View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8488_low_31 (Length: 239)

Name: NF8488_low_31
Description: NF8488
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8488_low_31
NF8488_low_31
[»] chr2 (30 HSPs)
chr2 (17-239)||(14500252-14500473)
chr2 (99-215)||(4060175-4060291)
chr2 (99-213)||(16918539-16918653)
chr2 (99-192)||(2750587-2750680)
chr2 (99-179)||(34041549-34041629)
chr2 (99-214)||(4438940-4439055)
chr2 (100-214)||(42922414-42922529)
chr2 (137-215)||(29503270-29503348)
chr2 (99-215)||(19322767-19322883)
chr2 (99-215)||(42602553-42602669)
chr2 (101-173)||(45026784-45026856)
chr2 (99-173)||(30410510-30410584)
chr2 (121-175)||(33839243-33839297)
chr2 (100-173)||(13803536-13803609)
chr2 (137-214)||(42327394-42327471)
chr2 (100-176)||(40416352-40416428)
chr2 (122-175)||(1729855-1729908)
chr2 (99-175)||(21303955-21304031)
chr2 (101-172)||(19244151-19244222)
chr2 (100-167)||(20217863-20217929)
chr2 (100-175)||(21195638-21195713)
chr2 (137-176)||(39715030-39715069)
chr2 (99-214)||(41908599-41908714)
chr2 (137-215)||(37480074-37480152)
chr2 (122-171)||(33569842-33569891)
chr2 (138-183)||(42860379-42860424)
chr2 (99-183)||(5147641-5147724)
chr2 (99-175)||(11062399-11062474)
chr2 (99-175)||(23052484-23052560)
chr2 (137-185)||(31573640-31573688)
[»] chr1 (32 HSPs)
chr1 (99-214)||(2799862-2799977)
chr1 (99-179)||(8177143-8177223)
chr1 (100-215)||(36371469-36371584)
chr1 (99-171)||(11063599-11063671)
chr1 (100-212)||(33700735-33700847)
chr1 (99-185)||(40810496-40810582)
chr1 (99-214)||(9165156-9165271)
chr1 (102-172)||(8904456-8904526)
chr1 (100-176)||(1247151-1247227)
chr1 (99-175)||(6122833-6122909)
chr1 (99-215)||(40257398-40257514)
chr1 (103-183)||(51814525-51814605)
chr1 (116-179)||(15786298-15786361)
chr1 (121-179)||(9117154-9117212)
chr1 (100-214)||(44961765-44961879)
chr1 (122-183)||(1138603-1138663)
chr1 (119-175)||(3265963-3266019)
chr1 (99-183)||(16893425-16893509)
chr1 (99-175)||(18459192-18459268)
chr1 (99-163)||(29753700-29753764)
chr1 (119-183)||(42412661-42412725)
chr1 (100-147)||(3679276-3679323)
chr1 (136-175)||(38947470-38947509)
chr1 (137-179)||(12587305-12587347)
chr1 (137-175)||(21267992-21268030)
chr1 (137-171)||(24019066-24019100)
chr1 (150-216)||(41508829-41508895)
chr1 (103-173)||(43446004-43446074)
chr1 (99-176)||(4566586-4566662)
chr1 (137-214)||(19528326-19528403)
chr1 (100-148)||(33981125-33981173)
chr1 (100-172)||(50919996-50920068)
[»] chr3 (47 HSPs)
chr3 (99-215)||(30311305-30311421)
chr3 (100-214)||(28703366-28703480)
chr3 (99-176)||(10445100-10445177)
chr3 (99-215)||(46518627-46518743)
chr3 (100-215)||(15048023-15048138)
chr3 (116-214)||(37788443-37788541)
chr3 (106-176)||(53412983-53413053)
chr3 (103-216)||(31520570-31520683)
chr3 (99-183)||(44069789-44069873)
chr3 (99-179)||(44743816-44743896)
chr3 (119-178)||(3427534-3427593)
chr3 (137-214)||(4222141-4222218)
chr3 (99-179)||(2667897-2667977)
chr3 (99-179)||(4844472-4844552)
chr3 (99-179)||(4870168-4870248)
chr3 (144-216)||(7975416-7975488)
chr3 (99-215)||(11642170-11642286)
chr3 (99-216)||(34062509-34062628)
chr3 (99-183)||(47454578-47454662)
chr3 (99-179)||(51903839-51903919)
chr3 (100-179)||(11090127-11090206)
chr3 (137-175)||(33899653-33899691)
chr3 (99-172)||(20501738-20501810)
chr3 (99-216)||(27093323-27093439)
chr3 (99-176)||(27259199-27259276)
chr3 (122-183)||(31608508-31608569)
chr3 (99-184)||(37051255-37051340)
chr3 (99-179)||(40063654-40063735)
chr3 (99-175)||(8075088-8075164)
chr3 (99-155)||(10969878-10969934)
chr3 (99-214)||(16354855-16354968)
chr3 (99-179)||(52769944-52770024)
chr3 (100-175)||(8796056-8796130)
chr3 (132-179)||(13808879-13808926)
chr3 (99-214)||(26505322-26505437)
chr3 (139-214)||(31788971-31789046)
chr3 (100-175)||(36720420-36720495)
chr3 (129-171)||(8390680-8390722)
chr3 (137-179)||(39253732-39253774)
chr3 (121-202)||(35415280-35415361)
chr3 (99-179)||(2709412-2709492)
chr3 (137-173)||(9345259-9345295)
chr3 (137-217)||(10499108-10499188)
chr3 (137-173)||(14186688-14186724)
chr3 (123-175)||(14339649-14339701)
chr3 (137-181)||(17108897-17108941)
chr3 (103-179)||(28531023-28531099)
[»] chr4 (40 HSPs)
chr4 (99-176)||(23377994-23378071)
chr4 (99-214)||(37109312-37109427)
chr4 (99-176)||(7292759-7292836)
chr4 (99-179)||(38869803-38869883)
chr4 (99-214)||(4249177-4249292)
chr4 (99-176)||(37274420-37274497)
chr4 (100-215)||(19680750-19680865)
chr4 (99-192)||(24991546-24991642)
chr4 (99-179)||(28635731-28635811)
chr4 (99-162)||(15180790-15180853)
chr4 (99-175)||(31759619-31759695)
chr4 (137-216)||(12798682-12798761)
chr4 (99-176)||(16581731-16581808)
chr4 (100-176)||(2184994-2185070)
chr4 (99-215)||(7949415-7949531)
chr4 (99-214)||(1730450-1730565)
chr4 (99-214)||(8030165-8030280)
chr4 (134-185)||(41346959-41347010)
chr4 (129-183)||(8306516-8306570)
chr4 (99-185)||(30938180-30938266)
chr4 (137-179)||(39509105-39509147)
chr4 (99-164)||(6666387-6666452)
chr4 (100-173)||(46295138-46295211)
chr4 (136-183)||(25869575-25869622)
chr4 (100-175)||(33632098-33632173)
chr4 (122-176)||(2622379-2622433)
chr4 (137-183)||(8325378-8325424)
chr4 (129-183)||(21660135-21660189)
chr4 (129-183)||(21668899-21668953)
chr4 (137-183)||(38838828-38838874)
chr4 (100-178)||(40285659-40285737)
chr4 (137-175)||(49576893-49576931)
chr4 (139-172)||(11592154-11592187)
chr4 (137-170)||(44865378-44865411)
chr4 (100-173)||(51622526-51622599)
chr4 (99-179)||(7539625-7539704)
chr4 (99-175)||(27372618-27372694)
chr4 (138-214)||(31826609-31826685)
chr4 (136-176)||(46329202-46329242)
chr4 (121-185)||(51969046-51969110)
[»] chr6 (14 HSPs)
chr6 (99-215)||(12188264-12188380)
chr6 (100-192)||(15951264-15951356)
chr6 (99-176)||(23910074-23910149)
chr6 (99-176)||(11306135-11306212)
chr6 (100-175)||(13330126-13330201)
chr6 (137-214)||(13227157-13227234)
chr6 (99-176)||(20213079-20213156)
chr6 (99-176)||(22107102-22107179)
chr6 (137-218)||(33549100-33549181)
chr6 (100-176)||(6385900-6385976)
chr6 (100-192)||(14199909-14200001)
chr6 (134-177)||(30127437-30127480)
chr6 (137-179)||(24641189-24641231)
chr6 (100-172)||(34444845-34444917)
[»] chr7 (33 HSPs)
chr7 (99-214)||(18363696-18363810)
chr7 (99-214)||(26459371-26459486)
chr7 (100-192)||(29785263-29785355)
chr7 (99-214)||(39631844-39631959)
chr7 (100-216)||(43215182-43215298)
chr7 (99-176)||(17113833-17113910)
chr7 (99-192)||(9608590-9608683)
chr7 (99-192)||(9836162-9836255)
chr7 (100-212)||(7744074-7744186)
chr7 (103-190)||(37094773-37094860)
chr7 (100-183)||(37162312-37162395)
chr7 (137-214)||(30442488-30442565)
chr7 (99-179)||(17040973-17041053)
chr7 (99-179)||(25655189-25655269)
chr7 (139-215)||(45709709-45709785)
chr7 (103-173)||(13106747-13106817)
chr7 (100-172)||(5273552-5273624)
chr7 (99-211)||(15905635-15905746)
chr7 (139-183)||(25590642-25590686)
chr7 (99-215)||(30579334-30579450)
chr7 (137-176)||(19553491-19553530)
chr7 (137-176)||(22760901-22760940)
chr7 (115-214)||(33869422-33869521)
chr7 (137-172)||(38374598-38374633)
chr7 (137-175)||(20335830-20335868)
chr7 (99-169)||(21558173-21558243)
chr7 (122-176)||(23552156-23552210)
chr7 (99-172)||(2962501-2962574)
chr7 (100-173)||(31835233-31835306)
chr7 (99-176)||(33222408-33222485)
chr7 (119-175)||(23301583-23301639)
chr7 (123-175)||(43590946-43590998)
chr7 (139-179)||(48771973-48772013)
[»] chr5 (22 HSPs)
chr5 (102-176)||(34984844-34984918)
chr5 (99-214)||(7918430-7918545)
chr5 (103-176)||(18595966-18596039)
chr5 (100-192)||(37258328-37258420)
chr5 (109-176)||(14285199-14285266)
chr5 (99-175)||(25627096-25627171)
chr5 (115-215)||(26078028-26078128)
chr5 (137-185)||(43442225-43442273)
chr5 (99-214)||(21549099-21549213)
chr5 (99-176)||(16773845-16773922)
chr5 (122-214)||(29075781-29075873)
chr5 (100-175)||(25979209-25979284)
chr5 (100-175)||(39327053-39327127)
chr5 (137-179)||(84859-84901)
chr5 (100-178)||(18206608-18206686)
chr5 (103-169)||(18974005-18974071)
chr5 (122-216)||(22020846-22020940)
chr5 (99-172)||(28285294-28285367)
chr5 (100-173)||(31074273-31074346)
chr5 (138-178)||(87423-87463)
chr5 (99-175)||(17028225-17028301)
chr5 (99-175)||(19043497-19043572)
[»] chr8 (32 HSPs)
chr8 (99-214)||(18540298-18540413)
chr8 (99-215)||(16852339-16852455)
chr8 (100-179)||(6569733-6569812)
chr8 (100-183)||(11492035-11492118)
chr8 (99-214)||(29431011-29431126)
chr8 (99-173)||(11793482-11793556)
chr8 (99-216)||(12988426-12988542)
chr8 (99-176)||(33017252-33017328)
chr8 (99-175)||(11819815-11819891)
chr8 (137-185)||(36205224-36205272)
chr8 (137-176)||(22193363-22193402)
chr8 (137-215)||(19703486-19703564)
chr8 (120-214)||(30483866-30483960)
chr8 (100-214)||(33727835-33727949)
chr8 (100-173)||(26688906-26688979)
chr8 (100-172)||(31408084-31408156)
chr8 (99-175)||(44780075-44780151)
chr8 (137-176)||(968400-968439)
chr8 (137-212)||(3624582-3624657)
chr8 (100-215)||(18897165-18897279)
chr8 (115-178)||(37663963-37664026)
chr8 (99-173)||(6536561-6536635)
chr8 (121-215)||(13129667-13129761)
chr8 (129-175)||(27750769-27750815)
chr8 (137-183)||(28783091-28783137)
chr8 (137-183)||(35641900-35641946)
chr8 (136-217)||(11928729-11928810)
chr8 (99-184)||(29915881-29915966)
chr8 (137-173)||(3524400-3524436)
chr8 (143-215)||(4830486-4830558)
chr8 (99-171)||(28787457-28787529)
chr8 (138-174)||(29858049-29858085)
[»] scaffold0299 (1 HSPs)
scaffold0299 (121-179)||(11563-11621)
[»] scaffold0238 (1 HSPs)
scaffold0238 (100-202)||(2673-2775)
[»] scaffold0194 (1 HSPs)
scaffold0194 (137-183)||(13045-13091)
[»] scaffold0180 (1 HSPs)
scaffold0180 (103-176)||(19928-20000)
[»] scaffold0291 (1 HSPs)
scaffold0291 (137-179)||(2469-2511)
[»] scaffold0063 (1 HSPs)
scaffold0063 (100-178)||(35351-35429)
[»] scaffold0118 (1 HSPs)
scaffold0118 (137-214)||(41632-41709)
[»] scaffold0258 (1 HSPs)
scaffold0258 (137-176)||(15322-15361)
[»] scaffold0009 (1 HSPs)
scaffold0009 (100-179)||(19809-19888)
[»] scaffold1367 (1 HSPs)
scaffold1367 (121-179)||(823-881)
[»] scaffold0004 (1 HSPs)
scaffold0004 (100-178)||(81526-81604)
[»] scaffold0021 (1 HSPs)
scaffold0021 (139-183)||(156990-157032)
[»] scaffold0002 (1 HSPs)
scaffold0002 (100-176)||(94935-95009)
[»] scaffold0044 (1 HSPs)
scaffold0044 (134-178)||(92983-93027)


Alignment Details
Target: chr2 (Bit Score: 137; Significance: 1e-71; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 17 - 239
Target Start/End: Complemental strand, 14500473 - 14500252
Alignment:
Q  17 attgtcattcaggtctctacaaaaacacatttatatacattctatatgaatatactgtcttctcataannnnnnnnnnnnnngaagaagctaaactatcc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||               |||||||||||||||||    
T  14500473 attgtcattcaggtctctacaaaaacacatttatatacattctatatgaatatattgtcttctcataattttattttttttt-aagaagctaaactatcc 14500375  T
Q  117 ccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtttt 216  Q
    |||||||||| |||| ||| ||||||||| || |||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||||||||    
T  14500374 ccctcaaattggcaccagagagaatcgaatctgagacctagaggaggagcacactcccagatctcaagcttataccactaggccaaaccaagtgggtttt 14500275  T
Q  217 gtcttctcataattgataagtcc 239  Q
    |||||||||||||||||||||||    
T  14500274 gtcttctcataattgataagtcc 14500252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 4060175 - 4060291
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| ||||||||||||  ||| ||| |||||||||||| ||| || |||||| ||||||||| ||| | ||||||  ||||| || ||    
T  4060175 gaagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgagatcttgaggagaagcacactctcaggtttcaaaccaataccactagg 4060274  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  4060275 ccaacccaagtgggttt 4060291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 213
Target Start/End: Original strand, 16918539 - 16918653
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||||||  ||   |||| | |||| ||| |||||| |||||||||||| ||||||||||||||||||||||| |||||  ||||| || ||    
T  16918539 gaagaagctaaactaaaccatccaaagtggcaccagagagaatccaacctaagaccttgaggaggagcacactcccagatcccaaaccaataccactagg 16918638  T
Q  199 ccaaaccaagtgggt 213  Q
    |||| ||||||||||    
T  16918639 ccaacccaagtgggt 16918653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 2750587 - 2750680
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||| | |||||| ||||| ||||||||| || |||  ||| ||||||||    
T  2750587 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacatgagaccttgaggaagagcacactaccggattccaagcttatacc 2750680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 34041549 - 34041629
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||||| |||||||||||| |||| |||  ||||| ||||| |||||| |||||||||||||||| ||||||    
T  34041549 gaagaagctaaactaaccccctcaaattggcaccagagggaatcaaacctgagaccttgaggaggagcacactctcagatc 34041629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 4438940 - 4439055
