View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8490_low_13 (Length: 414)

Name: NF8490_low_13
Description: NF8490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8490_low_13
NF8490_low_13
[»] chr4 (51 HSPs)
chr4 (1-304)||(3047546-3047848)
chr4 (1-49)||(25753594-25753642)
chr4 (1-49)||(27048397-27048445)
chr4 (1-49)||(35399246-35399294)
chr4 (1-49)||(35399405-35399453)
chr4 (1-51)||(52214682-52214732)
chr4 (1-50)||(34205981-34206030)
chr4 (1-50)||(36558454-36558503)
chr4 (1-50)||(53740249-53740298)
chr4 (366-402)||(3047911-3047947)
chr4 (1-49)||(17077133-17077181)
chr4 (1-49)||(23018537-23018585)
chr4 (1-49)||(28395244-28395292)
chr4 (1-49)||(29669352-29669400)
chr4 (1-49)||(45427241-45427289)
chr4 (1-49)||(50858079-50858127)
chr4 (1-49)||(51470550-51470598)
chr4 (7-50)||(17076928-17076971)
chr4 (1-48)||(43972422-43972469)
chr4 (3-49)||(50858394-50858440)
chr4 (1-50)||(991271-991320)
chr4 (1-50)||(29734628-29734677)
chr4 (1-49)||(990614-990662)
chr4 (1-49)||(5488434-5488482)
chr4 (1-49)||(12016672-12016720)
chr4 (1-49)||(12016880-12016928)
chr4 (1-49)||(15665220-15665268)
chr4 (1-49)||(21498598-21498646)
chr4 (1-49)||(27048126-27048174)
chr4 (1-49)||(29113516-29113564)
chr4 (1-49)||(43943740-43943788)
chr4 (1-49)||(51469548-51469596)
chr4 (5-49)||(51470715-51470759)
chr4 (1-48)||(45426926-45426973)
chr4 (1-50)||(41176773-41176823)
chr4 (3-49)||(53739935-53739981)
chr4 (4-50)||(54210447-54210493)
chr4 (1-50)||(17222655-17222704)
chr4 (1-46)||(18435918-18435963)
chr4 (1-49)||(21497671-21497720)
chr4 (1-49)||(21498254-21498303)
chr4 (1-50)||(22867151-22867200)
chr4 (1-49)||(6778665-6778713)
chr4 (1-49)||(13254450-13254498)
chr4 (1-49)||(27634315-27634363)
chr4 (1-49)||(28245855-28245903)
chr4 (1-49)||(29669667-29669715)
chr4 (1-49)||(34206244-34206292)
chr4 (2-50)||(35565146-35565193)
chr4 (1-49)||(53738197-53738245)
chr4 (3-47)||(56509678-56509722)
[»] chr3 (52 HSPs)
chr3 (1-50)||(41380790-41380839)
chr3 (1-49)||(38300272-38300320)
chr3 (1-53)||(51338388-51338440)
chr3 (1-50)||(22407429-22407478)
chr3 (1-50)||(40230423-40230472)
chr3 (1-49)||(9264075-9264123)
chr3 (1-49)||(9264282-9264330)
chr3 (1-49)||(22407637-22407685)
chr3 (1-49)||(40230628-40230676)
chr3 (1-49)||(44573706-44573754)
chr3 (1-49)||(44574003-44574051)
chr3 (1-49)||(50338371-50338419)
chr3 (1-49)||(50692390-50692438)
chr3 (1-49)||(50692593-50692641)
chr3 (1-49)||(51642417-51642465)
chr3 (1-49)||(51642624-51642672)
chr3 (1-47)||(4191113-4191159)
chr3 (1-50)||(3985840-3985889)
chr3 (1-50)||(4029632-4029681)
chr3 (4-49)||(4255807-4255852)
chr3 (4-49)||(4255989-4256034)
chr3 (1-50)||(21750542-21750591)
chr3 (1-50)||(27219396-27219445)
chr3 (1-50)||(34715443-34715492)
chr3 (1-50)||(45443347-45443396)
chr3 (1-49)||(21832188-21832236)
chr3 (1-45)||(31563996-31564040)
chr3 (2-49)||(33909821-33909869)
chr3 (1-49)||(39078760-39078808)
chr3 (1-49)||(39956663-39956711)
chr3 (5-49)||(48685301-48685345)
chr3 (1-49)||(50057096-50057144)
chr3 (1-48)||(38422050-38422097)
chr3 (4-49)||(4255580-4255625)
chr3 (4-49)||(9264489-9264534)
chr3 (1-50)||(39956455-39956504)
chr3 (1-50)||(47833641-47833690)
chr3 (1-50)||(49477601-49477650)
chr3 (1-49)||(11414430-11414478)
chr3 (1-49)||(19820517-19820565)
chr3 (5-49)||(21833595-21833639)
chr3 (1-49)||(22339808-22339856)
chr3 (1-49)||(24539221-24539269)
chr3 (1-49)||(29369858-29369906)
chr3 (1-45)||(31563692-31563736)
chr3 (1-49)||(37058760-37058808)
chr3 (1-49)||(37223642-37223690)
chr3 (1-49)||(38300741-38300789)
chr3 (1-49)||(49477394-49477442)
chr3 (1-49)||(50203846-50203894)
chr3 (9-45)||(53761391-53761427)
chr3 (1-49)||(54591454-54591502)
[»] chr8 (26 HSPs)
chr8 (1-49)||(40902382-40902430)
chr8 (1-50)||(32931468-32931517)
chr8 (1-49)||(10989023-10989071)
chr8 (1-49)||(10989230-10989278)
chr8 (1-49)||(16454624-16454672)
chr8 (1-49)||(18905923-18905971)
chr8 (1-49)||(36997233-36997281)
chr8 (1-49)||(43599378-43599426)
chr8 (1-50)||(34248426-34248475)
chr8 (1-50)||(36993935-36993984)
chr8 (1-49)||(3183900-3183948)
chr8 (1-49)||(8559648-8559696)
chr8 (1-49)||(15010810-15010858)
chr8 (1-49)||(15011018-15011066)
chr8 (1-49)||(20760649-20760697)
chr8 (1-49)||(21653394-21653442)
chr8 (1-49)||(21653871-21653919)
chr8 (5-49)||(43984305-43984349)
chr8 (1-43)||(34248144-34248186)
chr8 (3-49)||(40754513-40754559)
chr8 (1-50)||(22451415-22451464)
chr8 (1-49)||(20298505-20298553)
chr8 (1-49)||(21085137-21085185)
chr8 (1-49)||(22277591-22277639)
chr8 (1-49)||(30176453-30176501)
chr8 (1-49)||(36039783-36039831)
[»] chr5 (36 HSPs)
chr5 (1-51)||(34457370-34457420)
chr5 (1-49)||(2908758-2908806)
chr5 (1-49)||(3762973-3763021)
chr5 (1-49)||(12965235-12965283)
chr5 (1-49)||(13413651-13413699)
chr5 (1-49)||(13843764-13843812)
chr5 (1-49)||(24994136-24994184)
chr5 (1-49)||(34457163-34457211)
chr5 (1-49)||(38131831-38131879)
chr5 (1-49)||(40169030-40169078)
chr5 (7-49)||(3015406-3015448)
chr5 (1-47)||(24918228-24918274)
chr5 (1-47)||(28358026-28358072)
chr5 (1-50)||(2908550-2908599)
chr5 (1-49)||(48300-48348)
chr5 (1-49)||(873685-873733)
chr5 (1-49)||(3015610-3015658)
chr5 (1-49)||(24125129-24125177)
chr5 (1-49)||(27760142-27760190)
chr5 (1-49)||(28156097-28156145)
