View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8490_low_5 (Length: 523)

Name: NF8490_low_5
Description: NF8490
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8490_low_5
NF8490_low_5
[»] chr1 (68 HSPs)
chr1 (196-511)||(48022182-48022498)
chr1 (204-339)||(2864112-2864246)
chr1 (204-339)||(39150551-39150686)
chr1 (228-343)||(47187819-47187934)
chr1 (204-343)||(39156230-39156373)
chr1 (46-139)||(3491498-3491591)
chr1 (48-139)||(8550380-8550471)
chr1 (241-343)||(44329602-44329704)
chr1 (204-343)||(32562352-32562489)
chr1 (213-335)||(8365481-8365603)
chr1 (230-323)||(38491216-38491309)
chr1 (55-139)||(298195-298279)
chr1 (230-343)||(43397013-43397128)
chr1 (204-342)||(40460722-40460860)
chr1 (231-339)||(38748723-38748831)
chr1 (56-135)||(21276636-21276715)
chr1 (204-306)||(34232742-34232844)
chr1 (55-138)||(2614797-2614880)
chr1 (38-109)||(48022739-48022810)
chr1 (204-306)||(39914640-39914742)
chr1 (231-323)||(8794412-8794504)
chr1 (228-343)||(2994970-2995084)
chr1 (44-135)||(42596900-42596991)
chr1 (235-322)||(44829272-44829359)
chr1 (205-301)||(7212745-7212839)
chr1 (55-135)||(5198793-5198873)
chr1 (112-172)||(48022527-48022587)
chr1 (249-336)||(18432958-18433045)
chr1 (55-134)||(47588483-47588562)
chr1 (49-135)||(38788936-38789021)
chr1 (206-339)||(14746202-14746334)
chr1 (206-339)||(34409705-34409837)
chr1 (200-297)||(43024957-43025054)
chr1 (44-145)||(52141561-52141661)
chr1 (31-138)||(13352294-13352402)
chr1 (204-304)||(26811269-26811368)
chr1 (228-336)||(45640540-45640647)
chr1 (227-306)||(42791177-42791256)
chr1 (66-129)||(47370427-47370490)
chr1 (210-343)||(3982240-3982372)
chr1 (196-317)||(33744159-33744280)
chr1 (47-135)||(7648759-7648847)
chr1 (228-312)||(30822805-30822889)
chr1 (276-343)||(36563745-36563810)
chr1 (255-339)||(44329484-44329568)
chr1 (264-327)||(604445-604508)
chr1 (256-323)||(5423764-5423831)
chr1 (276-343)||(6883126-6883193)
chr1 (213-343)||(8372973-8373094)
chr1 (230-335)||(1048677-1048780)
chr1 (55-108)||(4051693-4051746)
chr1 (53-114)||(13132197-13132258)
chr1 (47-108)||(51672741-51672802)
chr1 (249-325)||(17552847-17552923)
chr1 (52-92)||(25409659-25409699)
chr1 (47-139)||(27211298-27211390)
chr1 (44-92)||(48722762-48722810)
chr1 (83-135)||(50746016-50746068)
chr1 (259-369)||(31889186-31889300)
chr1 (205-339)||(4851247-4851380)
chr1 (44-93)||(12521329-12521378)
chr1 (230-299)||(39973887-39973956)
chr1 (200-297)||(42573813-42573910)
chr1 (46-90)||(9641845-9641889)
chr1 (98-142)||(14149439-14149483)
chr1 (100-136)||(32544771-32544807)
chr1 (204-272)||(34861282-34861349)
chr1 (101-133)||(52141474-52141506)
[»] scaffold0036 (1 HSPs)
scaffold0036 (204-339)||(62527-62662)
[»] chr5 (43 HSPs)
chr5 (204-339)||(18229604-18229738)
chr5 (203-339)||(30501142-30501278)
chr5 (203-339)||(30541485-30541621)
chr5 (204-339)||(7719173-7719308)
chr5 (233-339)||(9276582-9276688)
chr5 (230-339)||(16667294-16667403)
chr5 (230-343)||(30104799-30104912)
chr5 (208-339)||(13479992-13480123)
chr5 (227-343)||(34899134-34899250)
chr5 (227-327)||(40530449-40530549)
chr5 (228-343)||(3140807-3140922)
chr5 (249-336)||(8221136-8221223)
chr5 (207-378)||(39558727-39558900)
chr5 (230-339)||(112488-112597)
chr5 (47-138)||(3344951-3345042)
chr5 (235-339)||(17692262-17692366)
chr5 (256-343)||(8208200-8208287)
chr5 (270-336)||(23117232-23117298)
chr5 (204-306)||(41583512-41583614)
chr5 (230-343)||(15720062-15720175)
chr5 (228-325)||(41047979-41048076)
chr5 (55-139)||(5402789-5402873)
chr5 (47-138)||(32135804-32135895)
chr5 (249-323)||(18963826-18963900)
chr5 (46-138)||(21369110-21369203)
chr5 (231-323)||(2918615-2918707)
chr5 (47-117)||(2903368-2903438)
chr5 (86-136)||(13789882-13789932)
chr5 (55-141)||(25836906-25836992)
chr5 (54-139)||(17566686-17566771)
chr5 (227-327)||(5815085-5815185)
chr5 (52-136)||(16285929-16286012)
chr5 (100-139)||(15270352-15270391)
chr5 (291-339)||(7968446-7968494)
chr5 (44-108)||(10044234-10044298)
chr5 (264-336)||(14043410-14043482)
chr5 (226-290)||(25693837-25693900)
chr5 (47-134)||(25037330-25037417)
chr5 (205-299)||(779056-779149)
chr5 (261-306)||(7606936-7606981)
chr5 (204-289)||(34032142-34032227)
chr5 (48-92)||(5599-5643)
chr5 (204-240)||(591325-591361)
[»] chr4 (73 HSPs)
chr4 (204-339)||(8297840-8297975)
chr4 (204-343)||(7444383-7444523)
chr4 (227-339)||(7852546-7852658)
chr4 (204-339)||(35777701-35777836)
chr4 (44-142)||(10109212-10109310)
chr4 (196-336)||(41462010-41462150)
chr4 (231-339)||(47995739-47995847)
chr4 (44-139)||(22409413-22409508)
chr4 (228-343)||(51834907-51835022)
chr4 (230-336)||(27953046-27953151)
chr4 (228-339)||(24229648-24229759)
chr4 (228-343)||(25115262-25115376)
chr4 (204-339)||(45900151-45900286)
chr4 (201-339)||(24175401-24175538)
chr4 (209-338)||(37440800-37440929)
chr4 (230-326)||(20394633-20394728)
chr4 (235-343)||(50426989-50427097)
chr4 (56-137)||(26533186-26533267)
chr4 (230-343)||(31174649-31174762)
chr4 (204-339)||(49400582-49400716)
chr4 (24-138)||(26889921-26890035)
chr4 (26-136)||(38793721-38793831)
chr4 (230-327)||(49084414-49084512)
chr4 (237-339)||(50341869-50341971)
chr4 (266-339)||(8261139-8261212)
chr4 (266-339)||(8274556-8274629)
chr4 (238-339)||(31429280-31429381)
chr4 (265-330)||(36702814-36702879)
chr4 (52-136)||(4960446-4960534)
chr4 (205-343)||(31690353-31690490)
chr4 (230-339)||(53014208-53014317)
chr4 (44-139)||(30538010-30538105)
chr4 (44-139)||(32318512-32318606)
chr4 (207-306)||(51736327-51736425)
chr4 (52-138)||(14136653-14136739)
chr4 (249-343)||(34391705-34391799)
chr4 (205-327)||(39195741-39195862)
chr4 (47-136)||(53039468-53039557)
chr4 (55-131)||(20574954-20575030)
chr4 (205-339)||(37060522-37060653)
chr4 (54-108)||(24010282-24010336)
chr4 (249-327)||(42222969-42223047)
chr4 (47-136)||(41460624-41460712)
chr4 (47-139)||(17268862-17268954)
chr4 (47-135)||(32055091-32055179)
chr4 (46-138)||(41069084-41069176)
chr4 (228-339)||(13585263-13585370)
chr4 (228-299)||(12618736-12618807)
chr4 (33-108)||(18995241-18995315)
chr4 (211-336)||(48337532-48337658)
chr4 (249-294)||(23605974-23606019)
chr4 (249-326)||(37138177-37138254)
chr4 (206-322)||(41956449-41956565)
chr4 (44-138)||(42899567-42899654)
chr4 (101-133)||(53039377-53039409)
chr4 (234-273)||(8260201-8260240)
chr4 (234-273)||(8273619-8273658)
chr4 (204-286)||(13800751-13800831)
chr4 (28-135)||(20789218-20789325)
chr4 (228-323)||(37383773-37383867)
chr4 (256-323)||(43969203-43969269)
chr4 (102-141)||(46393119-46393158)
chr4 (208-271)||(53261531-53261594)
chr4 (55-137)||(10305244-10305326)
chr4 (101-139)||(25435753-25435791)
chr4 (268-338)||(41370172-41370241)
chr4 (55-140)||(30255284-30255364)
chr4 (54-139)||(51675870-51675955)
chr4 (47-140)||(52279059-52279151)
chr4 (263-327)||(14031353-14031417)
chr4 (55-135)||(14958418-14958497)
chr4 (204-316)||(24981761-24981873)
chr4 (55-135)||(45850194-45850274)
[»] chr8 (61 HSPs)
chr8 (204-339)||(27801228-27801363)
chr8 (204-326)||(28207593-28207715)
chr8 (44-136)||(11257854-11257946)
chr8 (204-339)||(42636368-42636503)
chr8 (247-336)||(35901943-35902032)
chr8 (236-343)||(1135162-1135269)
chr8 (228-339)||(4384138-4384248)
chr8 (46-137)||(37456100-37456191)
chr8 (236-339)||(3146037-3146144)
chr8 (230-339)||(2258093-2258202)
chr8 (204-301)||(2888760-2888856)
chr8 (44-129)||(7107515-7107600)
chr8 (228-349)||(12829863-12829984)
chr8 (235-339)||(1369861-1369965)
chr8 (47-139)||(17867438-17867530)
chr8 (55-139)||(30069797-30069881)
chr8 (204-302)||(16723234-16723332)
chr8 (205-327)||(167858-167978)
chr8 (228-343)||(24695740-24695854)
chr8 (255-329)||(3520820-3520894)
chr8 (229-339)||(12684496-12684606)
chr8 (231-375)||(33013041-33013187)
chr8 (230-343)||(33949548-33949661)
chr8 (46-136)||(41128125-41128215)
chr8 (44-109)||(1042790-1042855)
chr8 (230-336)||(37813410-37813514)
chr8 (226-338)||(12954719-12954831)
chr8 (56-115)||(8072535-8072594)
chr8 (208-323)||(39691132-39691247)
chr8 (202-369)||(9735274-9735441)
chr8 (208-339)||(884389-884520)
chr8 (247-318)||(5588972-5589043)
chr8 (44-135)||(5896082-5896173)
chr8 (81-148)||(36068014-36068081)
chr8 (231-338)||(36355960-36356062)
chr8 (204-306)||(9024457-9024559)
chr8 (208-306)||(13028103-13028200)
chr8 (44-138)||(31410866-31410959)
chr8 (28-141)||(2539829-2539941)
chr8 (205-322)||(25279899-25280015)
chr8 (44-137)||(38869754-38869847)
chr8 (44-108)||(16037307-16037371)
chr8 (264-336)||(33067531-33067603)
chr8 (204-252)||(37426388-37426436)
chr8 (292-339)||(26750607-26750654)
chr8 (237-295)||(2250356-2250414)
chr8 (44-118)||(6393557-6393631)
chr8 (67-139)||(8770978-8771050)
chr8 (54-130)||(31451269-31451345)
chr8 (244-339)||(37427197-37427295)
chr8 (205-317)||(37564356-37564468)
chr8 (208-343)||(45197347-45197485)
chr8 (204-243)||(40298850-40298889)
chr8 (251-313)||(2072381-2072443)
chr8 (204-306)||(20279590-20279692)
chr8 (204-306)||(21066217-21066319)
chr8 (55-105)||(26014940-26014990)
chr8 (44-137)||(40651605-40651699)
chr8 (206-271)||(1876552-1876617)
chr8 (237-290)||(12544982-12545035)
chr8 (230-306)||(27734375-27734451)
[»] chr7 (64 HSPs)
chr7 (204-339)||(44537310-44537445)
chr7 (204-339)||(28663141-28663274)
chr7 (204-339)||(28770446-28770581)
chr7 (230-343)||(35496571-35496684)
chr7 (204-339)||(27123243-27123378)
chr7 (204-339)||(43234759-43234894)
chr7 (227-341)||(37158356-37158470)
chr7 (46-139)||(38073658-38073751)
chr7 (233-378)||(21727366-21727514)
chr7 (230-339)||(39320984-39321093)
chr7 (54-135)||(6647514-6647595)
chr7 (54-135)||(38652725-38652806)
chr7 (34-139)||(41888867-41888972)
chr7 (249-339)||(32051336-32051424)
chr7 (54-136)||(39854184-39854265)
chr7 (46-138)||(40211818-40211910)
chr7 (200-343)||(40753945-40754087)
chr7 (249-343)||(26239539-26239633)
chr7 (252-369)||(42936024-42936140)
chr7 (55-136)||(20884554-20884635)
chr7 (204-336)||(27870397-27870522)
chr7 (249-343)||(35923505-35923595)
chr7 (230-339)||(43224089-43224198)
chr7 (229-306)||(44592860-44592937)
chr7 (205-317)||(10031945-10032057)
chr7 (44-139)||(37391032-37391127)
chr7 (249-323)||(3692891-3692965)
chr7 (249-339)||(7653590-7653680)
chr7 (249-343)||(25886184-25886278)
chr7 (230-339)||(35731282-35731391)
chr7 (229-336)||(32699758-32699863)
chr7 (288-339)||(48488180-48488231)
chr7 (228-339)||(9718996-9719103)
chr7 (46-135)||(46718519-46718608)
chr7 (81-137)||(11666699-11666755)
chr7 (44-108)||(21148417-21148481)
chr7 (47-139)||(45278695-45278787)
chr7 (66-129)||(17874712-17874775)
chr7 (268-323)||(33123800-33123855)
chr7 (208-314)||(2347390-2347496)
chr7 (249-343)||(29711491-29711585)
chr7 (227-313)||(33887880-33887966)
chr7 (38-108)||(33955917-33955987)
chr7 (229-290)||(3719199-3719260)
chr7 (57-106)||(6727156-6727205)
chr7 (52-89)||(11667042-11667079)
chr7 (54-139)||(14761837-14761922)
chr7 (259-343)||(2959573-2959656)
chr7 (80-136)||(8073654-8073710)
chr7 (228-299)||(1360529-1360600)
chr7 (207-322)||(46726109-46726223)
chr7 (204-270)||(5907794-5907859)
chr7 (233-299)||(22618739-22618805)
chr7 (204-322)||(35599821-35599939)
chr7 (259-329)||(47778567-47778636)
chr7 (259-336)||(34117876-34117953)
chr7 (259-339)||(10200593-10200672)
chr7 (204-240)||(15034899-15034935)
chr7 (249-317)||(18801054-18801122)
chr7 (55-139)||(21388108-21388192)
chr7 (47-135)||(31418045-31418133)
chr7 (99-139)||(38318948-38318988)
chr7 (101-133)||(39854084-39854116)
chr7 (47-91)||(44600241-44600285)
[»] chr2 (51 HSPs)
chr2 (204-339)||(4762318-4762453)
chr2 (230-339)||(1334886-1334995)
chr2 (235-339)||(19890191-19890295)
chr2 (204-339)||(20064880-20065014)
chr2 (44-140)||(32227430-32227526)
chr2 (204-339)||(34904790-34904925)
chr2 (233-339)||(31452349-31452454)
chr2 (230-343)||(9448952-9449064)
chr2 (208-306)||(14295602-14295699)
chr2 (201-342)||(15505510-15505651)
chr2 (46-142)||(32656237-32656333)
chr2 (44-135)||(12497271-12497362)
chr2 (204-333)||(38533877-38534004)
chr2 (231-339)||(31017310-31017418)
chr2 (44-135)||(33830304-33830395)
chr2 (228-343)||(37993071-37993186)
chr2 (205-327)||(11944888-11945009)
chr2 (253-339)||(29239251-29239336)
chr2 (47-138)||(6590638-6590729)
chr2 (44-139)||(30326116-30326211)
chr2 (47-138)||(45075650-45075741)
chr2 (72-138)||(43305459-43305525)
chr2 (249-343)||(9173704-9173799)
chr2 (228-323)||(1298981-1299078)
chr2 (233-339)||(5524459-5524565)
chr2 (44-134)||(35310195-35310285)
chr2 (204-333)||(38533354-38533481)
chr2 (205-337)||(40789678-40789810)
chr2 (227-339)||(41933123-41933235)
chr2 (228-335)||(7673187-7673294)
chr2 (44-136)||(9374027-9374119)
chr2 (55-139)||(35327847-35327930)
chr2 (44-115)||(10500328-10500399)
chr2 (204-299)||(24765304-24765399)
chr2 (55-137)||(14776270-14776352)
chr2 (253-343)||(33067718-33067808)
chr2 (204-317)||(2888877-2888990)
chr2 (204-317)||(25622503-25622615)
chr2 (205-281)||(21431049-21431124)
chr2 (55-139)||(40534216-40534300)
chr2 (100-135)||(25083852-25083887)
chr2 (253-335)||(9049157-9049238)
chr2 (48-90)||(12944217-12944259)
chr2 (284-338)||(33962947-33963000)
chr2 (267-308)||(4616870-4616911)
chr2 (47-132)||(27414138-27414223)
chr2 (101-134)||(30354058-30354091)
chr2 (44-93)||(41766326-41766375)
chr2 (205-277)||(431698-431770)
chr2 (88-140)||(11941488-11941540)
chr2 (59-139)||(25904825-25904905)
[»] chr3 (52 HSPs)
chr3 (44-140)||(972406-972502)
chr3 (199-333)||(29083908-29084042)
chr3 (44-137)||(36923591-36923684)
chr3 (230-334)||(42846012-42846117)
chr3 (55-139)||(28451812-28451896)
chr3 (44-138)||(37238850-37238944)
chr3 (49-135)||(50699805-50699891)
chr3 (45-141)||(43310336-43310432)
chr3 (44-135)||(21490370-21490461)
chr3 (44-119)||(28945837-28945912)
chr3 (55-137)||(13863686-13863767)
chr3 (230-328)||(49362367-49362465)
chr3 (259-366)||(41309825-41309936)
chr3 (228-343)||(16662968-16663084)
chr3 (265-327)||(24791526-24791588)
chr3 (205-339)||(48180173-48180307)
chr3 (228-329)||(52638171-52638271)
chr3 (235-339)||(51351277-51351381)
chr3 (46-137)||(12568694-12568785)
chr3 (46-137)||(13545158-13545249)
chr3 (47-138)||(21290217-21290308)
chr3 (229-336)||(47638889-47638996)
chr3 (55-139)||(7681637-7681721)
chr3 (249-333)||(12086771-12086855)
chr3 (44-132)||(50360645-50360733)
chr3 (255-318)||(26143090-26143153)
chr3 (230-343)||(26900021-26900136)
chr3 (230-343)||(39551854-39551966)
chr3 (259-327)||(42939856-42939924)
chr3 (247-318)||(22730509-22730580)
chr3 (249-304)||(11132602-11132657)
chr3 (248-339)||(35177818-35177909)
chr3 (204-343)||(48811367-48811505)
chr3 (44-115)||(51981723-51981794)
chr3 (57-135)||(12736187-12736264)
chr3 (257-339)||(40673456-40673538)
chr3 (55-135)||(50524335-50524413)
chr3 (55-139)||(13433753-13433837)
chr3 (99-135)||(28212062-28212098)
chr3 (44-104)||(43343680-43343739)
chr3 (228-287)||(52249319-52249378)
chr3 (48-118)||(28963452-28963522)
chr3 (268-338)||(32606386-32606454)
chr3 (230-332)||(45529129-45529230)
chr3 (249-299)||(46093593-46093643)
chr3 (99-132)||(12789853-12789886)
chr3 (57-142)||(38773503-38773588)
chr3 (110-142)||(4127508-4127540)
chr3 (101-137)||(30578750-30578786)
chr3 (99-139)||(37662918-37662958)
chr3 (55-135)||(46515777-46515857)
chr3 (99-139)||(50170594-50170634)
[»] chr6 (38 HSPs)
chr6 (249-339)||(17215685-17215775)
chr6 (204-339)||(3766249-3766381)
chr6 (230-343)||(28874394-28874507)
chr6 (259-339)||(31855078-31855158)
chr6 (255-339)||(32823697-32823781)
chr6 (228-323)||(26669297-26669392)
chr6 (230-336)||(1840978-1841084)
chr6 (46-126)||(32785851-32785931)
chr6 (228-343)||(2692429-2692543)
chr6 (230-333)||(30739594-30739697)
chr6 (249-338)||(24103781-24103870)
chr6 (228-339)||(19293455-19293566)
chr6 (57-135)||(17506419-17506497)
chr6 (238-339)||(7421675-7421776)
chr6 (228-339)||(27778747-27778857)
chr6 (206-326)||(34231970-34232090)
chr6 (204-339)||(5446664-5446799)
chr6 (58-125)||(34396210-34396277)
chr6 (229-339)||(1479095-1479204)
chr6 (206-369)||(9762774-9762938)
chr6 (249-338)||(23399124-23399213)
chr6 (44-137)||(31767781-31767874)
chr6 (264-339)||(30801770-30801845)
chr6 (200-294)||(11720925-11721019)
chr6 (47-140)||(154182-154275)
chr6 (253-306)||(34235413-34235466)
chr6 (249-343)||(2864892-2864985)
chr6 (204-260)||(31854763-31854819)
chr6 (233-323)||(2884087-2884175)
chr6 (46-133)||(3213728-3213815)
chr6 (44-117)||(33972674-33972748)
chr6 (204-317)||(35229261-35229374)
chr6 (49-92)||(4011240-4011283)
chr6 (204-327)||(15588624-15588746)
chr6 (46-108)||(8853640-8853702)
chr6 (249-322)||(1371183-1371256)
chr6 (249-322)||(1378931-1379004)
chr6 (271-343)||(3443902-3443973)
[»] scaffold0419 (1 HSPs)
scaffold0419 (230-343)||(1060-1173)
[»] scaffold0154 (1 HSPs)
scaffold0154 (46-139)||(36418-36511)
[»] scaffold1157 (1 HSPs)
scaffold1157 (47-138)||(1952-2043)
[»] scaffold0119 (1 HSPs)
scaffold0119 (228-323)||(1401-1496)
[»] scaffold0003 (1 HSPs)
scaffold0003 (230-333)||(103657-103760)
[»] scaffold0007 (1 HSPs)
scaffold0007 (44-139)||(260378-260473)
[»] scaffold0102 (1 HSPs)
scaffold0102 (55-140)||(21228-21313)
[»] scaffold0268 (1 HSPs)
scaffold0268 (259-339)||(20251-20330)
[»] scaffold0004 (1 HSPs)
scaffold0004 (239-323)||(335866-335950)
[»] scaffold0061 (1 HSPs)
scaffold0061 (46-132)||(3529-3615)
[»] scaffold0017 (1 HSPs)
scaffold0017 (46-132)||(130506-130592)
[»] scaffold0524 (1 HSPs)
scaffold0524 (44-105)||(1491-1552)
[»] scaffold0464 (1 HSPs)
scaffold0464 (47-139)||(6673-6765)
[»] scaffold0129 (1 HSPs)
scaffold0129 (44-108)||(37553-37617)
[»] scaffold1444 (1 HSPs)
scaffold1444 (249-323)||(950-1024)
[»] scaffold0204 (1 HSPs)
scaffold0204 (211-336)||(25054-25180)
[»] scaffold0008 (1 HSPs)
scaffold0008 (101-137)||(240561-240597)


Alignment Details
Target: chr1 (Bit Score: 241; Significance: 1e-133; HSPs: 68)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 241; E-Value: 1e-133
Query Start/End: Original strand, 196 - 511
Target Start/End: Complemental strand, 48022498 - 48022182
Alignment:
Q  196 attgttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg 295  Q
    ||||||| ||||||||||||||||||||||  |  |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  48022498 attgttagggtcttgttaacgagtgcccctgtggtactctttaagcatcccatatttagtaattattgttttaaaaagttaactattgcaattttcaatg 48022399  T
Q  296 cattcaatacataatttttcattaaaaacttattatttaaagtgtttagaagtgccc-gaaacactcgttaacatctctcttatttttattttgttacaa 394  Q
    ||||||||||||| ||||| |||||||||||| |||||||| || |||||||||||| |||| ||||||| |||| ||||||||||||||||||||||||    
T  48022398 cattcaatacatatttttttattaaaaacttactatttaaaatgcttagaagtgccccgaaatactcgttgacatttctcttatttttattttgttacaa 48022299  T
Q  395 atgcgtggatgtcccctttacatccagaggggaaaagtgaagttaacgcacacactcttctggttaaacgtttccttcatttatatctcttttgttttcc 494  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  48022298 atgcctggatgtcccctttacatccaaaggggaaaagtgaagttaatgcacacactcttctggttaaacgtttccttcatttatatctcttttgttttcc 48022199  T
Q  495 ctatcaggaggttcatc 511  Q
    |||||||||||||||||    
T  48022198 ctatcaggaggttcatc 48022182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 2864112 - 2864246
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||| |||   |||||||||||| |||||||||||||| ||||||| ||| ||||||| |||||||||||||| |||||||||||||    
T  2864112 ggtcttgttaacgagtgtccccgggacactctttaaacatcccatatttaggaattattcttt-aaaaagtcaactattacaatttccaatgcattcaat 2864210  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || ||||||||||||||||| |||||||||||    
T  2864211 acacaacttttcattaaaaacttactatttaaagtg 2864246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 39150551 - 39150686
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   | |||||||||||||||| | |||||||||||||| || |||||||| |||||||||||||| |||||||||||||    
T  39150551 ggtcttgttaacgagtgcccccggggcactctttaagcatcctaaatttagtaattattcttgtaaaaagtcaactattacaatttacaatgcattcaat 39150650  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| |||||||||||| |||| || ||||||||    
T  39150651 acataaattttcattaaaatcttactagttaaagtg 39150686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 47187934 - 47187819
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||||||| ||||||||||||||  |||||||| | |||||||| ||||| |||||||||||||||||||||||||||||||||||||    
T  47187934 gacactctttaagcatcccaaatttagtaattattcatttaaaaaatcaactattataatttccaatgcattcaatacataatttttcattaaaaactta 47187835  T
Q  328 ttatttaaagtgttta 343  Q
      |||| |||||||||    
T  47187834 ccattttaagtgttta 47187819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 204 - 343
Target Start/End: Original strand, 39156230 - 39156373
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||| ||||||||||||||||||  | |||||||||||||| ||||||||||| ||||| |||||||| |||||||||||||    
T  39156230 ggtcttgttaacgagtgcccctgagacactctttaagcatcaaaaatttagtaattattcttttaaaaagtcaactactacaatttccaatgcattcaat 39156329  T
Q  304 acataatttttc----attaaaaacttattatttaaagtgttta 343  Q
    ||| |||||||     |||||||| |||  ||||||||||||||    
T  39156330 acacaattttttttttattaaaaatttaccatttaaagtgttta 39156373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 3491498 - 3491591
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||| |||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  3491498 attttgagcaataaattatcacaatttccaatacataatttctattagtggaattcttaacatttgccctaagggcacaagttaacatttccct 3491591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 48 - 139
Target Start/End: Original strand, 8550380 - 8550471
Alignment:
Q  48 tttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| | || || |||||||||||||||||||    
T  8550380 tttaagcaataaattaacacaatttccaatacataatttctattagtggaattcttaacatatgtcatacgggcacaagttaacatttccct 8550471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 241 - 343
Target Start/End: Original strand, 44329602 - 44329704
Alignment:
Q  241 catcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgt 340  Q
    |||| |||||||| |||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||| | |||||||||  ||||||||||||    
T  44329602 catctcatatttaataattattcttttaaaaagtcaactattataattttcaatgcattcaatacataattttttactaaaaactttctatttaaagtgt 44329701  T
Q  341 tta 343  Q
    |||    
T  44329702 tta 44329704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 204 - 343
Target Start/End: Complemental strand, 32562489 - 32562352
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| ||||| || | ||||||||||||| |||  | |||||||||||||| ||||||||| | |||||||||||||||||||||| | |||    
T  32562489 ggtcttgttaacaagtgcaccga-gacactctttaagaatctaaaatttagtaattattattttaaaaattcaactattacaattttcaatgcagtgaat 32562391  T
Q  304 acataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||| ||||||| | |||||||||| |||||||||||||||    
T  32562390 acacaatttttta-taaaaacttactatttaaagtgttta 32562352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 213 - 335
Target Start/End: Original strand, 8365481 - 8365603
Alignment:
Q  213 aacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataattt 312  Q
    |||||||| |||  || |||||||||| ||||| | ||||| |||||||| ||||||||| | |||||||||||| ||||||||||||||||||| ||||    
T  8365481 aacgagtgtcccagaggcactctttaaacatcctaaatttaataattattcttttaaaaaatcaactattacaatcttcaatgcattcaatacatcattt 8365580  T
Q  313 ttcattaaaaacttattatttaa 335  Q
    |||| |||||||||| |||||||    
T  8365581 ttcaataaaaacttactatttaa 8365603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 323
Target Start/End: Original strand, 38491216 - 38491309
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||| || |||||| |||||||||||||| | ||||||||| |||||||||||||| |||||||||||||||| ||||||||||||||||    
T  38491216 cactctttcagaatcccaaatttagtaattattatgttaaaaagtcaactattacaatttacaatgcattcaatacacaatttttcattaaaaa 38491309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 298279 - 298195