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| ||| |||||||| | || |||||||||||||| |  ||||| |||||||||||||||| |||||| |||  | |||||  | ||    
T  4438940 gaagaagctaaactaaccctctcaaattggtaccagaaagaatcgaacatgcgaccttgaggaggagcacactctcagatcccaagttaataccattagg 4439039  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  4439040 ccaacccaagtgggtt 4439055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 42922529 - 42922414
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacc-tagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||||| |||| ||||||| |||| ||| |||||||||||| ||||| | |||||||||||||||||||| |  ||| |  ||||| || ||    
T  42922529 aagaagctaaactaaccccatcaaattggcaccagagagaatcgaacctgagacctttgaggaggagcacactcccaggttccaagccaataccactagg 42922430  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  42922429 ccaacccaagtgggtt 42922414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 29503348 - 29503270
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||||||||| |||||| |||||||||||||||||||| || |||||  ||||| || |||||| ||||||||||||    
T  29503348 agaatcgaacctgagaccttgaggaggagcacactcccaggtcccaaaccaataccactaggccaacccaagtgggttt 29503270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 19322883 - 19322767
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||| ||||||| || ||||||||| |||||||| |||||| ||||  |||||| || ||||||||||||||||| || |||||  ||||| || |     
T  19322883 gaagaagttaaactaacctcctcaaattggcactagagagaatcaaaccagagaccttgaagaggagcacactcccaggtcccaaaccaataccactaga 19322784  T
Q  199 ccaaaccaagtgggttt 215  Q
     ||| ||||||||||||    
T  19322783 tcaacccaagtgggttt 19322767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 42602669 - 42602553
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| | |||||| ||||  || |||||| |||||||||||| ||| |||||||||||||||| || ||| |  ||||| || ||    
T  42602669 gaagaagctaaattagcccacccaaattggcaccggagagaatcaaacctaagaccttgagaaggagcacactcccaggtcccaagccaataccactagg 42602570  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  42602569 ccaacccaagtgggttt 42602553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 101 - 173
Target Start/End: Complemental strand, 45026856 - 45026784
Alignment:
Q  101 agaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||||| |||||||||||| |||| ||| |||||| ||| | |||||| |||||||||||||||||    
T  45026856 agaagctaaactaaccccctcaaattggcaccagagagaatcaaacatgagaccttgaggaggagcacactcc 45026784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 30410510 - 30410584
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||||||| |||||||||||| |||| ||| | |||||||| | || ||| |||||||||||||||||    
T  30410510 gaagaagctaaactaaccccctcaaattggcaccagagaaaatcgaacatgagtccttgaggaggagcacactcc 30410584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 175
Target Start/End: Original strand, 33839243 - 33839297
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||| ||||||||| |||||| |||||| |||||||||||||||||||    
T  33839243 caaattagcaccagaaagaattgaacctgagaccttgaggaggagcacactccca 33839297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 13803609 - 13803536
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||| ||||||| |||||||||||| |||  ||| | |||||||||| |||||| |||||||||||||||||    
T  13803609 aagaaggtaaactaaccccctcaaattggcatcagagataatcgaacctgagaccttgaggaggagcacactcc 13803536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 42327394 - 42327471
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||||||||||| |||||| |||||||||||||||||||| || ||| |  ||||| || |||||| |||||||||||    
T  42327394 agaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactaggccaacccaagtgggtt 42327471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 40416352 - 40416428
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||| |||||||| |||| ||||||| |||| ||| |||||||||||| ||||||  |||||||||| ||||||||    
T  40416352 aagaatctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttaaggaggagcatactcccag 40416428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 175
Target Start/End: Complemental strand, 1729908 - 1729855
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||| |||| ||| |||||| || |||||||||||||||||||||||||||||    
T  1729908 aaattggcaccagagagaatcaaatctaagacctagaggaggagcacactccca 1729855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 21303955 - 21304031
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||||||||||||  ||| ||| |||||||||||| | ||||  |||||||||| |||||||    
T  21303955 gaagaagctaaattaaccccctcaaattgacaccagagagaatcgaacctgaaaccttcaggaggagcatactccca 21304031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 101 - 172
Target Start/End: Complemental strand, 19244222 - 19244151
Alignment:
Q  101 agaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||| ||||| || ||| |||||||| |||| ||| |||||||||||| |||||| | ||||||||||||||    
T  19244222 agaaactaaattagcccactcaaattggcaccagagagaatcgaacctgagaccttggggaggagcacactc 19244151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 167
Target Start/End: Complemental strand, 20217929 - 20217863
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagca 167  Q
    ||||||||||| || ||| |||||||| ||||  | |||||||||||||||||||| |||||||||||    
T  20217929 aagaagctaaa-tagcccactcaaattggcacatggaagaatcgaacctaagaccttgaggaggagca 20217863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 21195638 - 21195713
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||| || |||   ||||||  |||||||  ||||||||||| |||||| |||||||||||||||||||    
T  21195638 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 21195713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 39715069 - 39715030
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  39715069 agaatcgaacctgagacctcgaggaggagcacactcccag 39715030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 41908599 - 41908714
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| ||| | |||||| ||||  |  | |||||||| | |||||| ||||||||||||||||| || ||||||||  | ||| |  ||    
T  41908599 gaagaagctaaactagcccacccaaattggcaccggggataatcgaacttgagaccttgaggaggagcacactccaaggtctcaaaccgacaccaccagg 41908698  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  41908699 ccaacccaagtgggtt 41908714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 215
Target Start/End: Complemental strand, 37480152 - 37480074
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||||||||| |||||| |||||||||||||||| ||| || ||| |  ||||| |  |||||| ||||||||||||    
T  37480152 agaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccaccaggccaacccaagtgggttt 37480074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 171
Target Start/End: Original strand, 33569842 - 33569891
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacact 171  Q
    |||||||||| ||| |||||||||||| |||||| ||||| |||||||||    
T  33569842 aaattagcaccagagagaatcgaacctgagacctcgaggaagagcacact 33569891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 138 - 183
Target Start/End: Complemental strand, 42860424 - 42860379
Alignment:
Q  138 gaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||| | |||||| |||||||||||||||||||| ||||||    
T  42860424 gaatcgaacttgagacctcgaggaggagcacactcccaggtctcaa 42860379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 5147641 - 5147724
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||| |||| ||||||| |  | ||| ||||||||| |  |||||| ||| ||||||| |||||||||||||||    
T  5147641 gaagaagctaaactaacccc-tcaaattggtgcaagagagaatcgaatccgagaccttgagaaggagcatactcccagatctcaa 5147724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 11062474 - 11062399
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||||||| | || |||||||  ||| ||| |||||| ||||| |||||| |||||| ||||||||||||    
T  11062474 gaagaagctaaactaactcc-tcaaattgacacaagagagaatcaaacctgagaccttgaggagaagcacactccca 11062399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 23052484 - 23052560
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||| ||||| || ||| | |||| | |||||||  |||||||||||| |||||| |||||| ||||||||||||    
T  23052484 gaagaaactaaattagcccacccaaactggcactagggagaatcgaacctgagaccttgaggagaagcacactccca 23052560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 185
Target Start/End: Original strand, 31573640 - 31573688
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    |||||||||||| |||| |  ||||||||||||||| ||||||||||||    
T  31573640 agaatcgaacctgagacatcaaggaggagcacactctcagatctcaaac 31573688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 2799977 - 2799862
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||||||| | |||||| || ||    
T  2799977 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagatctcaagcctataccactagg 2799878  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| | |||||||||    
T  2799877 ccaagcgaagtgggtt 2799862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 8177143 - 8177223
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||||| |||||||||||| |||| ||| |||||||||||| | |||| |||||||||||||||||||||||    
T  8177143 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgaaaccttgaggaggagcacactcccagatc 8177223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 36371584 - 36371469
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||||||||||| |||||||||||| |||  ||| |||||||||||| |||||| |||||||||||||||||||| |  ||| |  ||||| || |||    
T  36371584 aagaagctaaactaaccccctcaaattggcatcagagagaatcgaacctcagaccttgaggaggagcacactcccaggttccaagccaataccactaggc 36371485  T
Q  200 caaaccaagtgggttt 215  Q
    ||| ||||||||||||    
T  36371484 caacccaagtgggttt 36371469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 171
Target Start/End: Complemental strand, 11063671 - 11063599
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacact 171  Q
    ||||||||||||||| |||| ||||||| |||||||| ||||||||||||||||||| |||||||| ||||||    
T  11063671 gaagaagctaaactaaccccttcaaattggcactagagagaatcgaacctaagaccttgaggaggaacacact 11063599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 33700735 - 33700847
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||| ||||||| |||||| ||||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||||  ||| |  ||||| || |||    
T  33700735 aagaagttaaactaacccccttaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccagattccaagccaataccactaggc 33700834  T
Q  200 caaaccaagtggg 212  Q
    ||| |||||||||    
T  33700835 caacccaagtggg 33700847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 185
Target Start/End: Complemental strand, 40810582 - 40810496
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    ||||||||||||||| ||| |||||||| |||| ||| |||||||||||| |||||| || ||||| |||||||||||||| |||||    
T  40810582 gaagaagctaaactaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaagaggaacacactcccagatcccaaac 40810496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 9165156 - 9165271
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||| ||||| || |||||||||||| |||| ||| ||||| |||||| |||| | |||||||||||||||||||| || ||| |  ||||| || ||    
T  9165156 gaagaaactaaagtaaccccctcaaattggcaccagagagaattgaacctgagactttgaggaggagcacactcccaggtcccaagccaataccactagg 9165255  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  9165256 ccaacccaagtgggtt 9165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 8904526 - 8904456
Alignment:
Q  102 gaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||| ||||||| |||||||||||| |||| ||| |||||||||| | |||||| ||||||||||||||||    
T  8904526 gaagttaaactaaccccctcaaattggcaccagagagaatcgaacttgagaccttgaggaggagcacactc 8904456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 1247227 - 1247151
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||| || |||| ||||||| | || ||| |||||||||||| |||||| ||||||||| ||||||||||    
T  1247227 aagaagctaaaataaccccttcaaattggtaccagagagaatcgaacctgagaccttgaggaggagtacactcccag 1247151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 6122909 - 6122833
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||||| |||||| |||||||||||||||||||    
T  6122909 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacactccca 6122833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 40257514 - 40257398
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| ||| | ||||||  |||  || ||||| |||| | |||||| |||||||||||||||||||| |||||| |  ||||| |  ||    
T  40257514 gaagaagctaaactagcccacccaaattgacaccggatagaattgaacttgagacctcgaggaggagcacactcccaggtctcaagccaataccaccagg 40257415  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  40257414 ccaacccaagtgggttt 40257398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 103 - 183
Target Start/End: Complemental strand, 51814605 - 51814525
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||| || ||| | |||||| ||||  || |||||||||||| |||||| |||||||||||||||| ||||||||||    
