggagcacgtatttagcaacagttatccataatc--aaaatttatacaacatttgaaaatttacaaaatgatgatgat 177917  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  177918 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 178015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 93; Significance: 3e-45; HSPs: 1)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 281
Target Start/End: Original strand, 41941 - 42111
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  41941 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgat 42038  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
     ||||| ||||| |||||||||||||||||| || ||||| || ||||    |||||||| | ||||||||||    
T  42039 tatgataaagaccaacccccttaccttagataaatattaatcccaacttagacttcaatttacctcctaagct 42111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 93; Significance: 3e-45; HSPs: 5)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 109 - 237
Target Start/End: Original strand, 48810 - 48936
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||| | |||||| ||||||||||||||||||||||||||||||||||||||    
T  48810 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgat 48907  T
Q  209 catgatgaagactaacccccttaccttag 237  Q
     ||||| ||||||||||||||||||||||    
T  48908 tatgataaagactaacccccttaccttag 48936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 153941 - 153842
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  153941 actaacccccttaccttagaagaagattaactcaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaaac 153842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 237
Target Start/End: Complemental strand, 61154 - 61121
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttag 237  Q
    ||||| ||||||||||||||||||||||||||||    
T  61154 atgattatgatgaagactaacccccttaccttag 61121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 169843 - 169759
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||||||||||||| || || || ||||| | | ||| |||||||||||||||||| || | | |||||| |||||||||||||||    
T  169843 actaacccccttacttttgaagatgattatcactaacccttgcttcaattcagctcttatg-tcaccccacttgattcctcaagct 169759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 221 - 277
Target Start/End: Original strand, 36416 - 36472
Alignment:
Q  221 taacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctccta 277  Q
    ||||||||||||||| || |  ||||| ||| ||| |||||||||||||||||||||    
T  36416 taacccccttacctttgaagttgattatccctaacccttgcttcaattcagctccta 36472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266 (Bit Score: 92; Significance: 1e-44; HSPs: 2)
Name: scaffold0266
Description:

Target: scaffold0266; HSP #1
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 109 - 304
Target Start/End: Complemental strand, 3633 - 3438
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||||||||||||||||| ||||||||||| || ||   |||||||||||||| |||||||||||||||||||| ||||||    
T  3633 catacaaacatatcatcacagttggagcacgaatttagcaacaattatctataatc--aaaattcatacaacttttgaaaatttacaaaatgaagatgat 3536  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||  |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  3535 tatgacaaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 3438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0266; HSP #2
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 1336 - 1532
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaattt-acaaaatgatgatga 207  Q
    ||||| || ||||||||| |||||||||||||||||| |||||||||||||| |   ||||||||||||||||||||||||||| |||||||||||||||    
T  1336 catactaacatatcatcaaagttggagcacgaatttagcaacaattatccataag--aaaaattcatacaacatttgaaaatttcacaaaatgatgatga 1433  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
    | ||||| |||||||||||||||||||||||| |||||||| |  ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  1434 ttatgataaagactaacccccttaccttagataaagattaatcacaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 1532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0761 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0761
Description:

Target: scaffold0761; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 219 - 316
Target Start/End: Complemental strand, 1509 - 1412
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaa 316  Q
    |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  1509 actaacccccttaccttagaagaagattaacccaaacccttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattctcttcaaa 1412  T

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Target: scaffold1500 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold1500
Description:

Target: scaffold1500; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 1448 - 1349
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||    
T  1448 actaacccccttaccttagaagaagattaacctaaactcttgcttcaattcagctcctaatcttaccccaattgattcctcaagctattctcttcaaaac 1349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 109 - 248
Target Start/End: Complemental strand, 128220 - 128083
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||||||||||||| |||||||||||| |||||||||||||| | |||||| |||||||||| ||||||||||| |||||||| ||||||    
T  128220 catacaaacatatcatcacagttgaagcacgaatttagcaacaattatccataa-gcaaaa-ttcatacaacttttgaaaatttgcaaaatgaagatgat 128123  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaa 248  Q
     ||||| |||||||||||||||||||||||| ||||||||    
T  128122 tatgataaagactaacccccttaccttagataaagattaa 128083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 82; Significance: 1e-38; HSPs: 1)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 109 - 226
Target Start/End: Complemental strand, 5112 - 4996
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||    
T  5112 catacaaacatatcgtcacagttggagtacgaatttagcaacaattatccattatg-aaaaattcatacaacatttgaaaatttacaaaatgataatgat 5014  T
Q  209 catgatgaagactaaccc 226  Q
     ||||| |||||||||||    
T  5013 tatgataaagactaaccc 4996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 82; Significance: 1e-38; HSPs: 3)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 134 - 304
Target Start/End: Original strand, 146838 - 147008
Alignment:
Q  134 agcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaagactaacccccttacc 233  Q
    |||| |||||||  ||||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||    
T  146838 agcatgaatttaggaacaattatccataa-gcaaaa-ttcatacaacatttgaaaatttacaaaatgatgatgattatgataaagactaacccccttacc 146935  T
Q  234 ttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
    |||||| |||||||| || ||||   ||||||||| |||||||||||| || ||||  ||||||| |||||||    
T  146936 ttagataaagattaatcccaacttaggcttcaatttagctcctaagctcactccaatcttgattcttcaagct 147008  T

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Target: scaffold0025; HSP #2
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 9061 - 9247
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcc-attatgcaaaaattcatacaacatttgaaaatttacaaa----atgatg 203  Q
    |||||||| |||||||||||| ||||||||||||||| |||||||||||| |||||| |||||| ||||| ||||||||||| || ||||    ||||||    
T  9061 catacaaacatatcatcacagatggagcacgaatttagcaacaattatccaattatg-aaaaatacataccacatttgaaaaattgcaaaaatgatgatg 9159  T
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
    ||||| ||||||||||||||| | |||||||||||| | ||||||||  ||||   |||||| || |||||||||||| || ||||||    
T  9160 atgattatgatgaagactaacacacttaccttagattatgattaacctcaacttaggcttcactttagctcctaagctcactccaatt 9247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 109 - 188
Target Start/End: Original strand, 148933 - 149012
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaa 188  Q
    |||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||    
T  148933 catacaaacatatcatcacagttggagcacaaatttaacaacaattatcaattatgcaaaaattcatacaacatttgaaa 149012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0302 (Bit Score: 79; Significance: 6e-37; HSPs: 1)
Name: scaffold0302
Description:

Target: scaffold0302; HSP #1
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 109 - 291
Target Start/End: Original strand, 12325 - 12505
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| |||||||||||||| ||||||||||||| |||||||||||||| || ||||| |||||||| ||||||||| || ||||||| | ||||||    
T  12325 catacaaacatatcatcacagttagagcacgaatttagcaacaattatccataat-caaaatttcatacagcatttgaaagtt-acaaaattaagatgat 12422  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaatt 291  Q
     ||||| ||||||||||||||||||||||||  ||||||| || ||||   |||||| || |||||||||||| || ||||||    
T  12423 tatgataaagactaacccccttaccttagatagagattaatcctaacttaggcttcactttagctcctaagctcactccaatt 12505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 221 - 318
Target Start/End: Original strand, 3285 - 3382
Alignment:
Q  221 taacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||||||||    
T  3285 taacccccttaccttagaagaagattaaccgaaactcttgcttcaattcagctcctaagcttaccccaattgattcttcaagctattcccttcaaaac 3382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 219 - 308
Target Start/End: Original strand, 2715 - 2803
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  2715 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcct-agcttaccccaattgattcctcaagctattc 2803  T