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  298279 aataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccctaagggcacaagttaacatttccct 298195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 43397128 - 43397013
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattg--ttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||| | |||||||||||||    ||||||||||| |||||||| ||||| ||||||||| |||||| || |||||||||||||||||    
T  43397128 cactctttaagcatcctaaatttagtaattatatatttttaaaaagtcaactattataatttccaatgcatttaatacacaacttttcattaaaaactta 43397029  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  43397028 ctatttaaagtgttta 43397013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 204 - 342
Target Start/End: Complemental strand, 40460860 - 40460722
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||| |||||||||||| |  ||| ||||||||||||||| | ||||| ||||||||  |||||||| | || ||||||| ||| ||||  |||||||    
T  40460860 ggtctttttaacgagtgcctccgagatactctttaagcatccaaaatttaataattattcatttaaaaaatcaattattacagtttccaatttattcaat 40460761  T
Q  304 acataatttttcattaaaaacttattatttaaagtgttt 342  Q
    | | |||||||||||||||||||| ||||||||||||||    
T  40460760 atacaatttttcattaaaaacttactatttaaagtgttt 40460722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 38748831 - 38748723
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    ||||||||||||| ||| |||||| ||||||| ||||||||||| |||||||| ||||||||||||| |||||||| || ||||||| || |||||| ||    
T  38748831 actctttaagcataccaaatttagaaattattcttttaaaaagtcaactattataattttcaatgcactcaatacacaacttttcataaataacttacta 38748732  T
Q  331 tttaaagtg 339  Q
     ||||||||    
T  38748731 attaaagtg 38748723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 56 - 135
Target Start/End: Original strand, 21276636 - 21276715
Alignment:
Q  56 ataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||| ||| ||||||||||||||||||||| ||||    
T  21276636 ataaattaacacaattttcaatacataatttctattagtggaattcttatcatgtgccctaaggacacaagttaatattt 21276715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 34232844 - 34232742
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| |    ||||||||||||||||||   |||||| ||||||| ||||||||||| ||||||||||||||||||||| ||||||    
T  34232844 ggtcttgttaacgagtgctcacgggacactctttaagcatccttaatttagcaattattcttttaaaaagtcaactattacaattttcaatgctttcaat 34232745  T
Q  304 aca 306  Q
    |||    
T  34232744 aca 34232742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 55 - 138
Target Start/End: Complemental strand, 2614880 - 2614797
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||| | ||||||| || ||||||||| |||||  ||||| ||||||||||||||||||||||||||||||||||||||    
T  2614880 aataaattaacgcaatttcaaaaacataatttttattaatggaatccttaacatatgccctaaggacacaagttaacatttccc 2614797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 38 - 109
Target Start/End: Complemental strand, 48022810 - 48022739
Alignment:
Q  38 tactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacata 109  Q
    ||||| ||||||| |||||||| ||| |||||||||||||||||||||||||||| ||||||||||||||||    
T  48022810 tactaaacatttttagcaataatttaacacaatttccaatacataatttctattacaggaattcttaacata 48022739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 39914742 - 39914640
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||  |   |||||||||||||||| ||| |||||  |||| || ||||||||||| |||||||||||||||||||||| |||||    
T  39914742 ggtcttgttaacgagtgcttccgggacactctttaagcataccaaatttaacaattgttcttttaaaaagtcaactattacaattttcaatgcactcaat 39914643  T
Q  304 aca 306  Q
    |||    
T  39914642 aca 39914640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 231 - 323
Target Start/End: Original strand, 8794412 - 8794504
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    ||||||||||||||| | |||||||||||||| ||||||||||| |||||||| ||||||||||||| || ||||| || |||| || |||||    
T  8794412 actctttaagcatcctaaatttagtaattattcttttaaaaagtcaactattataattttcaatgcactccatacacaactttttataaaaaa 8794504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 2995084 - 2994970
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||| |||| | |||||||||||||| ||||||||||| |||||||| ||||||||||    | |||||| || |||| | ||||||||||    
T  2995084 gacactctttaagaatccaaaatttagtaattattattttaaaaagtaaactattataattttcaattttgtaaatacacaacttttta-taaaaactta 2994986  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  2994985 ctatttaaagtgttta 2994970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 42596991 - 42596900
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||||||||||||||| |||||| | ||||| || ||||||||||| |||||||||||||| | || | ||| |||||||||||||||    
T  42596991 acattttaagcaataaattaacacaatattcaatatatgatttctattagtggaattcttaacatgtaccatgagggcacaagttaacattt 42596900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 235 - 322
Target Start/End: Original strand, 44829272 - 44829359
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaa 322  Q
    ||||||||||||| |||||||||||||| ||| |||| || ||||||||||||||| ||| ||||||||||| || |||| |||||||    
T  44829272 tttaagcatcccaaatttagtaattattctttaaaaaggtcaactattacaatttttaatacattcaatacacaactttttattaaaa 44829359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 205 - 301
Target Start/End: Original strand, 7212745 - 7212839
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattca 301  Q
    |||||||||||||||| ||| |   ||||||||||| ||| || |||||||||||||  ||||||||||||||| |||||||||| |||||||||||    
T  7212745 gtcttgttaacgagtgtcccgat--cactctttaagtatctcaaatttagtaattatacttttaaaaagttaacaattacaatttccaatgcattca 7212839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 5198873 - 5198793
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||| |||||||||||||||||||||||||||||  ||||||||||||| || |  ||||  ||||||||||||||    
T  5198873 aataaattaacacaatttccaatacataatttctattagtagaattcttaacatgtgtcacaagggtacaagttaacattt 5198793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 112 - 172
Target Start/End: Complemental strand, 48022587 - 48022527
Alignment:
Q  112 ccctaaggacacaagttaacatttccctaaacaatattctaaattaaatgcggtatctccc 172  Q
    ||||||||  |||||||||||||| ||||||||||||||||||||||| ||||||||||||    
T  48022587 ccctaagggtacaagttaacattttcctaaacaatattctaaattaaacgcggtatctccc 48022527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 249 - 336
Target Start/End: Complemental strand, 18433045 - 18432958
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    |||||||||||||| |||||||| ||||||| |||||||||| |||| |||||||| | || |||||||||| || ||| ||||||||    
T  18433045 atttagtaattattcttttaaaatgttaactgttacaatttttaatgtattcaatatacaacttttcattaagaatttaatatttaaa 18432958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 47588483 - 47588562
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatt 134  Q
    ||||||||| |||||||| ||||||||| ||||||||||  ||||||||||||| ||| || ||| ||||||||||||||    
T  47588483 aataaattaacacaattttcaatacatagtttctattagtagaattcttaacatgtgctcttagggcacaagttaacatt 47588562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 38788936 - 38789021
Alignment:
Q  49 ttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||| ||||||||| ||||||||||||||||||||| |||||||   ||||||||||||||  | ||||| |||||||||||||||    
T  38788936 ttaagtaataaattaacacaatttccaatacataattactattagtaaaattcttaacatat-acttaagggcacaagttaacattt 38789021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 339
Target Start/End: Complemental strand, 14746334 - 14746202
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatac 305  Q
    ||||||||||||||||||||  ||||||||||||| || ||| |||||| ||||||| | ||||||| | |||| ||| ||||||||||||  | |||||    
T  14746334 tcttgttaacgagtgcccctg-gacactctttaagtataccaaatttagcaattattttcttaaaaaatcaactgttataattttcaatgctatgaatac 14746236  T
Q  306 ataatttttcattaaaaacttattatttaaagtg 339  Q
    | || |||||||  | |||||| || ||||||||    
T  14746235 acaacttttcatatagaacttactaattaaagtg 14746202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 339
Target Start/End: Original strand, 34409705 - 34409837
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatac 305  Q
    ||||||||||||||||  |  ||| |||||||||||||   | ||||||||||| || ||||  ||| | || ||||| ||||| |||||||||||||||    
T  34409705 tcttgttaacgagtgcgtccgagatactctttaagcattttaaatttagtaattttttttttttaaaatcaattattataatttccaatgcattcaatac 34409804  T
Q  306 ataatttttcattaaaaacttattatttaaagtg 339  Q
    |  |||||||||||||||||||  ||||||||||    
T  34409805 a-catttttcattaaaaacttaccatttaaagtg 34409837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 200 - 297
Target Start/End: Complemental strand, 43025054 - 43024957
Alignment:
Q  200 ttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgca 297  Q
    ||||||||||||||||||||| | | | ||||||||||||| |||| |||||||  || |||| ||| ||||| |||| |||||||| ||||||||||    
T  43025054 ttaaggtcttgttaacgagtgtctccatgacactctttaaggatcctatatttaaaaaatattatttaaaaaaattaaatattacaaatttcaatgca 43024957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 145
Target Start/End: Original strand, 52141561 - 52141661
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaaac 143  Q
    ||||||| | |||||||||| || |||||||||| ||||||||  ||||  |||||||||| ||| |||| |||| |||||||||||||||||||| |||    
T  52141561 acattttgaacaataaattaacataatttccaatgcataattttcattattggaattcttatcatgtgccttaag-acacaagttaacatttcccttaac 52141659  T
Q  144 aa 145  Q
    ||    
T  52141660 aa 52141661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 31 - 138
Target Start/End: Original strand, 13352294 - 13352402
Alignment:
Q  31 gagggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagagg-aattcttaacatatgccctaaggacacaagtta 129  Q
    ||||||||| || ||||||| | |||||||||| |||||||| |||| |||||||| |||||  || || | |||| || |||||||||| |||||||||    
T  13352294 gagggagtattaaacattttgaacaataaattaacacaattttcaatgcataatttttattaatgggaaattttaaaatgtgccctaagggcacaagtta 13352393  T
Q  130 acatttccc 138  Q
    |||||||||    
T  13352394 acatttccc 13352402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 204 - 304
Target Start/End: Complemental strand, 26811368 - 26811269
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||| |||   || | ||||||| ||||| |||||||||||||||| ||||||||| |||||||||| ||||| |||| ||| ||||    
T  26811368 ggtcttgttaacgagtgtcccgg-gatattctttaaacatcctatatttagtaattattcttttaaaaaattaactattagaatttccaatacatacaat 26811270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 228 - 336
Target Start/End: Original strand, 45640540 - 45640647
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||| || |||||||||| |||||  || |||| ||| ||||||| || ||||| ||||||||||||||||| |||| || ||||||| |||||||||    
T  45640540 gacacttttaaagcatcccaaatttaagaactattctttcaaaaagtcaattattataattttcaatgcattcattacacaa-ttttcatcaaaaactta 45640638  T
Q  328 ttatttaaa 336  Q
     ||||||||    
T  45640639 ctatttaaa 45640647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 227 - 306
Target Start/End: Complemental strand, 42791256 - 42791177
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||||||||  | |||||  ||||||| ||||||||||| |||||| || ||||| |||||||||||||||    
T  42791256 agacactctttaagcatcttaaatttaacaattatttttttaaaaagtcaactatcactattttaaatgcattcaataca 42791177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 47370427 - 47370490
Alignment:
Q  66 acaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagtta 129  Q
    ||||||||||||||||||||||||| || ||||||||||| |||||   |||||||||||||||    
T  47370427 acaatttccaatacataatttctataagtggaattcttaatatatgtgataaggacacaagtta 47370490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 343
Target Start/End: Original strand, 3982240 - 3982372
Alignment:
Q  210 gttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataa 309  Q
    ||||||||||||| |  |||||||||||||  ||  || |||||||||||||| ||  ||||||| |||||||| |||||  |||||||| |||| | ||    
T  3982240 gttaacgagtgcctccgagacactctttaaaaatatcaaatttagtaattatttttagaaaaagtcaactattataatttataatgcattgaatagacaa 3982339  T
Q  310 tttttcattaaaaacttattatttaaagtgttta 343  Q
     |||| | |||||| ||| |||||||||||||||    
T  3982340 ctttt-aataaaaatttactatttaaagtgttta 3982372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 196 - 317
Target Start/End: Complemental strand, 33744280 - 33744159
Alignment:
Q  196 attgttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg 295  Q
    ||||||| ||||||||| | ||||||||||    ||||||||||||||   | | | |||||||||| ||||||||||| || |||| | ||||||||||    
T  33744280 attgttagggtcttgtttaggagtgccccttgagcactctttaagcattttaaaataagtaattatttttttaaaaagtcaaatatttcgattttcaatg 33744181  T
Q  296 cattcaatacataatttttcat 317  Q
    |||| | |||||| ||||||||    
T  33744180 cattgattacatattttttcat 33744159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 7648759 - 7648847
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||| |||||||||| | |||||||  | ||||||||| |||||| ||||| |||||||||| | |||||  |||||||||||||||    
T  7648759 ttttaaacaataaattaacgcaatttctgaaacataatttatattagtggaatccttaacatatactctaagagcacaagttaacattt 7648847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 228 - 312
Target Start/End: Complemental strand, 30822889 - 30822805
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataattt 312  Q
    |||||| |||||| ||  || |||||||||||||| | |||||||||||| |||||||||||||| |||||| || ||| |||||    
T  30822889 gacactttttaaggatttcaaatttagtaattattctcttaaaaagttaattattacaattttcattgcattgaaaacacaattt 30822805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 276 - 343
Target Start/End: Original strand, 36563745 - 36563810
Alignment:
Q  276 aactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||||| ||||||||||||||| |||||| |||||||||| |||||||  | ||||||||||||||    
T  36563745 aactattataattttcaatgcattaaatacacaatttttcataaaaaact--tcatttaaagtgttta 36563810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 44329484 - 44329568
Alignment:
Q  255 taattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||| ||||||||||| || ||||| |||||||| |||||| |||| |||| |||| |||||||| ||  |||||||||||    
T  44329484 taattattcttttaaaaagtcaattattataattttcagtgcatttaatatataactttttattaaaaattttatatttaaagtg 44329568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 604508 - 604445
Alignment:
Q  264 ttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||| || ||||| ||||| ||||||| |||||||| ||||||||||||| ||||||    
T  604508 ttttaaaaagtcaattattataatttccaatgcactcaatacacaatttttcattaagaactta 604445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 5423831 - 5423764
Alignment:
Q  256 aattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    ||||||| ||| |||||||||| || | |||||||||||||||| ||||||||| ||||||| |||||    
T  5423831 aattattctttaaaaaagttaaatagttcaattttcaatgcattaaatacataagttttcataaaaaa 5423764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 276 - 343
Target Start/End: Complemental strand, 6883193 - 6883126
Alignment:
Q  276 aactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||||||||||||||  |||||||||| ||||||| |||||||  |||| |||| ||||||||||||||    
T  6883193 aactattacaatttcaaatgcattcattacataacttttcatataaaatttatcatttaaagtgttta 6883126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 213 - 343
Target Start/End: Original strand, 8372973 - 8373094
Alignment:
Q  213 aacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataattt 312  Q
    |||||||| |||  || |||||||||| ||||| | ||||| |||||||| ||||||||| | ||||||||||||          |||||||||| ||||    
T  8372973 aacgagtgtcccagaggcactctttaaacatcctaaatttaataattattcttttaaaaaatcaactattacaat---------cttcaatacatcattt 8373063  T
Q  313 ttcattaaaaacttattatttaaagtgttta 343  Q
    |||| |||||||||| ||||||| |||||||    
T  8373064 ttcaataaaaacttactatttaacgtgttta 8373094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 230 - 335
Target Start/End: Complemental strand, 1048780 - 1048677
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||| ||| ||| |  ||||||| ||| |||||||||| || | ||||||||||||| || ||| |||||||||||| ||||||  ||||    
T  1048780 cactctttaagcataccaaattaaaaaattattcttt-aaaaagttaaatagttcaattttcaatgcgttgaatgcataatttttca-taaaaagatatt 1048683  T
Q  330 atttaa 335  Q
    ||||||    
T  1048682 atttaa 1048677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 4051693 - 4051746
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||||||| |||||||| ||||| ||||||||||||||  |||||||||||||    
T  4051693 aataaattaacacaattttcaatatataatttctattagtagaattcttaacat 4051746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 53 - 114
Target Start/End: Original strand, 13132197 - 13132258
Alignment:
Q  53 gcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccc 114  Q
    ||||||||||| | |||||||| | |||||||||||||||| ||||| |||||||| |||||    
T  13132197 gcaataaattaacgcaatttccgaaacataatttctattagtggaatccttaacatgtgccc 13132258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 47 - 108
Target Start/End: Complemental strand, 51672802 - 51672741
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    |||| |||||||||||| | |||||||| | |||||||||||||||| ||||| ||||||||    
T  51672802 ttttgagcaataaattaacgcaatttccgagacataatttctattagtggaatccttaacat 51672741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 249 - 325
Target Start/End: Original strand, 17552847 - 17552923
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaact 325  Q
    ||||| |||||||| ||||||||||| |||||||| |||||| |||| ||| |||| | |||||||  |||||||||    
T  17552847 atttaataattatttttttaaaaagtcaactattataatttttaatgtatttaatatacaattttttgttaaaaact 17552923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 25409659 - 25409699
Alignment:
Q  52 agcaataaattaccacaatttccaatacataatttctatta 92  Q
    |||||||||||| |||||||| |||||||||||||||||||    
T  25409659 agcaataaattaacacaattttcaatacataatttctatta 25409699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 27211390 - 27211298
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||| |||||||||| || ||||| | |||||||||||||||||| |||||  | ||||| | || ||||| || ||||||| ||||||||    
T  27211390 ttttaaacaataaattaacataattttcgatacataatttctattagtggaatcttgaacatgtaccttaagggcataagttaatatttccct 27211298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 92
Target Start/End: Original strand, 48722762 - 48722810
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctatta 92  Q
    ||||||| ||||||| |||| |||||||||||||||||||||| |||||    
T  48722762 acattttgagcaatacattaacacaatttccaatacataatttttatta 48722810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 83 - 135
Target Start/End: Complemental strand, 50746068 - 50746016
Alignment:
Q  83 atttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||| |||||| ||||| |||||||| |||| |||||||||||||||||||||    
T  50746068 atttatattagtggaatccttaacatgtgccttaaggacacaagttaacattt 50746016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 369
Target Start/End: Original strand, 31889186 - 31889300
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataa-tttttcattaaaaacttattatttaaagtgtttaga-agtgccc--ga 354  Q
    |||| |||| |||||| ||||||||| ||||  |||||||| |||||| || ||||||||||||||||||  ||||||| || ||| | ||||| |  ||    
T  31889186 tattttttttaaaagtcaactattacgatttctaatgcatttaatacacaactttttcattaaaaacttaccatttaaaatgcttaaagagtgcactaga 31889285  T
Q  355 aacactcgttaacat 369  Q
    |||||||||||||||    
T  31889286 aacactcgttaacat 31889300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 4851380 - 4851247
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||||| |   ||||||||||||||||  ||  ||||  ||||||| ||| ||||||| ||||||||||||||  |||||| | | ||    
T  4851380 gtcttgttaacgagtgcctccgggacactctttaagcatgtcaattttaaaaattattcttt-aaaaagtcaactattacaatttcaaatgcacttacta 4851282  T
Q  305 cataatttttcattaaaaacttattatttaaagtg 339  Q
    |  || ||||||| || |||||| || ||||||||    
T  4851281 cccaacttttcataaagaacttactaattaaagtg 4851247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 12521378 - 12521329
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattag 93  Q
    ||||||| |||||||||||| || |||||  |||||||||||||||||||    
T  12521378 acattttgagcaataaattaacataatttttaatacataatttctattag 12521329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 230 - 299
Target Start/End: Original strand, 39973887 - 39973956
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    |||||||||||||| | | ||| |||||||||| |||||||| |||||   || ||||||||||||||||    
T  39973887 cactctttaagcatgctaaattaagtaattattcttttaaaatgttaaagttttcaattttcaatgcatt 39973956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 200 - 297
Target Start/End: Complemental strand, 42573910 - 42573813
Alignment:
Q  200 ttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgca 297  Q
    ||||||| |||||||| |||||| |   | |||||||||||||| | | ||| |||||||||| |||||||| |||||   || ||||||||||||||    
T  42573910 ttaaggttttgttaacaagtgcctccggggcactctttaagcatgctaaattaagtaattattcttttaaaatgttaaggttttcaattttcaatgca 42573813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 46 - 90
Target Start/End: Original strand, 9641845 - 9641889
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctat 90  Q
    |||||| | ||||||||| ||||||||||||||| ||||||||||    
T  9641845 attttatgaaataaattagcacaatttccaatacttaatttctat 9641889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 142
Target Start/End: Complemental strand, 14149483 - 14149439
Alignment:
Q  98 attcttaacatatgccctaaggacacaagttaacatttccctaaa 142  Q
    ||||||| | |||||||||||| |||||||||| |||||||||||    
T  14149483 attcttatcttatgccctaagggcacaagttaatatttccctaaa 14149439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 100 - 136
Target Start/End: Complemental strand, 32544807 - 32544771
Alignment:
Q  100 tcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||||||| |||||||||| ||||||||||||||||    
T  32544807 tcttaacatgtgccctaagggcacaagttaacatttc 32544771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 272
Target Start/End: Complemental strand, 34861349 - 34861282
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaa 272  Q
    |||||||||||||||||||||   | |||||||||||||| | | ||| |||||||||| |||||||||    
T  34861349 ggtcttgttaacgagtgccccgggggcactctttaagcattctaaattaagtaattatt-ttttaaaaa 34861282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 52141506 - 52141474
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacat 133  Q
    ||||||||||||||||||| |||||||||||||    
T  52141506 cttaacatatgccctaagggcacaagttaacat 52141474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 88; Significance: 5e-42; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 62662 - 62527
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||| | | | |  |||||||||||||| ||||||||||||||||| ||||||||||| ||||||||| ||||||||||||||||||    
T  62662 ggtcttgttaacgagtgtctccagggtactctttaagcatctcatatttagtaattattcttttaaaaagtcaactattacgattttcaatgcattcaat 62563  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||||||||||| |||||||||||| |||||||||||    
T  62562 acataattttttattaaaaacttactatttaaagtg 62527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 88; Significance: 5e-42; HSPs: 43)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 18229738 - 18229604
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||||| |||  ||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| |||| ||||||||    
T  18229738 ggtcttgttaacgagtgcccccaagt-actctttaagcatcccaaatttagtaattattcttttaaaaagttaactattacaatttccaatacattcaat 18229640  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    | | ||||||||||||||||||||  ||||||||||    
T  18229639 aaacaatttttcattaaaaacttaccatttaaagtg 18229604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 30501278 - 30501142
Alignment:
Q  203 aggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaa 302  Q