chr5 (1-49)||(35526977-35527025)
chr5 (1-49)||(35527263-35527311)
chr5 (1-49)||(38376798-38376846)
chr5 (1-45)||(38663314-38663358)
chr5 (1-44)||(37995628-37995671)
chr5 (3-49)||(40168848-40168894)
chr5 (1-50)||(21633505-21633554)
chr5 (1-50)||(21641752-21641801)
chr5 (1-50)||(30870873-30870922)
chr5 (1-50)||(39205653-39205701)
chr5 (1-49)||(11632498-11632546)
chr5 (1-49)||(18914357-18914405)
chr5 (1-49)||(27760442-27760490)
chr5 (1-45)||(29432479-29432523)
chr5 (1-45)||(43490209-43490253)
chr5 (1-49)||(43490452-43490500)
[»] chr6 (26 HSPs)
chr6 (1-50)||(1744830-1744879)
chr6 (1-50)||(16876818-16876867)
chr6 (1-50)||(24055097-24055146)
chr6 (1-49)||(16876999-16877047)
chr6 (1-49)||(28149860-28149908)
chr6 (1-50)||(10418326-10418375)
chr6 (1-46)||(10733430-10733475)
chr6 (1-46)||(12124889-12124934)
chr6 (1-50)||(19054560-19054609)
chr6 (1-50)||(19712392-19712441)
chr6 (1-45)||(8144084-8144128)
chr6 (1-49)||(11313371-11313419)
chr6 (1-49)||(12134472-12134520)
chr6 (1-49)||(15101100-15101148)
chr6 (1-49)||(17147894-17147942)
chr6 (1-49)||(24558855-24558903)
chr6 (1-45)||(27914319-27914363)
chr6 (6-49)||(11316915-11316958)
chr6 (1-47)||(24558650-24558696)
chr6 (4-49)||(16590254-16590299)
chr6 (4-49)||(16605081-16605126)
chr6 (5-50)||(17096686-17096731)
chr6 (1-49)||(19712598-19712646)
chr6 (2-50)||(21067045-21067093)
chr6 (2-50)||(21088836-21088884)
chr6 (1-49)||(30539302-30539350)
[»] chr2 (38 HSPs)
chr2 (1-50)||(25441763-25441812)
chr2 (1-50)||(42768322-42768371)
chr2 (1-50)||(43195851-43195900)
chr2 (1-49)||(21214190-21214238)
chr2 (1-49)||(32667250-32667298)
chr2 (1-49)||(33985760-33985808)
chr2 (1-47)||(29684078-29684124)
chr2 (1-51)||(34775424-34775474)
chr2 (1-49)||(884124-884173)
chr2 (1-50)||(901990-902039)
chr2 (1-50)||(25441914-25441963)
chr2 (1-50)||(25621273-25621322)
chr2 (1-50)||(40010041-40010090)
chr2 (1-49)||(3976460-3976508)
chr2 (1-49)||(5424771-5424819)
chr2 (1-49)||(6183355-6183403)
chr2 (1-49)||(12431965-12432013)
chr2 (1-49)||(20998978-20999026)
chr2 (1-49)||(23054393-23054441)
chr2 (1-41)||(30156275-30156315)
chr2 (1-49)||(32975318-32975366)
chr2 (1-44)||(7877911-7877954)
chr2 (1-44)||(17727471-17727514)
chr2 (4-49)||(3976992-3977037)
chr2 (1-46)||(11969119-11969164)
chr2 (1-34)||(14408056-14408089)
chr2 (1-49)||(25286248-25286297)
chr2 (1-49)||(30160394-30160443)
chr2 (1-50)||(31761398-31761447)
chr2 (1-38)||(35734859-35734896)
chr2 (13-50)||(44403929-44403966)
chr2 (1-49)||(883917-883965)
chr2 (1-49)||(3435475-3435523)
chr2 (3-47)||(10429808-10429852)
chr2 (1-49)||(16007044-16007092)
chr2 (1-49)||(29923366-29923413)
chr2 (1-49)||(31761199-31761247)
chr2 (1-37)||(37253276-37253312)
[»] chr7 (19 HSPs)
chr7 (1-49)||(1663593-1663641)
chr7 (1-49)||(6783105-6783153)
chr7 (1-49)||(23396676-23396724)
chr7 (1-49)||(41670900-41670948)
chr7 (1-50)||(43288599-43288648)
chr7 (1-49)||(1661180-1661228)
chr7 (1-49)||(28910099-28910147)
chr7 (1-49)||(28910232-28910280)
chr7 (3-50)||(23396883-23396930)
chr7 (1-47)||(257258-257304)
chr7 (1-47)||(40703402-40703448)
chr7 (1-50)||(6959954-6960003)
chr7 (1-50)||(8585158-8585207)
chr7 (1-49)||(6813272-6813320)
chr7 (1-37)||(14595882-14595918)
chr7 (1-49)||(23821665-23821713)
chr7 (1-49)||(31374832-31374880)
chr7 (1-37)||(39079637-39079673)
chr7 (5-49)||(40121607-40121651)
[»] chr1 (39 HSPs)
chr1 (1-49)||(19481381-19481429)
chr1 (1-49)||(20735589-20735637)
chr1 (1-49)||(29273055-29273103)
chr1 (1-49)||(29273214-29273262)
chr1 (1-51)||(31305778-31305828)
chr1 (1-51)||(48558308-48558358)
chr1 (1-50)||(15392171-15392220)
chr1 (1-50)||(33879766-33879815)
chr1 (1-50)||(33964440-33964489)
chr1 (1-50)||(35926236-35926285)
chr1 (1-49)||(2104250-2104297)
chr1 (1-49)||(2997045-2997093)
chr1 (1-49)||(4022114-4022162)
chr1 (5-49)||(9380971-9381015)
chr1 (1-49)||(9381166-9381214)
chr1 (4-48)||(15392095-15392139)
chr1 (1-49)||(17419854-17419902)
chr1 (1-49)||(29272896-29272944)
chr1 (1-49)||(39649073-39649121)
chr1 (1-49)||(52846838-52846886)
chr1 (1-49)||(463071-463120)
chr1 (1-50)||(13959469-13959518)
chr1 (1-50)||(15013592-15013641)
chr1 (1-34)||(19609189-19609222)
chr1 (1-50)||(26366821-26366869)
chr1 (1-50)||(35024448-35024497)
chr1 (1-50)||(43361540-43361589)
chr1 (1-50)||(45264729-45264778)
chr1 (1-49)||(2697320-2697368)
chr1 (1-49)||(8520082-8520130)
chr1 (1-41)||(11149420-11149460)
chr1 (1-49)||(15391886-15391934)
chr1 (1-49)||(19937032-19937080)
chr1 (1-49)||(20735822-20735870)
chr1 (1-49)||(21638255-21638303)
chr1 (6-46)||(22892680-22892720)
chr1 (1-49)||(37600939-37600987)
chr1 (1-49)||(43423346-43423394)
chr1 (1-49)||(45403507-45403555)
[»] scaffold0060 (2 HSPs)
scaffold0060 (1-50)||(13620-13669)
scaffold0060 (1-49)||(20607-20655)
[»] scaffold0989 (1 HSPs)
scaffold0989 (4-50)||(2935-2981)
[»] scaffold0459 (1 HSPs)
scaffold0459 (13-50)||(13377-13414)
[»] scaffold0366 (2 HSPs)
scaffold0366 (13-50)||(11018-11055)
scaffold0366 (13-50)||(14684-14721)
[»] scaffold0029 (1 HSPs)
scaffold0029 (1-50)||(76919-76968)
[»] scaffold0729 (1 HSPs)
scaffold0729 (1-49)||(2543-2591)
[»] scaffold0434 (1 HSPs)
scaffold0434 (1-49)||(13373-13421)
[»] scaffold0419 (1 HSPs)
scaffold0419 (1-49)||(4228-4276)