T  51814605 aagctaaattagcccacccaaattggcaccggagagaatcgaacctgagaccttgaggaggagcacactctcagatctcaa 51814525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 116 - 179
Target Start/End: Original strand, 15786298 - 15786361
Alignment:
Q  116 cccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||  ||| | | |||||||||||| |||||| |||||||||||||||||||||||    
T  15786298 cccctcaaattgacaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatc 15786361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 9117212 - 9117154
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||| ||| ||||||||||||||| ||||||  |||||||||||||| |||||||    
T  9117212 caaattagtactggaaagaatcgaacctgagacctcaaggaggagcacacttccagatc 9117154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 214
Target Start/End: Complemental strand, 44961879 - 44961765
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    ||||||||||| || ||| | ||||||  ||||||| |||||||||||| |||||  ||||||||||||||||  | ||||||| || ||||| |  | |    
T  44961879 aagaagctaaattagcccacccaaattgacactagagagaatcgaacctgagaccctgaggaggagcacactcttaaatctcaagctaataccacctgac 44961780  T
Q  200 caaaccaagtgggtt 214  Q
    ||| |||||||||||    
T  44961779 caacccaagtgggtt 44961765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Complemental strand, 1138663 - 1138603
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||| |||||||| ||| ||||||||||||||| || |||||||||||||| |||||||||    
T  1138663 aaattggcactagagagattcgaacctaagaccttga-gaggagcacactccaagatctcaa 1138603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 175
Target Start/End: Complemental strand, 3266019 - 3265963
Alignment:
Q  119 ctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||| | || ||| |||||||||||| |||||| |||||||||||||||||||    
T  3266019 ctcaaattggaaccagagagaatcgaacctgagaccttgaggaggagcacactccca 3265963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 16893509 - 16893425
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||||||| || ||| ||||||||  |||  || | |||||||||| |||||| ||||||||| ||||||||| |||||||    
T  16893509 gaagaagctaaattagcccactcaaattgacaccggagaaaatcgaacctgagacctcgaggaggagtacactcccaaatctcaa 16893425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 18459192 - 18459268
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||| |||  |||||| |||||||||||||  || |||||| || |||||||||  ||||||||||||||||||    
T  18459192 gaagaagttaatttatcccactcaaattagcacatgagagaatcaaatctaagacctcaaggaggagcacactccca 18459268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 163
Target Start/End: Complemental strand, 29753764 - 29753700
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggagg 163  Q
    ||||||||||||||| ||| || ||||| |||| ||| |||||||||||| |||||| |||||||    
T  29753764 gaagaagctaaactaaccctcttaaattggcaccagagagaatcgaacctgagaccttgaggagg 29753700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 119 - 183
Target Start/End: Original strand, 42412661 - 42412725
Alignment:
Q  119 ctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||  |||||| |||||| |||| ||||| || ||||| |||||||||||||||||||||    
T  42412661 ctcaaattgacactaggaagaattgaacataagatcttgaggaagagcacactcccagatctcaa 42412725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 147
Target Start/End: Original strand, 3679276 - 3679323
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacc 147  Q
    |||||||||||||| |||||||||||| |||| ||| |||||||||||    
T  3679276 aagaagctaaactaaccccctcaaattggcaccagagagaatcgaacc 3679323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 175
Target Start/End: Original strand, 38947470 - 38947509
Alignment:
Q  136 aagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||||| |||||| |||||||||||||||||||    
T  38947470 aagaatcgaacctgagaccttgaggaggagcacactccca 38947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 12587347 - 12587305
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| |||||| |||||||||||||||| ||||||    
T  12587347 agaatcgaacctgagacctcgaggaggagcacactcacagatc 12587305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 21267992 - 21268030
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||| |||| |||||||||||||||||||||||||||    
T  21267992 agaatcaaacccaagacctagaggaggagcacactccca 21268030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 171
Target Start/End: Complemental strand, 24019100 - 24019066
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacact 171  Q
    ||||||||||||||||||| |||||||||||||||    
T  24019100 agaatcgaacctaagaccttgaggaggagcacact 24019066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 216
Target Start/End: Complemental strand, 41508895 - 41508829
Alignment:
Q  150 agacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtttt 216  Q
    |||||| ||||||||||||||||||||||| |||||   |||| |  |||||| |||||||||||||    
T  41508895 agaccttgaggaggagcacactcccagatcccaaaccagtaccaccaggccaacccaagtgggtttt 41508829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 173
Target Start/End: Complemental strand, 43446074 - 43446004
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||| ||| |||||||| ||||  |  |||||||||| | |||||| |||||||||||||||||    
T  43446074 aagctaaactagcccactcaaattggcaccggggagaatcgaacatgagaccttgaggaggagcacactcc 43446004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 4566662 - 4566586
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| |||| | |||||  ||  ||| |||||||||||| |||||  ||||||||||||||||||||    
T  4566662 gaagaagctaaactaacccctt-aaattgacatcagagagaatcgaacctgagaccctgaggaggagcacactcccag 4566586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 19528326 - 19528403
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||||||||||| |||||| ||||||||||||||||  ||||| ||| |  ||||| |  |||||| |||||||||||    
T  19528326 agaatcgaacctgagaccttgaggaggagcacactcatagatcccaagccaataccaccaggccaacccaagtgggtt 19528403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Original strand, 33981125 - 33981173
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacct 148  Q
    |||||||||||||| ||||||||||| ||||  ||| ||||||||||||    
T  33981125 aagaagctaaactaaccccctcaaatgagcatcagagagaatcgaacct 33981173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 50920068 - 50919996
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||||||||||||| |||| |||||||  ||| ||| |||||||||||| | ||||  |||| ||||||||||    
T  50920068 aagaagctaaactaaccccttcaaattgacaccagagagaatcgaacctgaaaccttaaggatgagcacactc 50919996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 61; Significance: 3e-26; HSPs: 47)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 30311421 - 30311305
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||| | | |||||||||||| |||||| ||||||||||||||||||||||| ||| | |||||| || ||    
T  30311421 gaagaagctaaactaaccccctcaaattggcaccaaagagaatcgaacctgagaccttgaggaggagcacactcccagatcccaagcctataccactagg 30311322  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||| ||||||||    
T  30311321 ccaacccaggtgggttt 30311305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 28703366 - 28703480
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||||||||||| || ||||||||| |||| ||| |||||||||||| |||||| || |||||||||||||||||||| ||| || ||| | |||| |    
T  28703366 aagaagctaaactaacctcctcaaattggcaccagagagaatcgaacctgagaccttgaagaggagcacactcccagatcccaagctaatatcactggac 28703465  T
Q  200 caaaccaagtgggtt 214  Q
    ||| |||||||||||    
T  28703466 caacccaagtgggtt 28703480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 10445100 - 10445177
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| || ||| ||||||||||||| ||| |||||||||||| |||||| ||||||||||||||||||||    
T  10445100 gaagaagctaaattagcccactcaaattagcaccagagagaatcgaacctgagacctcgaggaggagcacactcccag 10445177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 46518743 - 46518627
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||  ||| |||||| ||||| | |||| ||||||||||||||||||||||| ||| |  ||||| ||  |    
T  46518743 gaagaagctaaactaaccccctcaaattggcatcagagagaatcaaacctgaaaccttgaggaggagcacactcccagatcccaagccaataccactatg 46518644  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  46518643 ccaacccaagtgggttt 46518627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 15048023 - 15048138
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||| ||||||| |||||||||||| |||| ||| | |||||||||| |||||| ||||||||||||| ||||||||| ||| | ||||||  |  ||    
T  15048023 aagaagttaaactaaccccctcaaattggcaccagagataatcgaacctgagaccttgaggaggagcacattcccagatcccaagcctataccattaagc 15048122  T
Q  200 caaaccaagtgggttt 215  Q
    ||| ||||||||||||    
T  15048123 caacccaagtgggttt 15048138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 116 - 214
Target Start/End: Original strand, 37788443 - 37788541
Alignment:
Q  116 cccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||| || |  |||    ||||| ||||||||| |||||||||||    
T  37788443 cccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcctaggttccaagtcaataccactgggccaacccaagtgggtt 37788541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 176
Target Start/End: Complemental strand, 53413053 - 53412983
Alignment:
Q  106 ctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||| |||||||||||| |||| ||| ||||| |||||| |||||| ||||||||||||||||||||    
T  53413053 ctaaactaaccccctcaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcccag 53412983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 216
Target Start/End: Original strand, 31520570 - 31520683
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaa 202  Q
    |||||||| || ||| ||||||||  |||| || |||||| |||||||||||| ||||||||||||||||||||||| ||| |  || || |  ||||||    
T  31520570 aagctaaattagcccactcaaattgacactggagagaatcaaacctaagacctcgaggaggagcacactcccagatcccaagccaatgccaccaggccaa 31520669  T
Q  203 accaagtgggtttt 216  Q
     |||||||||||||    
T  31520670 cccaagtgggtttt 31520683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 183
Target Start/End: Complemental strand, 44069873 - 44069789
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||| ||| |  ||||| ||||  ||||||||| ||||| |||||| ||||||||||||||||| |||||||||    
T  44069873 gaagaagctaaactagcccacctaaattggcaccggaaagaatcaaacctgagaccttgaggaggagcacactccaagatctcaa 44069789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 44743816 - 44743896
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| | |||||| ||||| || | |||||||||| |||||| |||||||||||||||||||||||    
T  44743816 gaagaagctaaattaacccacccaaattggcactggagataatcgaacctgagacctcgaggaggagcacactcccagatc 44743896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 178
Target Start/End: Original strand, 3427534 - 3427593
Alignment:
Q  119 ctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    |||||||| |||||||| ||||||||| || |||||| ||||||||||||||||||||||    
T  3427534 ctcaaattggcactagagagaatcgaatctgagaccttgaggaggagcacactcccagat 3427593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 4222218 - 4222141
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||||||||||||||| | ||||||||||||||||||||||| ||| |  ||||| ||  ||||| |||||||||||    
T  4222218 agaatcgaacctaagactttgaggaggagcacactcccagatcccaagccaataccactaagccaacccaagtgggtt 4222141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 2667977 - 2667897
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||||| ||| |  |||||  ||||||| | |||||||||| |||||| ||||| |||||||||||||||||    
T  2667977 gaagaagctaaactagcccacctaaattgacactagagataatcgaacctgagacctcgaggaagagcacactcccagatc 2667897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 4844472 - 4844552
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| | |||||| ||||  || |||||||| ||| |||||| |||||||||||||||||||||||    
T  4844472 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatc 4844552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 4870168 - 4870248
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| | |||||| ||||  || |||||||| ||| |||||| |||||||||||||||||||||||    
T  4870168 gaagaagctaaattagcccacacaaattggcaccggagagaatcgatcctgagacctcgaggaggagcacactcccagatc 4870248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 7975488 - 7975416
Alignment:
Q  144 aacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtttt 216  Q
    |||||||||||| ||||||||||||||||||||||| ||| | |||||| || |||||| | || ||||||||    
T  7975488 aacctaagaccttgaggaggagcacactcccagatcccaagcctataccactaggccaacctaaatgggtttt 7975416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 11642170 - 11642286
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| ||| || |||||  ||||| | | |||||||||| |||||| |||||||| |||| || |||||| |||  |||||||  | ||    