    |||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| |||| |||||||    
T  30501278 aggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaa 30501179  T
Q  303 tacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| || |||||||| |||||||| |||||||||||    
T  30501178 tacacaacttttcatttaaaacttactatttaaagtg 30501142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 203 - 339
Target Start/End: Complemental strand, 30541621 - 30541485
Alignment:
Q  203 aggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaa 302  Q
    |||||||||||||||||||||| | | |||||||||||||||||| |||||||||||||| ||||||||||| || ||||||||||| |||| |||||||    
T  30541621 aggtcttgttaacgagtgcccccagggcactctttaagcatcccaaatttagtaattattcttttaaaaagtcaattattacaatttccaatacattcaa 30541522  T
Q  303 tacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| || |||||||| |||||||| |||||||||||    
T  30541521 tacacaacttttcatttaaaacttactatttaaagtg 30541485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 7719173 - 7719308
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||| ||||||||||||||   |||||||||||||||| |||||||||  ||||||| ||||||||| | |||||||||||||| ||||  |||||||    
T  7719173 ggtctttttaacgagtgcccccgggacactctttaagcataccatatttaaaaattattcttttaaaaaatcaactattacaatttccaatatattcaat 7719272  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || |||||||||||||||||||||||||||||    
T  7719273 acacaacttttcattaaaaacttattatttaaagtg 7719308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 233 - 339
Target Start/End: Complemental strand, 9276688 - 9276582
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatt 332  Q
    |||| |||||||||| |||||||||||||| ||||||||| | |||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  9276688 tcttcaagcatcccaaatttagtaattatttttttaaaaaatcaactattataattttcaatgcattcaatacataacttttcattaaaaacttactatt 9276589  T
Q  333 taaagtg 339  Q
    |||||||    
T  9276588 taaagtg 9276582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 16667403 - 16667294
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||||||| || ||||| |||||||| ||||||||||| || ||||||||||| |||| ||||||||||| |||||||||||||||||||| |    
T  16667403 cactctttaagcatcacaaatttaataattattcttttaaaaagtcaattattacaatttccaatacattcaatacacaatttttcattaaaaacttact 16667304  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  16667303 atttaaagtg 16667294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 30104799 - 30104912
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||||| ||||||||| |||| ||||||||||| ||| |||||||||| |||||||||||||||| || |||||||||||||||||      
T  30104799 cactctttaagcatcccaaatttagtaactatttttttaaaaagtcaacaattacaatttccaatgcattcaatacacaacttttcattaaaaacttacc 30104898  T
Q  330 atttaaagtgttta 343  Q
    | ||||||||||||    
T  30104899 acttaaagtgttta 30104912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 13479992 - 13480123
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaag-ttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||||||| ||| ||||||||||||||  || |||||||||||||| ||| |||||  |||||||||| ||||||||||||||||||||||    
T  13479992 ttgttaacgagtgcccccaag-cactctttaagcatttcaaatttagtaattattttttaaaaaaaattaactattataattttcaatgcattcaataca 13480090  T
Q  307 taatttttcattaaaaacttattatttaaagtg 339  Q
     ||| ||| |||||||| |||||||||||||||    
T  13480091 caatattttattaaaaatttattatttaaagtg 13480123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 227 - 343
Target Start/End: Complemental strand, 34899250 - 34899134
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||||||||||||||||| || ||||||||||| ||||||||||  || |||||||||||  |||||||| |||| |||| |||||||| |||||||    
T  34899250 agacactctttaagcatcccaaatatagtaattattcttttaaaaagacaattattacaatttctaatgcatttaatatataacttttcatttaaaactt 34899151  T
Q  327 attatttaaagtgttta 343  Q
    | |||||||||||||||    
T  34899150 actatttaaagtgttta 34899134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 40530549 - 40530449
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||||||||| |||| ||||||||||||||||| |||||||||||||||||| |||||||  ||| ||||||||||| || | ||||||||||||||    
T  40530549 agacactctttaaacatctcatatttagtaattattattttaaaaagttaactatcacaatttctaattcattcaatacacaactattcattaaaaactt 40530450  T
Q  327 a 327  Q
    |    
T  40530449 a 40530449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 228 - 343
Target Start/End: Original strand, 3140807 - 3140922
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||| ||||||| ||||  | ||||| |||||||| ||||||||||| ||||||||||||||||||| |||| |||| | || |||| ||| ||||||||    
T  3140807 gacattctttaaacatcataaatttaataattattcttttaaaaagtcaactattacaattttcaattcatttaatatacaactttttatttaaaactta 3140906  T
Q  328 ttatttaaagtgttta 343  Q
    ||||||||||||||||    
T  3140907 ttatttaaagtgttta 3140922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 249 - 336
Target Start/End: Original strand, 8221136 - 8221223
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    |||||| ||||||| | ||||||||| ||||||||||| ||||||||||||||||||| ||||||| |||||||||||| ||||||||    
T  8221136 atttagcaattattctcttaaaaagtcaactattacaactttcaatgcattcaatacacaattttttattaaaaacttactatttaaa 8221223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 207 - 378
Target Start/End: Complemental strand, 39558900 - 39558727
Alignment:
Q  207 cttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    |||||||| |||||||||   ||||||||||||| || ||||||||||||||||||  |||||||| | |||| ||||||||| |||||||||  |||||    
T  39558900 cttgttaaagagtgcccccg-gacactctttaagtattccatatttagtaattattcatttaaaaattcaactgttacaatttccaatgcatttgataca 39558802  T
Q  307 taatttttcattaaaaacttattatttaaagtg-tttagaagtgc-ccgaa-acactcgttaacatctctcttat 378  Q
      | |||||| |||||||||| |||||||| || || |||||||| ||||| |||||||||||||| || |||||    
T  39558801 cgacttttcaataaaaacttactatttaaaatgcttaagaagtgctccgaagacactcgttaacatttcccttat 39558727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 112597 - 112488
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||  | | |||||||||||| |||| |||||| ||||  |||||||||||||| ||| |||||| |||||||||||||||| || ||    
T  112597 cactctttaagcatcataaaattagtaattattcttttgaaaagtcaactgatacaattttcaatgtatttaatacacaatttttcattaaaaatttgtt 112498  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  112497 atttaaagtg 112488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 3344951 - 3345042
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||||||| | ||||||| || |||||||||||||||  | ||| |||||||| |||||||||||| ||||||||||||||||    
T  3344951 ttttaagcaataaattaacgcaatttctaaaacataatttctattaatgaaatccttaacatgtgccctaaggacgcaagttaacatttccc 3345042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 17692262 - 17692366
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattta 334  Q
    ||||||||||| | |||||||||||||| | ||||||||| |||| ||||||||||||||||| | | |||| || |||||||||||||| || |||||     
T  17692262 tttaagcatcctaaatttagtaattattctcttaaaaagtcaactgttacaattttcaatgcaattactacacaacttttcattaaaaacctactatttt 17692361  T
Q  335 aagtg 339  Q
    |||||    
T  17692362 aagtg 17692366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 256 - 343
Target Start/End: Original strand, 8208200 - 8208287
Alignment:
Q  256 aattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||||||| ||||||||||| || |||||||||||| |||||||||| ||||||| |||||||  ||||||||| |||||| |||||||    
T  8208200 aattattcttttaaaaagtcaattattacaatttttaatgcattcattacataacttttcatataaaacttatcatttaatgtgttta 8208287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 270 - 336
Target Start/End: Complemental strand, 23117298 - 23117232
Alignment:
Q  270 aaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    ||||||||| |||||||||| |||| |||| ||||||||||||||||||||||||||| ||||||||    
T  23117298 aaagttaacaattacaatttccaatacatttaatacataatttttcattaaaaacttactatttaaa 23117232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 41583512 - 41583614
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   | ||||||||||| |||||| |||||| |||||||  || |||||||||| |||||||| || ||||||||| |||    
T  41583512 ggtcttgttaacgagtgcccccgggtcactctttaaggatcccaaatttagaaattattccttcaaaaagttaaatattacaaattccaatgcattgaat 41583611  T
Q  304 aca 306  Q
    |||    
T  41583612 aca 41583614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 15720062 - 15720175
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||| |||||| ||| |||||  ||||||| ||||||||||| |||||||||||||| ||||| | | |||||| || ||||||| || |||||| |    
T  15720062 cactcttcaagcataccaaatttatcaattattcttttaaaaagtcaactattacaatttccaatgaacttaatacacaacttttcataaagaacttact 15720161  T
Q  330 atttaaagtgttta 343  Q
    | ||||||||||||    
T  15720162 aattaaagtgttta 15720175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 228 - 325
Target Start/End: Original strand, 41047979 - 41048076
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaact 325  Q
    |||||||||||||||||  | |||||| ||||||| |||||||| ||||| ||||| ||||| ||||||||| ||| || | ||||||||||||||||    
T  41047979 gacactctttaagcatcataaatttagcaattatttttttaaaaggttaattattataatttccaatgcattaaatgcacactttttcattaaaaact 41048076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 5402789 - 5402873
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||||||||||| |||| ||||||  |||||| ||||||| |||| |||||  ||||||||||||||||||    
T  5402789 aataaattaacacaatttccaatacacaattactattaatggaatttttaacatgtgccttaaggggacaagttaacatttccct 5402873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 32135895 - 32135804
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    |||| |||||||||||| | |||||| | | |||||||||||||||| ||||| |||||||| |||||||||  || |||||||||||||||    
T  32135895 ttttgagcaataaattatcgcaatttacgagacataatttctattagtggaatccttaacatgtgccctaagagcagaagttaacatttccc 32135804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 18963826 - 18963900
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||| ||   ||||||||||||||||||||||||||||||| |||||| ||||||| || |||||    
T  18963826 atttagtaattattcttgagaaaagttaactattacaattttcaatgcattaaatacacaattttttataaaaaa 18963900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 46 - 138
Target Start/End: Complemental strand, 21369203 - 21369110
Alignment:
Q  46 attttaagc-aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||| ||||||||| |||||||| |||||||| || |||||||| | ||| ||||||||  ||| ||||| ||||||||||||||||||    
T  21369203 attttaagctaataaattaacacaattttcaatacatgatatctattagtgaaatccttaacatgcgccttaagggcacaagttaacatttccc 21369110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 231 - 323
Target Start/End: Complemental strand, 2918707 - 2918615
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||  || ||||| |||||||| ||| |||| || |||||||| ||||| ||||||||| |||||| || |||||||||||||    
T  2918707 actctttaagcatttcaaatttaataattattttttaaaaatgtcaactattataatttccaatgcatttaatacacaacttttcattaaaaa 2918615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 47 - 117
Target Start/End: Complemental strand, 2903438 - 2903368
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaa 117  Q
    |||| |||||||||||| || ||||||| | ||||||||||||||||  ||||||||||||| ||||||||    
T  2903438 ttttgagcaataaattaacataatttccgagacataatttctattagtagaattcttaacatgtgccctaa 2903368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 86 - 136
Target Start/End: Original strand, 13789882 - 13789932
Alignment:
Q  86 tctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||| ||||| |||||||| |||||||||||||||||||||||||||    
T  13789882 tctattagtggaatccttaacatgtgccctaaggacacaagttaacatttc 13789932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 55 - 141
Target Start/End: Complemental strand, 25836992 - 25836906
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaa 141  Q
    ||||||| | |||| ||||||||||||||||  |||||| |||||||||||||| || | |||||| |||| |||||||||| ||||    
T  25836992 aataaatgaacacactttccaatacataattattattagtggaattcttaacatgtgacataaggatacaaattaacatttctctaa 25836906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 17566771 - 17566686
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| | ||||| || ||||||| ||||||||||||  |||||||||| || ||| |||||| ||||||||| |||||||||    
T  17566771 caataaataaacacaaatttcaatacaaaatttctattagtagaattcttaatatgtgcactaagggcacaagttatcatttccct 17566686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 227 - 327
Target Start/End: Complemental strand, 5815185 - 5815085
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    |||||||||||||||| |  | ||||||||||||||  |||||||| |||||||  ||||||| |||| ||||||| | | |  ||||||||||||||||    
T  5815185 agacactctttaagcaccttaaatttagtaattattcatttaaaaatttaactaccacaatttccaatacattcaacatacatcttttcattaaaaactt 5815086  T
Q  327 a 327  Q
    |    
T  5815085 a 5815085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 16285929 - 16286012
Alignment:
Q  52 agcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||||||| |||||||| |||| ||||||||||||||  | |||||||||||| ||  ||| ||||||||||||| |||||    
T  16285929 agcaataaattaacacaattttcaatgcataatttctattaatgaaattcttaacatgtg-tctacggacacaagttaatatttc 16286012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 100 - 139
Target Start/End: Complemental strand, 15270391 - 15270352
Alignment:
Q  100 tcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  15270391 tcttaacatatgccctaaggacacaagttaacattaccct 15270352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 291 - 339
Target Start/End: Original strand, 7968446 - 7968494
Alignment:
Q  291 caatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    ||||||||| |||||| || ||||||||||||||||| |||||||||||    
T  7968446 caatgcatttaatacacaacttttcattaaaaacttactatttaaagtg 7968494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 108
Target Start/End: Original strand, 10044234 - 10044298
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||||| |||||||||||| ||||| || |||||||||||||||||||  |  |||||||||||    
T  10044234 acattttgagcaataaattaacacaactttcaatacataatttctattaatgacattcttaacat 10044298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 14043410 - 14043482
Alignment:
Q  264 ttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    ||||||||||| |||||| |||||||||| | |||| |||||| ||||||| ||  |||||||| ||||||||    
T  14043410 ttttaaaaagtcaactatcacaattttcattacatttaatacacaattttttatataaaacttaatatttaaa 14043482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 226 - 290
Target Start/End: Original strand, 25693837 - 25693900
Alignment:
Q  226 aagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaatttt 290  Q
    |||||||| ||||||||||||| |||||||| ||||| ||| |||||||||| ||||| ||||||    
T  25693837 aagacact-tttaagcatcccagatttagtagttattctttcaaaaagttaattattataatttt 25693900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 47 - 134
Target Start/End: Original strand, 25037330 - 25037417
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatt 134  Q
    |||| |||||||||||| | |||||| | | | ||||||||||| ||  |||| ||||| ||||| ||||| ||||||||||||||||    
T  25037330 ttttgagcaataaattaacgcaattttcgaaatataatttctatcagtagaatccttaatatatgtcctaatgacacaagttaacatt 25037417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 205 - 299
Target Start/End: Original strand, 779056 - 779149
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    ||||||||||||||||||||   | |||||||||| ||| | | | |||||||||||| |||||||||||||| | || | |||| |||||||||    
T  779056 gtcttgttaacgagtgccccctgggcactctttaaacattcaaaaattagtaattatt-ttttaaaaagttaaatgtttcgatttccaatgcatt 779149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 261 - 306
Target Start/End: Original strand, 7606936 - 7606981
Alignment:
Q  261 ttgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    |||||||||||| |||| |||||||| |||||||||||| ||||||    
T  7606936 ttgttttaaaaaattaaatattacaaatttcaatgcattaaataca 7606981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 289
Target Start/End: Complemental strand, 34032227 - 34032142
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattt 289  Q
    ||||||||||||||||| || |  | |||||||||||||| | | | | |||||||||| ||| |||||||||| |||| ||||||    
T  34032227 ggtcttgttaacgagtgtccttggggcactctttaagcattctaaaataagtaattattctttaaaaaagttaaatatttcaattt 34032142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 48 - 92
Target Start/End: Original strand, 5599 - 5643
Alignment:
Q  48 tttaagcaataaattaccacaatttccaatacataatttctatta 92  Q
    ||||| |||||||||| |||||||| |||||| ||||||||||||    
T  5599 tttaaacaataaattaacacaattttcaatacgtaatttctatta 5643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 591361 - 591325
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaag 240  Q
    ||||||||||||||||||||  |||||||||||||||    
T  591361 ggtcttgttaacgagtgccctaaagacactctttaag 591325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 8297840 - 8297975
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   | |||||||||||||||||| |||||||||||||| |||||||| || |||| ||||||||| |||||||||||||    
T  8297840 ggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaattattcttttaaaatgtcaactgttacaatttccaatgcattcaat 8297939  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| |||||||||||||||||||| |||||||||||    
T  8297940 acacaatttttcattaaaaacttactatttaaagtg 8297975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 204 - 343
Target Start/End: Complemental strand, 7444523 - 7444383
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaa-gttaactattacaattttcaatgcattcaa 302  Q
    |||||||||||||||||| ||  | ||||| ||||||||||||| |||||||||||||  ||||||||| || |||||||||||||||||||||||||||    
T  7444523 ggtcttgttaacgagtgctcccgatacactttttaagcatcccaaatttagtaattatacttttaaaaaagtcaactattacaattttcaatgcattcaa 7444424  T
Q  303 tacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||| || ||||| ||||||||||| |||||||||||||||    
T  7444423 tacacaacttttctttaaaaacttagtatttaaagtgttta 7444383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 227 - 339
Target Start/End: Complemental strand, 7852658 - 7852546
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||||||||||||||| | |||||||||||||| ||||||||| |||||||||||||||||||||||||| |||||| || ||||||||||||||||    
T  7852658 agacactctttaagcatcctaaatttagtaattattcttttaaaaaattaactattacaattttcaatgcatttaatacacaacttttcattaaaaactt 7852559  T
Q  327 attatttaaagtg 339  Q
    | |||||||||||    
T  7852558 actatttaaagtg 7852546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 35777836 - 35777701
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| ||||||   | || ||||||||| ||||||| |||||||||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  35777836 ggtcttgttaactagtgccttcaggatactctttaaccatcccaaatttagtaattattcttttaaaaagttaactattacaatttctaatgcattcaat 35777737  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || |||||||||||||||||  ||||||||||    
T  35777736 acacaacttttcattaaaaacttaccatttaaagtg 35777701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 44 - 142
Target Start/End: Complemental strand, 10109310 - 10109212
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaaa 142  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||||||||    
T  10109310 acattttgagcaataaattaacacaattttcaatacataatttctattagtggaattcttaatatgtgccctaaggacacaagttaacatttccctaaa 10109212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 196 - 336
Target Start/End: Original strand, 41462010 - 41462150
Alignment:
Q  196 attgttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg 295  Q
    ||||||| | ||||||||||||||| ||||    ||||||||||||||   |||||||||||||||| ||||||||||| ||||||||||||||   |||    
T  41462010 attgttaggatcttgttaacgagtgtccctggagcactctttaagcattttatatttagtaattattcttttaaaaagtcaactattacaatttcttatg 41462109  T
Q  296 cattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    |||| ||||||||||||||||||||||||||| ||||||||    
T  41462110 catttaatacataatttttcattaaaaacttactatttaaa 41462150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 47995847 - 47995739
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    ||||||||||||| | | |||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||  |    
T  47995847 actctttaagcattctaaatttagtaattactcttttaaaaagttaattattacaattttcaatgcattcaatacataacttttcattaaaaacttacaa 47995748  T
Q  331 tttaaagtg 339  Q
    |||||||||    
T  47995747 tttaaagtg 47995739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 22409413 - 22409508
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||||||||||||||| ||||||||||||||||| |||||||||||  ||||||||||||| |||||||||| |||||||||||||||||||    
T  22409413 acattttaagcaataaattaacacaatttccaatacatgatttctattagtagaattcttaacatgtgccctaagggcacaagttaacatttccct 22409508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 228 - 343
Target Start/End: Original strand, 51834907 - 51835022
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||||| | |||||| ||||||| ||||||||||| |||||||| ||||| ||||||||| |||||| || ||||||||||||| |||    
T  51834907 gacactctttaagcatcctaaatttagcaattattcttttaaaaagtcaactattataatttccaatgcattaaatacacaacttttcattaaaaattta 51835006  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  51835007 ctatttaaagtgttta 51835022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 230 - 336
Target Start/End: Complemental strand, 27953151 - 27953046
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||      
T  27953151 cactctttaagcatctcaaatttagta-ttattattttaaaaagttaactattacaattttcaatgcattcaatacacaacttttcgttaaaaacttacc 27953053  T
Q  330 atttaaa 336  Q
    |||||||    
T  27953052 atttaaa 27953046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 24229759 - 24229648
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||| || || | |||||||||||||| |||| |||||| || ||| ||||||||||||||||| |||||| |||||||||||||||||||     
T  24229759 gacactctttaaacaaccaaaatttagtaattattctttttaaaagtaaattatcacaattttcaatgcatttaatacacaatttttcattaaaaacttt 24229660  T
Q  328 ttatttaaagtg 339  Q
    ||||||||||||    
T  24229659 ttatttaaagtg 24229648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 25115376 - 25115262
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||||| ||||||| | |||||| || |||| | ||||||||||    
T  25115376 gacactctttaagaatccaaaatttagtaattattattttaaaaagttaactattacaatttccaatgcagtgaatacacaacttttta-taaaaactta 25115278  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  25115277 ctatttaaagtgttta 25115262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 45900286 - 45900151
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||  || |||||||||||||||| | |||||| ||||||| ||||| ||||| |||||| ||||||| |||||||||||||    
T  45900286 ggtcttgttaacgagtgcccccgaggcactctttaagcatcctaaatttagcaattattcttttataaagtcaactatcacaatttccaatgcattcaat 45900187  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || |||||||   ||||||| || ||||||||    
T  45900186 acacaacttttcatatgaaacttactaattaaagtg 45900151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 201 - 339
Target Start/End: Complemental strand, 24175538 - 24175401
Alignment:
Q  201 taaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattc 300  Q
    |||||||||||||||||||| || || |||||||||||||||||| | ||||||||| |||| |||| |||||| ||||||||||||||| ||||||||     
T  24175538 taaggtcttgttaacgagtgtccttaggacactctttaagcatcctaaatttagtaaatattctttt-aaaagtaaactattacaattttaaatgcattt 24175440  T
Q  301 aatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| || ||||| |  ||||||||  ||||||||||    
T  24175439 aatacacaacttttcgtacaaaacttaccatttaaagtg 24175401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 209 - 338
Target Start/End: Original strand, 37440800 - 37440929
Alignment:
Q  209 tgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacata 308  Q