Alignment Details
Target: chr4 (Bit Score: 264; Significance: 1e-147; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 1 - 304
Target Start/End: Original strand, 3047546 - 3047848
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaaggatatctatcaaacaagttctttctttctcactttcgaaaaattaacat 100  Q
    |||||| ||| | |||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  3047546 accttataagtcagttttgtaaggttaagttagatcccaaatttcaacaagggtatctatcaaacaagttctttctttctcactttcgaaaaattaacat 3047645  T
Q  101 tatttagacattgggaatttaaaaattcaacagctttgaaacaaaattaaaaggctaaaacatcaaagtatggagtgtgagtgacatctaacaaaaggaa 200  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3047646 aatttagacattgggaatttaaaaattcaacagctttgaaacaaaattaaa-ggctaaaacatcaaagtatggagtgtgagtgacatctaacaaaaggaa 3047744  T
Q  201 ttagaaaaggaattatggctatacaacaatcatttgtacgaccaaaaacaagaatttggaaaccatacttcctctttcggcaagctcacatgattacttt 300  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  3047745 ttagaaaaagaattatggctatacaacaatcatttgtacgaccaaaaacaagaatttggaaactatacttcctctttcggcaagctcacatgattacttt 3047844  T
Q  301 tccg 304  Q
    ||||    
T  3047845 tccg 3047848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25753642 - 25753594
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  25753642 accttacaagccggttttgtaaggatgagttaggtcccaaatttcaaca 25753594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27048445 - 27048397
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  27048445 accttacaagccggttttgtaaggatgagttaggtcccaaatttcaaca 27048397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35399294 - 35399246
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35399294 accttacaagccggttttgtaaggttgagttaggccccaaatttcaaca 35399246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35399453 - 35399405
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| ||||||| ||||||||||||||    
T  35399453 accttacaagccggttttgtaaggttgagttaggccccaaatttcaaca 35399405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 52214682 - 52214732
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaag 51  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  52214682 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaag 52214732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34206030 - 34205981
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | |||||||||||||||||||||||    
T  34206030 accttacaagctggttttgtaaggatgagttaggtcccaaatttcaacaa 34205981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36558503 - 36558454
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  36558503 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 36558454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 53740249 - 53740298
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  53740249 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 53740298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 366 - 402
Target Start/End: Original strand, 3047911 - 3047947
Alignment:
Q  366 gacaaagcataattgcttgagttgagtatgtccttct 402  Q
    |||||||||||||||||||||||||||||||||||||    
T  3047911 gacaaagcataattgcttgagttgagtatgtccttct 3047947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17077181 - 17077133
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||||| ||||||| ||||||||||||||    
T  17077181 accttgcaagccggttttgtaaggttgagttaggccccaaatttcaaca 17077133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23018537 - 23018585
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  23018537 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 23018585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28395244 - 28395292
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  28395244 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 28395292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29669400 - 29669352
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  29669400 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29669352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 45427289 - 45427241
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  45427289 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 45427241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50858079 - 50858127
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  50858079 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50858127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51470550 - 51470598
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  51470550 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51470598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 7 - 50
Target Start/End: Complemental strand, 17076971 - 17076928
Alignment:
Q  7 caagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||| ||||||| |||||||||||||||    
T  17076971 caagccggttttgtaaggttgagttaggccccaaatttcaacaa 17076928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 43972422 - 43972469
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaac 48  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||    
T  43972422 accttacaagccggttttgtaaggatgagttaggccccaaatttcaac 43972469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 50858394 - 50858440
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||| | ||||||| ||||||||||||||    
T  50858394 cttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50858440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 991271 - 991320
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||  |||||||||||||||    
T  991271 accttacaagccggttttgtaaggatgagttagaccccaaatttcaacaa 991320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 29734628 - 29734677
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | |||| || |||||||||||||||    
T  29734628 accttacaagccggttttgtaaggatgagttgggccccaaatttcaacaa 29734677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 990614 - 990662
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  990614 accttacaagtcggttttgtaaggatgagttaggccccaaatttcaaca 990662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 5488434 - 5488482
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||||    
T  5488434 accttacaagccggttttgtaaggatgagttaggcctcaaatttcaaca 5488482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12016720 - 12016672
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  12016720 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 12016672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12016928 - 12016880
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  12016928 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 12016880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15665220 - 15665268
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||||    
T  15665220 accttacaagccggttttgtaaggatgagttaggcctcaaatttcaaca 15665268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21498598 - 21498646
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  21498598 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 21498646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27048174 - 27048126
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||| | ||||||| ||||||||||||||    
T  27048174 accttgcaagccggttttgtaaggatgagttaggccccaaatttcaaca 27048126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29113516 - 29113564
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  29113516 accttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 29113564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43943740 - 43943788
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  43943740 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 43943788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51469548 - 51469596
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||| ||||||| | ||||||| ||||||||||||||    
T  51469548 accttacaagccggttgtgtaaggatgagttaggccccaaatttcaaca 51469596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 51470715 - 51470759
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||    
T  51470715 tacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51470759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 45426973 - 45426926
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaac 48  Q
    |||||||||| ||||||||||||| | ||||||| |||||||||||||    
T  45426973 accttacaagtcggttttgtaaggatgagttaggccccaaatttcaac 45426926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41176773 - 41176823
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||||    
T  41176773 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaacaa 41176823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 53739935 - 53739981
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||| | | ||||| ||||||||||||||    
T  53739935 cttacaagccggttttgtaaggatgatttaggccccaaatttcaaca 53739981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Original strand, 54210447 - 54210493
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||| | ||||||| |||||||| ||||||    
T  54210447 ttacaagccggttttgtaaggatgagttaggccccaaattacaacaa 54210493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 17222704 - 17222655
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||| ||||||||||||||||||| |  |||||| |||||||||||||||    
T  17222704 acctcacaagccggttttgtaaggatgtgttaggccccaaatttcaacaa 17222655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 18435963 - 18435918
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttca 46  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||    
T  18435963 accttacaagccggttttgtaaggatgtgttaggccccaaatttca 18435918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21497720 - 21497671
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  21497720 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 21497671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21498254 - 21498303
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  21498254 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 21498303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22867151 - 22867200
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||  ||||  |||||| |||||||||||||||    
T  22867151 accttacaagccggttttgtggggttgtgttaggccccaaatttcaacaa 22867200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6778713 - 6778665
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||||||    
T  6778713 acctcacaagccggttttgtaaggttgagttagacctcaaatttcaaca 6778665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13254450 - 13254498
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||  | ||||||| ||||||||||||||    
T  13254450 accttacaacccggttttgtaagcatgagttaggccccaaatttcaaca 13254498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 27634363 - 27634315
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||| |||||||||| | ||||||| |||||||| |||||    
T  27634363 accttacaagccgattttgtaaggatgagttaggccccaaattacaaca 27634315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28245855 - 28245903
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||| | ||||||| ||| ||||||||||    
T  28245855 accttgcaagccggttttgtaaggatgagttaggcccccaatttcaaca 28245903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29669715 - 29669667
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |||||   ||||||||||||||    
T  29669715 accttacaagccggttttgtaaggatgagttaaaccccaaatttcaaca 29669667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 34206292 - 34206244
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||| |||||| | ||||||| ||||||| ||||||    
T  34206292 accttacaagccggtttcgtaaggatgagttaggccccaaatctcaaca 34206244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Original strand, 35565146 - 35565193
Alignment:
Q  2 ccttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||||| | ||||||| | |||||||||||||    
T  35565146 ccttacaagccggttttgtaaggatgagttagg-ctcaaatttcaacaa 35565193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 53738245 - 53738197
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | | ||||| ||||||||||||||    
T  53738245 accttacaagccagttttgtaaggatgacttaggccccaaatttcaaca 53738197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 56509678 - 56509722
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    ||||||||||||||||||| || | ||||||| ||||||||||||    
T  56509678 cttacaagccggttttgtacggatgagttaggccccaaatttcaa 56509722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 41380790 - 41380839
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||    
T  41380790 accttacaagccggttttgtaaggttgagttaggccccaaatttcaacaa 41380839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38300320 - 38300272
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||||||||||||||||||    