T  11642170 gaagaagctaaactaaccctcttaaattgacactaaagataatcgaacctgagaccttgaggaggatcacaatctcagatcccaagtttataccagtagg 11642269  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  11642270 ccaatccaagtgggttt 11642286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 34062509 - 34062628
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggag--cacactcccagatctcaaacttataccgctg 196  Q
    ||||||| ||||||| |  ||||||||| |||| ||| ||||| |||||| |||||| |||||||||  |||||||||| || |||| |  ||| | |||    
T  34062509 gaagaagttaaactaacatcctcaaattggcaccagagagaattgaacctgagaccttgaggaggagagcacactcccaaatttcaagccaatatcactg 34062608  T
Q  197 ggccaaaccaagtgggtttt 216  Q
    |||||| |||||||||||||    
T  34062609 ggccaacccaagtgggtttt 34062628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 183
Target Start/End: Original strand, 47454578 - 47454662
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||| ||| |  ||||| ||| | |  |||||||||||| |||||| ||||||||||||||||| |||||||||    
T  47454578 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatctcaa 47454662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 51903839 - 51903919
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| ||||||||  |||  || |||||||||||| |||||  |||||||||||||||||||||||    
T  51903839 gaagaagctaaattagcccactcaaattgacaccggagagaatcgaacctgagaccacgaggaggagcacactcccagatc 51903919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 11090127 - 11090206
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||| || ||  || |||||  |||| |||||||||||| ||||||||| ||||||||||||| |||||||||    
T  11090127 aagaagctaaattaacctacttaaattgacactcgaaagaatcgaaactaagacctcgaggaggagcacattcccagatc 11090206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 175
Target Start/End: Complemental strand, 33899691 - 33899653
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| ||||||||||||||||||||||||||    
T  33899691 agaatcgaacctgagacctagaggaggagcacactccca 33899653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 20501810 - 20501738
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||||||||||| || |||| ||||||| ||||| || |||||||||||| ||||||  |||||||||||||||    
T  20501810 gaagaagctaaattagcccc-tcaaattggcactggagagaatcgaacctgagaccttaaggaggagcacactc 20501738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 216
Target Start/End: Original strand, 27093323 - 27093439
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||| ||||||| |||  ||||||| |||| ||| |||||| ||||| |||||| |||||||||||||||||||  |  ||| |  ||||| || ||    
T  27093323 gaagaagataaactaaccct-tcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactcccaagttccaagccaataccactagg 27093421  T
Q  199 ccaaaccaagtgggtttt 216  Q
    |||| |||||||||||||    
T  27093422 ccaacccaagtgggtttt 27093439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 27259276 - 27259199
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||| |||||| ||||||||||||  ||  ||| |||||| ||||| | |||| ||||||||||||||||||||    
T  27259276 gaagaagcaaaactaaccccctcaaattgacatcagagagaatcaaacctgaaacctcgaggaggagcacactcccag 27259199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 122 - 183
Target Start/End: Original strand, 31608508 - 31608569
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||| | ||| |||||| || || |||||| |||||||||||||||||||||||||||    
T  31608508 aaattagccccagagagaatcaaatctgagacctcgaggaggagcacactcccagatctcaa 31608569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 37051255 - 37051340
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaa 184  Q
    ||||||||||||||| |||||||||||  |  | ||| |||||||||||| |||| |  ||||||| |||||||||||||| ||||    
T  37051255 gaagaagctaaactaaccccctcaaatcggtgcaagagagaatcgaacctgagactttaaggaggaacacactcccagatcccaaa 37051340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 40063735 - 40063654
Alignment:
Q  99 gaagaagctaaactat-ccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||||||  |||||||||||| ||||| || |||||||||| | ||||||  |||||||||| |||| ||||||    
T  40063735 gaagaagctaaactaaaccccctcaaattggcactggagagaatcgaacttgagaccttaaggaggagcatactctcagatc 40063654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 8075088 - 8075164
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||||| | |||| |||||||||||||||||||    
T  8075088 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgaaaccttgaggaggagcacactccca 8075164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 155
Target Start/End: Original strand, 10969878 - 10969934
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacct 155  Q
    ||||||||||||||| |||||| ||||| |||| ||| |||||||||||| ||||||    
T  10969878 gaagaagctaaactaacccccttaaattggcaccagagagaatcgaacctgagacct 10969934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 16354855 - 16354968
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||||||  ||||| || || |||| ||| |||||||||||| |||||  |||||||||||||||| ||| |  ||| |  ||||| || ||    
T  16354855 gaagaagctaaacta--ccccttaatttggcaccagagagaatcgaacctgagaccctgaggaggagcacactcacaggttccaagccaataccactagg 16354952  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  16354953 ccaacccaagtgggtt 16354968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 52769944 - 52770024
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| |  |||||  ||||| | |||||||||||| ||||||  ||||||||||||||||||||||    
T  52769944 gaagaagctaaattagcccacctaaattgacactaaagagaatcgaacctgagacctcaaggaggagcacactcccagatc 52770024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 8796056 - 8796130
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| | ||| ||||||||||||  ||| |||||||||| | |||||| ||||||||||| |||||||    
T  8796056 aagaagctaaac-agcccgctcaaattagcatcagagagaatcgaacttgagaccttgaggaggagcatactccca 8796130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 132 - 179
Target Start/End: Original strand, 13808879 - 13808926
Alignment:
Q  132 tagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||| ||||| |||||| |||||||||||||||||||||| |||||||    
T  13808879 tagagagaattgaacctgagacctagaggaggagcacactgccagatc 13808926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 26505322 - 26505437
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||| ||||||| |||||| ||||| | || ||| |||||  ||||| ||| || || |||||||||||| ||| ||| ||| | |||||| ||||     
T  26505322 gaagaagttaaactaaccccctgaaattggtaccagagagaattcaacctcagatcttgaagaggagcacacttccatatcccaagcctataccactgga 26505421  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  26505422 ccaatccaagtgggtt 26505437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 214
Target Start/End: Original strand, 31788971 - 31789046
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||| ||||||| |||| ||||||||||||||||||||||| ||| |  ||| | || |||||| |||||||||||    
T  31788971 aatcaaacctaaaacctcgaggaggagcacactcccagatcccaagccaataacactaggccaacccaagtgggtt 31789046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 36720495 - 36720420
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| | ||| |  |||||  ||||||| |||||||||||| | |||| |||||||||||||||||||    
T  36720495 aagaagctaaaccagcccacctaaattgacactagagagaatcgaacctgaaacctcgaggaggagcacactccca 36720420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 171
Target Start/End: Complemental strand, 8390722 - 8390680
Alignment:
Q  129 cactagaaagaatcgaacctaagacctagaggaggagcacact 171  Q
    ||||||||||||||||| ||||||||| ||||| |||||||||    
T  8390722 cactagaaagaatcgaatctaagaccttgaggaagagcacact 8390680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 39253774 - 39253732
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| |||||| || ||||||||||||||||||||    
T  39253774 agaatcgaacctgagaccttgaagaggagcacactcccagatc 39253732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 121 - 202
Target Start/End: Complemental strand, 35415361 - 35415280
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaa 202  Q
    |||||| ||||||||||||||||||| | || ||| ||||| | |||||||| |||||| |||||  ||||| || ||||||    
T  35415361 caaattggcactagaaagaatcgaacatgagcccttgaggatgggcacactctcagatcccaaaccaataccactaggccaa 35415280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 2709492 - 2709412
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||||| | | | |||||| |||  ||| |||||| ||||||| |||| ||||||||||| ||| |||||||    
T  2709492 gaagaagctaaactaactcacccaaattggcatcagagagaatcaaacctaaaacctcgaggaggagcatacttccagatc 2709412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 9345259 - 9345295
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||||||||||  ||||||||||||||||    
T  9345259 agaatcgaacctaagacctttaggaggagcacactcc 9345295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 217
Target Start/End: Original strand, 10499108 - 10499188
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttttg 217  Q
    |||||||||||| ||||||  |||| ||||| ||||||||||| ||| |  ||||| |  |||||| ||||||||||||||    
T  10499108 agaatcgaacctgagacctcaaggaagagcagactcccagatcccaagccaataccaccaggccaacccaagtgggttttg 10499188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Complemental strand, 14186724 - 14186688
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||| |||||| |||||||||||||||||    
T  14186724 agaatcgaacctgagaccttgaggaggagcacactcc 14186688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 14339701 - 14339649
Alignment:
Q  123 aattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||| |||||||  |||||||||||| |||| | |||||||||||||||||||    
T  14339701 aattggcactagggagaatcgaacctgagacattgaggaggagcacactccca 14339649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 181
Target Start/End: Original strand, 17108897 - 17108941
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctc 181  Q
    |||||| ||||| |||||| ||||||||||||||||||| |||||    
T  17108897 agaatcaaacctgagaccttgaggaggagcacactcccacatctc 17108941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 103 - 179
Target Start/End: Original strand, 28531023 - 28531099
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||| || ||| | ||||||  ||| ||| ||||| || |||||||||| ||||||||||| |||||||||||    
T  28531023 aagctaaattagcccacccaaattgacaccagagagaattgagcctaagacctcgaggaggagcatactcccagatc 28531099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 58; Significance: 2e-24; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 23378071 - 23377994
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||||| ||||||||||||||||||||    
T  23378071 gaagaagctaaactagccccctcaaattggcactagagagaatcgaacctgagaccttgaggaggagcacactcccag 23377994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 37109312 - 37109427
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||| |||||||| |||||||||||| |||| ||| |||||||||||| |||||| |||||||||||||||||||| || ||| |  ||||| || ||    
T  37109312 gaagaaactaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 37109411  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  37109412 ccaacccaagtgggtt 37109427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 7292759 - 7292836
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||||| |||| | ||||||||||||||||||||    
T  7292759 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacctgagactttgaggaggagcacactcccag 7292836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 38869883 - 38869803
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||||| |||||||||||| |||| |||  ||||||||||| |||||| |||||||||||||||||||||||    
T  38869883 gaagaagctaaactaaccccctcaaattggcaccagagggaatcgaacctgagaccttgaggaggagcacactcccagatc 38869803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 4249292 - 4249177
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||| ||| |||||| ||||| |||||| ||||||||||||||||| | ||| ||| | |||||| || ||    
T  4249292 gaagaagctaaactaaccccctcaaattggcaccagagagaatcaaacctgagaccttgaggaggagcacactccaaaatcccaagcctataccactagg 4249193  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| | |||||||||    
T  4249192 ccaagcgaagtgggtt 4249177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 37274420 - 37274497
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| || ||| || |||||||||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  37274420 gaagaagctaaattagcccacttaaattagcaccagagagaatcgaacctaagaccttgaggaggagcacactcccag 37274497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 100 - 215
Target Start/End: Original strand, 19680750 - 19680865
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||||||||||| || ||| ||||| |||| ||| ||||||||||||||||||| ||||| |||||||||||||  || ||| |  ||||| || |||    
T  19680750 aagaagctaaactaacctccttaaattggcaccagagagaatcgaacctaagaccttgaggaagagcacactcccaagtcccaagcgaataccactaggc 19680849  T
Q  200 caaaccaagtgggttt 215  Q
    ||| ||||||||||||    
T  19680850 caatccaagtgggttt 19680865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 99 - 192
Target Start/End: Complemental strand, 24991642 - 24991546