    ||||||||||||  || | ||||||||| || ||| | | |||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||||    
T  37440800 tgttaacgagtgttcccaggacactcttgaaacatgctaaatttagtaattattattttaaaaagtcaactattacaattttcaatgtgttcaatacata 37440899  T
Q  309 atttttcattaaaaacttattatttaaagt 338  Q
    ||||||||||| ||| |||  |||||||||    
T  37440900 atttttcattataaatttaccatttaaagt 37440929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 230 - 326
Target Start/End: Original strand, 20394633 - 20394728
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    |||||||||||||||||| |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||| |  ||||||||||||||||    
T  20394633 cactctttaagcatcccaaatttagtaattattcttttaaaaagtgaactattacaatttccaatacattcaataca-acattttcattaaaaactt 20394728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 235 - 343
Target Start/End: Original strand, 50426989 - 50427097
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattta 334  Q
    |||||||||| || |||||||||||||| |||| |||||| |||||||||||||| ||||||| |||| ||| || ||||||||||||| ||| ||||||    
T  50426989 tttaagcatctcaaatttagtaattattcttttgaaaagtcaactattacaatttccaatgcaatcaacacacaacttttcattaaaaatttactattta 50427088  T
Q  335 aagtgttta 343  Q
    |||||||||    
T  50427089 aagtgttta 50427097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 56 - 137
Target Start/End: Original strand, 26533186 - 26533267
Alignment:
Q  56 ataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    |||||||| |||||||||| |||||||||||||||||| |||||||||||||| |||| ||||| |||||||||||||||||    
T  26533186 ataaattaacacaatttccgatacataatttctattagtggaattcttaacatgtgccataagggcacaagttaacatttcc 26533267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 31174762 - 31174649
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||  | |||| ||||||||| |||||||||||||||| ||||||||||||||  ||||| |||| || ||||||||||||| ||||     
T  31174762 cactctttaagcatctaaaattttgtaattattcttttaaaaagttaactgttacaattttcaatatattcattacacaacttttcattaaaaatttatc 31174663  T
Q  330 atttaaagtgttta 343  Q
    ||||||||| ||||    
T  31174662 atttaaagtattta 31174649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 49400582 - 49400716
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| ||  || |||| ||||||||||| | |||||||||||||| ||||||||| | |||||||||||||| ||||| ||| |||    
T  49400582 ggtcttgttaacgagtgctccagag-cactatttaagcatcctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatgtatttaat 49400680  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    |||  | ||||||||||||  || ||||||||||||    
T  49400681 acacgacttttcattaaaattttgttatttaaagtg 49400716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 24 - 138
Target Start/End: Original strand, 26889921 - 26890035
Alignment:
Q  24 agggacggagggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacac 123  Q
    ||||||||||| |||| ||||  |||| |||||| ||||| | |||||| | | |||||||||||||||| | ||| |||||||| ||||||||||||||    
T  26889921 agggacggaggtagtattagattttttgagcaattaattaacgcaattttcgagacataatttctattagtgaaatccttaacatgtgccctaaggacac 26890020  T
Q  124 aagttaacatttccc 138  Q
    |||||||||||||||    
T  26890021 aagttaacatttccc 26890035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 26 - 136
Target Start/End: Complemental strand, 38793831 - 38793721
Alignment:
Q  26 ggacggagggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaa 125  Q
    ||||||| |||||| || |||  ||||||||||||||| |||||||| ||||||| |||| ||||||| ||||||||||||||  | ||||||| |||||    
T  38793831 ggacggaaggagtattaaacaacttaagcaataaattaacacaatttacaatacacaattactattagtggaattcttaacatgagtcctaagggcacaa 38793732  T
Q  126 gttaacatttc 136  Q
    |||||||||||    
T  38793731 gttaacatttc 38793721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 327
Target Start/End: Complemental strand, 49084512 - 49084414
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg-cattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||  |||| | |||||||||||||| ||||||||||| ||||||||||||||||||||  |||||||||| || |||||||||||||||||    
T  49084512 cactctttaattatcctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgaaattcaatacacaacttttcattaaaaactta 49084414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 237 - 339
Target Start/End: Complemental strand, 50341971 - 50341869
Alignment:
Q  237 taagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    ||||||| ||| |||||||||||||| ||||||||||| |||||||||||||| ||| |||||||||||| || |||||||| |||| ||| ||| ||||    
T  50341971 taagcattccaaatttagtaattattcttttaaaaagtcaactattacaatttccaacgcattcaatacacaacttttcatttaaaatttactatataaa 50341872  T
Q  337 gtg 339  Q
    |||    
T  50341871 gtg 50341869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 8261139 - 8261212
Alignment:
Q  266 ttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  8261139 ttaaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtg 8261212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 266 - 339
Target Start/End: Original strand, 8274556 - 8274629
Alignment:
Q  266 ttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    ||||||||| |||| ||||||||||||||||||| ||||||||| ||||||||||||||||| |||||||||||    
T  8274556 ttaaaaagtcaactgttacaattttcaatgcatttaatacataacttttcattaaaaacttactatttaaagtg 8274629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 31429280 - 31429381
Alignment:
Q  238 aagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaag 337  Q
    |||||| |||||||||  ||||||| ||||||||| | |||||||||||||| |||||||||||||||| || |||||||| |||||||| || ||||||    
T  31429280 aagcattccatatttaaaaattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttcatttaaaacttactaattaaag 31429379  T
Q  338 tg 339  Q
    ||    
T  31429380 tg 31429381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 265 - 330
Target Start/End: Original strand, 36702814 - 36702879
Alignment:
Q  265 tttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    |||||||||| || |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  36702814 tttaaaaagtcaattattacaattttcaatgcattcaatacacaatttttcattaaaaacttatta 36702879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 52 - 136
Target Start/End: Original strand, 4960446 - 4960534
Alignment:
Q  52 agcaataaattaccacaatttccaatacataatttctattagaggaattc----ttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||||||| |||||||| |||||| ||||||||||||| |||||||    ||||||| |||||||||||||||||||||||||||    
T  4960446 agcaataaattaacacaattttcaatacgtaatttctattagtggaattcattcttaacatgtgccctaaggacacaagttaacatttc 4960534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 343
Target Start/End: Original strand, 31690353 - 31690490
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||| |||||   ||||||||||||  || ||| ||||| |||||||| ||| ||||||| |||| || |||||||||||||||| ||||    
T  31690353 gtcttgttaacgagcgcccccgggacactctttaacgattccaaatttattaattattattt-aaaaagtcaactgttgcaattttcaatgcattgaata 31690451  T
Q  305 cataatttttcattaaaaacttattatttaaagtgttta 343  Q
    || || ||||||| | ||| ||| |||||||||||||||    
T  31690452 cacaacttttcataagaaatttactatttaaagtgttta 31690490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 53014317 - 53014208
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||| ||||| ||||| | |||||||||||||  ||||||||| |||||||||||||||| |||| ||||||||||| || |||| ||||||||| ||      
T  53014317 cactttttaaacatcctaaatttagtaattatctttttaaaaaattaactattacaatttccaatacattcaatacacaactttttattaaaaacatacc 53014218  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  53014217 atttaaagtg 53014208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 30538010 - 30538105
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| |||||||||||| |||||||| |||||||||||||||||||  |||||||||||||| |   ||||||  |||| |||||||||||||    
T  30538010 acattttgagcaataaattaacacaattttcaatacataatttctattaatggaattcttaacatgtattctaagggtacaaattaacatttccct 30538105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 32318606 - 32318512
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| | |||||||||| |||||||| |||||||||||||||||||  | |||||||||||| ||  |||||| |||||||||||||||||||    
T  32318606 acattttgaacaataaattaacacaattttcaatacataatttctattaatgaaattcttaacatgtg-gctaagggcacaagttaacatttccct 32318512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 207 - 306
Target Start/End: Original strand, 51736327 - 51736425
Alignment:
Q  207 cttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||||||| ||| |||||||||||  || ||| |||||| ||||||| ||||||||||| |||||||| |||||||||| |||| ||||||    
T  51736327 cttgttaacgagtgcccataa-acactctttaatgattccaaatttagcaattattcttttaaaaagtcaactattataattttcaatacattgaataca 51736425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 52 - 138
Target Start/End: Original strand, 14136653 - 14136739
Alignment:
Q  52 agcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||  | |||||||||||||| |||||||||||  ||||||||||||||| || ||||| ||||||||| ||||||||    
T  14136653 agcaataaattaatataatttccaatacatgatttctattagtagaattcttaacatataccttaagggcacaagttagcatttccc 14136739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 34391799 - 34391705
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||||||||||| ||||| ||||| |  ||||||||||| ||||||| |||||||| || |||| |||||||||||| ||||| |||||||||    
T  34391799 atttagtaattattcttttataaagtcagttattacaatttccaatgcaatcaatacacaactttttattaaaaacttactattttaagtgttta 34391705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 39195862 - 39195741
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||||||  ||| ||||||||||| |||  | |||||||| || || ||| |||| || |||||||||||||||||||||||| ||||    
T  39195862 gtcttgttaacgagtgccctcaaggcactctttaaggatcttaaatttagtatttttt-tttaaaaaggtcaactattacaattttcaatgcattgaata 39195764  T
Q  305 cataatttttcattaaaaactta 327  Q
    || || |||||||  ||||||||    
T  39195763 cacaacttttcatataaaactta 39195741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 53039468 - 53039557
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||| ||||||||||| |||||||  |||||||||||||||||||| | |||||||||||| | || ||||  ||||||||||||||||    
T  53039468 ttttatgcaataaattaacacaattatcaatacataatttctattagtgaaattcttaacatgtaccttaagagcacaagttaacatttc 53039557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 131
Target Start/End: Original strand, 20574954 - 20575030
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaac 131  Q
    ||||||||| |||||||||||||||| ||||  |||||  |||||||||||||| |||||||||||||||| |||||    
T  20574954 aataaattaacacaatttccaatacacaattattattaatggaattcttaacatgtgccctaaggacacaaattaac 20575030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 339
Target Start/End: Original strand, 37060522 - 37060653
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||||| |  ||||  ||||||||||||||| |||||||| || || ||  ||||| | |||||||| ||||||||||||| | ||||    
T  37060522 gtcttgttaacgagtgcctccgagac--tctttaagcatcccaaatttagta-ttctt-ttaaaaaaaatcaactattataattttcaatgcaattaata 37060617  T
Q  305 cataa-tttttcattaaaaacttattatttaaagtg 339  Q
    ||||| ||||||||||||||||||  ||||||||||    
T  37060618 cataattttttcattaaaaacttaccatttaaagtg 37060653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 24010282 - 24010336
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    |||||||||| |||||||| |||||||||||||||||||| ||||||||||||||    
T  24010282 caataaattaacacaattttcaatacataatttctattagtggaattcttaacat 24010336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 327
Target Start/End: Original strand, 42222969 - 42223047
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||| ||||  ||||||||   |||||||| |||||||||||||||||||||| ||||||| ||||||||||||    
T  42222969 atttagtaactatttatttaaaaaaccaactattataattttcaatgcattcaatacacaattttttattaaaaactta 42223047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 47 - 136
Target Start/End: Original strand, 41460624 - 41460712
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||||| ||||||||| ||||||||  |||||||| |||||||||  |||||||||||||| || ||||| | ||||||||||||||||    
T  41460624 ttttaagtaataaattaacacaatttttaatacata-tttctattactggaattcttaacatgtgtcctaaaggcacaagttaacatttc 41460712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 139
Target Start/End: Original strand, 17268862 - 17268954
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||| |||||||||| |||||| ||| | |||||||||||||||   ||||||||||||| |||||||| |   |||||||||||||||||    
T  17268862 ttttaaacaataaattaacacaatctccgagacataatttctattaatagaattcttaacatgtgccctaaaggttcaagttaacatttccct 17268954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 135
Target Start/End: Original strand, 32055091 - 32055179
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||  |||||  ||||||| |||  ||||| |||||||||||||||    
T  32055091 ttttaaacaataaattaacacaattttcgatacataatttctattaatggaatctttaacatgtgctttaagggcacaagttaacattt 32055179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 41069084 - 41069176
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    |||||||||||||||||| |||||||| ||| ||||||||||||||||   ||||||| ||||  | | ||||| |||| |||||||||||||    
T  41069084 attttaagcaataaattaacacaattttcaaaacataatttctattagtaaaattctttacatgggtcttaagggcacatgttaacatttccc 41069176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 13585370 - 13585263
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||| | | |||||| ||||||| |||| ||||    ||| ||||||||||||||| ||||| ||||||| |||||||  ||||||||    
T  13585370 gacactctttaagcattctaaatttagaaattattattttcaaaa----actgttacaattttcaatgtattcattacataacttttcatataaaactta 13585275  T
Q  328 ttatttaaagtg 339  Q
      ||||||||||    
T  13585274 ccatttaaagtg 13585263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 228 - 299
Target Start/End: Complemental strand, 12618807 - 12618736
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    |||||||||||||||| ||| |||||| ||||||| ||||||||||| || | ||| || ||||||||||||    
T  12618807 gacactctttaagcattccaaatttagaaattatttttttaaaaagtcaaatgttataaatttcaatgcatt 12618736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 33 - 108
Target Start/End: Original strand, 18995241 - 18995315
Alignment:
Q  33 gggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||||| || ||||||| |||||||| ||| |||||||| | ||||||||||||||||||  |||||||||||||    
T  18995241 gggagtattaaacattttgagcaataa-ttaacacaattttcgatacataatttctattagtagaattcttaacat 18995315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 336
Target Start/End: Original strand, 48337532 - 48337658
Alignment:
Q  211 ttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataat 310  Q
    ||||||||||  ||| ||| ||||||||| |||||   |||||  |||||||  |||||||| | |||||||||||||||||||||||| | |||  |||    
T  48337532 ttaacgagtgttcctgagatactctttaaacatccttaatttaacaattatttctttaaaaaatcaactattacaattttcaatgcattgattactcaat 48337631  T
Q  311 ttttcat-taaaaacttattatttaaa 336  Q
    |||| ||  ||||||||| ||||||||    
T  48337632 tttttataaaaaaacttactatttaaa 48337658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 294
Target Start/End: Complemental strand, 23606019 - 23605974
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaat 294  Q
    |||||||||||||| |||||||||||||| ||||||||||| ||||    
T  23606019 atttagtaattattcttttaaaaagttaattattacaatttccaat 23605974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 249 - 326
Target Start/End: Complemental strand, 37138254 - 37138177
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    |||||| || |||| ||||||||||| |||||||| ||||| ||||||| |||||||| || ||||||| || |||||    
T  37138254 atttagcaactattcttttaaaaagtcaactattataatttccaatgcactcaatacacaacttttcataaagaactt 37138177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 322
Target Start/End: Complemental strand, 41956565 - 41956449
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatac 305  Q
    |||| |||||||||||||| | |||||||||||||||  ||| | | || || |||| ||| | ||| |||| |||| |||||||||| ||||| | |||    
T  41956565 tcttattaacgagtgcccccaggacactctttaagcaatccaaaataagaaagtattctttaagaaatttaaatatttcaattttcaacgcattgattac 41956466  T
Q  306 ataatttttcattaaaa 322  Q
    | |||||||||| ||||    
T  41956465 acaatttttcataaaaa 41956449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 42899567 - 42899654
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    |||||||||||||||||||| ||||||||  |||||       |||| || | ||||||||| |||| ||||||| |||||||||||||||||||    
T  42899567 acattttaagcaataaattaacacaattttaaatac-------ctatcagtgaaattcttaatatataccctaagaacacaagttaacatttccc 42899654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 53039409 - 53039377
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacat 133  Q
    |||||||||||||||||||||||||||||||||    
T  53039409 cttaacatatgccctaaggacacaagttaacat 53039377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 273
Target Start/End: Original strand, 8260201 - 8260240
Alignment:
Q  234 ctttaagcatcccatatttagtaattattgttttaaaaag 273  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  8260201 ctttaagcatcccaaatttagtaattattcttttaaaaag 8260240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 234 - 273
Target Start/End: Original strand, 8273619 - 8273658
Alignment:
Q  234 ctttaagcatcccatatttagtaattattgttttaaaaag 273  Q
    |||||||||||||| |||||||||||||| ||||||||||    
T  8273619 ctttaagcatcccaaatttagtaattattcttttaaaaag 8273658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 286
Target Start/End: Complemental strand, 13800831 - 13800751
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaa 286  Q
    ||||||||||||||||||||| ||  ||||||||||| |||| | |||||| || |||| ||| ||||||| || ||||||||    
T  13800831 ggtcttgttaacgagtgcccccaa--cactctttaaggatcctaaatttagaaaatattctttaaaaaagtcaaatattacaa 13800751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 135
Target Start/End: Original strand, 20789218 - 20789325
Alignment:
Q  28 acggagggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagt 127  Q
    ||||||| |||| || ||||||| |||||||||||| |||||||| ||| | ||||||| |||||  | ||| ||||| ||||| | ||||  |||||||    
T  20789218 acggaggtagtattaaacattttgagcaataaattaacacaattttcaacaaataatttttattaatgtaatccttaagatatgtcataagagcacaagt 20789317  T
Q  128 taacattt 135  Q
    ||| ||||    
T  20789318 taatattt 20789325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 37383867 - 37383773
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||||||| | ||||||||||||||  |||||||| | |||  ||| || || |||||||||||||| | || |||| ||||||||    
T  37383867 gacactctttaagcatccaaaatttagtaattatt-ctttaaaaaatcaaccgttataacttccaatgcattcaatatacaactttttattaaaaa 37383773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 256 - 323
Target Start/End: Complemental strand, 43969269 - 43969203
Alignment:
Q  256 aattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    ||||||| ||||||||| | |||||||||||||||||||||| |||||| | ||||||| || |||||    
T  43969269 aattatttttttaaaaa-tcaactattacaattttcaatgcactcaatatacaattttttataaaaaa 43969203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 141
Target Start/End: Complemental strand, 46393158 - 46393119
Alignment:
Q  102 ttaacatatgccctaaggacacaagttaacatttccctaa 141  Q
    ||||| |||||| |||||||||||||||||||||||||||    
T  46393158 ttaacttatgccttaaggacacaagttaacatttccctaa 46393119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 208 - 271
Target Start/End: Original strand, 53261531 - 53261594
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaa 271  Q
    ||||||||||||||||| | |||||||||||||||| | | ||| |||||||||| ||| ||||    
T  53261531 ttgttaacgagtgcccccaggacactctttaagcatgctaaattaagtaattattctttaaaaa 53261594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 10305244 - 10305326
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||||| |||||||| |||||  ||||||||||||  | |||||| |||||||    |||||| ||||||||||||||||    
T  10305244 aataaattaacacaattttcaatatttaatttctattattgaaattctcaacatatattttaaggaaacaagttaacatttcc 10305326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 101 - 139
Target Start/End: Original strand, 25435753 - 25435791
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| |||||||||| |||||||||||||||||||    
T  25435753 cttaacatgtgccctaaggtcacaagttaacatttccct 25435791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 41370241 - 41370172
Alignment:
Q  268 aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagt 338  Q
    |||||||||| |||| |||||||||||||||| | |||| || |||||| |||||||||| |||| |||||    
T  41370241 aaaaagttaaatatttcaattttcaatgcattgattacacaaattttca-taaaaacttactattcaaagt 41370172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 140
Target Start/End: Original strand, 30255284 - 30255364
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    ||||||||| || ||||| |||| |||| |||||||||  |||||||||||||| |||     |||||||| ||||||||||||||    
T  30255284 aataaattaacataattttcaatgcatagtttctattaatggaattcttaacatgtgc-----ggacacaaattaacatttcccta 30255364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 54 - 139
Target Start/End: Complemental strand, 51675955 - 51675870
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||||| | |||||||| | ||||||| ||||||||   ||| ||||| ||||| | ||| | |||||||||||||||||||    
T  51675955 caataaattaacgcaatttccgagacataatatctattagtaaaatccttaaaatatgtcataaaggcacaagttaacatttccct 51675870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 140
Target Start/End: Original strand, 52279059 - 52279151
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    |||| |||||||||||| |||||||||  | |||||||||||||||| | |||  ||||| | ||||| |||| |||| |||||||||| ||||    
T  52279059 ttttgagcaataaattaacacaatttcttaaacataatttctattagtgaaatcattaacttgtgcccaaagg-cacacgttaacattttccta 52279151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 263 - 327
Target Start/End: Complemental strand, 14031417 - 14031353
Alignment:
Q  263 gttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||| |||||| ||| |||||||| |||||||||||||||| | || |||||||  ||||||||    
T  14031417 gtttttaaaagtcaacaattacaatattcaatgcattcaatatacaacttttcatataaaactta 14031353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 14958418 - 14958497
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||  |||||||| |||||||| ||| ||||||| | |||||||||||| || ||| | || ||||||||||||||    
T  14958418 aataaattcacacaattttcaatacatgattactattagtgaaattcttaacatttg-cctcaagatacaagttaacattt 14958497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 316
Target Start/End: Original strand, 24981761 - 24981873
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||| |||| ||||||| |||||  ||  || |||||| || |||| ||| ||||||||||   |||||| ||  |||||||| | |    
T  24981761 ggtcttgttaacgagtgtccctgagacactttttaaagatttcaaatttagaaaatattctttaaaaaagttaaacgttacaaattcaaatgcattgatt 24981860  T
Q  304 acataatttttca 316  Q
    ||| |||||||||    
T  24981861 acacaatttttca 24981873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 45850194 - 45850274
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||| || || || ||||||| |||| ||||||  |||| ||||||||| |||||||| ||||  |||||||||||    
T  45850194 aataaattaacataaatttcaatacacaattactattaatggaaatcttaacatgtgccctaatgacattagttaacattt 45850274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 84; Significance: 1e-39; HSPs: 61)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 27801363 - 27801228
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||||| | |||||||||||| ||| | | |||||||||||||| ||||||||||| |||||||||||||||||||||||||| |    
T  27801363 ggtcttgttaacgagtgcccccatgacactctttaatcattctaaatttagtaattattcttttaaaaagtcaactattacaattttcaatgcattcatt 27801264  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || |||| |||||||||||| |||||||||||    
T  27801263 acacaactttttattaaaaacttactatttaaagtg 27801228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 204 - 326