T  38300320 accttacaagccggttttgtaaggatgagttaggtcccaaatttcaaca 38300272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51338440 - 51338388
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaagga 53  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||||    
T  51338440 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaagga 51338388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 22407478 - 22407429
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  22407478 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 22407429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 40230472 - 40230423
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||| |||||||||||||||||| ||||||| |||||||||||||||    
T  40230472 accttacgagccggttttgtaaggttgagttaggccccaaatttcaacaa 40230423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9264123 - 9264075
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  9264123 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 9264075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 9264330 - 9264282
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  9264330 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 9264282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 22407685 - 22407637
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  22407685 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 22407637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40230676 - 40230628
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| ||||| | ||||||||||||||    
T  40230676 accttacaagccggttttgtaaggttgagttaagccccaaatttcaaca 40230628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44573706 - 44573754
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  44573706 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 44573754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44574003 - 44574051
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  44574003 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 44574051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50338419 - 50338371
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| ||||||  ||||||||||||||    
T  50338419 accttacaagccggttttgtaaggttgagttagaccccaaatttcaaca 50338371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50692390 - 50692438
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  50692390 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50692438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50692593 - 50692641
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  50692593 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 50692641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51642465 - 51642417
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  51642465 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51642417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 51642672 - 51642624
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  51642672 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 51642624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4191159 - 4191113
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||    
T  4191159 accttacaagccggttttgtaaggatgagttaggccccaaatttcaa 4191113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 3985840 - 3985889
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||| ||||||||    
T  3985840 accttacaagccggttttgtaaggatgagttaggccccaaacttcaacaa 3985889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 4029681 - 4029632
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||| |||||||||||||| | ||||||| |||||||||||||||    
T  4029681 accttacaaaccggttttgtaaggatgagttaggccccaaatttcaacaa 4029632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4255807 - 4255852
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||    
T  4255807 ttacaagccggttttgtaaggatgagttaggacccaaatttcaaca 4255852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4255989 - 4256034
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||| ||||||||||||||    
T  4255989 ttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 4256034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 21750542 - 21750591
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| ||||||||||| | ||||||| |||||||||||||||    
T  21750542 accttacaagccagttttgtaaggatgagttaggccccaaatttcaacaa 21750591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 27219396 - 27219445
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| ||| ||| | |||||||||||||||    
T  27219396 accttacaagccggttttgtaaggataacttatgccccaaatttcaacaa 27219445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 34715492 - 34715443
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||| | |||||||||||||||    
T  34715492 accttacaagccggttttgtaaggatgagttatgccccaaatttcaacaa 34715443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45443347 - 45443396
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||| ||||| | ||||||| |||||||||||||||    
T  45443347 accttacaagccggttttttaaggatgagttaggccccaaatttcaacaa 45443396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21832236 - 21832188
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||||||||    
T  21832236 acctcacaagccggttttgtaaggatgagttaggccccaaatttcaaca 21832188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31564040 - 31563996
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||||| ||| ||||||| ||||||||||    
T  31564040 accttacaagccggttttgtaaagttgagttaggccccaaatttc 31563996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Complemental strand, 33909869 - 33909821
Alignment:
Q  2 ccttacaagccggttttgtaaggttaagttagg-tcccaaatttcaaca 49  Q
    ||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  33909869 ccttacaagccggttttgtaaggatgagttaggctcccaaatttcaaca 33909821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39078808 - 39078760
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  39078808 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 39078760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39956711 - 39956663
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||    
T  39956711 accttacaagccggttttgtaaggatgagttaggctccaaatttcaaca 39956663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 48685345 - 48685301
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||    
T  48685345 tacaagccggttttgtaaggatgagttaggccccaaatttcaaca 48685301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 50057096 - 50057144
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  50057096 accttacaagccagttttgtaaggatgagttaggccccaaatttcaaca 50057144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 38422050 - 38422097
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaac 48  Q
    ||||||||||||| |||||||||||| ||||||  |||||||||||||    
T  38422050 accttacaagccgattttgtaaggttgagttagaccccaaatttcaac 38422097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 4255580 - 4255625
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||| |||| | ||||||| ||||||||||||||    
T  4255580 ttacaagccggttttgcaaggatgagttaggccccaaatttcaaca 4255625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 9264534 - 9264489
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||| |||||||| |||||    
T  9264534 ttacaagccggttttgtaaggatgagttaggccccaaattacaaca 9264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39956504 - 39956455
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| ||||||||||| | | ||||| |||||||||||||||    
T  39956504 accttacaagccagttttgtaaggatgaattaggccccaaatttcaacaa 39956455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 47833690 - 47833641
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | | ||||| |||||||||||||||    
T  47833690 accttacaagctggttttgtaaggatgatttaggccccaaatttcaacaa 47833641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 49477601 - 49477650
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| ||||| || ||||||    
T  49477601 accttacaagccggttttgtaaggatgagttaggccccaatttacaacaa 49477650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11414430 - 11414478
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||| ||||||||||||||||| | ||||||| | ||||||||||||    
T  11414430 accttagaagccggttttgtaaggatgagttaggcctcaaatttcaaca 11414478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19820565 - 19820517
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||| | ||||||| | ||||||||||||    
T  19820565 accttacaaaccggttttgtaaggatgagttaggcctcaaatttcaaca 19820517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 21833595 - 21833639
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||| |||||| | ||||||| ||||||||||||||    
T  21833595 tacaagccggtttcgtaaggatgagttaggccccaaatttcaaca 21833639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22339808 - 22339856
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||| ||||||||||||| | ||||||| ||| ||||||||||    
T  22339808 accttacaagtcggttttgtaaggatgagttaggcccccaatttcaaca 22339856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24539221 - 24539269
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||| |||||||||| | ||||||| |||||| |||||||    
T  24539221 accttacaagccgattttgtaaggatgagttaggccccaaacttcaaca 24539269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29369858 - 29369906
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||| |||||| | ||||||| ||| ||||||||||    
T  29369858 accttacaagccggtttagtaaggatgagttaggccccgaatttcaaca 29369906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 31563736 - 31563692
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||| ||||||||||||||||||| ||||||  ||||||||||    
T  31563736 accttagaagccggttttgtaaggttgagttagcccccaaatttc 31563692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 37058808 - 37058760
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||| | ||||||| || |||||||||||    
T  37058808 accttacaaaccggttttgtaaggatgagttaggcccaaaatttcaaca 37058760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37223642 - 37223690
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||||||   |||||||  |||||||||||||    
T  37223642 accttacaagccggttttgtaaggaagagttaggctccaaatttcaaca 37223690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 38300789 - 38300741
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| || | ||||||| | ||||||||||||    
T  38300789 accttacaagccggttttgtacggatgagttaggcctcaaatttcaaca 38300741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 49477394 - 49477442
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||| || |||||    
T  49477394 accttacaagccggttttgtaaggatgagttaggccccaatttacaaca 49477442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 50203894 - 50203846
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||| || |||||||||||||| | ||||||| ||||||||||||||    
T  50203894 accttataaaccggttttgtaaggatgagttaggccccaaatttcaaca 50203846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 9 - 45
Target Start/End: Complemental strand, 53761427 - 53761391
Alignment:
Q  9 agccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||| ||||||| ||||||||||    
T  53761427 agccggttttgtaaggttgagttaggccccaaatttc 53761391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 54591502 - 54591454
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||  | ||||||  ||||||||||||||    
T  54591502 accttacaagccggttttgtaagcatgagttagaccccaaatttcaaca 54591454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40902430 - 40902382
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  40902430 accttacaagccggttttgtaaggataagttaggccccaaatttcaaca 40902382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 32931468 - 32931517
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  32931468 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 32931517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10989071 - 10989023
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  10989071 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 10989023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 10989278 - 10989230
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  10989278 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 10989230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16454672 - 16454624
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  16454672 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 16454624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 18905923 - 18905971
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  18905923 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 18905971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 36997233 - 36997281
