View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8487_low_8 (Length: 270)
Name: NF8487_low_8
Description: NF8487
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8487_low_8 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 254; Significance: 1e-141; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 254; E-Value: 1e-141
Query Start/End: Original strand, 1 - 270
Target Start/End: Complemental strand, 40553191 - 40552922
Alignment:
| Q |
1 |
ctcagcgactctaattgctattgagtccgcatcaaccacatttgatcattattcttcttctcaatatatggcacaaccacaatttaaaaccttgataata |
100 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40553191 |
ctcagcgactttaattgctattgagtccgcatcaaccacatttgatcattattcttcttctcaatatatggcacaaccacaatttaaaaccttgataata |
40553092 |
T |
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| Q |
101 |
acaagaaattcaaccaacctggatcaaccgaggaagtgcatccatcacaagcttttctatgagatacgggcgatcagctaaaaatgattctttgtctagc |
200 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40553091 |
acaagaaagtcaaccaacctggatcaaccgaggaagtgcatccatcgcaagcttttctatgagatacgggcgatcagctaaaaatgattctttgtctagc |
40552992 |
T |
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| Q |
201 |
actagaggatcattctgattttcagtcacctcaggacgaagcacatttagcagcttgagcacttcatatc |
270 |
Q |
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|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
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| T |
40552991 |
actagaggatcattctgattttcagtcacctcaggaagaagcacatttagcagcttgagcacttcatatc |
40552922 |
T |
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