Target Start/End: Original strand, 28207593 - 28207715
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||  ||||||||||||||||||||| |||||  ||| ||| ||||||||||| |||||||||||||| |||||||||||||    
T  28207593 ggtcttgttaacgagtgcccccgagacactctttaagcatcccaaatttaacaataattcttttaaaaagtcaactattacaatttccaatgcattcaat 28207692  T
Q  304 acataatttttcattaaaaactt 326  Q
    ||| || ||||||||||||||||    
T  28207693 acacaacttttcattaaaaactt 28207715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 11257946 - 11257854
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||||||||||||||| ||||||||  ||||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||||||    
T  11257946 acattttaagcaataaattaacacaatttataatacataatttctattagtggaattcttaacatgtgccctaagggcacaagttaacatttc 11257854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 42636503 - 42636368
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||| |||||| ||   | |||||||||||||||||| |||||||||||||| ||  ||||||| |||||||||||||| ||||||||| |||    
T  42636503 ggtcttgttaaggagtgctcccggggcactctttaagcatcccaaatttagtaattattattcaaaaaagtcaactattacaatttacaatgcatttaat 42636404  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || |||||||||||||||||  ||||||||||    
T  42636403 acacaacttttcattaaaaacttaccatttaaagtg 42636368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 247 - 336
Target Start/End: Original strand, 35901943 - 35902032
Alignment:
Q  247 atatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    ||||||| |||||||| ||||||||||| || ||||||||||| |||||||||||||||| || ||||||||||||||||||||||||||    
T  35901943 atatttaataattatttttttaaaaagtcaattattacaatttccaatgcattcaatacagaacttttcattaaaaacttattatttaaa 35902032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 236 - 343
Target Start/End: Original strand, 1135162 - 1135269
Alignment:
Q  236 ttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaa 335  Q
    ||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||| |||||||| | || ||||| |||||||||||  ||||||    
T  1135162 ttaagcatctcgaatttagtaattattcttttaaaaagtcaactattacaattttcaatgtattcaatatacaacttttccttaaaaacttaccatttaa 1135261  T
Q  336 agtgttta 343  Q
    ||||||||    
T  1135262 agtgttta 1135269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 4384248 - 4384138
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||||| || | |||||||||||||| ||||||||| | |||||||||||||| |||||||||||||||| ||  |||||||||||| |||    
T  4384248 gacactctttaagcaccctaaatttagtaattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaa-ctttcattaaaaattta 4384150  T
Q  328 ttatttaaagtg 339  Q
    | ||||||||||    
T  4384149 tcatttaaagtg 4384138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 37456100 - 37456191
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||  |||||||||| ||||||||| |||||||    
T  37456100 attttgagtaataaattaacacaatttccaatacataatttctattagtggaattcttaacacgtgccctaagggcacaagttagcatttcc 37456191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 236 - 339
Target Start/End: Original strand, 3146037 - 3146144
Alignment:
Q  236 ttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg----cattcaatacataatttttcattaaaaacttattat 331  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||    |||||||| || |   |||||||||||||||| |||    
T  3146037 ttaagcatcccatatttagtaattattcttttaaaaagttaactattacaatttccaatgcattcattcaatgcacaccgtttcattaaaaacttactat 3146136  T
Q  332 ttaaagtg 339  Q
    ||||||||    
T  3146137 ttaaagtg 3146144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 2258202 - 2258093
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||||| ||||| |||||||| ||||||||||||||  ||||||||||| |||| ||| |||||| || |||||||| ||||||||      
T  2258202 cactctttaagcatcccaaatttaataattattcttttaaaaagttaatcattacaatttttaatgtatttaatacacaacttttcatttaaaacttacc 2258103  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  2258102 atttaaagtg 2258093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 204 - 301
Target Start/End: Complemental strand, 2888856 - 2888760
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattca 301  Q
    ||||| ||||||||||||||  ||| || |||| ||||||||||||||||||||||||| |||||||||||||||||||| ||||| |||||||||||    
T  2888856 ggtctcgttaacgagtgccctcaagtcattctt-aagcatcccatatttagtaattatttttttaaaaagttaactattataatttccaatgcattca 2888760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 44 - 129
Target Start/End: Original strand, 7107515 - 7107600
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagtta 129  Q
    ||||||| |||||||||||  ||||||||||||||||||||||||||||| |||||||||||||| |||| ||||| |||||||||    
T  7107515 acattttgagcaataaatttacacaatttccaatacataatttctattagtggaattcttaacatgtgccataagggcacaagtta 7107600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 228 - 349
Target Start/End: Complemental strand, 12829984 - 12829863
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||| ||||||||||  | ||||| |||||||| |||||||||||  | ||||||||||  |||||||||||||| ||||||||||||||||||||||    
T  12829984 gacactttttaagcatctaaaatttaataattattattttaaaaagtctattattacaattaacaatgcattcaatatataatttttcattaaaaactta 12829885  T
Q  328 ttatttaaagtgtttagaagtg 349  Q
      |||||||||| ||| |||||    
T  12829884 ccatttaaagtgcttaaaagtg 12829863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 235 - 339
Target Start/End: Complemental strand, 1369965 - 1369861
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattta 334  Q
    ||||||||||| | |||||| ||||||| ||||||||||| |||||| ||||||| |||||||||||||| |||| |||||||  ||||||||||| |||    
T  1369965 tttaagcatcctaaatttagcaattattcttttaaaaagtcaactatcacaatttccaatgcattcaatagataacttttcatataaaacttattaatta 1369866  T
Q  335 aagtg 339  Q
    |||||    
T  1369865 aagtg 1369861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 17867530 - 17867438
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| ||||||||| |||||||||| |||||||||||||||||  | |||||||||||| |||| ||||||||||| |||||||||||||    
T  17867530 ttttaagtaataaattaacacaatttccgatacataatttctattaatgaaattcttaacatgtgccttaaggacacaaattaacatttccct 17867438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 30069797 - 30069881
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||||||||||| |||| ||||| |||||||||||||||||||    
T  30069797 aataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccttaagggcacaagttaacatttccct 30069881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 204 - 302
Target Start/End: Complemental strand, 16723332 - 16723234
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaa 302  Q
    ||||||||||||||||| ||| | | |||||||||||||||||| |||| ||||||||| ||||||||| | ||||| ||||||||||||| |||||||    
T  16723332 ggtcttgttaacgagtgaccccagggcactctttaagcatcccaaattttgtaattattcttttaaaaaatcaactaatacaattttcaatacattcaa 16723234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 167978 - 167858
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    ||||||||| ||||||||||   ||||||||||||| ||| || |||||  ||||||| ||||||||||| |||||||| ||||| ||||||||| | ||    
T  167978 gtcttgttagcgagtgccccc--gacactctttaagtatctcaaatttaaaaattattcttttaaaaagtcaactattataatttccaatgcatttatta 167881  T
Q  305 cataatttttcattaaaaactta 327  Q
    ||||| |||||||| ||||||||    
T  167880 cataacttttcatttaaaactta 167858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 343
Target Start/End: Original strand, 24695740 - 24695854
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||| ||||   |||||||||||||| ||||||||||| ||||||||||||||  |||||| | |||||| || |||| ||| ||||||||    
T  24695740 gacactctttaagaatccagaatttagtaattattattttaaaaagtcaactattacaatttctaatgcagtgaatacacaactttttatt-aaaactta 24695838  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  24695839 ctatttaaagtgttta 24695854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 255 - 329
Target Start/End: Complemental strand, 3520894 - 3520820
Alignment:
Q  255 taattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||| ||||||||| | |||||||||| |||| |||||||||||||||||| |||||||||||||||||||    
T  3520894 taattattcttttaaaaaatcaactattacagtttttaatgcattcaatacataacttttcattaaaaacttatt 3520820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 12684606 - 12684496
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    ||||||||||||||| ||| ||||| |||||||| ||| ||| | | ||||||||||||||  |||||||||| |||| || |||| |||||||| ||||    
T  12684606 acactctttaagcattccaaatttaataattattctttcaaagaatcaactattacaatttctaatgcattcattacaaaacttttaattaaaaatttat 12684507  T
Q  329 tatttaaagtg 339  Q
    |||||||||||    
T  12684506 tatttaaagtg 12684496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 231 - 375
Target Start/End: Original strand, 33013041 - 33013187
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    ||||||||||||| ||| |||||  ||||||| ||||||||||| |||||||||||||| ||||| | |||||||| || ||||||| || |||||| ||    
T  33013041 actctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaatttccaatgtactcaatacacaacttttcataaagaacttacta 33013140  T
Q  331 tttaaagtgtttaga-agtgccc-gaaacactcgttaacatctctct 375  Q
     |||||||| ||| | ||||||| | | ||||||||||||| |||||    
T  33013141 attaaagtgcttaaagagtgcccaggagcactcgttaacatttctct 33013187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 33949661 - 33949548
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||||||   | ||||||||| |||||||||||||| | ||||||||||||||  |||||| |||||||| || ||||||| || |||||| |    
T  33949661 cactctttaagcatattaaatttagtaagtattgttttaaaaattcaactattacaatttcaaatgcactcaatacacaacttttcataaataacttact 33949562  T
Q  330 atttaaagtgttta 343  Q
    | ||||||||||||    
T  33949561 aattaaagtgttta 33949548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 46 - 136
Target Start/End: Complemental strand, 41128215 - 41128125
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||| |||||||||||| || ||||| ||||||||||||| |||||| ||||||||||| || |||||| ||| | ||||||||||||||    
T  41128215 attttgagcaataaattaacataattttcaatacataatttatattagtggaattcttaatatgtgcccttagggcgcaagttaacatttc 41128125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 1042790 - 1042855
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacata 109  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||||| | |||| ||||||||    
T  1042790 acattttaagcaataaattaacacaattttcaatacataatttctattagtgaaatttttaacata 1042855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 336
Target Start/End: Complemental strand, 37813514 - 37813410
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgtttt-aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    ||||||||||| |||||| |||||||||||||| |||| ||||||| ||| |||||||||| ||||||||| |||||| || |||||||   |||||||     
T  37813514 cactctttaaggatcccaaatttagtaattattcttttaaaaaagtcaaccattacaatttccaatgcattgaatacacaacttttcat---aaacttac 37813418  T
Q  329 tatttaaa 336  Q
    ||||||||    
T  37813417 tatttaaa 37813410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 226 - 338
Target Start/End: Original strand, 12954719 - 12954831
Alignment:
Q  226 aagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaact 325  Q
    |||| ||||| ||| |||| || |||||||||||||| |||| |||| | |||||||| ||||||||||  ||| |||||| ||||||||| |||||| |    
T  12954719 aagaaactctataaacatctcaaatttagtaattattttttttaaaaatcaactattataattttcaatagatttaatacacaatttttcaataaaaatt 12954818  T
Q  326 tattatttaaagt 338  Q
    ||| |||||||||    
T  12954819 tatcatttaaagt 12954831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 56 - 115
Target Start/End: Original strand, 8072535 - 8072594
Alignment:
Q  56 ataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccct 115  Q
    |||||||| |||||||| |||||||||||||||||||| |||||||||||||| ||||||    
T  8072535 ataaattaacacaattttcaatacataatttctattagtggaattcttaacatgtgccct 8072594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 208 - 323
Target Start/End: Complemental strand, 39691247 - 39691132
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacat 307  Q
    ||||||||||||||||   ||||||||||||||||| ||| ||| |  ||||||| ||| ||||||| || || | |||||||||||||||| ||||||     
T  39691247 ttgttaacgagtgccctcgagacactctttaagcattccacattaaaaaattattctttaaaaaagtcaaatagttcaattttcaatgcattgaatacac 39691148  T
Q  308 aatttttcattaaaaa 323  Q
    || ||||||| |||||    
T  39691147 aaattttcataaaaaa 39691132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 202 - 369
Target Start/End: Complemental strand, 9735441 - 9735274
Alignment:
Q  202 aaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattca 301  Q
    |||||||| ||||||| ||||||   ||| |||||||| ||| | | ||||| |||||||| ||| ||||||| ||||||||  | ||||||| |||| |    
T  9735441 aaggtcttattaacgaatgccccg--gacgctctttaaacattctaaatttaataattattttttaaaaaagtcaactattatgactttcaatacattta 9735344  T
Q  302 atacataatttttcattaaaaacttattatttaaagtgttt-agaagtg-cccgaaacactcgttaacat 369  Q
    ||||| || ||||||||||||| |||| ||||||| | ||| | ||||| | ||||||||||||||||||    
T  9735343 atacacaacttttcattaaaaatttatcatttaaaatatttaaaaagtgtctcgaaacactcgttaacat 9735274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 208 - 339
Target Start/End: Original strand, 884389 - 884520
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagtt-aactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||| | ||   ||||||||||| ||||  | |||||||||||||| || ||||||  | || ||||||||||||||||| ||| ||||||    
T  884389 ttgttaacgagtgtcactggaacactctttaaacatcataaatttagtaattattcttataaaaaaatcaattattacaattttcaatg-atttaataca 884487  T
Q  307 taatttttcattaaaaacttattatttaaagtg 339  Q
     |||||||||||||||||||   ||||||||||    
T  884488 caatttttcattaaaaactttcaatttaaagtg 884520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Original strand, 5588972 - 5589043
Alignment:
Q  247 atatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcatt 318  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||| | |||| || ||||||||    
T  5588972 atatctagtaattattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatt 5589043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 5896082 - 5896173
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| |||||||||||| |||||||| ||| | |||||||||||||  |||||| |||| || |||| ||||| | |||||||||||||    
T  5896082 acattttgagcaataaattaacacaattttcaacaaataatttctattaatggaatttttaatatgtgccttaagggcgcaagttaacattt 5896173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 81 - 148
Target Start/End: Complemental strand, 36068081 - 36068014
Alignment:
Q  81 taatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaaacaatat 148  Q
    |||||| |||||| | |||||||||||| || | ||||| ||||||||||||||||||||||||||||    
T  36068081 taatttttattagtgaaattcttaacatgtgtcataagggcacaagttaacatttccctaaacaatat 36068014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 231 - 338
Target Start/End: Complemental strand, 36356062 - 36355960
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    |||||||||| |||||| ||| |||||||||| |||||||||     ||||| ||||||  |||||||| |||||| || |||||||||||||||||  |    
T  36356062 actctttaagaatcccaaattaagtaattattcttttaaaaa-----ctattgcaatttctaatgcatttaatacacaacttttcattaaaaacttacca 36355968  T
Q  331 tttaaagt 338  Q
    ||||||||    
T  36355967 tttaaagt 36355960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 204 - 306
Target Start/End: Original strand, 9024457 - 9024559
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||| ||||||| |  | |||||||||||| |  ||| |||||||||||||| ||| ||||| | |||||||||||||||  ||||||| |||    
T  9024457 ggtcttgttaatgagtgcctccgaaacactctttaagaaaaccaaatttagtaattattctttcaaaaaatcaactattacaattttttatgcattaaat 9024556  T
Q  304 aca 306  Q
    |||    
T  9024557 aca 9024559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 13028103 - 13028200
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||||||| | | |||||||||||||| | | |||||  ||||||| ||||||||| |  | ||||||||||||||||||| ||||||||    
T  13028103 ttgttaacgagtgccccgagg-cactctttaagcattctaaatttatcaattattcttttaaaaaatctattattacaattttcaatgcactcaataca 13028200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 44 - 138
Target Start/End: Complemental strand, 31410959 - 31410866
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||| | |||||||||| |||||||||||||| |||||| ||||||   |||||||||| || || ||| ||| ||||||||||||||||||    
T  31410959 acattttgaacaataaattaacacaatttccaataaataattactattaatagaattcttaatatgtg-cctgagggcacaagttaacatttccc 31410866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 28 - 141
Target Start/End: Complemental strand, 2539941 - 2539829
Alignment:
Q  28 acggagggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagt 127  Q
    ||||| |||||| ||||  |||| ||||||||||||   |||||| | | ||||||||||||||| |  || ||||||||| |||| ||||| |||||||    
T  2539941 acggaaggagtattagattttttgagcaataaattaatgcaattttcgagacataatttctatta-ataaaatcttaacatgtgccataagggcacaagt 2539843  T
Q  128 taacatttccctaa 141  Q
    ||||||||||||||    
T  2539842 taacatttccctaa 2539829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 205 - 322
Target Start/End: Original strand, 25279899 - 25280015
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||||||||| |||||||||||||||| | | |||  | | |||||  |||||||||| || || | |||||| ||||| ||| ||||    
T  25279899 gtcttgttaacgagtgcccctacgacactctttaagcatgctaaattaggaagttatt-ctttaaaaagtcaaataattcaatttccaatgtattaaata 25279997  T
Q  305 cataatttttcattaaaa 322  Q
    ||||| ||||||| ||||    
T  25279998 cataagttttcataaaaa 25280015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 38869847 - 38869754
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    |||||||  ||||||||||| ||||||||  ||||||||||||||||||| || ||||||||||| |  ||| | |||| || |||||||||||    
T  38869847 acattttgtgcaataaattaacacaatttttaatacataatttctattagtggcattcttaacatgtctccttaagacataaattaacatttcc 38869754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 16037371 - 16037307
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||||| | ||||||||||  ||||||||| ||||||||||||||| || ||||||||||||||    
T  16037371 acattttgaccaataaattaatacaatttccgatacataatttctatcagtggaattcttaacat 16037307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 264 - 336
Target Start/End: Original strand, 33067531 - 33067603
Alignment:
Q  264 ttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    ||||||||||| || ||||||||| |  ||||||||||||||| || |||||||| |||||||| ||||||||    
T  33067531 ttttaaaaagtcaattattacaatgtctaatgcattcaatacaaaacttttcatttaaaacttactatttaaa 33067603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 252
Target Start/End: Original strand, 37426388 - 37426436
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatattt 252  Q
    ||||||||||||||||||||||  |||||||||||||||||||| ||||    
T  37426388 ggtcttgttaacgagtgcccctgggacactctttaagcatcccaaattt 37426436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 292 - 339
Target Start/End: Original strand, 26750607 - 26750654
Alignment:
Q  292 aatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||||||| |||||||||||||||||| |||| |||||||||||    
T  26750607 aatgcattcaatgcataatttttcattaaaatcttactatttaaagtg 26750654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 237 - 295
Target Start/End: Original strand, 2250356 - 2250414
Alignment:
Q  237 taagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatg 295  Q
    ||||||||||| ||||| |||||||| ||||||||||| ||| |||| |||||||||||    
T  2250356 taagcatcccaaatttaataattattcttttaaaaagtcaaccattataattttcaatg 2250414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 118
Target Start/End: Complemental strand, 6393631 - 6393557
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaag 118  Q
    ||||||| |||| ||||||| ||||||||   |||||||||||||||||   ||||||||||||| |||||||||    
T  6393631 acattttgagcagtaaattaacacaattttttatacataatttctattaacagaattcttaacatgtgccctaag 6393557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 67 - 139
Target Start/End: Complemental strand, 8771050 - 8770978
Alignment:
Q  67 caatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||| ||||| | ||||||||||||| || |||||| ||||| ||||||||| | |||||||| |||||||||    
T  8771050 caatatccaacatataatttctattaaagaaattctaaacatgtgccctaagaatacaagttagcatttccct 8770978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 54 - 130
Target Start/End: Complemental strand, 31451345 - 31451269
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaa 130  Q
    |||||||||| || ||||||||| |||||||||||||||  | ||| ||||| |||| |||| ||| ||||||||||    
T  31451345 caataaattaacaaaatttccaagacataatttctattaatgcaatccttaaaatatacccttagggcacaagttaa 31451269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 244 - 339
Target Start/End: Original strand, 37427197 - 37427295
Alignment:
Q  244 cccatatttagtaattattgttttaaaaag---ttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| |||||||||||||| |||||||||    | || ||||||||||||||||| | |||||||  || |||||||||||| ||||  ||||||||||    
T  37427197 cccaaatttagtaattattcttttaaaaaaaaatcaattattacaattttcaatgtaatcaatactcaacttttcattaaaatcttaccatttaaagtg 37427295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 37564468 - 37564356
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||||| ||  |||||||||||| ||| | | ||| || ||||||| ||| ||||||| || || | |||||| ||||| ||| ||||    
T  37564468 gtcttgttaacgagtgcctctgggacactctttaaacatgctaaattaagaaattattctttaaaaaagtcaaatagttcaatttccaatgtattaaata 37564369  T
Q  305 cataatttttcat 317  Q
    || || |||||||    
T  37564368 cacaagttttcat 37564356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 208 - 343
Target Start/End: Original strand, 45197347 - 45197485
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgtt---ttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||| |   ||||||||| |||| |||||  |||||||||||| | ||   ||||||||| ||| ||| |||||||||||| ||| | ||    
T  45197347 ttgttaacgagtgctctcgagacactctctaaggatccccaatttagtaattactattcctttaaaaagtcaacaattgcaattttcaatggattgatta 45197446  T
Q  305 cataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |  || ||||||| ||||| ||| ||||||| |||||||    
T  45197447 cccaacttttcataaaaaatttactatttaatgtgttta 45197485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 243
Target Start/End: Original strand, 40298850 - 40298889
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcat 243  Q
    ||||||||||||||||| ||||| ||||||||||||||||    
T  40298850 ggtcttgttaacgagtgtccctatgacactctttaagcat 40298889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 251 - 313
Target Start/End: Original strand, 2072381 - 2072443
Alignment:
Q  251 ttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttt 313  Q
    |||||||||||| ||||||||||| ||| ||||||| ||  ||| |||| |||||||||||||    
T  2072381 ttagtaattattcttttaaaaagtcaaccattacaacttctaatacatttaatacataatttt 2072443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 20279692 - 20279590
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| ||||||||   | |||||||||||||| | | | | || ||||||| ||| ||||||| || |||| ||||||||||| |||| |||    
T  20279692 ggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaaat 20279593  T
Q  304 aca 306  Q
    |||    
T  20279592 aca 20279590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 306
Target Start/End: Complemental strand, 21066319 - 21066217
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| ||||||||   | |||||||||||||| | | | | || ||||||| ||| ||||||| || |||| ||||||||||| |||| |||    
T  21066319 ggtcttgttaacaagtgcccccggggcactctttaagcattctaaaataagcaattattctttcaaaaagtcaaatatttcaattttcaatacattaaat 21066220  T
Q  304 aca 306  Q
    |||    
T  21066219 aca 21066217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 55 - 105
Target Start/End: Original strand, 26014940 - 26014990
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaa 105  Q