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  36997233 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 36997281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43599378 - 43599426
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  43599378 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 43599426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 34248426 - 34248475
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||| ||||    
T  34248426 accttacaagccggttttgtaaggatgagttaggccccaaatttctacaa 34248475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36993984 - 36993935
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| | |||||||||||||    
T  36993984 accttacaagccggttttgtaaggatgagttaggcctcaaatttcaacaa 36993935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3183948 - 3183900
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||| | | ||||||| ||||||||||||||    
T  3183948 accttacaagccggttttgtaacgatgagttaggccccaaatttcaaca 3183900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 8559648 - 8559696
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  8559648 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 8559696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15010858 - 15010810
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||| ||||| | ||||||| ||||||||||||||    
T  15010858 accttacaagccggttttataaggatgagttaggccccaaatttcaaca 15010810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15011066 - 15011018
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  15011066 accttacaagccggttttgtaaggatgagttaagccccaaatttcaaca 15011018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20760697 - 20760649
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||| | ||||||| ||||||||||||||    
T  20760697 accttacaaaccggttttgtaaggatgagttaggccccaaatttcaaca 20760649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21653394 - 21653442
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||    
T  21653394 accttacaagccggttttgtaaggatgagttaggctccaaatttcaaca 21653442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 21653871 - 21653919
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  21653871 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 21653919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 43984349 - 43984305
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||    
T  43984349 tacaagccggttttgtaaggatgagttaggccccaaatttcaaca 43984305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 34248144 - 34248186
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatt 43  Q
    |||||||||||||||||||||||| | ||||||| ||||||||    
T  34248144 accttacaagccggttttgtaaggatgagttaggccccaaatt 34248186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Original strand, 40754513 - 40754559
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||| | ||||||||| ||||||||||||||    
T  40754513 cttacaagctggttttgtaaagataagttaggccccaaatttcaaca 40754559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 22451415 - 22451464
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||| ||||||||||||||||||| | ||||| | |||||||||||||||    
T  22451415 acctcacaagccggttttgtaaggatgagttatgccccaaatttcaacaa 22451464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20298553 - 20298505
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||| | | ||||||| ||||||||||||||    
T  20298553 accttacaagctggttttgtaatgatgagttaggccccaaatttcaaca 20298505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21085185 - 21085137
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||| | | ||||||| ||||||||||||||    
T  21085185 accttacaagctggttttgtaatgatgagttaggccccaaatttcaaca 21085137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 22277591 - 22277639
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |||||   ||||||||||||||    
T  22277591 accttacaagccggttttgtaaggatgagttaatccccaaatttcaaca 22277639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 30176501 - 30176453
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||| | ||||||| ||| ||||||||||    
T  30176501 acctcacaagccggttttgtaaggatgagttaggccccgaatttcaaca 30176453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 36039831 - 36039783
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||| | ||||||  ||||||||||||||    
T  36039831 acctcacaagccggttttgtaaggatgagttagaccccaaatttcaaca 36039783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000006; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34457370 - 34457420
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaag 51  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||||    
T  34457370 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaag 34457420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2908806 - 2908758
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  2908806 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 2908758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 3762973 - 3763021
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  3762973 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 3763021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12965283 - 12965235
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  12965283 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 12965235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13413651 - 13413699
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  13413651 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 13413699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13843764 - 13843812
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  13843764 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 13843812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24994136 - 24994184
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  24994136 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 24994184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 34457163 - 34457211
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  34457163 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 34457211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38131831 - 38131879
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  38131831 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 38131879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 40169078 - 40169030
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  40169078 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 40169030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 7 - 49
Target Start/End: Complemental strand, 3015448 - 3015406
Alignment:
Q  7 caagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| ||||||| ||||||||||||||    
T  3015448 caagccggttttgtaaggttgagttaggccccaaatttcaaca 3015406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24918228 - 24918274
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||    
T  24918228 accttacaagccggttttgtaaggatgagttaggccccaaatttcaa 24918274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28358072 - 28358026
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||    
T  28358072 accttacaagccggttttgtaaggatgagttaggccccaaatttcaa 28358026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 2908599 - 2908550
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | |||||| ||||||||||| ||||    
T  2908599 accttacaagccggttttgtaaggatgagttagatcccaaatttcgacaa 2908550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 48348 - 48300
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  48348 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 48300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 873733 - 873685
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  873733 accttacaagcaggttttgtaaggatgagttaggccccaaatttcaaca 873685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3015658 - 3015610
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||||| ||||||| || |||||||||||    
T  3015658 accttgcaagccggttttgtaaggttgagttaggccctaaatttcaaca 3015610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24125129 - 24125177
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  24125129 accttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 24125177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27760142 - 27760190
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| ||||| | | ||||||||||||    
T  27760142 accttacaagccggttttgtaaggttgagttaagcctcaaatttcaaca 27760190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28156097 - 28156145
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | | ||||| ||||||||||||||    
T  28156097 accttacaagccggttttgtaaggatgaattaggccccaaatttcaaca 28156145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35527025 - 35526977
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  35527025 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 35526977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 35527311 - 35527263
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  35527311 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 35527263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 38376798 - 38376846
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  38376798 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 38376846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38663314 - 38663358
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||    
T  38663314 accttacaagccggttttgtaaggatgagttaggccccaaatttc 38663358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 37995671 - 37995628
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaattt 44  Q
    |||||||||||||||||||||||| | ||||||| |||||||||    
T  37995671 accttacaagccggttttgtaaggatgagttaggccccaaattt 37995628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 3 - 49
Target Start/End: Complemental strand, 40168894 - 40168848
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  40168894 cttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 40168848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21633554 - 21633505
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||| |||||||||||||||| ||||||| ||| ||||| |||||    
T  21633554 accttacaaaccggttttgtaaggttgagttaggcccccaattttaacaa 21633505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 21641801 - 21641752
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||| |||||||||||||||| ||||||| ||| ||||| |||||    
T  21641801 accttacaaaccggttttgtaaggttgagttaggcccccaattttaacaa 21641752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 30870922 - 30870873
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||| ||||||||||| ||||||| ||||| || ||||||||||||||    
T  30870922 accttataagccggttttataaggttgagttaagttccaaatttcaacaa 30870873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 39205701 - 39205653
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||| ||||||||||||||||| | ||||||| |||||||||||||||    
T  39205701 accttaaaagccggttttgtaaggatgagttagg-cccaaatttcaacaa 39205653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 11632498 - 11632546
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||| ||||||||||||||||| | |||| || ||||||||||||||    
T  11632498 accttataagccggttttgtaaggatgagttgggccccaaatttcaaca 11632546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18914405 - 18914357
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||  | ||||||| ||||||||||||||    
T  18914405 accttacaagctggttttgtaagaatgagttaggccccaaatttcaaca 18914357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 27760442 - 27760490
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||| | ||||||  ||||||||||||||    
T  27760442 accttccaagccggttttgtaaggatgagttagaccccaaatttcaaca 27760490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 29432479 - 29432523
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||    
T  29432479 accttacaagccggttttgtaaggatgagttaggccacaaatttc 29432523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 43490253 - 43490209
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||| ||| | ||||||| ||||||||||    
T  43490253 accttacaagccggttttgtgaggatgagttaggccccaaatttc 43490209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 43490500 - 43490452
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||| |||||||||||||||||| | ||||||| ||| ||||||||||    
T  43490500 accttccaagccggttttgtaaggatgagttaggcccccaatttcaaca 43490452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 38; Significance: 0.000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 1744879 - 1744830
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  1744879 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 1744830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 16876867 - 16876818