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggag---cacactcccagatctcaaacttatacc 192  Q
    ||||||| ||||||| | |||||||||||| |||||| | |||||||||| |||||| |||||||||   |||||||||||||||||| ||||||||    
T  24991642 gaagaagttaaactaactccctcaaattagtactagagaaaatcgaacctgagaccttgaggaggagcaacacactcccagatctcaagcttatacc 24991546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 28635811 - 28635731
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| || ||| | |||||| |||| ||| |||||||||||||||||||  ||||||||||||||||||||||    
T  28635811 gaagaagctaaattagcccacccaaattggcaccagagagaatcgaacctaagacctccaggaggagcacactcccagatc 28635731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 162
Target Start/End: Complemental strand, 15180853 - 15180790
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggag 162  Q
    ||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||||| ||||||    
T  15180853 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggag 15180790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 31759619 - 31759695
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||||||  ||| ||||||| | || ||||||||||||| || |||||| |||||||||||||||||||    
T  31759619 gaagaagctaaactaatcccttcaaattggtaccagaaagaatcgaatctgagaccttgaggaggagcacactccca 31759695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 137 - 216
Target Start/End: Complemental strand, 12798761 - 12798682
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtttt 216  Q
    |||||||||||| | |||| |||||| ||||||||||||||||||||||  ||||| || || ||| |||||||||||||    
T  12798761 agaatcgaacctgaaacctcgaggagcagcacactcccagatctcaaaccaataccactcggtcaacccaagtgggtttt 12798682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 16581808 - 16581731
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| ||| |||||||| |||| ||| | ||| |||||| |||||| ||||||||||| ||||||||    
T  16581808 gaagaagctaaactaaccctctcaaattggcaccagagataatagaacctgagaccttgaggaggagcagactcccag 16581731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 2184994 - 2185070
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||||| |||||||||||| |||   || |||||||||||| |||| | ||| ||||||||||||||||    
T  2184994 aagaagctaaactaaccccctcaaattggcatcggagagaatcgaacctgagactttgagaaggagcacactcccag 2185070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 7949415 - 7949531
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| |  |||||  ||| ||| |||||||||||| |||||| ||||||||||||||||| || || ||| |  |||||||| ||    
T  7949415 gaagaagctaaattagcccacctaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccgctagg 7949514  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||  ||||||||||||    
T  7949515 ccagcccaagtgggttt 7949531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 1730450 - 1730565
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||||||  |||||||||||||||| ||| ||||| ||| || |||| | || ||||||||||||| ||| || ||| |  ||||| || ||    
T  1730450 gaagaagctaaactaatcccctcaaattagcaccagagagaatagaatctgagactttgaagaggagcacactctcaggtcccaagccaataccactagg 1730549  T
Q  199 ccaaaccaagtgggtt 214  Q
     ||| |||||||||||    
T  1730550 tcaacccaagtgggtt 1730565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 8030165 - 8030280
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||| | |||||| |||||||||||||||||||  || ||| | |||||| || ||    
T  8030165 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacttgagaccttgaggaggagcacactcccaagtcccaagcctataccactagg 8030264  T
Q  199 ccaaaccaagtgggtt 214  Q
     ||| |||||||||||    
T  8030265 gcaatccaagtgggtt 8030280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 185
Target Start/End: Original strand, 41346959 - 41347010
Alignment:
Q  134 gaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    ||||||||||||||| |||| | ||||||||||| |||||||||||||||||    
T  41346959 gaaagaatcgaacctgagacttcgaggaggagcatactcccagatctcaaac 41347010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 183
Target Start/End: Complemental strand, 8306570 - 8306516
Alignment:
Q  129 cactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||| |||||||||| |||||| | |||||||||||||||||||| ||||||    
T  8306570 cactagagagaatcgaacttaagacttcgaggaggagcacactcccaggtctcaa 8306516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 99 - 185
Target Start/End: Original strand, 30938180 - 30938266
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    ||||||||||||||| ||| |  ||||| ||| | |  |||||||||||| |||||| ||||||||||||||||| ||||| |||||    
T  30938180 gaagaagctaaactaacccacctaaattggcattggggagaatcgaacctgagacctcgaggaggagcacactccaagatcccaaac 30938266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 39509147 - 39509105
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  39509147 agaatcgaacctgagacctcgaggaggagcacactcccagatc 39509105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 164
Target Start/End: Original strand, 6666387 - 6666452
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggagga 164  Q
    ||||||||||||||| |||||||||||  |||| ||| |||||||||||| ||| || ||||||||    
T  6666387 gaagaagctaaactaaccccctcaaatgggcaccagagagaatcgaacctgagatcttgaggagga 6666452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 46295211 - 46295138
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||||| ||| | |||||| ||||  |  |||||||||||| |||||| |||||||||||||||||    
T  46295211 aagaagctaaactagcccacccaaattggcaccggggagaatcgaacctgagaccttgaggaggagcacactcc 46295138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 136 - 183
Target Start/End: Original strand, 25869575 - 25869622
Alignment:
Q  136 aagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||| |||||| | |||||||||||||||| ||||||||||    
T  25869575 aagaatcgaacataagactttgaggaggagcacactctcagatctcaa 25869622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 33632098 - 33632173
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||| ||||||| ||||||||||||  ||| ||| |||||||| |||  ||||| ||||||||||| |||||||    
T  33632098 aagaagttaaactaaccccctcaaattgacaccagagagaatcgatcctgggaccttgaggaggagcatactccca 33632173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Original strand, 2622379 - 2622433
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||| |||| ||| |||||||||||| |||| | ||||||||||||||||||||    
T  2622379 aaattggcaccagagagaatcgaacctgagacatggaggaggagcacactcccag 2622433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 8325378 - 8325424
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||||||| ||||| ||||||||||| || ||||||    
T  8325378 agaatcgaacctaagaccttgaggatgagcacactccaaggtctcaa 8325424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 21660135 - 21660189
Alignment:
Q  129 cactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||| | |||||||| | |||||| ||||| |||||||||||||||||||||    
T  21660135 cactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaa 21660189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 183
Target Start/End: Original strand, 21668899 - 21668953
Alignment:
Q  129 cactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||| | |||||||| | |||||| ||||| |||||||||||||||||||||    
T  21668899 cactagagataatcgaacttgagacctcgaggaagagcacactcccagatctcaa 21668953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 38838874 - 38838828
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||||||| ||||||||||| ||||| ||| |||||    
T  38838874 agaatcgaacctaagaccttgaggaggagcatactccaagagctcaa 38838828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Complemental strand, 40285737 - 40285659
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    |||||| ||||||| ||| |  |||||| || ||||||||||||||| | ||||||  | |||||||||||||||||||    
T  40285737 aagaagttaaactaacccacctaaattaacattagaaagaatcgaactttagacctcaaagaggagcacactcccagat 40285659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 49576893 - 49576931
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  49576893 agaatcgaacctgagaccttgaggaggagcacactccca 49576931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 172
Target Start/End: Original strand, 11592154 - 11592187
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactc 172  Q
    ||||||||||||||||| ||||||||||||||||    
T  11592154 aatcgaacctaagacctggaggaggagcacactc 11592187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 137 - 170
Target Start/End: Complemental strand, 44865411 - 44865378
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacac 170  Q
    ||||||||||||||||||| ||||||||||||||    
T  44865411 agaatcgaacctaagaccttgaggaggagcacac 44865378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 51622599 - 51622526
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||| |  ||| | |||||| |||| ||| ||| |||||||| |||||| |||||||||||||||||    
T  51622599 aagaagctaaattggcccacccaaattggcaccagagagagtcgaacctgagaccttgaggaggagcacactcc 51622526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 179
Target Start/End: Complemental strand, 7539704 - 7539625
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||| ||||||| |||| |||||||  ||  ||| |||||||||||| |||||| ||| ||||||| |||||||||||    
T  7539704 gaagaagttaaactaacccc-tcaaattgacagaagagagaatcgaacctgagaccttgagaaggagcatactcccagatc 7539625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 27372618 - 27372694
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || |||| ||||||| |||  ||| | |||||||||||||||||  | |||||||||| |||||    
T  27372618 gaagaagctaaattaaccccttcaaattggcatcagagataatcgaacctaagaccttaaagaggagcacattccca 27372694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 214
Target Start/End: Complemental strand, 31826685 - 31826609
Alignment:
Q  138 gaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||||||| | |||||| |||||||||||||||| || ||| ||| | |||||| || || ||| |||||||||||    
T  31826685 gaatcgaacttgagaccttgaggaggagcacactcgcaaatcccaagcctataccactagggcaacccaagtgggtt 31826609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 46329242 - 46329202
Alignment:
Q  136 aagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||| | |||| ||||||||||||||||||||    
T  46329242 aagaatcgaacctgataccttgaggaggagcacactcccag 46329202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 185
Target Start/End: Complemental strand, 51969110 - 51969046
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    |||||| |||| ||| ||||  |||||| | |||| ||||||||||||||||||| |||||||||    
T  51969110 caaattggcaccagagagaaatgaacctgaaaccttgaggaggagcacactcccaaatctcaaac 51969046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 6e-24; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 99 - 215
Target Start/End: Original strand, 12188264 - 12188380
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||||||| |||||||||| | | |||| |||||||||||||||||||| || ||| |  ||||| || ||    
T  12188264 gaagaagctaaactaaccccctcaaattggcactagagagaatcgaacttgaaaccttgaggaggagcacactcccaggtcccaagccaataccactagg 12188363  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  12188364 ccaacccaagtgggttt 12188380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 15951264 - 15951356
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    |||||||||||||| ||| |||||||| | || ||| ||||| |||| | |||||| ||||||||||||||||||| ||||||| ||||||||    
T  15951264 aagaagctaaactaaccctctcaaattggtaccagagagaattgaacatgagaccttgaggaggagcacactcccaaatctcaagcttatacc 15951356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 23910074 - 23910149
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| |||||||||||| |||| |||  || |||||||| |||||| ||||||||||||||||||||    
T  23910074 gaagaagctaaactaaccccctcaaattggcaccaga--gattcgaacctgagaccttgaggaggagcacactcccag 23910149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 176
Target Start/End: Original strand, 11306135 - 11306212
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| |||||||||||| |||| ||| |||||||||||| |||||| || || ||||| ||||||||    
T  11306135 gaagaagctaaactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaagatgagcatactcccag 11306212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 13330201 - 13330126
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||||| ||| |||||||| |||| ||| ||||||||| || |||||| ||||||||||  |||||||    
T  13330201 aagaagctaaactaaccctctcaaattggcacaagagagaatcgaatctgagaccttgaggaggagcttactccca 13330126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 13227157 - 13227234
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||||||||| | |||| | |||||||||||||||||||||||||| ||  ||||| |  |||||| |||||||||||    
T  13227157 agaatcgaacttgagacttcgaggaggagcacactcccagatctcataccaataccacatggccaacccaagtgggtt 13227234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 20213156 - 20213079
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||||| |||| | ||||||||||||||||||||    