    ||||||||| ||||| ||||||||||||||||||||||  || ||||||||    
T  26014940 aataaattaacacaaattccaatacataatttctattaatggtattcttaa 26014990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 40651699 - 40651605
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattctt-aacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||| || ||||||| |  ||||||| ||||||||||||| ||| |  ||||||||| ||||| | |||||| | |||||||||||||||||    
T  40651699 acattttgagtaataaataattacaattttcaatacataatttttatcaatggaattctttaacatgtaccctaaaggcacaagttaacatttcc 40651605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 206 - 271
Target Start/End: Complemental strand, 1876617 - 1876552
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaa 271  Q
    |||||||||||||||||||   | |||||||||||||| | | ||| |||||||||| ||||||||    
T  1876617 tcttgttaacgagtgcccccggggcactctttaagcatgctaaattaagtaattattcttttaaaa 1876552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 237 - 290
Target Start/End: Original strand, 12544982 - 12545035
Alignment:
Q  237 taagcatcccatatttagtaattattgttttaaaaagttaactattacaatttt 290  Q
    ||||||||| | |||||||||||||| ||| ||||||| |||||||| ||||||    
T  12544982 taagcatcctaaatttagtaattattatttcaaaaagtcaactattataatttt 12545035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 230 - 306
Target Start/End: Complemental strand, 27734451 - 27734375
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||| |||||| |||||| |||||||  || |||||||  | |||||||| || ||||||||| ||||||    
T  27734451 cactctttaaggatcccaaatttagaaattattccttcaaaaagtctaatattacaaattccaatgcattgaataca 27734375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 80; Significance: 3e-37; HSPs: 64)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 44537310 - 44537445
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||| |||||||||||||||| |  ||||||||||||||||||||||||||||||||| ||||||||||| |||||||| ||||| || || ||  |||    
T  44537310 ggtctcgttaacgagtgcccctgatgcactctttaagcatcccatatttagtaattattcttttaaaaagtcaactattataatttccattgtatataat 44537409  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| ||||||||||||||||| |||||||||||    
T  44537410 acataacttttcattaaaaacttactatttaaagtg 44537445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 28663274 - 28663141
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||| | || |||||||||||||||  |  ||||| ||||||| ||||||||||| ||||||||||||||||||||||||||||    
T  28663274 ggtcttgttaacgagtgccc-tgaggcactctttaagcatcataactttag-aattattcttttaaaaagtcaactattacaattttcaatgcattcaat 28663177  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| ||||||||||||||| |||| |||||||||||    
T  28663176 acacaatttttcattaaaaccttactatttaaagtg 28663141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 28770446 - 28770581
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||| |   | |||||||||||||||||| | |||||||||||| |||| |||||| |||||||||||||| |||||||||||||    
T  28770446 ggtcttgttaacgagtgcctccggggcactctttaagcatcccaaaattagtaattattcttttgaaaagtcaactattacaatttccaatgcattcaat 28770545  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || ||||||||||||||||| |||||| ||||    
T  28770546 acacaacttttcattaaaaacttactatttagagtg 28770581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 35496684 - 35496571
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||| | ||||||||| |||  ||||||||||| |||||||||||||||||||||||||| |||| ||||||||||||||||||||      
T  35496684 cactctttaagcatccaaaatttagtaactatatttttaaaaagtcaactattacaattttcaatgcattcattacacaatttttcattaaaaacttacc 35496585  T
Q  330 atttaaagtgttta 343  Q
    ||||||||||||||    
T  35496584 atttaaagtgttta 35496571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 27123243 - 27123378
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   | |||||||||||||||||| |||||||||| ||| ||||||||||| |||||||||||||| ||||||||| | |    
T  27123243 ggtcttgttaacgagtgcccccggggcactctttaagcatcccaaatttagtaatcattcttttaaaaagtcaactattacaatttccaatgcattaagt 27123342  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| || ||||| |||||||||||  ||||||||||    
T  27123343 acacaacttttcgttaaaaacttaccatttaaagtg 27123378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 43234759 - 43234894
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| |    |||| ||||||||||||| |||||||||||||||| ||||||||| | |||||||||||||| || | ||||||||    
T  43234759 ggtcttgttaacgagtgctctcgggacattctttaagcatcctatatttagtaattattcttttaaaaaataaactattacaatttccattacattcaat 43234858  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| ||||||||||||| ||| |||||||||||    
T  43234859 acataacttttcattaaaaatttactatttaaagtg 43234894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 227 - 341
Target Start/End: Complemental strand, 37158470 - 37158356
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||| |||||| |||| | |||||||||||||| ||||||||||| |||||||||||||||||||||| | |||||||||||||| || ||||| ||    
T  37158470 agacactttttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaattttcaatgcagtgaatacataattttttataaaaaattt 37158371  T
Q  327 attatttaaagtgtt 341  Q
    |||||||||||||||    
T  37158370 attatttaaagtgtt 37158356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 66; E-Value: 6e-29
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 38073658 - 38073751
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||| |||||||||||| ||||||||| ||||||||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||||    
T  38073658 attttgagcaataaattaacacaatttctaatacataatttctattagagaaatgcttaacatgtgccctaagggcacaagttaacatttccct 38073751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 233 - 378
Target Start/End: Complemental strand, 21727514 - 21727366
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatt 332  Q
    |||||||||||| |  |||||||||||||| ||||||||||| |||||||||||||| |||| ||||||||||| || | || ||||||||||||| |||    
T  21727514 tctttaagcatctccaatttagtaattattcttttaaaaagtcaactattacaatttccaatacattcaatacacaaatatttattaaaaacttatcatt 21727415  T
Q  333 taaagtgtttaga-agtgcccgaaa--cactcgttaacatctctcttat 378  Q
    | ||||| ||| | ||||||| |||  ||||||||||||| || |||||    
T  21727414 tgaagtgcttaaagagtgccccaaaggcactcgttaacatttcccttat 21727366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 39321093 - 39320984
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||| ||| |||||  ||||||| ||||||||||| |||||||||||||||||||| |||||||||| || |||| || ||||||||| |    
T  39321093 cactctttaagcataccaaatttaacaattattcttttaaaaagtcaactattacaattttcaatgtattcaatacacaacttttaataaaaaacttact 39320994  T
Q  330 atttaaagtg 339  Q
    | ||||||||    
T  39320993 aattaaagtg 39320984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 135
Target Start/End: Complemental strand, 6647595 - 6647514
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||||| |||||||| | ||||||||||| |||||| | ||||||||||||||||| |||||||||||||||||||||    
T  6647595 caataaattaacacaattttctatacataatttttattagtgaaattcttaacatatgccataaggacacaagttaacattt 6647514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 54 - 135
Target Start/End: Original strand, 38652725 - 38652806
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||||| |||| |||||||||||||||||||||||| |||||||||||||| ||||||||   |||||||||||||||    
T  38652725 caataaattaacacactttccaatacataatttctattagtggaattcttaacatgtgccctaaaagcacaagttaacattt 38652806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 34 - 139
Target Start/End: Original strand, 41888867 - 41888972
Alignment:
Q  34 ggagtactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacat 133  Q
    |||||| || ||||||| | |||||||||| |||||||| |||| ||| ||||||||||  |||||||||| ||| |||||||||| |||||||||||||    
T  41888867 ggagtattaaacattttgaacaataaattaacacaattttcaatgcatgatttctattattggaattcttatcatgtgccctaagggcacaagttaacat 41888966  T
Q  134 ttccct 139  Q
    ||||||    
T  41888967 ttccct 41888972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 249 - 339
Target Start/End: Complemental strand, 32051424 - 32051336
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||||||||| |||| |||||| |||||| ||||||||||  |||||||||  |||||||||||||||||||||| |||||||||||    
T  32051424 atttagtaattatttttttgaaaagtcaactatgacaattttcatagcattcaat--ataatttttcattaaaaacttactatttaaagtg 32051336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 136
Target Start/End: Original strand, 39854184 - 39854265
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||||| |||||||| ||||||||||||| ||||||  ||||||||||||| |||||||||| ||||||||||||||||    
T  39854184 caataaattaacacaattttcaatacataatttatattagtagaattcttaacatgtgccctaagg-cacaagttaacatttc 39854265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 46 - 138
Target Start/End: Original strand, 40211818 - 40211910
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||| ||||||||||||  |||||||||||||||| |||| || |||  ||||| ||||||||||| ||||||| |||||||||||||||||    
T  40211818 attttgagcaataaattaagacaatttccaatacatgatttataatagtagaatttttaacatatgctctaaggatacaagttaacatttccc 40211910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 200 - 343
Target Start/End: Complemental strand, 40754087 - 40753945
Alignment:
Q  200 ttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    ||||||||||||||||||||||   |    |||||||||| ||||  | ||||| |||||||| ||| ||||| | |||||||||| |||||||| ||||    
T  40754087 ttaaggtcttgttaacgagtgctatttgaccactctttaaacatcataaatttaataattattttttaaaaaaatcaactattaca-ttttcaatacatt 40753989  T
Q  300 caatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
     |||||| || |||||||||||||||||| ||||||| ||||||    
T  40753988 taatacacaacttttcattaaaaacttatcatttaaaatgttta 40753945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 26239633 - 26239539
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||| ||||||| ||| |||||||||||  ||| | ||| ||||||||| |||| | |||||||||||||||||||| |||||||||||||||    
T  26239633 atttagcaattattctttcaaaaagttaacgtttatagtttccaatgcattgaatatacaatttttcattaaaaacttactatttaaagtgttta 26239539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 252 - 369
Target Start/End: Original strand, 42936024 - 42936140
Alignment:
Q  252 tagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgtttaga-agtgc 350  Q
    ||||||||||| ||||||||| | |||||||||||||| ||||||||| |||||| ||||||||||| |||||||  |||||||||||| || | | |||    
T  42936024 tagtaattattcttttaaaaaatcaactattacaattt-caatgcatttaatacacaatttttcatt-aaaacttgctatttaaagtgtataaagaatgc 42936121  T
Q  351 ccgaaacactcgttaacat 369  Q
    ||  |||||||||||||||    
T  42936122 cccgaacactcgttaacat 42936140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 136
Target Start/End: Original strand, 20884554 - 20884635
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||||||| |||||||||||||| | |||| ||||||| ||||||||||||||  ||||||||  ||||||||||||||||    
T  20884554 aataaattaacacaatttccaatatacaattactattagtggaattcttaacatgagccctaagcgcacaagttaacatttc 20884635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 204 - 336
Target Start/End: Original strand, 27870397 - 27870522
Alignment:
Q  204 ggtcttgttaacgagtgc-ccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaa 302  Q
    |||||||||||||||||| |||  || |||||||||| ||||| |||||||||||||||| |||||||| || |||||||||||||||||     |||||    
T  27870397 ggtcttgttaacgagtgctcccggag-cactctttaaacatcc-atatttagtaattattcttttaaaa-gtcaactattacaattttca-----ttcaa 27870488  T
Q  303 tacataatttttcattaaaaacttattatttaaa 336  Q
    || |||||||||||||||| ||||| ||| ||||    
T  27870489 taaataatttttcattaaatacttactatgtaaa 27870522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 35923595 - 35923505
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||||||| |||||| |||| |||| | |||||||||||||| |||||||||||    |||| |||||| ||||||||||||||||||||||||||    
T  35923595 atttagtcattattctttttaaaaataaactattacaatttccaatgcattca----ataacttttcaataaaaacttattatttaaagtgttta 35923505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 43224198 - 43224089
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||| | | ||||  |||||| ||||||||||| |||| ||||||||| ||||| ||  |||||| || ||||||||||||||||  |    
T  43224198 cactctttaagcatcctaaaattagatattattcttttaaaaagtcaactgttacaatttccaatgtatgtaatacacaacttttcattaaaaacttgct 43224099  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  43224098 atttaaagtg 43224089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 229 - 306
Target Start/End: Original strand, 44592860 - 44592937
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    |||||||||||  || | | ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  44592860 acactctttaaatattcaaaatttaataattattcttttaaaaagttaactattacaattttcaatgtattcaataca 44592937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 205 - 317
Target Start/End: Complemental strand, 10032057 - 10031945
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||| |||||||||||||||   |||||||||||||||| ||| | |||||||||||| |||||||||||||| | || | |||| ||||||||| | ||    
T  10032057 gtctcgttaacgagtgcccccgggacactctttaagcattccaaaattagtaattatttttttaaaaagttaaatgtttcgatttccaatgcattgatta 10031958  T
Q  305 cataatttttcat 317  Q
    || | ||||||||    
T  10031957 cacactttttcat 10031945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 44 - 139
Target Start/End: Complemental strand, 37391127 - 37391032
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| |||||||||||| ||||||||| |||| |||||  ||||||   ||||||||||||| |||| ||||| ||||||||||| |||||||    
T  37391127 acattttgagcaataaattaacacaatttctaataaataataactattaatagaattcttaacatgtgccttaagggcacaagttaacttttccct 37391032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 323
Target Start/End: Original strand, 3692891 - 3692965
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||| ||||||| ||||||||| | |||||||||||||| ||||||| |||||||| |||||||||| |||||    
T  3692891 atttagcaattattcttttaaaaaatcaactattacaatttccaatgcactcaatacacaatttttcataaaaaa 3692965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 339
Target Start/End: Original strand, 7653590 - 7653680
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| || |||| ||||||||||| |||||||| ||||| |||| |||||| |||| || ||||||||||||||||| | |||||||||    
T  7653590 atttagcaactattcttttaaaaagtcaactattataatttccaattcattcattacacaacttttcattaaaaacttactttttaaagtg 7653680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 25886184 - 25886278
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||| ||||||| | ||| ||||| ||||||||||||||||||| |||| |||||| || |||||||  ||||||||  ||||||||||||||    
T  25886184 atttagaaattattctcttagaaagtcaactattacaattttcaatacatttaatacacaacttttcatataaaacttaccatttaaagtgttta 25886278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 339
Target Start/End: Original strand, 35731282 - 35731391
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||| ||| |||||  || |||| ||||||||||| |||||||||||||| ||||||| | |||||| || |||| || || |||||| |    
T  35731282 cactctttaagcataccaaatttaacaactattcttttaaaaagtcaactattacaatttccaatgcacttaatacacaactttttataaagaacttact 35731381  T
Q  330 atttaaagtg 339  Q
    | ||||||||    
T  35731382 aattaaagtg 35731391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 229 - 336
Target Start/End: Complemental strand, 32699863 - 32699758
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    ||||||||||| ||||||| |||||  ||||||| ||||||||| | ||||||||||||||||| | || | |||| ||| ||||||| |||||||||||    
T  32699863 acactctttaatcatcccaaatttaaaaattatt-ttttaaaaaatcaactattacaattttcagtacaataaatatatattttttca-taaaaacttat 32699766  T
Q  329 tatttaaa 336  Q
     |||||||    
T  32699765 catttaaa 32699758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 288 - 339
Target Start/End: Complemental strand, 48488231 - 48488180
Alignment:
Q  288 tttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||||||| ||||||||| |||||||||||||||||| ||||||||||    
T  48488231 tttcaatgcattgaatacataacttttcattaaaaacttatcatttaaagtg 48488180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 9719103 - 9718996
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||| | | |||||| ||||||| |||| ||||    ||| ||||||||||||||| ||||| ||||||| |||||||  ||||||||    
T  9719103 gacactctttaagcattctaaatttagaaattattattttcaaaa----actgttacaattttcaatgtattcattacataacttttcatataaaactta 9719008  T
Q  328 ttatttaaagtg 339  Q
      ||||||||||    
T  9719007 ccatttaaagtg 9718996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 46 - 135
Target Start/End: Original strand, 46718519 - 46718608
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| |||||||||| || | ||||||||| ||||||| |||||  | |||||||||||| || | ||||||||| |||||||||||    
T  46718519 attttaaacaataaattaacatattttccaataaataatttttattaatgaaattcttaacatctgtcttaaggacacgagttaacattt 46718608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 137
Target Start/End: Complemental strand, 11666755 - 11666699
Alignment:
Q  81 taatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||||||||| |||||||||||||| |||| ||||  |||||||||||||||||    
T  11666755 taatttctattagtggaattcttaacatgtgccataagtgcacaagttaacatttcc 11666699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 21148481 - 21148417
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||||| || |||||||||  ||||||| ||||||||||||| |||||| ||||||||||||||    
T  21148481 acattttgagtaataaattaatacaattttcaatacataatttttattagtggaattcttaacat 21148417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 45278787 - 45278695
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||| |||||||||||| | ||||||   | |||||||||||||||| ||||| ||||| || | |||||||| |||||||||| ||||||||    
T  45278787 ttttgagcaataaattaacgcaatttttgaaacataatttctattagtggaatccttaagatgtaccctaaggtcacaagttaatatttccct 45278695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 66 - 129
Target Start/End: Original strand, 17874712 - 17874775
Alignment:
Q  66 acaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagtta 129  Q
    ||||||| ||||||||||||| |||||| ||||||||||| || ||||||||||  ||||||||    
T  17874712 acaattttcaatacataatttatattagtggaattcttaatatgtgccctaagggtacaagtta 17874775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 268 - 323
Target Start/End: Original strand, 33123800 - 33123855
Alignment:
Q  268 aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||| |||||||||||| |||||| ||||||| | |||||||||||||    
T  33123800 aaaaagttaacttttacaattttcattgcattgaatacatgaattttcattaaaaa 33123855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 208 - 314
Target Start/End: Original strand, 2347390 - 2347496
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacat 307  Q
    ||||||||||||||||||| || |||||| ||| || ||| ||||||||| ||||  |  ||||| | || |||||||| |||||||||||| | |||||    
T  2347390 ttgttaacgagtgcccctaggatactcttaaaggattccaaatttagtaaatattcctcaaaaaaatcaaatattacaaatttcaatgcattgattacat 2347489  T
Q  308 aattttt 314  Q
    || ||||    
T  2347490 aaatttt 2347496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 29711585 - 29711491
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||| |||| || ||||||||| | ||| |||| ||||||||||| ||||| |||||||||||| ||  |||| |||| |||| |||||||||    
T  29711585 atttagaaatttttcttttaaaaaatcaacaattataattttcaatgtattcattacataattttttatataaaatttatcattttaagtgttta 29711491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 227 - 313
Target Start/End: Complemental strand, 33887966 - 33887880
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttt 313  Q
    ||||||||||||||||| ||| | | | |||||||| ||| ||||||| || |||| |||||||||||||||| | ||||| |||||    
T  33887966 agacactctttaagcattccaaaataaataattattctttaaaaaagtcaaatatttcaattttcaatgcattgattacattatttt 33887880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 38 - 108
Target Start/End: Complemental strand, 33955987 - 33955917
Alignment:
Q  38 tactagacattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||| ||| ||||| |||||||||| |||||||| ||||| ||||||| ||||||  |||||||||||||    
T  33955987 tactaaacaatttaaacaataaattaacacaattttcaatatataatttttattagtagaattcttaacat 33955917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 229 - 290
Target Start/End: Original strand, 3719199 - 3719260
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaatttt 290  Q
    ||||| |||||| |||  |||||||  ||||||||||||||||||| |||||||||||||||    
T  3719199 acactatttaaggatcgtatatttataaattattgttttaaaaagtcaactattacaatttt 3719260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 57 - 106
Target Start/End: Complemental strand, 6727205 - 6727156
Alignment:
Q  57 taaattaccacaatttccaatacataatttctattagaggaattcttaac 106  Q
    ||||||| |||||||| ||||||||||||| |||||| ||||||||||||    
T  6727205 taaattaacacaattttcaatacataatttttattagtggaattcttaac 6727156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 11667079 - 11667042
Alignment:
Q  52 agcaataaattaccacaatttccaatacataatttcta 89  Q
    |||||||||||| |||||||||||||||||||||||||    
T  11667079 agcaataaattaacacaatttccaatacataatttcta 11667042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 54 - 139
Target Start/End: Original strand, 14761837 - 14761922
Alignment:
Q  54 caataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| | ||||| || ||||||| ||||||||||||  |||||||||| || ||| |||| | ||||||||| |||||||||    
T  14761837 caataaataaacacaaatttcaatacaaaatttctattagtagaattcttaatatgtgcactaatggcacaagttatcatttccct 14761922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 343
Target Start/End: Complemental strand, 2959656 - 2959573
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||| ||| |||||||||| | ||| || ||| |||||||| | |||||||||||||| |||||| |||||||| ||||||||||    
T  2959656 tattttttgaaaaagttaaatgttataaattttaatgcattgattacataatttttca-taaaaatttattattaaaagtgttta 2959573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 80 - 136
Target Start/End: Original strand, 8073654 - 8073710
Alignment:
Q  80 ataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    |||||||||||||| | |||||||||||| | ||||||| |||||||||| ||||||    
T  8073654 ataatttctattagtgaaattcttaacatgtaccctaagaacacaagttagcatttc 8073710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 299
Target Start/End: Original strand, 1360529 - 1360600
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    |||||||||||||||| ||| | |||||||||||| ||| |||||||||| | || | |||| |||||||||    
T  1360529 gacactctttaagcattccaaaattagtaattattttttaaaaaagttaaatgtttcgatttccaatgcatt 1360600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 207 - 322
Target Start/End: Original strand, 46726109 - 46726223
Alignment:
Q  207 cttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||||||||   | ||||||||||| || ||| |||||  || |||| ||| ||||||| || | |||||| |||||||||||| | ||||    
T  46726109 cttgttaacgagtgcccccggg-cactctttaaggataccaaatttaaaaaatattctttaaaaaagtcaaatgttacaaatttcaatgcattgattaca 46726207  T
Q  307 taatttttcattaaaa 322  Q
    || |||||||| ||||    
T  46726208 tagtttttcataaaaa 46726223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 270
Target Start/End: Original strand, 5907794 - 5907859
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaa 270  Q
    |||||||||||||||||||| || | |||||||||||||| | | ||| |||||||||| |||||||    
T  5907794 ggtcttgttaacgagtgccc-tagggcactctttaagcattctaaattaagtaattatttttttaaa 5907859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 233 - 299
Target Start/End: Complemental strand, 22618805 - 22618739
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    |||||||| |||||| |||||  |||||||  || |||| || ||||||||||||||||||||||||    
T  22618805 tctttaaggatcccaaatttaaaaattatttcttcaaaatgtcaactattacaattttcaatgcatt 22618739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 204 - 322
Target Start/End: Complemental strand, 35599939 - 35599821