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  16876867 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 16876818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 24055146 - 24055097
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  24055146 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 24055097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 16877047 - 16876999
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  16877047 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 16876999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28149860 - 28149908
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  28149860 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 28149908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 10418375 - 10418326
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||| ||||||    
T  10418375 accttacaagccggttttgtaaggatgagttaggccccaaattccaacaa 10418326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10733475 - 10733430
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttca 46  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||    
T  10733475 accttacaagccggttttgtaaggatgagttaggccccaaatttca 10733430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12124934 - 12124889
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttca 46  Q
    |||||||||| ||||||||||||| ||||||||| |||||||||||    
T  12124934 accttacaagtcggttttgtaaggataagttaggccccaaatttca 12124889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 19054560 - 19054609
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||  |||||||||||||||    
T  19054560 accttacaagccggttttgtaaggatgagttagtccccaaatttcaacaa 19054609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 19712441 - 19712392
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||| |||||||||| | ||||||| |||||||||||||||    
T  19712441 accttacaagccgattttgtaaggatgagttaggccccaaatttcaacaa 19712392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 8144084 - 8144128
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||    
T  8144084 accttacaagccggttttgtaaggatgagttaggccccaaatttc 8144128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 11313419 - 11313371
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  11313419 accttacaagccagttttgtaaggatgagttaggccccaaatttcaaca 11313371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 12134520 - 12134472
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||| | ||||||| ||||||||||||||    
T  12134520 accttacaaaccggttttgtaaggatgagttaggccccaaatttcaaca 12134472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 15101148 - 15101100
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  15101148 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 15101100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 17147942 - 17147894
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||||    
T  17147942 accttacaagccggttttgtaaggatgagttaggccacaaatttcaaca 17147894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 24558855 - 24558903
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| ||||||||||||||    
T  24558855 accttacaagctggttttgtaaggatgagttaggccccaaatttcaaca 24558903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 27914363 - 27914319
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttc 45  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||    
T  27914363 accttacaagccggttttgtaaggatgagttaggccccaaatttc 27914319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 6 - 49
Target Start/End: Original strand, 11316915 - 11316958
Alignment:
Q  6 acaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||||    
T  11316915 acaagccggttttgtaaggttgagttaggcccccaatttcaaca 11316958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24558650 - 24558696
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||| ||| | ||||||| ||||||||||||    
T  24558650 accttacaagccggttttgtgaggatgagttaggccccaaatttcaa 24558696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Original strand, 16590254 - 16590299
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||  ||||||||||||||    
T  16590254 ttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 16590299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 16605126 - 16605081
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||  ||||||||||||||    
T  16605126 ttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 16605081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 5 - 50
Target Start/End: Complemental strand, 17096731 - 17096686
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||| | ||||||  |||||||||||||||    
T  17096731 tacaagccggttttgtaaggatgagttagaccccaaatttcaacaa 17096686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19712646 - 19712598
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||    
T  19712646 accttacaagctggttttgtaaggatgagttaggccccaaattacaaca 19712598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 21067093 - 21067045
Alignment:
Q  2 ccttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||| | |  |||||| |||||||||||||||    
T  21067093 ccttacaagccggttttgtaaagatgtgttaggccccaaatttcaacaa 21067045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 21088884 - 21088836
Alignment:
Q  2 ccttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||| | |  |||||| |||||||||||||||    
T  21088884 ccttacaagccggttttgtaaagatgtgttaggccccaaatttcaacaa 21088836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30539302 - 30539350
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |  |||| ||||||||||||||    
T  30539302 accttacaagccggttttgtaaggatgaactaggccccaaatttcaaca 30539350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 38; Significance: 0.000000000002; HSPs: 38)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25441763 - 25441812
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  25441763 accttacaagccggttttgtaaggatgagttaggacccaaatttcaacaa 25441812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 42768371 - 42768322
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  42768371 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 42768322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43195851 - 43195900
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||||||||    
T  43195851 accttacaagccggttttgtaaggatgagttaggccccaaatttcaacaa 43195900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21214238 - 21214190
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  21214238 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 21214190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32667250 - 32667298
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  32667250 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 32667298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33985808 - 33985760
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  33985808 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 33985760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29684078 - 29684124
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||||||| ||||||||  ||||||||||||    
T  29684078 accttacaagccggttttgtaaggataagttagaacccaaatttcaa 29684124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34775424 - 34775474
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaag 51  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||||    
T  34775424 accttacaagccggttttgtaaggatgagttaggcccccaatttcaacaag 34775474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 884124 - 884173
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttagg-tcccaaatttcaaca 49  Q
    |||||||||||||||||||||||||| |||||||  ||||||||||||||    
T  884124 accttacaagccggttttgtaaggttgagttaggcccccaaatttcaaca 884173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 901990 - 902039
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||| ||||    
T  901990 accttacaagccggttttgtaaggatgagttaggccccaaatttctacaa 902039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 25441914 - 25441963
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||||    
T  25441914 accttacaagccggttttgtaaggacgagttaggacccaaatttcaacaa 25441963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 25621322 - 25621273
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  25621322 accttacaagccggttttgtaaggatgagttaggcccccaatttcaacaa 25621273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 40010041 - 40010090
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| |  |||||| |||||||||||||||    
T  40010041 accttacaagccggttttgtaaggatgtgttaggccccaaatttcaacaa 40010090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3976508 - 3976460
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| |||||||| |||||    
T  3976508 accttacaagccggttttgtaaggatgagttaggccccaaattacaaca 3976460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5424819 - 5424771
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  5424819 accttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 5424771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6183403 - 6183355
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  6183403 accttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 6183355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 12431965 - 12432013
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | || |||| ||||||||||||||    
T  12431965 accttacaagccggttttgtaaggatgagctaggccccaaatttcaaca 12432013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 20999026 - 20998978
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||||||||    
T  20999026 accttacaagccggttttgtaaggatgagttaggcccccaatttcaaca 20998978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23054393 - 23054441
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||| ||||||||||||| | ||||||| ||||||||||||||    
T  23054393 accttacaagacggttttgtaaggatgagttaggccccaaatttcaaca 23054441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30156275 - 30156315
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaa 41  Q
    |||||||||||||||||||||||| ||||||||| ||||||    
T  30156275 accttacaagccggttttgtaaggataagttaggccccaaa 30156315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 32975318 - 32975366
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | |||| |||||||||||||||||    
T  32975318 accttacaagccagttttgtaaggatgagtttggtcccaaatttcaaca 32975366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 7877911 - 7877954
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaattt 44  Q
    |||||||||||||||||||||||| | | |||||||||||||||    
T  7877911 accttacaagccggttttgtaaggatgaattaggtcccaaattt 7877954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 17727471 - 17727514
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaattt 44  Q
    |||||||||||||||||||||||| | ||||||| |||||||||    
T  17727471 accttacaagccggttttgtaaggatgagttaggccccaaattt 17727514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 3977037 - 3976992
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||| | ||||||| |||||||| |||||    
T  3977037 ttacaagccggttttgtaaggatgagttaggccccaaattacaaca 3976992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11969119 - 11969164
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttca 46  Q
    |||||||||||||||||||||||| | ||||||| || ||||||||    
T  11969119 accttacaagccggttttgtaaggatgagttaggcccaaaatttca 11969164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 14408056 - 14408089
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttagg 34  Q
    |||||||||||||||||||||||||| |||||||    
T  14408056 accttacaagccggttttgtaaggttgagttagg 14408089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25286297 - 25286248
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  25286297 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 25286248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 30160394 - 30160443
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  30160394 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 30160443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 31761398 - 31761447
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||| |||||||||| | ||||| | |||||||||||||||    
T  31761398 accttacaagccgattttgtaaggatgagttaagccccaaatttcaacaa 31761447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 35734896 - 35734859
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc 38  Q
    |||||||||||||||||||||  |||||||||||||||    
T  35734896 accttacaagccggttttgtagtgttaagttaggtccc 35734859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Complemental strand, 44403966 - 44403929
Alignment:
Q  13 ggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| | |||||||||||||||||||||||    
T  44403966 ggttttgtaaggatgagttaggtcccaaatttcaacaa 44403929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 883917 - 883965
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| ||||| ||||    
T  883917 accttacaagccggttttgtaaggatgagttaggcccccaattttaaca 883965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3435523 - 3435475
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||| |||||||||||||| | ||||||| |||||||| |||||    
T  3435523 accttacaaaccggttttgtaaggatgagttaggccccaaattacaaca 3435475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 10429808 - 10429852
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||||||||||||||||||||| | ||||||  ||||||||||||    
T  10429808 cttacaagccggttttgtaaggatgagttagaccccaaatttcaa 10429852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 16007044 - 16007092
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  |||||| |||||||    
T  16007044 accttacaagccggttttgtaaggatgagttagaccccaaagttcaaca 16007092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29923366 - 29923413
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||| |||||| | ||||||| ||||||||||||||    
T  29923366 accttacaagccggttt-gtaaggatgagttaggccccaaatttcaaca 29923413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31761199 - 31761247
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||  |||||||||||| | ||||||| ||||||||||||||    
T  31761199 accttacaagttggttttgtaaggatgagttaggccccaaatttcaaca 31761247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 37253312 - 37253276
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcc 37  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  37253312 acctcacaagccggttttgtaaggttcagttaggtcc 37253276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.00000000001; HSPs: 19)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1663641 - 1663593
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  1663641 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 1663593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 6783105 - 6783153
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  6783105 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 6783153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23396676 - 23396724
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  23396676 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 23396724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41670900 - 41670948
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  41670900 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 41670948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 43288599 - 43288648
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||| |||||||||| ||||    
T  43288599 accttacaagccggttttgtaaggattagttaggccccaaatttcgacaa 43288648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1661228 - 1661180
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||  | ||||||| ||||||||||||||    
T  1661228 accttacaagccggttttgtaagaatgagttaggccccaaatttcaaca 1661180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28910099 - 28910147
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  28910099 accttacaagccggttttgtaaggatgagttagcccccaaatttcaaca 28910147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28910232 - 28910280
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  28910232 accttacaagccggttttgtaaggatgagttagcccccaaatttcaaca 28910280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 3 - 50
Target Start/End: Original strand, 23396883 - 23396930
Alignment:
Q  3 cttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||| | ||||||  |||||||||||||||    
T  23396883 cttacaagccggttttgtaaggatgagttagaccccaaatttcaacaa 23396930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 257304 - 257258
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    ||||||| |||||||||||||||| | ||||||| ||||||||||||    
T  257304 accttactagccggttttgtaaggatgagttaggccccaaatttcaa 257258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40703448 - 40703402
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaa 47  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||||||    
T  40703448 acctcacaagccggttttgtaaggatgagttaggccccaaatttcaa 40703402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 6960003 - 6959954
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| || ||||||||| ||||||||||| |||||||| ||||    
T  6960003 accttacaagctgggtttgtaaggataagttaggtcacaaatttctacaa 6959954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 8585158 - 8585207
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | ||||||  |||||||||||||||    
T  8585158 accttacaagctggttttgtaaggatgagttagaccccaaatttcaacaa 8585207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 6813320 - 6813272
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||| |||  |||||||| ||||||||||||||    
T  6813320 acctcacaagccggttttgtgaggacaagttaggccccaaatttcaaca 6813272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 14595918 - 14595882
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcc 37  Q
    |||||| ||||||||||||||||||| ||||||||||    
T  14595918 accttaaaagccggttttgtaaggttgagttaggtcc 14595882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23821713 - 23821665
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||  |||||||||||| | ||||||| ||||||||||||||    
T  23821713 accttacaagttggttttgtaaggatgagttaggccccaaatttcaaca 23821665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 31374832 - 31374880
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||| ||||||||||    
T  31374832 accttacaagccggttttgtaaggatgagttagaccccgaatttcaaca 31374880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 39079673 - 39079637
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcc 37  Q
    |||| ||||||||||||||||||||| ||||||||||    
T  39079673 acctaacaagccggttttgtaaggttgagttaggtcc 39079637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 5 - 49
Target Start/End: Complemental strand, 40121651 - 40121607
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| | ||||| | ||||||||||||||    
T  40121651 tacaagccggttttgtaaggatgagttacgccccaaatttcaaca 40121607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 37; Significance: 0.00000000001; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19481429 - 19481381
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  19481429 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 19481381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20735589 - 20735637
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  20735589 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 20735637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29273103 - 29273055
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  29273103 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29273055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29273262 - 29273214
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  29273262 accttacaagccggttttgtaaggatgagttaggccccaaatttcaaca 29273214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 31305778 - 31305828
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaag 51  Q
    |||||||||||||||||||||||| | |||||||  |||||||||||||||    
T  31305778 accttacaagccggttttgtaaggatgagttaggctccaaatttcaacaag 31305828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 48558358 - 48558308
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaag 51  Q
    |||||||||||||||||||||||| | ||||| | ||||||||||||||||    
T  48558358 accttacaagccggttttgtaaggatgagttaagccccaaatttcaacaag 48558308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15392171 - 15392220
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||| |||||||||| | ||||||| |||||||||||||||    
T  15392171 accttacaagccgattttgtaaggatgagttaggccccaaatttcaacaa 15392220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 33879815 - 33879766
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||||    
T  33879815 accttacaagctggttttgtaaggatgagttaggccccaaatttcaacaa 33879766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 33964440 - 33964489
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||||    
T  33964440 accttacaagctggttttgtaaggatgagttaggccccaaatttcaacaa 33964489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35926285 - 35926236
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||||||||| | ||||||| |||||||||||||||    
T  35926285 accttacaagctggttttgtaaggatgagttaggccccaaatttcaacaa 35926236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2104297 - 2104250
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||||||||||||||    
T  2104297 accttacaagccggttttgtaaggatgagttagg-cccaaatttcaaca 2104250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2997093 - 2997045
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||| | ||||||| ||||||||||||||    
T  2997093 acctcacaagccggttttgtaaggatgagttaggccccaaatttcaaca 2997045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4022162 - 4022114
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||||||||    
T  4022162 accttacaagccagttttgtaaggatgagttaggccccaaatttcaaca 4022114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 9380971 - 9381015
Alignment:
Q  5 tacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||    
T  9380971 tacaagccggttttgtaaggatgagttaggccccaaatttcaaca 9381015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 9381166 - 9381214
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||| ||||||||| | ||||||| ||||||||||||||    
T  9381166 accttacaagccggctttgtaaggatgagttaggccccaaatttcaaca 9381214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 15392095 - 15392139
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaac 48  Q
    ||||||||||||||||||||| | ||||||| |||||||||||||    
T  15392095 ttacaagccggttttgtaaggatgagttaggccccaaatttcaac 15392139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 17419854 - 17419902
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  ||||||||||||||    
T  17419854 accttacaagccggttttgtaaggatgagttagaccccaaatttcaaca 17419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 29272944 - 29272896
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| | ||||||||||||    
T  29272944 accttacaagccggttttgtaaggatgagttaggcctcaaatttcaaca 29272896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39649121 - 39649073
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  39649121 accttacaagccggttttgtaaggatgagttatgccccaaatttcaaca 39649073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 52846886 - 52846838
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||| | ||||||||||||||    
T  52846886 accttacaagccggttttgtaaggatgagttaagccccaaatttcaaca 52846838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 463120 - 463071
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtccc-aaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||| ||| |||||||||||    
T  463120 accttacaagccggttttgtaaggatgagttaggccccaaaatttcaaca 463071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 13959469 - 13959518
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||| |||||| ||||| | ||||||| |||||||||||||||    
T  13959469 accttacaagctggttttttaaggatgagttaggccccaaatttcaacaa 13959518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 15013592 - 15013641
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    ||||||||||||||||||||||   | ||||||| |||||||||||||||    
T  15013592 accttacaagccggttttgtaaaaatgagttaggccccaaatttcaacaa 15013641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 19609222 - 19609189
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttagg 34  Q
    |||||||||||||||||||||||||| |||||||    
T  19609222 accttacaagccggttttgtaaggttgagttagg 19609189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 26366869 - 26366821
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||| | |||||||||||||||    
T  26366869 accttacaagccggttttgtaaggatgagttacg-cccaaatttcaacaa 26366821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 35024497 - 35024448
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| |  |||||| |||||||||| ||||    
T  35024497 accttacaagccggttttgtaaggatgggttaggccccaaatttctacaa 35024448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 43361589 - 43361540
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | ||||||  ||| |||||||||||    
T  43361589 accttacaagccggttttgtaaggatgagttagacccccaatttcaacaa 43361540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 45264729 - 45264778
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||| | |||||   |||||||||||||||    
T  45264729 accttacaagccggttttgtaaggatgagttaatccccaaatttcaacaa 45264778  T

