View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8488_low_21 (Length: 264)
Name: NF8488_low_21
Description: NF8488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8488_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 216; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 216; E-Value: 1e-119
Query Start/End: Original strand, 18 - 258
Target Start/End: Original strand, 44842201 - 44842441
Alignment:
| Q |
18 |
ctttctttgcctcactcataatcaccaaattctcaacatcatccctcaatttccaccaccataaaattcctaaacacatatccacacccaatttctcaac |
117 |
Q |
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| T |
44842201 |
ctttctttgcctcactcataaccaccaaattctcaacatcatccctcaatttccaccaccataaaattcctaaacacatatccacacccaatttctcaac |
44842300 |
T |
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| Q |
118 |
ccatctttctttcctaattacacccccaaaaaccgtgtcatccaccactggctttacaaccattctacaccaaactcttgttgtttcatgcaatcccaat |
217 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44842301 |
ccatctttctttcctaattacacccccaaaaaccgtgtcatccaccactggctttacaaccattctacaccaaactcttgttgtttcatgcaatcccaat |
44842400 |
T |
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| Q |
218 |
nnnnnnncaactctgctcaagaaactcctttcaacaccaaa |
258 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
44842401 |
aaaaaaacaactctgctcaagaaactcctttcaacaccaaa |
44842441 |
T |
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