T  20213156 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccag 20213079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 22107179 - 22107102
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||||| |||| | ||||||||||||||||||||    
T  22107179 gaagaagctaaattagcccacccaaattgacactagagggaatcgaacctgagacattgaggaggagcacactcccag 22107102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 218
Target Start/End: Complemental strand, 33549181 - 33549100
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttttgt 218  Q
    |||||||||||| |||||| |||||||||||||||||||| || ||| |  ||||| |  | |||| |||||||||||||||    
T  33549181 agaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccaccagaccaacccaagtgggttttgt 33549100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 176
Target Start/End: Complemental strand, 6385976 - 6385900
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||| || ||| | |||||||||||  || |||||||||||| ||||||  |||||||||||| ||||||    
T  6385976 aagaagctaaattagcccacccaaattagcaccggagagaatcgaacctgagaccttaaggaggagcacagtcccag 6385900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 14199909 - 14200001
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    ||||||||||| ||  || | ||||||  |||||||| |||||||| || |||||| |||||||||||||||||||  |||||| | ||||||    
T  14199909 aagaagctaaattagtccacccaaattgacactagaaggaatcgaatctgagaccttgaggaggagcacactcccaagtctcaagcctatacc 14200001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 134 - 177
Target Start/End: Complemental strand, 30127480 - 30127437
Alignment:
Q  134 gaaagaatcgaacctaagacctagaggaggagcacactcccaga 177  Q
    ||||||||||||||| |||||| || ||||||||||||||||||    
T  30127480 gaaagaatcgaacctgagacctcgaagaggagcacactcccaga 30127437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 24641189 - 24641231
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| | |||| |||||||||||||||||||||||    
T  24641189 agaatcgaaccttaaacctcgaggaggagcacactcccagatc 24641231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 34444917 - 34444845
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    ||||||||||| || ||| |||||| |||| | ||  |||||||||||| |||||| | ||||||||||||||    
T  34444917 aagaagctaaattagcccactcaaactagctccagggagaatcgaacctgagaccttggggaggagcacactc 34444845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 2e-23; HSPs: 33)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 18363810 - 18363696
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||| ||||||| | |||||| |||||| ||||| |||||| ||||||||||||||||||| ||||||| | |||||| || ||    
T  18363810 gaagaagctaaactaacccc-tcaaattggtactagagagaatcaaacctgagaccttgaggaggagcacactcccaaatctcaagcctataccactagg 18363712  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  18363711 ccaacccaagtgggtt 18363696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 26459371 - 26459486
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||| ||||||| |||| ||| |||||||||||| |||||| |||||||||||||||||||| || ||| |  ||||| || ||    
T  26459371 gaagaagctaaactaaccccttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccaggtcccaagccaataccactagg 26459470  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  26459471 ccaacccaagtgggtt 26459486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 29785263 - 29785355
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    |||||||||||||| |||||||||||| |||| |||||||||||||| | |||||| ||||||||||||||| ||||||| ||| | ||||||    
T  29785263 aagaagctaaactaaccccctcaaattggcaccagaaagaatcgaacatgagaccttgaggaggagcacacttccagatcccaagcctatacc 29785355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 39631959 - 39631844
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||||||||||| |||| ||| |||||||||||| |||||| ||||||||||  |||||||| || ||| |  ||||| || ||    
T  39631959 gaagaagctaaactaaccccctcaaattggcacaagagagaatcgaacctgagaccttgaggaggagcttactcccaggtcccaagccaataccactagg 39631860  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  39631859 ccaacccaagtgggtt 39631844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 100 - 216
Target Start/End: Complemental strand, 43215298 - 43215182
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||||||||||| |||||||||||| |||  ||| |||||||||||| |||||| ||||||||||||||||| || || ||| |  ||||| || | |    
T  43215298 aagaagctaaactaaccccctcaaattggcataagagagaatcgaacctgagaccttgaggaggagcacactccgaggtcccaagccaataccactagac 43215199  T
Q  200 caaaccaagtgggtttt 216  Q
    ||| |||||||||||||    
T  43215198 caacccaagtgggtttt 43215182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 17113910 - 17113833
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||| ||||||||||||||||  ||| |||||||||| | |||||| |||||| |||||||||||||    
T  17113910 gaagaagctaaactaaccccctcaaattagcatcagagagaatcgaacttgagaccttgaggagaagcacactcccag 17113833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 9608590 - 9608683
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    ||||||||||||| | || |||||||||  ||||||| |||||||||||| ||| || ||||||||| ||||||||||||| ||| | ||||||    
T  9608590 gaagaagctaaaccaacctcctcaaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatacc 9608683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 99 - 192
Target Start/End: Original strand, 9836162 - 9836255
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    ||||||||||||| | || |||||||||  ||||||| |||||||||||| ||| || ||||||||| ||||||||||||| ||| | ||||||    
T  9836162 gaagaagctaaaccaacctcctcaaattgacactagagagaatcgaacctgagatcttgaggaggaggacactcccagatcccaagcctatacc 9836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 100 - 212
Target Start/End: Original strand, 7744074 - 7744186
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    |||||||||||||  |||||||||||| |||| ||| |||||| ||||| |||||| ||||||||||| | |||||||||  || | |||||| || |||    
T  7744074 aagaagctaaactgaccccctcaaatttgcaccagagagaatcaaacctgagaccttgaggaggagcatagtcccagatcctaagcctataccactaggc 7744173  T
Q  200 caaaccaagtggg 212  Q
    ||| | |||||||    
T  7744174 caacctaagtggg 7744186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 103 - 190
Target Start/End: Complemental strand, 37094860 - 37094773
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttata 190  Q
    ||||||||||| |||| |||||||||||||||| |||||| ||  | |||||| |||||||| |||||| ||||||| ||||| ||||    
T  37094860 aagctaaactaaccccttcaaattagcactagagagaatcaaatgtgagaccttgaggaggatcacacttccagatcccaaacctata 37094773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 37162312 - 37162395
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||||||  ||||||||||| |||| ||| |||||||||| | |||||| ||| || |||||||||||| |||||||    
T  37162312 aagaagctaaactaatcccctcaaattggcaccagagagaatcgaacttgagaccttgagaagaagcacactcccaaatctcaa 37162395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 137 - 214
Target Start/End: Complemental strand, 30442565 - 30442488
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||||||||||| |||||| ||||||||||| |||||||| || ||| |  ||||| ||||||||| |||||||||||    
T  30442565 agaatcgaacctcagaccttgaggaggagcaaactcccaggtcccaagccaataccactgggccaacccaagtgggtt 30442488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 17040973 - 17041053
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| |  ||| | |||||| ||||| || |||||||||||| |||||| ||||||||||||||| |||||||    
T  17040973 gaagaagctaaattgacccacccaaattggcacttgagagaatcgaacctgagaccttgaggaggagcacacttccagatc 17041053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 179
Target Start/End: Original strand, 25655189 - 25655269
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||||||||| | |||| ||||||| |||| ||| |||||||||||| | |||| |||||||| ||||||| ||||||    
T  25655189 gaagaagctaaaccaaccccttcaaattggcaccagagagaatcgaacctgaaaccttgaggaggatcacactcacagatc 25655269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 139 - 215
Target Start/End: Original strand, 45709709 - 45709785
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||||||| |||||| |||||||||||||||| |||||| ||| || ||||| || |||||| |||| |||||||    
T  45709709 aatcgaacctgagacctcgaggaggagcacactctcagatcccaagctaataccactaggccaacccaaatgggttt 45709785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 103 - 173
Target Start/End: Original strand, 13106747 - 13106817
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||| || ||| ||||||||||||  ||| |||||||||||| |||||| ||||||||| |||||||    
T  13106747 aagctaaattagcccgctcaaattagcatcagagagaatcgaacctgagaccttgaggaggagtacactcc 13106817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 5273552 - 5273624
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||||||||||||| ||| | |||||| ||||  || | |||| |||||||||||| ||||||||||||||||    
T  5273552 aagaagctaaactagcccacccaaattggcaccggagacaatcaaacctaagaccttgaggaggagcacactc 5273624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 211
Target Start/End: Original strand, 15905635 - 15905746
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| | ||||||  || |||  |||||||||||| ||||||| ||||||||||||||||||| || ||| |  |||||||  ||    
T  15905635 gaagaagctaaattaacccacccaaattgacattagggagaatcgaacctgagaccta-aggaggagcacactcccaggtcccaagccaataccgccagg 15905733  T
Q  199 ccaaaccaagtgg 211  Q
    |||| ||||||||    
T  15905734 ccaacccaagtgg 15905746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 25590686 - 25590642
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||||  |||||| |||||||||||||||||||||||||||    
T  25590686 aatcgaacccgagacctcgaggaggagcacactcccagatctcaa 25590642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 30579450 - 30579334
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| |  ||||| |||| ||| | |||||||||| |||||| ||||||| | |||||||||| |||||| |  ||||| |  ||    
T  30579450 gaagaagctaaattagcccacctaaattggcaccagagaaaatcgaacctgagaccttgaggaggtggacactcccaggtctcaagccaataccaccagg 30579351  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  30579350 ccaacccaagtgggttt 30579334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 19553530 - 19553491
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||| ||||||||||||| ||||||||||||||||||||    
T  19553530 agaattgaacctaagaccttgaggaggagcacactcccag 19553491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 22760940 - 22760901
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  22760940 agaatcgaacctgagaccttgaggaggagcacactcccag 22760901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 214
Target Start/End: Original strand, 33869422 - 33869521
Alignment:
Q  115 ccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||||||||||  ||| ||| |||||||||||  |||||| ||| ||||||||||| |||| |||||| |  ||||  || |||||| |||||||||||    
T  33869422 ccccctcaaattgacaccagagagaatcgaaccagagaccttgagaaggagcacacttccaggtctcaagccaatactactaggccaacccaagtgggtt 33869521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 172
Target Start/End: Original strand, 38374598 - 38374633
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactc 172  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38374598 agaatcgaacctaagaccttgaggaggagcacactc 38374633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 175
Target Start/End: Original strand, 20335830 - 20335868
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| |||||| |||||||||||||||||||    
T  20335830 agaatcgaacctgagacctcgaggaggagcacactccca 20335868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 169
Target Start/End: Complemental strand, 21558243 - 21558173
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcaca 169  Q
    |||||||||||| || ||| |  ||||| |||| ||| |||||||||||| |||||| |||||||||||||    
T  21558243 gaagaagctaaattaacccacctaaattggcaccagagagaatcgaacctgagaccttgaggaggagcaca 21558173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 176
Target Start/End: Complemental strand, 23552210 - 23552156
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||| ||| |||| |||||||||| | |||||| ||||||||||||||||||||    
T  23552210 aaattggcattagagagaatcgaacttgagaccttgaggaggagcacactcccag 23552156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 2962574 - 2962501
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    ||||||| ||||||| | |||||||||| |  | ||| |||||||||||| ||| || ||||||||||||||||    
T  2962574 gaagaagttaaactaactccctcaaattggttccagagagaatcgaacctgagatcttgaggaggagcacactc 2962501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 31835306 - 31835233
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||||| ||| |  ||||| |||| ||  | |||||||||| |||||| |||||||||||||||||    
T  31835306 aagaagctaaactagcccgccaaaattggcaccagggataatcgaacctgagaccttgaggaggagcacactcc 31835233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 33222485 - 33222408
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||| |||||||| ||| ||||||||  ||| ||| |||||||||||| |||||| ||||| ||| ||||| ||||    