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||| |  ||| ||||||||| ||| | | |||  | ||||||| ||| ||||| | || || | ||| |||||||||||| |||    
T  35599939 ggtcttgttaacgagtgcctccgagatactctttaaacatactaaattaggaaattattctttaaaaaattcaaatagttcaaatttcaatgcattgaat 35599840  T
Q  304 acataatttttcattaaaa 322  Q
    |||||| ||||||| ||||    
T  35599839 acataacttttcataaaaa 35599821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 259 - 329
Target Start/End: Complemental strand, 47778636 - 47778567
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||| ||||||||||| |||||||||||||| ||||| | | |||||| ||||||| | ||||||||||||    
T  47778636 tattattttaaaaagtcaactattacaatttccaatgtagtgaatacacaatttttta-taaaaacttatt 47778567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 336
Target Start/End: Complemental strand, 34117953 - 34117876
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaa 336  Q
    |||| ||||| ||||| ||||||||| |||| |||||| || | || | ||||||| ||||||||||||| |||||||    
T  34117953 tattattttagaaagtcaactattacgatttccaatgcgttaattatacaattttttattaaaaacttatcatttaaa 34117876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 10200593 - 10200672
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| ||||||||||| |||  |||||||||  |||||||| |||||||||  ||||  ||||||||||| ||||||||||    
T  10200593 tattcttttaaaaagtcaaccgttacaatttcaaatgcattaaatacataa-ctttctataaaaacttatcatttaaagtg 10200672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 204 - 240
Target Start/End: Complemental strand, 15034935 - 15034899
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaag 240  Q
    |||||||||||||||||||| || |||||||||||||    
T  15034935 ggtcttgttaacgagtgcccttaggacactctttaag 15034899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 249 - 317
Target Start/End: Original strand, 18801054 - 18801122
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcat 317  Q
    |||||| ||||| | |||| |||||| ||||||||||||||||||| || | |||||| || |||||||    
T  18801054 atttagcaattactcttttcaaaagtcaactattacaattttcaatacaatgaatacacaacttttcat 18801122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 21388108 - 21388192
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||| || |||||||| | | |||||||||||| ||  ||||| ||||| || || | ||||| |||||||||||||||||||    
T  21388108 aataaagtaacacaattttcgagacataatttctactaatggaatccttaagatgtgtcataagggcacaagttaacatttccct 21388192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 135
Target Start/End: Complemental strand, 31418133 - 31418045
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||| |||||||||| | ||||||   | |||||||||||||||  |||||  ||||||| || | ||||| |||||||||||||||    
T  31418133 ttttaaacaataaattaacgcaatttttgagacataatttctattaatggaatcattaacatgtgtcttaagggcacaagttaacattt 31418045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 38318988 - 38318948
Alignment:
Q  99 ttcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| | |||| |||||||||||||||||||||||||    
T  38318988 ttcttaacttgtgccttaaggacacaagttaacatttccct 38318948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 133
Target Start/End: Complemental strand, 39854116 - 39854084
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacat 133  Q
    ||||||||||||||||||| |||||||||||||    
T  39854116 cttaacatatgccctaagggcacaagttaacat 39854084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 47 - 91
Target Start/End: Original strand, 44600241 - 44600285
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctatt 91  Q
    ||||||| ||||||||| |||||||||||||||| ||||| ||||    
T  44600241 ttttaagaaataaattaacacaatttccaatacaaaatttttatt 44600285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 51)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 4762318 - 4762453
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| ||     |||| ||||||||||||| |||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||    
T  4762318 ggtcttgttaacgagtgctcccggatcactgtttaagcatcccaaatttagtaattattattttataaagtcaactattataattttcaatgcattcaat 4762417  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| ||||||| |||||||| ||| |||||||||||    
T  4762418 acacaattttttattaaaaatttactatttaaagtg 4762453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 230 - 339
Target Start/End: Complemental strand, 1334995 - 1334886
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||||| ||||| |||||||| ||| ||||| | |||||||||||||| |||||||||||||| | |||||||||||||||||||||     
T  1334995 cactctttaagcatcccaaatttaataattattctttaaaaaaatcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttatc 1334896  T
Q  330 atttaaagtg 339  Q
    ||||||||||    
T  1334895 atttaaagtg 1334886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 235 - 339
Target Start/End: Complemental strand, 19890295 - 19890191
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattta 334  Q
    ||||||||||| | |||||||||||||| ||||||||||| |||||||||||||| ||||||||| |||||| || |||||||||||||||||||||||     
T  19890295 tttaagcatcctaaatttagtaattattcttttaaaaagtcaactattacaatttccaatgcatttaatacacaacttttcattaaaaacttattatttt 19890196  T
Q  335 aagtg 339  Q
    |||||    
T  19890195 aagtg 19890191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 20064880 - 20065014
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||||| ||| | ||||||||||| |||| | || ||||||||||| ||||||||||| |||||||||||||||||||| ||| |||    
T  20064880 ggtcttgttaacgagtgcctctagggcactctttaaggatcctaaatatagtaattattcttttaaaaagtcaactattacaattttcaatgtattaaat 20064979  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| ||||||||| ||||| |||  |||||||||||    
T  20064980 acacaatttttca-taaaacctttctatttaaagtg 20065014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 32227526 - 32227430
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    ||||||||| |||||||| | |||||||| ||||||||||||||||||||  |||||||||||||||||||||||| |||| |||||||||||||||    
T  32227526 acattttaaacaataaatgaacacaattttcaatacataatttctattagtagaattcttaacatatgccctaagggcacatgttaacatttcccta 32227430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 34904925 - 34904790
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| |    | ||||||||||| ||| ||||||||||||||||| ||||||||| | ||||||||||||||| |||| ||| |||    
T  34904925 ggtcttgttaacgagtgctctctgggcactctttaagtatctcatatttagtaattattcttttaaaaaatcaactattacaatttttaatgaatttaat 34904826  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    ||| ||||||||||||| ||||||  ||||||||||    
T  34904825 acaaaatttttcattaataacttacaatttaaagtg 34904790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 233 - 339
Target Start/End: Complemental strand, 31452454 - 31452349
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatt 332  Q
    ||||||| |||||||  ||||||||||||| ||||||||||| ||| ||||||||||||||||||||||||||| || |||| |||||||||||| ||||    
T  31452454 tctttaaacatcccaagtttagtaattattcttttaaaaagtcaacaattacaattttcaatgcattcaatacacaactttt-attaaaaacttactatt 31452356  T
Q  333 taaagtg 339  Q
    |||||||    
T  31452355 taaagtg 31452349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 9449064 - 9448952
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||||| | || |||||||||||||| ||||||||| | |||||||| |||||||||| ||||||||||| || |||||||||||||||||      
T  9449064 cactctttaagcaactcaaatttagtaattattcttttaaaaa-tcaactattataattttcaatacattcaatacacaacttttcattaaaaacttacc 9448966  T
Q  330 atttaaagtgttta 343  Q
    ||||||||||||||    
T  9448965 atttaaagtgttta 9448952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 208 - 306
Target Start/End: Original strand, 14295602 - 14295699
Alignment:
Q  208 ttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    ||||||||||||| ||| | |||| |||||||| |||||| |||||||||||||| |||||||| ||||||||||||||||||||||||||| ||||||    
T  14295602 ttgttaacgagtgtccc-atgacattctttaagaatcccaaatttagtaattattcttttaaaaggttaactattacaattttcaatgcattgaataca 14295699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 201 - 342
Target Start/End: Original strand, 15505510 - 15505651
Alignment:
Q  201 taaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattc 300  Q
    |||||||| ||||||||||| |   || |||||||||||| ||  || ||||| |||||||| ||| ||||||| |||||||| |||||||||| |||||    
T  15505510 taaggtctcgttaacgagtgtcttcaacacactctttaagtatttcaaatttaataattattctttcaaaaagtaaactattataattttcaatacattc 15505609  T
Q  301 aatacataatttttcattaaaaacttattatttaaagtgttt 342  Q
    |||||| || ||||||||  ||||||| ||||||||||||||    
T  15505610 aatacacaacttttcattccaaacttactatttaaagtgttt 15505651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 46 - 142
Target Start/End: Complemental strand, 32656333 - 32656237
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaaa 142  Q
    ||||||| |||||||||| ||||| || |||||||| ||||||||||| | |||||||||||| |||||||||| |||||||||||||||| |||||    
T  32656333 attttaatcaataaattaacacaagtttcaatacatgatttctattagtgaaattcttaacatgtgccctaagggcacaagttaacatttctctaaa 32656237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 12497362 - 12497271
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||||||||||||||| |||||||||| | |||| ||||||||||| |||||||||||||| || ||||||| ||||| |||||||||    
T  12497362 acattttaagcaataaattaacacaatttccgacacatgatttctattagcggaattcttaacatgtgtcctaagggcacaaattaacattt 12497271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 38534004 - 38533877
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||| |  ||||| ||||||||||| || |||||||||||||| ||||||| ||| |||||||  |||||  ||||||||||||    
T  38534004 ggtcttgttaacgagtgccc-tcggacaccctttaagcatctcaaatttagtaattatt-ttttaaatagtcaactattgtaatttctaatgcattcaat 38533907  T
Q  304 acataatttttcattaaaaacttattattt 333  Q
    ||| |||||||| ||| ||||||| |||||    
T  38533906 acacaatttttctttacaaacttactattt 38533877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 231 - 339
Target Start/End: Complemental strand, 31017418 - 31017310
Alignment:
Q  231 actctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatta 330  Q
    |||||| ||| |||||| |||||||||||||| ||| ||||||| || ||||  ||||||||||||||| |||||| || |||||||||||||||| | |    
T  31017418 actcttcaagtatcccaaatttagtaattattctttaaaaaagtcaaatattttaattttcaatgcatttaatacacaacttttcattaaaaacttttca 31017319  T
Q  331 tttaaagtg 339  Q
    |||||||||    
T  31017318 tttaaagtg 31017310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 44 - 135
Target Start/End: Original strand, 33830304 - 33830395
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| |||||||||||| |||||||||||||||||||||||||||||   |||||||||||||| |  ||||| || ||||||||||||    
T  33830304 acattttgagcaataaattaacacaatttccaatacataatttctattagtaaaattcttaacatatactataagggcataagttaacattt 33830395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 343
Target Start/End: Original strand, 37993071 - 37993186
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||| ||||||| ||| | | ||||| ||| |||| ||| ||||| | |||||||||||||||||||||||| |||||||||||||| |||||||| |||    
T  37993071 gacattctttaaacattctaaatttaataactattctttcaaaaaatcaactattacaattttcaatgcatttaatacataattttttattaaaaattta 37993170  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||| ||||||    
T  37993171 ctatttaaaatgttta 37993186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 327
Target Start/End: Complemental strand, 11945009 - 11944888
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    ||||||||||||||||  ||  |||||||||||||| |||| |  ||||||||||||| ||  |||| || |||||||||||||||||||||||| ||||    
T  11945009 gtcttgttaacgagtgttccagagacactctttaaggatcctaattttagtaattatttttaaaaaatgtcaactattacaattttcaatgcattgaata 11944910  T
Q  305 cataatttttcattaaaaactta 327  Q
    || || |||||| ||||||||||    
T  11944909 cacaacttttca-taaaaactta 11944888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 253 - 339
Target Start/End: Complemental strand, 29239336 - 29239251
Alignment:
Q  253 agtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||||| ||||||||||| |||||||||||||||||||||||||||||||  ||||||||||||| | ||| || ||||||||    
T  29239336 agtaattatt-ttttaaaaagtcaactattacaattttcaatgcattcaatacaccatttttcattaaagatttactaattaaagtg 29239251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 6590638 - 6590729
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    |||| |||||||||||| |||||||||  | |||||||||||||||| ||||| |||||||| || | ||||| ||||||||||||||||||    
T  6590638 tttttagcaataaattaacacaatttctgaaacataatttctattagtggaatccttaacatgtgtcataagggcacaagttaacatttccc 6590729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 30326116 - 30326211
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| || ||||||||| |||||||| ||||||||||||||| |||  | |||||||||||||| | ||| ||||||| ||||||||||||||    
T  30326116 acattttgagtaataaattaacacaattttcaatacataatttctcttaatgaaattcttaacatatacgctacggacacaggttaacatttccct 30326211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 138
Target Start/End: Complemental strand, 45075741 - 45075650
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||||||| |||||||| ||||||||||||| |||||| | |||| ||||||| |  ||||| ||||||| ||||||||||||    
T  45075741 ttttaagcaataaattaacacaattttcaatacataatttatattagtgaaatttttaacatgtatcctaaagacacaaattaacatttccc 45075650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 72 - 138
Target Start/End: Complemental strand, 43305525 - 43305459
Alignment:
Q  72 tccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||||||||||||  ||||| ||||||| |||||||||||||||||||| ||||||||    
T  43305525 tccaatacataatttctattagtagaattattaacatgtgccctaaggacacaagttatcatttccc 43305459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 249 - 343
Target Start/End: Complemental strand, 9173799 - 9173704
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattc-aatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    |||||| ||||||| ||||||||| | ||||||||||||||||||| || || |||||| |||||||||| ||||||||  || ||||||||||||    
T  9173799 atttagcaattatttttttaaaaaatcaactattacaattttcaatacaatcaaatacacaatttttcataaaaaacttgctaattaaagtgttta 9173704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 1299078 - 1298981
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgtttt--aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||||   ||||||||||||| ||| ||||  ||||||| |||||| |||||||||| || ||| ||||||||| |||||||||||||    
T  1299078 gacactctttaagcacttcatatttagtaataattattttttaaaaagtcaactatcacaattttcactgtatttaatacataacttttcattaaaaa 1298981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 339
Target Start/End: Original strand, 5524459 - 5524565
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatt 332  Q
    ||||||||||||| | || ||||||||||| |||| ||||||||| |||||||| ||| |||||||||||| || || |||| ||| || | ||| ||||    
T  5524459 tctttaagcatcctaaatatagtaattatttttttgaaaagttaattattacaacttttaatgcattcaatgcacaactttttatttaagatttactatt 5524558  T
Q  333 taaagtg 339  Q
    |||||||    
T  5524559 taaagtg 5524565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 44 - 134
Target Start/End: Complemental strand, 35310285 - 35310195
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatt 134  Q
    ||||||| | |||||||||| || |||||||||| ||||||||  ||||  |||||||||| ||| |||||||||| ||||||||||||||    
T  35310285 acattttgaacaataaattaacataatttccaatgcataattttcattattggaattcttatcatgtgccctaagggcacaagttaacatt 35310195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 204 - 333
Target Start/End: Complemental strand, 38533481 - 38533354
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||| |   |||||||||||||||| || ||||| ||||| || ||||||| ||| |||||||  |||||  ||||||||||||    
T  38533481 ggtcttgttaacgagtgccc-tcgtacactctttaagcatctcaaatttaataatt-ttattttaaatagtcaactattgtaatttctaatgcattcaat 38533384  T
Q  304 acataatttttcattaaaaacttattattt 333  Q
    ||| |||||||| ||| ||| ||| |||||    
T  38533383 acacaatttttctttacaaaattactattt 38533354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 205 - 337
Target Start/End: Original strand, 40789678 - 40789810
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagtt-aactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||| |||||||  ||||||| ||||| ||| |||||  ||||||| ||||||||   | || ||||| |||||||||| || |||||    
T  40789678 gtcttgttaacgagtgtccctaagt-actctttgagcataccaaatttaacaattattcttttaaaattatcaattattataattttcaatacactcaat 40789776  T
Q  304 acataatttttcattaaaaacttattatttaaag 337  Q
    | |||||||||||| || ||||||||| ||||||    
T  40789777 agataatttttcataaagaacttattaattaaag 40789810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 227 - 339
Target Start/End: Original strand, 41933123 - 41933235
Alignment:
Q  227 agacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||| ||||| |||  || |||||| ||||||| ||||||||||| |||||||||||||||||||||| ||| || | || |||| || ||||| ||    
T  41933123 agacactgtttaaacatatcaaatttagcaattattcttttaaaaagtcaactattacaattttcaatgcactcagtaaacaactttttataaaaaattt 41933222  T
Q  327 attatttaaagtg 339  Q
    | || ||||||||    
T  41933223 actaattaaagtg 41933235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 228 - 335
Target Start/End: Original strand, 7673187 - 7673294
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||  |||| | |||||| ||||||| | || |||||| ||||||||||||||||||| |||| | |||| || |||| ||  ||||||||    
T  7673187 gacactctttaactatcctaaatttagcaattattctctttaaaagtcaactattacaattttcaatacatttagtacacaactttttatataaaactta 7673286  T
Q  328 ttatttaa 335  Q
    ||||||||    
T  7673287 ttatttaa 7673294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 44 - 136
Target Start/End: Complemental strand, 9374119 - 9374027
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttc 136  Q
    ||||||| ||||||||||||  ||||||||||||||||||||||| |||  | |||| ||||||| ||| |||| | || ||||||| |||||    
T  9374119 acattttgagcaataaattaaaacaatttccaatacataatttctgttaatgaaatttttaacatgtgctctaaaggcataagttaatatttc 9374027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 35327847 - 35327930
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||| ||| ||||||| |||| ||||||| |||||||||| ||| || | ||||| |||||||||||||||||||    
T  35327847 aataaattaacacagttttcaatacacaattactattagtggaattctta-catgtgtcttaagggcacaagttaacatttccct 35327930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 115
Target Start/End: Complemental strand, 10500399 - 10500328
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccct 115  Q
    ||||||| ||||||||| || |||||||||| ||||||||||| |||||| |||| | ||||||| ||||||    
T  10500399 acattttgagcaataaagtaacacaatttccgatacataatttttattagtggaaatattaacatgtgccct 10500328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 299
Target Start/End: Original strand, 24765304 - 24765399
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    ||||||||||||||||||| ||||  ||||||||||| |||||| |||||| || ||||  || ||||| | || |||||||| || |||||||||    
T  24765304 ggtcttgttaacgagtgcctctaaagcactctttaaggatcccaaatttagaaaatattccttaaaaaaatcaaatattacaaattccaatgcatt 24765399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 55 - 137
Target Start/End: Complemental strand, 14776352 - 14776270
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||||| |||||||| |||||||||||| ||| ||    |||||||||||| ||| |||| | |||||||||||||||||    
T  14776352 aataaattaacacaattttcaatacataattactaatattaaaattcttaacatgtgctctaatggcacaagttaacatttcc 14776270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 253 - 343
Target Start/End: Complemental strand, 33067808 - 33067718
Alignment:
Q  253 agtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||||||||||  |||||||||| || | |||||||||  |||| ||| |||||| ||||||| || | |||||||| ||||||||||||||    
T  33067808 agtaattattcatttaaaaagtcaattgttacaatttataatgtattaaatacacaatttttaataagaaacttatcatttaaagtgttta 33067718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 2888877 - 2888990
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||| ||||||| | |||||||||||||||||   || | || ||||||||| ||| |||||||||| |||| | |||| ||||| ||| | |    
T  2888877 ggtcttgttaatgagtgccaccaagacactctttaagcacttcaaaatttgtaattattttttaaaaaagttaaatatttcgatttccaatgtattgact 2888976  T
Q  304 acataatttttcat 317  Q
    ||| | ||||||||    
T  2888977 acacactttttcat 2888990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 25622503 - 25622615
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||| ||  |  |||||||||| ||| | | ||| |||||||||| ||| ||||  | || ||||||||||||||||||||| | |    
T  25622503 ggtcttgttaacgagtgctcccgatgcactctttaaacattctaaattaagtaattatt-tttaaaaatatcaaatattacaattttcaatgcattaatt 25622601  T
Q  304 acataatttttcat 317  Q
    ||||| ||||||||    
T  25622602 acatattttttcat 25622615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 205 - 281
Target Start/End: Original strand, 21431049 - 21431124
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactat 281  Q
    |||||||||||||||| ||| | |||||| |||||||||||||   |||||||||||| ||| ||||||| ||||||    
T  21431049 gtcttgttaacgagtgtcccga-gacactttttaagcatcccaatcttagtaattattttttaaaaaagtcaactat 21431124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Complemental strand, 40534300 - 40534216
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||| ||||||| |||| | ||||| |||||||||||| | | ||||||    ||||||||||||||||||    
T  40534300 aataaattaacacaattttcaatacacaattacgattagtggaattcttaacttgtaccctaaatgtacaagttaacatttccct 40534216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 100 - 135
Target Start/End: Original strand, 25083852 - 25083887
Alignment:
Q  100 tcttaacatatgccctaaggacacaagttaacattt 135  Q
    |||||||||||||||||||| |||||||||||||||    
T  25083852 tcttaacatatgccctaagggcacaagttaacattt 25083887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 253 - 335
Target Start/End: Complemental strand, 9049238 - 9049157
Alignment:
Q  253 agtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaa 335  Q
    |||||||||| |||||||| ||||| | || |||||||||||||||| | |||| || |||| | |||||| |||||||||||    
T  9049238 agtaattattcttttaaaatgttaaatttttcaattttcaatgcattaattacacaaattttta-taaaaagttattatttaa 9049157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 90
Target Start/End: Complemental strand, 12944259 - 12944217
Alignment:
Q  48 tttaagcaataaattaccacaatttccaatacataatttctat 90  Q
    |||||| ||||||||| |||||||| |||||||||||||||||    
T  12944259 tttaagaaataaattagcacaattttcaatacataatttctat 12944217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 284 - 338
Target Start/End: Complemental strand, 33963000 - 33962947
Alignment:
Q  284 caattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagt 338  Q
    |||||||||||||||| ||| || ||||||||| |||||| ||||||||||||||    
T  33963000 caattttcaatgcattgaatgcacaatttttca-taaaaatttattatttaaagt 33962947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 267 - 308
Target Start/End: Original strand, 4616870 - 4616911
Alignment:
Q  267 taaaaagttaactattacaattttcaatgcattcaatacata 308  Q
    ||||||||||| ||||||||||||||||||||| | ||||||    
T  4616870 taaaaagttaaatattacaattttcaatgcattgattacata 4616911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 47 - 132
Target Start/End: Original strand, 27414138 - 27414223
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaaca 132  Q
    |||| |||||||||| | | |||||||| | ||||||||| |||||| | ||| |||||||| || ||| ||| ||||||||||||    
T  27414138 ttttgagcaataaatgaacgcaatttccgagacataatttttattagtgaaatccttaacatgtgtccttagggcacaagttaaca 27414223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 101 - 134
Target Start/End: Original strand, 30354058 - 30354091
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacatt 134  Q
    |||||||| |||||||||||||||||||||||||    
T  30354058 cttaacatgtgccctaaggacacaagttaacatt 30354091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 44 - 93
Target Start/End: Complemental strand, 41766375 - 41766326