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Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 2697368 - 2697320
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||||||||||||||||   ||||||  ||||||||||||||    
T  2697368 accttacaagccggttttgtaaggacgagttagaccccaaatttcaaca 2697320  T

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Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 8520130 - 8520082
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||| | | ||||||  ||||||||||||||    
T  8520130 accttacaagccggttttgtaaagatgagttagaccccaaatttcaaca 8520082  T

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Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11149460 - 11149420
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaa 41  Q
    |||||||||||||||||||||||| | ||||||| ||||||    
T  11149460 accttacaagccggttttgtaaggatgagttaggccccaaa 11149420  T

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Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15391886 - 15391934
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | ||| ||| ||||||||||||||    
T  15391886 accttacaagccagttttgtaaggatgagtaaggccccaaatttcaaca 15391934  T

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Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 19937080 - 19937032
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | |||||||  || ||||||||||    
T  19937080 accttacaagccggttttgtaaggatgagttaggcaccgaatttcaaca 19937032  T

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Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20735822 - 20735870
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||| | | ||||||||||||    
T  20735822 accttacaagccggttttgtaaggatgagttaagcctcaaatttcaaca 20735870  T

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Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 21638303 - 21638255
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||  |||||||||||| | ||||||| ||||||||||||||    
T  21638303 accttacaagatggttttgtaaggatgagttaggccccaaatttcaaca 21638255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 6 - 46
Target Start/End: Complemental strand, 22892720 - 22892680
Alignment:
Q  6 acaagccggttttgtaaggttaagttaggtcccaaatttca 46  Q
    ||||||||||||||||||| | ||||||| |||||||||||    
T  22892720 acaagccggttttgtaaggatgagttaggccccaaatttca 22892680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 37600939 - 37600987
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||| ||||||||||||||||| | ||||| | ||||||||||||||    
T  37600939 accttataagccggttttgtaaggatgagttaagccccaaatttcaaca 37600987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 43423346 - 43423394
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||| ||||||||||| | ||||||| ||||||||| ||||    
T  43423346 accttacaagccagttttgtaaggatgagttaggccccaaattttaaca 43423394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 45403507 - 45403555
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| | ||||||||||||    
T  45403507 accttacaagctggttttgtaaggatgagttaggcctcaaatttcaaca 45403555  T

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Target: scaffold0060 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: scaffold0060
Description:

Target: scaffold0060; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13669 - 13620
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||||||| ||||||  ||| |||||||||||    
T  13669 accttacaagccggttttgtaaggttgagttagacccccaatttcaacaa 13620  T

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Target: scaffold0060; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 20607 - 20655
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    ||||||||||| |||||||||||| | ||||||| |||||||| |||||    
T  20607 accttacaagctggttttgtaaggatgagttaggccccaaattacaaca 20655  T

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Target: scaffold0989 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0989
Description:

Target: scaffold0989; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 4 - 50
Target Start/End: Complemental strand, 2981 - 2935
Alignment:
Q  4 ttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||| |||||||||||| | ||||||| |||||||||||||||    
T  2981 ttacaagctggttttgtaaggatgagttaggccccaaatttcaacaa 2935  T

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Target: scaffold0459 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 13377 - 13414
Alignment:
Q  13 ggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| | |||||||||||||||||||||||    
T  13377 ggttttgtaaggatgagttaggtcccaaatttcaacaa 13414  T

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Target: scaffold0366 (Bit Score: 30; Significance: 0.0000001; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 11018 - 11055
Alignment:
Q  13 ggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| | |||||||||||||||||||||||    
T  11018 ggttttgtaaggatgagttaggtcccaaatttcaacaa 11055  T

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Target: scaffold0366; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 13 - 50
Target Start/End: Original strand, 14684 - 14721
Alignment:
Q  13 ggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||| | |||||||||||||||||||||||    
T  14684 ggttttgtaaggatgagttaggtcccaaatttcaacaa 14721  T

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Target: scaffold0029 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 76919 - 76968
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaacaa 50  Q
    |||||||||||||||||||||| | | ||||||| |||||||| ||||||    
T  76919 accttacaagccggttttgtaaagatgagttaggccccaaattacaacaa 76968  T

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Target: scaffold0729 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0729
Description:

Target: scaffold0729; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2543 - 2591
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||| ||||||||||||||||||||| ||||||  | ||||||||||||    
T  2543 acctcacaagccggttttgtaaggttgagttagacctcaaatttcaaca 2591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0434 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0434
Description:

Target: scaffold0434; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 13373 - 13421
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||| ||| | ||||||| ||| ||||||||||    
T  13373 accttacaagccggttttgtgaggatgagttaggccccgaatttcaaca 13421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 4276 - 4228
Alignment:
Q  1 accttacaagccggttttgtaaggttaagttaggtcccaaatttcaaca 49  Q
    |||||||||||||||||||||||| | ||||||  |||||||| |||||    
T  4276 accttacaagccggttttgtaaggatgagttagaccccaaattacaaca 4228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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