T  33222485 gaagaatctaaactaaccctctcaaattgacaccagagagaatcgaacctgagaccttgaggatgagtacacttccag 33222408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 175
Target Start/End: Original strand, 23301583 - 23301639
Alignment:
Q  119 ctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||||||| | |||||| ||| | ||||||  ||||||||||||||||||    
T  23301583 ctcaaattagcactaaagagaatcaaacttgagacctcaaggaggagcacactccca 23301639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 175
Target Start/End: Complemental strand, 43590998 - 43590946
Alignment:
Q  123 aattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||| |||||||  |||||||||||| |||| | |||||||||||||||||||    
T  43590998 aattggcactagggagaatcgaacctgagacattgaggaggagcacactccca 43590946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 179
Target Start/End: Complemental strand, 48772013 - 48771973
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  48772013 aatcgaacctgagacctcaaggaggagcacactcccagatc 48771973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 51; Significance: 2e-20; HSPs: 22)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 34984918 - 34984844
Alignment:
Q  102 gaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||| | |||||||||||| |||| ||| ||||||||||||||||||| ||||||||||||||||||||    
T  34984918 gaagctaaaccaaccccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagcacactcccag 34984844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 7918430 - 7918545
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||||||  ||||||||||| |||| ||| ||||||||||||||||||| |||||||||  ||||||||| |  ||| |  ||||| || ||    
T  7918430 gaagaagctaaactaaacccctcaaattggcaccagagagaatcgaacctaagaccttgaggaggagtgcactcccaggttccaagccaataccactagg 7918529  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  7918530 ccaacccaagtgggtt 7918545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 18595966 - 18596039
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||| |||||||||||| |||| ||| | ||||||||||||||||| ||||||||||||| ||||||    
T  18595966 aagctaaactaaccccctcaaattggcaccagagaaaatcgaacctaagaccttgaggaggagcacattcccag 18596039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 100 - 192
Target Start/End: Original strand, 37258328 - 37258420
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttatacc 192  Q
    |||||||||||||| ||||||||||||  ||| ||| |||||||||||| | |||| ||||||||||||||||| ||||| ||| || |||||    
T  37258328 aagaagctaaactaaccccctcaaattgacaccagagagaatcgaacctgaaaccttgaggaggagcacactcctagatcccaagctaatacc 37258420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 109 - 176
Target Start/End: Complemental strand, 14285266 - 14285199
Alignment:
Q  109 aactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||| |||||||||||| |||| ||| |||||||||||| |||||| ||||||||||||||||||||    
T  14285266 aactaaccccctcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacactcccag 14285199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 25627171 - 25627096
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||||||| |||| |||||||  ||| ||| |||||||||||| |||||| |||||||||||||||||||    
T  25627171 gaagaagctaaactaacccc-tcaaattgacaccagagagaatcgaacctgagaccttgaggaggagcacactccca 25627096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 115 - 215
Target Start/End: Original strand, 26078028 - 26078128
Alignment:
Q  115 ccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    |||||||||||| |||||||| |||||||||||| |||||| || ||| |||| |||||||  || |||||  ||||| || |||||| |||||||||||    
T  26078028 ccccctcaaattggcactagagagaatcgaacctgagaccttgaagagaagcatactcccaagtcccaaaccaataccactaggccaacccaagtgggtt 26078127  T
Q  215 t 215  Q
    |    
T  26078128 t 26078128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 43442273 - 43442225
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||||    
T  43442273 agaatcgaacctgagaccttgaggaggagcacactcccagatctcaaac 43442225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 214
Target Start/End: Original strand, 21549099 - 21549213
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||| ||||||| |||||||| | |||||||| | |||| |  ||||||||||||||||||| || ||| |  ||||| || ||    
T  21549099 gaagaagctaaactaacccc-tcaaattggcactagagaaaatcgaacttgagactttaaggaggagcacactcccaggtcccaagccaataccactagg 21549197  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  21549198 ccaacccaagtgggtt 21549213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 16773922 - 16773845
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| || ||| |  ||||| |||  ||| |||||||||||| |||||| ||||||||||||||||||||    
T  16773922 gaagaagctaaattagcccacctaaattggcatcagagagaatcgaacctgagacctcgaggaggagcacactcccag 16773845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 29075873 - 29075781
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||| |||| ||| |||||||||| | ||| || ||||||||||||||||||||||| ||| |  ||||| || ||| || |||||||||||    
T  29075873 aaattggcaccagagagaatcgaacatgagatctcgaggaggagcacactcccagatcccaagccaataccactaggcaaacccaagtgggtt 29075781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Complemental strand, 25979284 - 25979209
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||| || |||| |||||||  ||  ||| |||||||||||| |||||| ||||||||| |||||||||    
T  25979284 aagaagctaaattaaccccatcaaattgacataagagagaatcgaacctgagaccttgaggaggagaacactccca 25979209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 175
Target Start/End: Original strand, 39327053 - 39327127
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||| || ||| | |||||||| | | || ||||||||| ||||||||| |||||||||||||||||||    
T  39327053 aagaagctaaattagcccac-caaattagtattggagagaatcgaagctaagaccttgaggaggagcacactccca 39327127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 179
Target Start/End: Complemental strand, 84901 - 84859
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||| | |||||| |||||||||||||||||||||||    
T  84901 agaatcgaacttgagaccttgaggaggagcacactcccagatc 84859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 18206608 - 18206686
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    ||||||||||| || ||| | |||||| |||||||| ||| ||||| ||   ||||| |||||||||||||||||||||    
T  18206608 aagaagctaaattagcccacccaaattggcactagagagagtcgaatctggaacctaaaggaggagcacactcccagat 18206686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 103 - 169
Target Start/End: Complemental strand, 18974071 - 18974005
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcaca 169  Q
    ||||||||||| ||| |||||||| |||| ||  |||||||||||| | |||| |||||||||||||    
T  18974071 aagctaaactaacccactcaaattggcaccagggagaatcgaacctgacaccttgaggaggagcaca 18974005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 122 - 216
Target Start/End: Original strand, 22020846 - 22020940
Alignment:
Q  122 aaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtttt 216  Q
    |||||| |||| || ||||||||| || |||| |  |||||||||||||||||||||| ||| || ||||| ||  ||||| ||||| |||||||    
T  22020846 aaattaacactggagagaatcgaatctgagacttcaaggaggagcacactcccagatcccaagctaataccactatgccaacccaagagggtttt 22020940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 172
Target Start/End: Complemental strand, 28285367 - 28285294
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    |||||||||||| || ||| | ||||||  |||||||||||||||||||  | |||| ||||||||||| ||||    
T  28285367 gaagaagctaaattagcccacccaaattgacactagaaagaatcgaacccgataccttgaggaggagcaaactc 28285294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 31074346 - 31074273
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||||||  || || ||||| |||| ||| |||||||||||| ||| || |||||||| ||||||||    
T  31074346 aagaagctaaactaatcctcttaaattggcaccagagagaatcgaacctgagatcttgaggaggaacacactcc 31074273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 178
Target Start/End: Original strand, 87423 - 87463
Alignment:
Q  138 gaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    ||||| ||||| |||||| ||||||||||||||||||||||    
T  87423 gaatcaaacctgagaccttgaggaggagcacactcccagat 87463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 17028225 - 17028301
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||| |  |||||  |||||||  ||||| ||||| |||||| |||||||||||||||||||    
T  17028225 gaagaagctaaattagcccacctaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactccca 17028301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 19043572 - 19043497
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    ||||||||||||||| |||| ||||||| |||||||| || || |||||| |||| | ||| |||| ||||||||||    
T  19043572 gaagaagctaaactaacccc-tcaaattggcactagagaggattgaacctgagactttgagaaggaacacactccca 19043497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 44; Significance: 4e-16; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 18540413 - 18540298
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| |||||||| |||| ||| |||||||||||| |||||| |||||| || |||||||||| || ||| |  ||||| || ||    
T  18540413 gaagaagctaaattaaccctctcaaattggcaccagagagaatcgaacctgagaccttgaggagaagtacactcccaggtcccaagccaataccactagg 18540314  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  18540313 ccaacccaagtgggtt 18540298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 99 - 215
Target Start/End: Complemental strand, 16852455 - 16852339
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| |  ||||| ||||||   |||||||||||| |||||| |||||||||||||||||||| || ||| |  ||||| || ||    
T  16852455 gaagaagctaaaatagcccacctaaattggcactaaggagaatcgaacctgagacctcgaggaggagcacactcccaggtcccaagccaataccactagg 16852356  T
Q  199 ccaaaccaagtgggttt 215  Q
    |||| ||||||||||||    
T  16852355 ccaacccaagtgggttt 16852339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 6569733 - 6569812
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||||| ||||||||||||  ||| | | |||||||||| | | ||||| ||||||||||||||||||||||    
T  6569733 aagaagctaaactaaccccctcaaattgacaccaaagagaatcgaacatgaaacctaaaggaggagcacactcccagatc 6569812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 100 - 183
Target Start/End: Original strand, 11492035 - 11492118
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||| || ||| | ||||||  ||||  | ||||||||||||||||||| ||| |||||||||||||||||||||||    
T  11492035 aagaagctaaattagcccacccaaattgacactgaagagaatcgaacctaagacctcgagaaggagcacactcccagatctcaa 11492118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 99 - 214
Target Start/End: Complemental strand, 29431126 - 29431011
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    |||||||||||| || ||| ||||||||||||| | | |||||||||||| || |||  ||||||||||||||||||  || ||| |  |||||||  ||    
T  29431126 gaagaagctaaattagcccactcaaattagcaccaaagagaatcgaacctgaggcctcaaggaggagcacactcccaagtcccaagccaataccgccagg 29431027  T
Q  199 ccaaaccaagtgggtt 214  Q
    |||| |||||||||||    
T  29431026 ccaacccaagtgggtt 29431011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 173
Target Start/End: Original strand, 11793482 - 11793556
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||||||||||||| ||| | |||||| ||||  | ||||||| |||||||||||| |||||||||||||||||    
T  11793482 gaagaagctaaactagcccacccaaattggcaccgggaagaatcaaacctaagaccttgaggaggagcacactcc 11793556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 216
Target Start/End: Complemental strand, 12988542 - 12988426
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctggg 198  Q
    ||||||||||||||| |||| ||||||| |||| ||| || ||||||||| | |||| ||||||||||||||| |||| |  ||| |  ||||| || ||    
T  12988542 gaagaagctaaactaacccc-tcaaattggcaccagagaggatcgaacctgaaaccttgaggaggagcacacttccaggttccaagccaataccactagg 12988444  T
Q  199 ccaaaccaagtgggtttt 216  Q
    |||| |||||||||||||    
T  12988443 ccaatccaagtgggtttt 12988426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 99 - 176
Target Start/End: Complemental strand, 33017328 - 33017252
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||| ||||||| |||| ||||||| |||| ||| |||||||||||| |||||| ||||||||||||||| ||||    
T  33017328 gaagaagttaaactaacccc-tcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcacacttccag 33017252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 99 - 175
Target Start/End: Complemental strand, 11819891 - 11819815
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||||||||| |||||| |||||||||||||||||||    
T  11819891 gaagaagctaaattagcccacccaaattgacactagagtgaatcgaacctgagaccttgaggaggagcacactccca 11819815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 137 - 185
Target Start/End: Complemental strand, 36205272 - 36205224
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaac 185  Q
    |||||||||| | |||||| |||||||||||||||||||||||||||||    