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Target: scaffold0009 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 108 - 290
Target Start/End: Original strand, 272236 - 272416
Alignment:
Q  108 tcatacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatga 207  Q
    ||||||||| ||||||| |||||||||| ||| ||||| ||| | |||||||| ||   |||||| |||||| |||||||||||||||||||||||||||    
T  272236 tcatacaaacatatcattacagttggagtacgtatttagcaatatttatccataatc--aaaatttatacaatatttgaaaatttacaaaatgatgatga 272333  T
Q  208 tcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    | ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || ||||||| |||| || |||||    
T  272334 ttatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctgagctcactccaat 272416  T

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Target: scaffold0498 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0498
Description:

Target: scaffold0498; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 109 - 304
Target Start/End: Original strand, 9090 - 9285
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgat 208  Q
    |||||||| ||| |||||||  ||||||||||||||| |||||||| ||||| | |||||| ||| |||||| ||||||||||| |||||||| ||||||    
T  9090 catacaaacataacatcacaaatggagcacgaatttagcaacaattttccataa-gcaaaa-ttcgtacaacttttgaaaatttgcaaaatgaagatgat 9187  T
Q  209 catgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaagct 304  Q
     ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| || ||||  ||||||| |||||||    
T  9188 tatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcactccaatcttgattcttcaagct 9285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 75; Significance: 2e-34; HSPs: 2)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 108107 - 107993
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||| |||||||||||||||||||||||||||||||||  | ||||   ||||||||||||||||||||||||||||||||||||||||| ||    
T  108107 atgattatgataaagactaacccccttaccttagatgaagattaattccaacttaggcttcaattcagctcctaagcttaccccaattgattcctcacgc 108008  T
Q  304 tattcttttcaaaac 318  Q
    |||||| ||||||||    
T  108007 tattctcttcaaaac 107993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 55904 - 55981
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || || |   ||||||||| ||||||||||||    
T  55904 atgattatgataaagactaacccccttaccttagataaagattaatcccaatttaggcttcaatttagctcctaagct 55981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 353 - 438
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    |||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  353 actaacccccttaccttagaagaagattaatccaaactctcgcttcaattcagctcctaagcttaccccaattgattcctcaagct 438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0369 (Bit Score: 73; Significance: 2e-33; HSPs: 1)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 219 - 307
Target Start/End: Original strand, 4044 - 4132
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctatt 307  Q
    ||||| |||||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4044 actaaaccccttaccttagaagatgattaaccctaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctatt 4132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0191 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0191
Description:

Target: scaffold0191; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 7390 - 7292
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || |||||||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||    
T  7390 actaacccccttacctttgaagaagattaaccctaattcttgcttcaattcagctcct-agcttaccccaattgattcctcaagctattctcttcaaaac 7292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 72; Significance: 9e-33; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 219 - 318
Target Start/End: Complemental strand, 10682 - 10583
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    ||||||||||||||||| || || ||||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||||||||| ||||||||    
T  10682 actaacccccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctaatcttaccacaattgattcctcaagctattctcttcaaaac 10583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 66; Significance: 4e-29; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 219 - 308
Target Start/End: Complemental strand, 5146 - 5057
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagctattc 308  Q
    |||||| |||||||||| || || ||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  5146 actaactcccttacctttgaagatgattaaccctaactcttgcttcaattcagctcctaagcttaccccaattgattcttcaagctattc 5057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1542 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold1542
Description:

Target: scaffold1542; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 109 - 175
Target Start/End: Complemental strand, 585 - 519
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcat 175  Q
    |||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  585 catacaaacatatcatcacagttggagcacgaatttagcaacaattatccattatgcaaaaattcat 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0467 (Bit Score: 59; Significance: 5e-25; HSPs: 1)
Name: scaffold0467
Description:

Target: scaffold0467; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 118 - 304
Target Start/End: Complemental strand, 10373 - 10188
Alignment:
Q  118 atatcatcacagttggagcacgaatttaacaacaattatccattatgcaaaaattcatacaacatttgaaaatttacaaaatgatgatgatcatgatgaa 217  Q
    ||||||||||||   ||||||||||||| |||||||||| ||| |  | |   ||||||||||||  ||||||  | ||| |||  ||||| |||| |||    
T  10373 atatcatcacagcaagagcacgaatttagcaacaattattcatcaacccatt-ttcatacaacatgagaaaatgcaaaaattgaacatgattatgaagaa 10275  T
Q  218 gactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||| |||||||||||||||||||| ||||||||| ||||   |||||| || ||||| |||||||||||||||||||||||||||||    
T  10274 gacaaacccccttaccttagatgatgattaaccccaacttaggcttcactttagctcataagcttaccccaattgattcctcaagct 10188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0183 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0183
Description:

Target: scaffold0183; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Original strand, 6919 - 6979
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6919 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 6979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 57; Significance: 8e-24; HSPs: 3)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 64455 - 64395
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  64455 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 64395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 109 - 148
Target Start/End: Complemental strand, 89899 - 89860
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaaca 148  Q
    |||||||| ||||||||| |||||||||||||||||||||    
T  89899 catacaaacatatcatcatagttggagcacgaatttaaca 89860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 109 - 154
Target Start/End: Original strand, 107959 - 108004
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaatt 154  Q
    |||||||| ||||||| ||||||||||||||||||||  |||||||    
T  107959 catacaaacatatcattacagttggagcacgaatttagtaacaatt 108004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 154365 - 154305
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  154365 actaacccccttaccttagaagaagattaacccaaactcttgcttcaattcagctcctaag 154305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 13993 - 13909
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || || |||||| || ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  13993 actaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcct-agcttaccccaattgattcctcaagct 13909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 219 - 304
Target Start/End: Complemental strand, 21047 - 20963
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || || |||||| || ||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  21047 actaacccccttacctttgaagatgattaatcctaacccttgcttcaattcagctcct-agcttaccccaattgattcctcaagct 20963  T

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Target: scaffold0367 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0367
Description:

Target: scaffold0367; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 17241 - 17142
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagc 303  Q
    ||||| ||||||||||||||||||||||||||||| ||  ||||  || ||| |||||||||||||||||||| || | |||||||||||||||||||||    
T  17241 atgattatgatgaagactaacccccttaccttagaagattattattcctaacccttgcttcaattcagctcct-aggtcaccccaattgattcctcaagc 17143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0772
Description:

Target: scaffold0772; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 5858 - 5943
Alignment:
Q  216 aagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaag 302  Q
    ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||| ||||||||||||||||||    
T  5858 aagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctta-cccaattgattcctcaag 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0772; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 5741 - 5793
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||| ||||| |||||||||||||||||| |||||||||| ||||    
T  5741 catacaaacataacatcaaagttggagcacgaatttagcaacaattattcatt 5793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0158 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0158
Description:

Target: scaffold0158; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 25532 - 25608
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    |||| |||||||||||||||||||||||||||||| | ||||||||||||||   ||||||||| ||||||||||||    
T  25532 tgattatgatgaagactaacccccttaccttagataaggattaacccaaacttaggcttcaatttagctcctaagct 25608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0155 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 23683 - 23623
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||    
T  23683 actaacccccttaacttagaagaagattaacccaaactcttgcttcaattcagttcctaag 23623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 47; Significance: 8e-18; HSPs: 3)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 37012 - 36930
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccc 286  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||||||    
T  37012 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagcttaccc 36930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 37117 - 37065
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  37117 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 37065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078; HSP #3
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 37437 - 37391
Alignment:
Q  1 aaccacaatcataacatataatcatacactctatcataattcaacaa 47  Q
    ||||||||||| ||||||||||||||||||| |||||||||||||||    
T  37437 aaccacaatcacaacatataatcatacactccatcataattcaacaa 37391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0597 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0597
Description:

Target: scaffold0597; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 910 - 835
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||   ||||||||| ||||||||||    
T  910 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0465 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0465
Description:

Target: scaffold0465; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 9914 - 9839
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||| || ||||   ||||||||| ||||||||||    
T  9914 atgattatgataaagactaacccccttaccttagatgaagattaatcccaacttaggcttcaatttagctcctaag 9839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 44; Significance: 5e-16; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 13317 - 13202
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||||||||||| |||| |  |||||||||||||    
T  13317 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctcctaagctcacccaatcttgattcctcaag 13218  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  13217 ctcttctctccaaaac 13202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 205 - 279
Target Start/End: Original strand, 339 - 413
Alignment:
Q  205 tgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||| |||||||||||||||||||||||||||||| | |||||| |||||||   ||||||||| ||||||||||    
T  339 tgattatgatgaagactaacccccttaccttagataaggattaatccaaacttaggcttcaatttagctcctaag 413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 6)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 22857 - 22935
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  22857 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 22935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Original strand, 27112 - 27190
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  27112 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 27190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #3
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 22604 - 22653
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  22604 acaatcataacatataatcataccctccatcataattcaacaacaacatg 22653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #4
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 26859 - 26908
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  26859 acaatcataacatataatcataccctccatcataattcaacaacaacatg 26908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 27007 - 27059
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  27007 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 27059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 22752 - 22804
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||| ||||    
T  22752 catacaaacatatcatcaaagttggagcacgaatttagcaacaattattcatt 22804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 278
Target Start/End: Original strand, 41860 - 42039
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatcca-ttatgcaa--------aaattcatacaacatttgaaaatttaca-aaa 198  Q
    |||||||| ||| |||||||||| ||||||||||||||||||||||||||| |||| |||        | |||||||||||| |   ||||| | | |||    
T  41860 catacaaacataacatcacagttagagcacgaatttaacaacaattatccatttattcaattcaacccatattcatacaacaatgagaaattgaaataaa 41959  T
Q  199 tgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    |||  ||||| |||||||||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  41960 tgaacatgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 42039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 3)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 204 - 282
Target Start/End: Complemental strand, 1528 - 1450
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagctt 282  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||  ||||||    ||||||||| |||||||||||||    
T  1528 atgattatgataaagactaacccccttaccttagatgaagattagaccaaacctaggcttcaatttagctcctaagctt 1450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #2
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 5 - 54
Target Start/End: Complemental strand, 1781 - 1732
Alignment:
Q  5 acaatcataacatataatcatacactctatcataattcaacaacaacatg 54  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  1781 acaatcataacatataatcataccctccatcataattcaacaacaacatg 1732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 1633 - 1581
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||||||||| |||||||||||||||||| |||||||||||||||    
T  1633 catacaaacatatcatcaaagttggagcacgaatttagcaacaattatccatt 1581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 2)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 45338 - 45415
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    ||||| |||||||||||||||||||||||||||||| | | |||| |||||||   ||||||||| ||||||||||||    
T  45338 atgattatgatgaagactaacccccttaccttagataatggttaatccaaacttaggcttcaattaagctcctaagct 45415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 204 - 281
Target Start/End: Original strand, 54724 - 54801
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    ||||| |||||||||||||||| ||||||||||||| | | |||| |||||||   ||||||||| ||||||||||||    
T  54724 atgattatgatgaagactaaccaccttaccttagataatggttaatccaaacttaagcttcaattaagctcctaagct 54801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 193 - 256
Target Start/End: Original strand, 18015 - 18078
Alignment:
Q  193 acaaaatgatgatgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||||| || ||||| |||||||||||||||||||||||||||||| | |||||| |||||||    
T  18015 acaaaataattatgattatgatgaagactaacccccttaccttagataatgattaatccaaact 18078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 204 - 318
Target Start/End: Complemental strand, 57424 - 57309
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttacccca-attgattcctcaag 302  Q
    ||||| ||||| |||||||||||||||||||||||| |||||||| || ||||   |||||| || |||| ||||||| |||| |  |||||||||||||    
T  57424 atgattatgataaagactaacccccttaccttagataaagattaatcccaacttaggcttcactttagctactaagctcacccaatcttgattcctcaag 57325  T
Q  303 ctattcttttcaaaac 318  Q
    || |||| | ||||||    
T  57324 ctcttctctccaaaac 57309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 34340 - 34266
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||   |||||| || |||||||||    
T  34340 atgattatgatgaagactaacccccttaccttagataatgattaatccaaacttaggcttcattttagctcctaa 34266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 204 - 290
Target Start/End: Complemental strand, 193429 - 193343
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaat 290  Q
    ||||| ||||| ||||||||||||||||||||| ||||||||||| || ||||   |||||| || |||||||||||| || |||||    
T  193429 atgattatgataaagactaacccccttaccttaaatgaagattaatcccaacttaggcttcactttagctcctaagctcactccaat 193343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1711 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold1711
Description:

Target: scaffold1711; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 219 - 279
Target Start/End: Complemental strand, 1236 - 1176
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    |||||||||| |||||| || |||||||||||| ||  |||||||||||||||||||||||    
T  1236 actaacccccctacctttgaagaagattaaccctaatccttgcttcaattcagctcctaag 1176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0364 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0364
Description:

Target: scaffold0364; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 278 - 318
Target Start/End: Complemental strand, 17750 - 17710
Alignment:
Q  278 agcttaccccaattgattcctcaagctattcttttcaaaac 318  Q
    |||||||||||||||||||||||||||||||| ||||||||    
T  17750 agcttaccccaattgattcctcaagctattctcttcaaaac 17710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0132
Description:

Target: scaffold0132; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 204 - 256
Target Start/End: Original strand, 13824 - 13876
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaact 256  Q
    ||||| |||||||||||||||||||||||||||||| | |||||| |||||||    
T  13824 atgattatgatgaagactaacccccttaccttagataatgattaatccaaact 13876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0132; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Original strand, 13718 - 13770
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||| ||||| |||| ||||||||||||| |||||||||||||||    
T  13718 catacaaacataacatcaaagttagagcacgaatttagcaacaattatccatt 13770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 109 - 157
Target Start/End: Original strand, 48399 - 48447
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatc 157  Q
    |||||||| ||||||| |||||||||||||||||||| |||||||||||    
T  48399 catacaaacatatcattacagttggagcacgaatttagcaacaattatc 48447  T

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Target: scaffold0706 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0706
Description:

Target: scaffold0706; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 6475 - 6373
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa--ttgattcctcaa 301  Q
    ||||| ||||| |||||||||||||||||||||||| | || ||| || ||||   ||||||||| |||||||||||| || ||||  ||||||| ||||    
T  6475 atgattatgataaagactaacccccttaccttagataaggaataatcccaacttaggcttcaatttagctcctaagctcactccaatcttgattcttcaa 6376  T
Q  302 gct 304  Q
    |||    
T  6375 gct 6373  T

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Target: scaffold0234 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0234
Description:

Target: scaffold0234; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 204 - 279
Target Start/End: Complemental strand, 17336 - 17261
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaag 279  Q
    ||||| ||||| ||||||||||| ||||||||||||| ||||||| || ||||   ||||||||| ||||||||||    
T  17336 atgattatgataaagactaacccgcttaccttagatggagattaatcccaacttaggcttcaatttagctcctaag 17261  T

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Target: scaffold0303 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0303
Description:

Target: scaffold0303; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 4378 - 4304
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| ||||| ||| |||||||||||||||||| | | |||||| ||||||| |||||||| || |||||||||    
T  4378 atgattatgataaagtctaacccccttaccttaggtaatgattaatccaaacttttgcttcactttagctcctaa 4304  T

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Target: scaffold0173 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0173
Description:

Target: scaffold0173; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 278
Target Start/End: Original strand, 5549 - 5623
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  5549 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaaacttgggcttcattttagctcctaa 5623  T

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Target: scaffold0084 (Bit Score: 35; Significance: 0.0000000001; HSPs: 2)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 204 - 309
Target Start/End: Complemental strand, 56045 - 55939
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaa-ttgattcctcaag 302  Q
    ||||| |||||||||||||||||||| ||| ||||| | |||||| |||||||   |||| |||| | |||||||| | ||||||| ||||||| |||||    
T  56045 atgattatgatgaagactaaccccctgaccgtagataatgattaatccaaacttaggctttaatttatctcctaagttcaccccaatttgattcttcaag 55946  T
Q  303 ctattct 309  Q
    || ||||    
T  55945 ctcttct 55939  T

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Target: scaffold0084; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 122 - 157
Target Start/End: Complemental strand, 56137 - 56102
Alignment:
Q  122 catcacagttggagcacgaatttaacaacaattatc 157  Q
    |||||||||| |||||||||||||||||||||||||    
T  56137 catcacagttagagcacgaatttaacaacaattatc 56102  T

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Target: scaffold0075 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 109 - 161
Target Start/End: Complemental strand, 34511 - 34459
Alignment:
Q  109 catacaaatatatcatcacagttggagcacgaatttaacaacaattatccatt 161  Q
    |||||||| ||| |||||||||| ||||||||||||| ||| |||||||||||    
T  34511 catacaaacataacatcacagttagagcacgaatttagcaataattatccatt 34459  T

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Target: scaffold0482 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0482
Description:

Target: scaffold0482; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 88
Target Start/End: Complemental strand, 7951 - 7913
Alignment:
Q  50 acatgcgccacttgtactttttctttctattttatctcc 88  Q
    |||||| |||||||||||||||||||||||||| |||||    
T  7951 acatgctccacttgtactttttctttctattttgtctcc 7913  T

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Target: scaffold0335 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 5508 - 5434
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||||||||||||||||||||||||||| | | |||||| |||| ||   |||||| || |||||||||    
T  5508 atgattatgatgaagactaacccccttaccttaggtaatgattaatccaatcttaggcttcactttagctcctaa 5434  T

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Target: scaffold0029 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 204 - 278
Target Start/End: Complemental strand, 49784 - 49710
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaa 278  Q
    ||||| |||| ||||||||||||||||||||||| | | |||||| |||||||   |||||| || |||||||||    
T  49784 atgattatgaagaagactaacccccttaccttaggtaatgattaatccaaacttaggcttcactttagctcctaa 49710  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 31631 - 31715
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  31631 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 31715  T

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Target: scaffold0076 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 219 - 304
Target Start/End: Original strand, 39425 - 39509
Alignment:
Q  219 actaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagcttaccccaattgattcctcaagct 304  Q
    ||||||||||||||||| || |  ||||| | | ||| |||||||||||||||||||| || | |||| |||||||||| ||||||    
T  39425 actaacccccttacctttgaagttgattatctctaacccttgcttcaattcagctcct-aggtcacccaaattgattccccaagct 39509  T

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Target: scaffold0039 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 204 - 281
Target Start/End: Complemental strand, 12450 - 12373
Alignment:
Q  204 atgatcatgatgaagactaacccccttaccttagatgaagattaacccaaactcttgcttcaattcagctcctaagct 281  Q
    ||||| ||||| || ||||||||||||||||||||| |||||| | || ||||    |||||||| ||||||||||||    
T  12450 atgattatgataaaaactaacccccttaccttagataaagattcatcccaacttagacttcaatttagctcctaagct 12373  T

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Target: scaffold0233 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0233
Description:

Target: scaffold0233; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 23082 - 23114
Alignment:
Q  50 acatgcgccacttgtactttttctttctatttt 82  Q
    |||||| ||||||||||||||||||||||||||    
T  23082 acatgctccacttgtactttttctttctatttt 23114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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