View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8485_low_10 (Length: 257)
Name: NF8485_low_10
Description: NF8485
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8485_low_10 |
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Alignment Details
Target: chr7 (Bit Score: 214; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 214; E-Value: 1e-117
Query Start/End: Original strand, 18 - 239
Target Start/End: Original strand, 43120047 - 43120268
Alignment:
| Q |
18 |
agagaagaatcctacaaaataagggatttgatcaatcaaattctggttgaccatacataggatatatggttattatttggatgagtttcttgttgccaca |
117 |
Q |
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| T |
43120047 |
agagaagaatcctacaaaataagggatttgatcaatcaaattctggttgaccatacataggatatatggttattatttggatgagtttcatgttgccaca |
43120146 |
T |
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| Q |
118 |
taaaatttgtgtttcttgtgaacaatatctcgtaataataagcactttctttaagcttaacctcaaagttgggatataaagacaataaatttctactttg |
217 |
Q |
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||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
43120147 |
taaaattagtgtttcttgtgaacaatatctcgtaataataagcactttctttaagcttaacctcaaagttgggatataaagacaataaatttctactttg |
43120246 |
T |
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| Q |
218 |
tgaaattaaaacgcgaaactct |
239 |
Q |
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|||||||||||||||||||||| |
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| T |
43120247 |
tgaaattaaaacgcgaaactct |
43120268 |
T |
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