T  36205272 agaatcgaacatgagaccttgaggaggagcacactcccagatctcaaac 36205224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 22193363 - 22193402
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  22193363 agaatcgaacctaagaccttgaggaggagcacactcccag 22193402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 215
Target Start/End: Original strand, 19703486 - 19703564
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||||||||| |||||| |||||||||||||||| ||| || ||| |  ||||| || |||||| ||||||||||||    
T  19703486 agaatcgaacctgagaccttgaggaggagcacactctcaggtcccaagccaataccactaggccaacccaagtgggttt 19703564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 120 - 214
Target Start/End: Original strand, 30483866 - 30483960
Alignment:
Q  120 tcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||||| |||| ||| ||||| |||||| ||||   ||||||||||||||||||| ||| ||| |  ||||| ||||||||| |||||||||||    
T  30483866 tcaaattggcacaagagagaattgaacctgagactctgaggaggagcacactcccatatcccaagccaataccactgggccaacccaagtgggtt 30483960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 214
Target Start/End: Original strand, 33727835 - 33727949
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    ||||||||||| || |||   ||||||  |||||||  ||||||||||| |||||| ||||||||||||||| |||  |||||||| |||||| || ||     
T  33727835 aagaagctaaattagcccatccaaattgacactagagggaatcgaacctgagaccttgaggaggagcacacttccaagtctcaaacctataccactaggg 33727934  T
Q  200 caaaccaagtgggtt 214  Q
    ||| |||| ||||||    
T  33727935 caacccaaatgggtt 33727949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 173
Target Start/End: Complemental strand, 26688979 - 26688906
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||||| ||| | ||||||  |||||| |||||  |||||| |||||| |||||||||||||||||    
T  26688979 aagaagctaaactagcccacccaaattgacactaggaagaactgaacctgagaccttgaggaggagcacactcc 26688906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 172
Target Start/End: Original strand, 31408084 - 31408156
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactc 172  Q
    ||||||||||| || |||||| |||||  || |||| |||||||||||| | |||| ||||||||||||||||    
T  31408084 aagaagctaaattaacccccttaaattgacattagagagaatcgaacctgaaaccttgaggaggagcacactc 31408156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 175
Target Start/End: Original strand, 44780075 - 44780151
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||||||| || ||| | ||||||  |||||||  ||||| ||||| |||||| |||||||||||||||||||    
T  44780075 gaagaagctaaattagcccacccaaattgacactagagggaatcaaacctgagaccttgaggaggagcacactccca 44780151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Complemental strand, 968439 - 968400
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  968439 agaatcgaacctgagacctcgaggaggagcacactcccag 968400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 212
Target Start/End: Complemental strand, 3624657 - 3624582
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtggg 212  Q
    |||||||||||| |||||| || ||||||||||||||||| || ||| |  ||||| || |||||| |||||||||    
T  3624657 agaatcgaacctgagaccttgaagaggagcacactcccaggtcccaagccaataccactaggccaacccaagtggg 3624582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 215
Target Start/End: Complemental strand, 18897279 - 18897165
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    ||||||||||| |||||| |  ||||| |||| || ||||||||||| | |||||| ||||||||||||||||  || || |||||  | ||| || |||    
T  18897279 aagaagctaaa-tatcccacctaaattggcaccaggaagaatcgaacatgagaccttgaggaggagcacactctaaggtcccaaaccaacaccactaggc 18897181  T
Q  200 caaaccaagtgggttt 215  Q
    ||| ||||||||||||    
T  18897180 caacccaagtgggttt 18897165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 115 - 178
Target Start/End: Original strand, 37663963 - 37664026
Alignment:
Q  115 ccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    ||||||||||||||||||||| ||||||||| |  ||||||  ||||  |||||||||||||||    
T  37663963 ccccctcaaattagcactagagagaatcgaatccgagaccttaaggaatagcacactcccagat 37664026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 173
Target Start/End: Complemental strand, 6536635 - 6536561
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcc 173  Q
    |||||||||||| || ||| |  ||||| |||| ||| ||||| |||||| |||||| |||||||||||||||||    
T  6536635 gaagaagctaaattaacccacctaaattggcaccagagagaattgaacctgagaccttgaggaggagcacactcc 6536561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 215
Target Start/End: Complemental strand, 13129761 - 13129667
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||| |||| ||| |||||||||||| | |||| |||||||||| ||||||||  || |||||  || || |||||| || ||||||||||||    
T  13129761 caaattggcaccagagagaatcgaacctgaaaccttgaggaggagcgcactcccaagtcccaaaccaatgccactgggctaacccaagtgggttt 13129667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Complemental strand, 27750815 - 27750769
Alignment:
Q  129 cactagaaagaatcgaacctaagacctagaggaggagcacactccca 175  Q
    |||||||  ||||||||||| |||||| |||||||||||||||||||    
T  27750815 cactagagggaatcgaacctgagaccttgaggaggagcacactccca 27750769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Complemental strand, 28783137 - 28783091
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||||| | |||||| |||||||||||||||||||| ||||||    
T  28783137 agaatcgaacatgagaccttgaggaggagcacactcccaggtctcaa 28783091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 35641900 - 35641946
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||||||| |||| | ||||||||||||||||||| |||||||    
T  35641900 agaatcgaacctgagacatcgaggaggagcacactcccaaatctcaa 35641946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 136 - 217
Target Start/End: Original strand, 11928729 - 11928810
Alignment:
Q  136 aagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttttg 217  Q
    ||||||||||||| |||||| ||||||||||||||| |||| |   ||||| |||||  | |||||| |||| |||||||||    
T  11928729 aagaatcgaacctgagacctcgaggaggagcacacttccaggttataaactaataccattaggccaatccaaatgggttttg 11928810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 99 - 184
Target Start/End: Original strand, 29915881 - 29915966
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaa 184  Q
    |||||||||||||||  | ||| ||||| |||||||| | |||||||  | |||||| ||||||||||  ||||||||||| ||||    
T  29915881 gaagaagctaaactaaacaccttaaattggcactagagaaaatcgaatatgagaccttgaggaggagcgtactcccagatcccaaa 29915966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 3524400 - 3524436
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcc 173  Q
    ||||| ||||||||||||| |||||||||||||||||    
T  3524400 agaattgaacctaagaccttgaggaggagcacactcc 3524436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 4830558 - 4830486
Alignment:
Q  143 gaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggttt 215  Q
    |||||| |||||| |||||||| ||||||| |||||| |||||  ||||| |  |||||| ||||||||||||    
T  4830558 gaacctgagacctcgaggaggaacacactctcagatcccaaacaaataccaccaggccaacccaagtgggttt 4830486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 28787457 - 28787529
Alignment:
Q  99 gaagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacact 171  Q
    |||||||||||||| |||| |  ||||| ||||| |  |||||| ||||| |||||| |||||||||||||||    
T  28787457 gaagaagctaaactttcccacctaaattggcactggggagaatcaaacctgagaccttgaggaggagcacact 28787529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 138 - 174
Target Start/End: Original strand, 29858049 - 29858085
Alignment:
Q  138 gaatcgaacctaagacctagaggaggagcacactccc 174  Q
    ||||||||||| |||||| ||||||||||||||||||    
T  29858049 gaatcgaacctgagacctcgaggaggagcacactccc 29858085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0299 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 179
Target Start/End: Complemental strand, 11621 - 11563
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    ||||||| ||| ||| |||||||||||| |||||| |||||||||||||||||||||||    
T  11621 caaattaacaccagagagaatcgaacctgagacctcgaggaggagcacactcccagatc 11563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 100 - 202
Target Start/End: Original strand, 2673 - 2775
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggc 199  Q
    ||||||||||| || || | ||||||| |||| ||| |||||||||||| |||||| ||||||||||| ||||| |  |||||| | ||||||||| |||    
T  2673 aagaagctaaattagcctcttcaaattggcaccagagagaatcgaacctgagaccttgaggaggagcagactcctaattctcaagcatataccgctaggc 2772  T
Q  200 caa 202  Q
    |||    
T  2773 caa 2775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 137 - 183
Target Start/End: Original strand, 13045 - 13091
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    |||||||||||| |||||| |||||||||||||||||||||||||||    
T  13045 agaatcgaacctgagaccttgaggaggagcacactcccagatctcaa 13091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0180 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 103 - 176
Target Start/End: Original strand, 19928 - 20000
Alignment:
Q  103 aagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    ||||||||||| |||| |||||||| ||| ||| |||||||||||| |||||| ||||||||||| ||||||||    
T  19928 aagctaaactaacccc-tcaaattaacaccagagagaatcgaacctgagaccttgaggaggagcatactcccag 20000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 137 - 179
Target Start/End: Original strand, 2469 - 2511
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||| |||||| |||||||||||||||||||||||    
T  2469 agaatcgaacctgagaccttgaggaggagcacactcccagatc 2511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0063 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0063
Description:

Target: scaffold0063; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 35351 - 35429
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    |||||||||||| | |||||||||||| |||  ||| | |||||||| |||||||| ||||||||||| ||||| ||||    
T  35351 aagaagctaaaccaaccccctcaaattggcatcagagataatcgaacttaagaccttgaggaggagcatactcctagat 35429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0118 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 137 - 214
Target Start/End: Original strand, 41632 - 41709
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccagatctcaaacttataccgctgggccaaaccaagtgggtt 214  Q
    ||||| |||||| |||||| ||||||||||| |||| |||||||||| |  ||||| || |||||| |||||||||||    
T  41632 agaattgaacctgagacctcgaggaggagcatactctcagatctcaagccaataccactaggccaacccaagtgggtt 41709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 137 - 176
Target Start/End: Original strand, 15322 - 15361
Alignment:
Q  137 agaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  15322 agaatcgaacctgagacctcgaggaggagcacactcccag 15361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 100 - 179
Target Start/End: Original strand, 19809 - 19888
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||||||||| ||| | ||||||| ||   ||||||||||||| | ||||||  |||||||||| |||||||||||    
T  19809 aagaagctaaactagcccacccaaattaacatcggaaagaatcgaacttgagacctcaaggaggagcagactcccagatc 19888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1367 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1367
Description:

Target: scaffold1367; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 121 - 179
Target Start/End: Original strand, 823 - 881
Alignment:
Q  121 caaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagatc 179  Q
    |||||||  |||||| |||||||||||| |||| | ||||||||||||| |||||||||    
T  823 caaattaatactagagagaatcgaacctgagacttcgaggaggagcacattcccagatc 881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 100 - 178
Target Start/End: Original strand, 81526 - 81604
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    |||||| ||||||| | |||||||||| |||  ||  ||||||||| || |||||| ||||||||||||||| ||||||    
T  81526 aagaagttaaactaactccctcaaattggcatcagggagaatcgaatctgagaccttgaggaggagcacacttccagat 81604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 156990 - 157032
Alignment:
Q  139 aatcgaacctaagacctagaggaggagcacactcccagatctcaa 183  Q
    ||||||||||  ||||| |||||||||||||||||||||||||||    
T  156990 aatcgaacct--gacctcgaggaggagcacactcccagatctcaa 157032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 100 - 176
Target Start/End: Original strand, 94935 - 95009
Alignment:
Q  100 aagaagctaaactatccccctcaaattagcactagaaagaatcgaacctaagacctagaggaggagcacactcccag 176  Q
    |||||||||||||| |||  | ||||| |||| ||| | ||| |||||| |||||| ||||||||||||||||||||    
T  94935 aagaagctaaactaaccc--ttaaattggcaccagagataattgaacctgagaccttgaggaggagcacactcccag 95009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 178
Target Start/End: Complemental strand, 93027 - 92983
Alignment:
Q  134 gaaagaatcgaacctaagacctagaggaggagcacactcccagat 178  Q
    ||||||||||||||| ||||||  ||||||| |||||||||||||    
T  93027 gaaagaatcgaacctcagacctcaaggaggatcacactcccagat 92983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University