View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8486_low_12 (Length: 245)
Name: NF8486_low_12
Description: NF8486
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8486_low_12 |
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Alignment Details
Target: chr2 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 232
Target Start/End: Complemental strand, 8797926 - 8797695
Alignment:
| Q |
1 |
tgtaactcaaccttcatctctctctctacataccccgcgtgcactctactgctttctcgctccttcataaaaaaccttgtattatccactagctagagag |
100 |
Q |
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| T |
8797926 |
tgtaactcaaccttcatctctctctctacatatcccgcgtgcactctactgctttctcactccttcataaaaaaccttgtattatccactagctagagag |
8797827 |
T |
|
| Q |
101 |
acaaagagagattcatttcttcattaaatgctgaaaatgtgtggaaagagagattaacactcattttccaaaggaaatctgtgcaggcttttgccagtag |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
8797826 |
acaaagagagattcatttcttcattaaatgctgaaaatgtgtggaaagagagattaacactcattttccaaaggaaatctgtgcaggcttttgccagtag |
8797727 |
T |
|
| Q |
201 |
tagaatccaaaaaacctcttcactacttcttc |
232 |
Q |
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|
|||||||||||||||||||||||||||||||| |
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| T |
8797726 |
tagaatccaaaaaacctcttcactacttcttc |
8797695 |
T |
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