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattag 93  Q
    ||||||| ||||||||| || |||||||| ||||||||||||| ||||||    
T  41766375 acattttgagcaataaaataacacaattttcaatacataatttatattag 41766326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 205 - 277
Target Start/End: Complemental strand, 431770 - 431698
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaa 277  Q
    |||||||||||||||||||| | || |||||||||  || | ||||| |||||||||| ||| |||| |||||    
T  431770 gtcttgttaacgagtgcccccaggatactctttaaatattctatattaagtaattattctttaaaaatgttaa 431698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 11941540 - 11941488
Alignment:
Q  88 tattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    |||||| | ||| |||||||| |||||||| | ||||||||||||||||||||    
T  11941540 tattagtgtaatccttaacatgtgccctaaaggcacaagttaacatttcccta 11941488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 59 - 139
Target Start/End: Complemental strand, 25904905 - 25904825
Alignment:
Q  59 aattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||| || ||||| ||| ||||||||||||| || | |||||||||||| || ||||||   |||| |||||||||||||    
T  25904905 aattaacataattttcaagacataatttctatcagtgaaattcttaacatgtgacctaagagtacaaattaacatttccct 25904825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 65; Significance: 2e-28; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 44 - 140
Target Start/End: Complemental strand, 972502 - 972406
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    ||||||||| ||||||||||  ||| |||||||||| |||||| |||||| |||||||||||||| |||||||||||||||||||||||||||||||    
T  972502 acattttaaacaataaattaatacagtttccaatacctaatttttattagtggaattcttaacatgtgccctaaggacacaagttaacatttcccta 972406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 199 - 333
Target Start/End: Complemental strand, 29084042 - 29083908
Alignment:
Q  199 gttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcat 298  Q
    |||||||| |||||||||||||| |    |||| ||||||| ||||| | | |||||||||||| ||||||||||||||||||||||||||| |||||||    
T  29084042 gttaaggttttgttaacgagtgctcacgtgacattctttaatcatcctaaacttagtaattattcttttaaaaagttaactattacaatttttaatgcat 29083943  T
Q  299 tcaatacataatttttcattaaaaacttattattt 333  Q
    | |||||| || |||||| |||||||||| |||||    
T  29083942 ttaatacacaacttttcaataaaaacttactattt 29083908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 44 - 137
Target Start/End: Original strand, 36923591 - 36923684
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||| |||||||||||| ||||||||||||||||||||||||||||| ||||||||||| || |||||||||  ||||| |||||||||||    
T  36923591 acattttgagcaataaattaacacaatttccaatacataatttctattagtggaattcttaatatgtgccctaagagcacaaattaacatttcc 36923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 334
Target Start/End: Complemental strand, 42846117 - 42846012
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaa-tgcattcaatacataatttttcattaaaaacttat 328  Q
    |||||||||||||||| | |||||||||||||| ||| ||||||| ||||||| |||||||||| ||||||||||||| || ||||||||||||||||||    
T  42846117 cactctttaagcatcctaaatttagtaattattctttgaaaaagtcaactatttcaattttcaattgcattcaatacacaacttttcattaaaaacttat 42846018  T
Q  329 tattta 334  Q
     |||||    
T  42846017 cattta 42846012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 28451812 - 28451896
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||||||||| ||||||| |||||| |||||||||||||| |||||||||| |||||||||||||||||||    
T  28451812 aataaattaacacaatttccaatatataatttttattagtggaattcttaacatgtgccctaagggcacaagttaacatttccct 28451896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 44 - 138
Target Start/End: Original strand, 37238850 - 37238944
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||| |||||||||| |||||||||||| | |||||||||||||  |||||||||||||| |||||| ||| ||||||||||||||||||    
T  37238850 acattttaaacaataaattaacacaatttccaaaaaataatttctattaatggaattcttaacatgtgcccttagggcacaagttaacatttccc 37238944  T

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Target: chr3; HSP #7
Raw Score: 59; E-Value: 9e-25
Query Start/End: Original strand, 49 - 135
Target Start/End: Original strand, 50699805 - 50699891
Alignment:
Q  49 ttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||| || || |||||||||    
T  50699805 ttaagcaataaattaacacaatttccaatacatgatttctattagtggaattcttaacatgtgccctaagggcataaattaacattt 50699891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 45 - 141
Target Start/End: Complemental strand, 43310432 - 43310336
Alignment:
Q  45 cattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaa 141  Q
    |||||| |||||||||||| |||||||||||||||| ||||||||||||  ||||||||||||| ||| |||| | ||||||||| |||||||||||    
T  43310432 cattttgagcaataaattaacacaatttccaatacaaaatttctattagtagaattcttaacatgtgctctaaaggcacaagttagcatttccctaa 43310336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 135
Target Start/End: Complemental strand, 21490461 - 21490370
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| | |||||||||| |||||||||||||| ||||||| |||||| |||||||||||||| ||| ||||||||||||||||| ||||    
T  21490461 acattttgaacaataaattaacacaatttccaatatataatttatattagtggaattcttaacatgtgctctaaggacacaagttaatattt 21490370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 44 - 119
Target Start/End: Complemental strand, 28945912 - 28945837
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaagg 119  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||| |||||||||||||| ||||||||||    
T  28945912 acattttaagcaataaattaacacaatttccaatacatgatttttattagtggaattcttaacatgtgccctaagg 28945837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 55 - 137
Target Start/End: Original strand, 13863686 - 13863767
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||||| |||||||||||||||| |||| ||||||| |||||||||||||| |||||||||| |||||||||||||||||    
T  13863686 aataaattaacacaatttccaatacacaattactattagtggaattcttaacatgtgccctaagg-cacaagttaacatttcc 13863767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 328
Target Start/End: Complemental strand, 49362465 - 49362367
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    |||| ||||| ||||||| ||||| |||||||| |||||||||||||||||||||||||| ||||| ||| |||| | ||||||| |||||||||||||    
T  49362465 cactttttaaacatcccaaatttaataattattcttttaaaaagttaactattacaatttccaatgtatttaatatacaattttttattaaaaacttat 49362367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 259 - 366
Target Start/End: Complemental strand, 41309936 - 41309825
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacat---aatttttcattaaaaacttattatttaaagtgtttaga-agtgcccga 354  Q
    |||| |||||||||||||| |||||||||||||||||||||  ||| |    ||||||||||||||||||||| |||||||||||||| | ||||||||     
T  41309936 tattcttttaaaaagttaattattacaattttcaatgcatttgatatagtacaatttttcattaaaaacttatcatttaaagtgtttaaagagtgcccgg 41309837  T
Q  355 aacactcgttaa 366  Q
    ||||||||||||    
T  41309836 aacactcgttaa 41309825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 228 - 343
Target Start/End: Original strand, 16662968 - 16663084
Alignment:
Q  228 gacactctttaagcatcccata--tttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaact 325  Q
    ||||||||||||| |||| | |  ||||||||||||| ||||||||||| |||||||||||||  ||||||| | |||||| || |||| | ||||||||    
T  16662968 gacactctttaagaatccaaaacttttagtaattattattttaaaaagtcaactattacaattaccaatgcagtgaatacacaacttttta-taaaaact 16663066  T
Q  326 tattatttaaagtgttta 343  Q
    ||||||||||||||||||    
T  16663067 tattatttaaagtgttta 16663084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 265 - 327
Target Start/End: Original strand, 24791526 - 24791588
Alignment:
Q  265 tttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||| |||||||||||||||||||| ||||||||||||| |||||||||||||||||    
T  24791526 tttaaaaagtcaactattacaattttcaatgtattcaatacataacttttcattaaaaactta 24791588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 205 - 339
Target Start/End: Complemental strand, 48180307 - 48180173
Alignment:
Q  205 gtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||||||||||||| | |   |||||||||||||||||||  |||||  ||||||| ||||||||||| |||||||||||||| |||||||||   ||    
T  48180307 gtcttgttaacgagtgtctccgggacactctttaagcatccccaatttaacaattattcttttaaaaagtcaactattacaatttccaatgcattggtta 48180208  T
Q  305 cataatttttcattaaaaacttattatttaaagtg 339  Q
    |  ||  |||||| ||||||||| |||||||||||    
T  48180207 cccaacatttcataaaaaacttactatttaaagtg 48180173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 228 - 329
Target Start/End: Complemental strand, 52638271 - 52638171
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||| |||| | |||||||||||||| ||||||||||  |||||||||||||| ||||||| | |||||| ||||||| | ||||||||||    
T  52638271 gacactctttaagaatccaaaatttagtaattattattttaaaaagccaactattacaatttccaatgcagtgaatacacaatttttta-taaaaactta 52638173  T
Q  328 tt 329  Q
    ||    
T  52638172 tt 52638171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 235 - 339
Target Start/End: Original strand, 51351277 - 51351381
Alignment:
Q  235 tttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattta 334  Q
    ||||||||| | | ||||| |||||||| |||||||||||| | ||||| ||||| |||| |||| |||||| |||||||||||||||||||| | ||||    
T  51351277 tttaagcattctaaatttaataattattcttttaaaaagtttagtattataatttccaatacatttaatacacaatttttcattaaaaacttacttttta 51351376  T
Q  335 aagtg 339  Q
    |||||    
T  51351377 aagtg 51351381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 12568694 - 12568785
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||| ||||||||||||  ||||||| ||||| ||||||| |||||  | |||||||||||| |||||||||| |||||||||||||||||    
T  12568694 attttgagcaataaattaagacaatttacaataaataatttttattaatgaaattcttaacatgtgccctaagggcacaagttaacatttcc 12568785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 137
Target Start/End: Original strand, 13545158 - 13545249
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||| ||||||||||||  ||||||| ||||| ||||||| |||||  | |||||||||||| |||||||||| |||||||||||||||||    
T  13545158 attttgagcaataaattaagacaatttacaataaataatttttattaatgaaattcttaacatgtgccctaagggcacaagttaacatttcc 13545249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 21290217 - 21290308
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||||||| || ||||||| |||||||||||||||||  |||||  ||||||| |||| ||||| ||||| ||||||||||||    
T  21290217 ttttaagcaataaattaacataatttccgatacataatttctattaatggaatatttaacatgtgccataagggcacaaattaacatttccc 21290308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 229 - 336
Target Start/End: Original strand, 47638889 - 47638996
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    ||||||||||||||| | | |||||   |||||  ||||||||||||||||||||||||||| |||||| |||||||| |||||||||| || ||||||     
T  47638889 acactctttaagcatactaaatttaactattatgcttttaaaaagttaactattacaatttttaatgcactcaatacacaatttttcataaagaacttac 47638988  T
Q  329 tatttaaa 336  Q
    || |||||    
T  47638989 taattaaa 47638996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 7681637 - 7681721
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||| |||||||||||||||| |||| |||||||  |||||| |||||||||| |||||  |||||||||| ||||||||    
T  7681637 aataaattaacacaatttccaatacacaattactattagtagaattcataacatatgctctaagagcacaagttaaaatttccct 7681721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 249 - 333
Target Start/End: Complemental strand, 12086855 - 12086771
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattattt 333  Q
    |||||||||||||| |||| |||||  | |||||| |||||||| ||||||||||||| | |||||||||||||||||| |||||    
T  12086855 atttagtaattattctttttaaaagacatctattataattttcagtgcattcaatacacattttttcattaaaaacttactattt 12086771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 44 - 132
Target Start/End: Complemental strand, 50360733 - 50360645
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaaca 132  Q
    ||||||| |||||||||||| ||| |||| ||||| ||||||| ||||||  |||||||||| || |||||||||| ||||||||||||    
T  50360733 acattttgagcaataaattaacaccattttcaatatataatttatattagtagaattcttaatatgtgccctaagggcacaagttaaca 50360645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 255 - 318
Target Start/End: Original strand, 26143090 - 26143153
Alignment:
Q  255 taattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcatt 318  Q
    |||||||| ||||||||||| ||||||||||||||| |||||||| |||||| |||||||||||    
T  26143090 taattattcttttaaaaagtcaactattacaattttgaatgcatttaatacacaatttttcatt 26143153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 26900136 - 26900021
Alignment:
Q  230 cactctttaagcatcccatattt-agtaattattgttttaaaaa-gttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||||| || | |  ||||||| ||||||||| || |||||||||||||||||||||||| | ||||||| |||||||  |||| |||    
T  26900136 cactctttaagcatcccaaatgtgaaaaattattcttttaaaaaagtcaactattacaattttcaatgcatttattacataacttttcatataaaattta 26900037  T
Q  328 ttatttaaagtgttta 343  Q
      ||||||||||||||    
T  26900036 ccatttaaagtgttta 26900021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 230 - 343
Target Start/End: Complemental strand, 39551966 - 39551854
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||| ||||||||| ||| |||||| ||||||| ||||||||| | |||||| |||||||||||| || |||||| | || ||||||| || |||||| |    
T  39551966 cactatttaagcataccaaatttagcaattattcttttaaaaaatcaactat-acaattttcaatacactcaataaacaacttttcataaagaacttact 39551868  T
Q  330 atttaaagtgttta 343  Q
    | ||||||||||||    
T  39551867 aattaaagtgttta 39551854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 259 - 327
Target Start/End: Original strand, 42939856 - 42939924
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||| ||||||||||| ||||||| |||||||||||| ||| |||||| ||||||||||| ||||||||    
T  42939856 tattcttttaaaaagtcaactattgcaattttcaatgaatttaatacacaatttttcatttaaaactta 42939924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 247 - 318
Target Start/End: Complemental strand, 22730580 - 22730509
Alignment:
Q  247 atatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcatt 318  Q
    |||| ||||||||||| ||||||||||| |||||||| ||||||||||||||| | |||| || ||||||||    
T  22730580 atatctagtaattattcttttaaaaagtcaactattataattttcaatgcattaattacaaaaattttcatt 22730509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 249 - 304
Target Start/End: Complemental strand, 11132657 - 11132602
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaata 304  Q
    |||||| ||||||| ||| |||||||||||||||||||||||||||| ||| ||||    
T  11132657 atttagcaattattatttcaaaaagttaactattacaattttcaatgtattgaata 11132602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 248 - 339
Target Start/End: Complemental strand, 35177909 - 35177818
Alignment:
Q  248 tatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| |||||||| |||||||||||||| ||||| ||| ||||||||||| | || | |||||||  ||||||| ||| ||||| |||||    
T  35177909 tatttaataattattcttttaaaaagttaaatattataatattcaatgcatttagtatacaattttttcttaaaaatttactattttaagtg 35177818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 204 - 343
Target Start/End: Complemental strand, 48811505 - 48811367
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| |||||  | |||||| |||||||| |||| | |||||| || ||||  || |||||||  | | |||||| |||||||||||| | |    
T  48811505 ggtcttgttaactagtgcatccaagacattctttaaggatcctaaatttagaaaatattcattaaaaaagtctaatgttacaaatttcaatgcattgatt 48811406  T
Q  304 acataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||| ||||||||| |||||||||| |||| ||||| ||||    
T  48811405 acacaatttttca-taaaaacttactattaaaagttttta 48811367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 44 - 115
Target Start/End: Original strand, 51981723 - 51981794
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccct 115  Q
    ||||||| | |||||||||| ||||||||||||| ||||||||| ||||  |||||||||| ||| ||||||    
T  51981723 acattttgaacaataaattaacacaatttccaatgcataatttccattattggaattcttatcatgtgccct 51981794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 57 - 135
Target Start/End: Original strand, 12736187 - 12736264
Alignment:
Q  57 taaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| | |||||| | | ||||||||| |||||| |||||  |||||||||||||||||||| |||||||||||||    
T  12736187 taaattaacgcaattttcgagacataatttttattagtggaatg-ttaacatatgccctaaggacccaagttaacattt 12736264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 257 - 339
Target Start/End: Original strand, 40673456 - 40673538
Alignment:
Q  257 attattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| ||||||||| | ||||||||||||||  |||  ||||||||||  | ||||| |||||||||||| ||||||||||    
T  40673456 attattcttttaaaaattcaactattacaatttctaatatattcaatacactacttttctttaaaaacttatcatttaaagtg 40673538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 50524335 - 50524413
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||| |||||||||||||||||||||| | |||   ||||||||||||||| ||  || | |||||||||||||||    
T  50524335 aataaattaacacaatttccaatacataatttttgttaatagaattcttaacatattcc--aaaggcacaagttaacattt 50524413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 55 - 139
Target Start/End: Original strand, 13433753 - 13433837
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||||  || ||||| ||||||| ||||  |||||| ||||||||||| |||||||||| | | | ||||||||||||||||    
T  13433753 aataaattcacataattttcaatacaaaattattattagtggaattcttaatatatgccctaggaaaataagttaacatttccct 13433837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 135
Target Start/End: Original strand, 28212062 - 28212098
Alignment:
Q  99 ttcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||||||||||||||||||||||||| |||||    
T  28212062 ttcttaacatatgccctaaggacacaagttagcattt 28212098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 44 - 104
Target Start/End: Complemental strand, 43343739 - 43343680
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattctta 104  Q
    ||||||| |||||||||||| ||||||| |||||||||||||||| ||||  |||||||||    
T  43343739 acattttgagcaataaattaacacaatt-ccaatacataatttcttttagtagaattctta 43343680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 287
Target Start/End: Original strand, 52249319 - 52249378
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaat 287  Q
    |||||| |||||| || | | ||||| |||||||| ||||||||||||||||||||||||    
T  52249319 gacactttttaagtatacaaaatttaataattattcttttaaaaagttaactattacaat 52249378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 48 - 118
Target Start/End: Original strand, 28963452 - 28963522
Alignment:
Q  48 tttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaag 118  Q
    |||||||||||||||| |  |||||||||| ||| ||||||||||| | |||| ||||||| || ||||||    
T  28963452 tttaagcaataaattaacttaatttccaatgcatcatttctattagtgaaatttttaacatgtgtcctaag 28963522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 268 - 338
Target Start/End: Complemental strand, 32606454 - 32606386
Alignment:
Q  268 aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagt 338  Q
    ||||||||||| ||| |||||| | ||||||| ||| |||||||||||| |||||| ||||||||||||||    
T  32606454 aaaaagttaac-atttcaatttccgatgcattgaatgcataatttttca-taaaaatttattatttaaagt 32606386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 230 - 332
Target Start/End: Complemental strand, 45529230 - 45529129
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||||| |||||| || |||| ||  ||||||| ||   |||||| ||||| |||||| | ||||||| |||||| |||||||||| |    
T  45529230 cactctttaagcatcccaaatttagaaaatattcttcaaaaaagtcaaacgttacaagtttcagtgcattgattacataaattttca-taaaaacttact 45529132  T
Q  330 att 332  Q
    |||    
T  45529131 att 45529129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 249 - 299
Target Start/End: Complemental strand, 46093643 - 46093593
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcatt 299  Q
    |||||| ||||||| ||| |||||||||||||||||||||||  |||||||    
T  46093643 atttagcaattattctttaaaaaagttaactattacaattttttatgcatt 46093593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 132
Target Start/End: Complemental strand, 12789886 - 12789853
Alignment:
Q  99 ttcttaacatatgccctaaggacacaagttaaca 132  Q
    |||||||||| |||||||||||||||||||||||    
T  12789886 ttcttaacatgtgccctaaggacacaagttaaca 12789853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 57 - 142
Target Start/End: Complemental strand, 38773588 - 38773503
Alignment:
Q  57 taaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccctaaa 142  Q
    ||||||| | |||||| ||| ||| |||||| ||||| | ||||||||| || |||||||||  ||| ||||||||||||| ||||    
T  38773588 taaattaacgcaattttcaagacaaaatttccattagtgaaattcttaatatgtgccctaagagcacgagttaacatttccttaaa 38773503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 110 - 142
Target Start/End: Original strand, 4127508 - 4127540
Alignment:
Q  110 tgccctaaggacacaagttaacatttccctaaa 142  Q
    |||||||||| ||||||||||||||||||||||    
T  4127508 tgccctaagggcacaagttaacatttccctaaa 4127540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 30578786 - 30578750
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacatttcc 137  Q
    |||||||| |||||||||| |||||||||||||||||    
T  30578786 cttaacatgtgccctaagggcacaagttaacatttcc 30578750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 139
Target Start/End: Complemental strand, 37662958 - 37662918
Alignment:
Q  99 ttcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| ||||||| |||| |||||||||||||||||||    
T  37662958 ttcttaacttatgccccaagggcacaagttaacatttccct 37662918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 55 - 135
Target Start/End: Complemental strand, 46515857 - 46515777
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||||| |||||||| | |||||  |||| |||||| | |||  |||||||||| | |||||||||||||| ||||||    
T  46515857 aataaattaacacaattttcgatacaatatttttattagtgaaatcattaacatatgtcttaaggacacaagttcacattt 46515777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 139
Target Start/End: Original strand, 50170594 - 50170634
Alignment:
Q  99 ttcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||||||| ||||||| |||| |||||||||||||||||||    
T  50170594 ttcttaacttatgccccaagggcacaagttaacatttccct 50170634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 63; Significance: 4e-27; HSPs: 38)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 249 - 339
Target Start/End: Complemental strand, 17215775 - 17215685
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||||||||| ||||||||||| ||||||||||||||||||||||||||||| | ||||||| ||||||||||||  ||||||||||    
T  17215775 atttagtaattatttttttaaaaagtcaactattacaattttcaatgcattcaataaacaattttttattaaaaacttaccatttaaagtg 17215685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 204 - 339
Target Start/End: Original strand, 3766249 - 3766381
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   | |||||||||||||||||| |||| | ||||||| ||||||||||| || |||||||||||  ||| |||||| |    
T  3766249 ggtcttgttaacgagtgcccc---ggcactctttaagcatcccaaatttggaaattattcttttaaaaagtcaattattacaatttataatacattcatt 3766345  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||| |||||||  ||||||||| ||||||||||    
T  3766346 acataacttttcatataaaacttatcatttaaagtg 3766381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 28874394 - 28874507
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||  | | |||||||||||| |||| |||| | |||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||    
T  28874394 cactctttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaatttttcattaaaaacttgtt 28874493  T
Q  330 atttaaagtgttta 343  Q
    ||||||| ||||||    
T  28874494 atttaaaatgttta 28874507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 259 - 339
Target Start/End: Original strand, 31855078 - 31855158
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| ||||||||||| |||||||||||||| |||||||||||||| | |||||||||||||||||||| |||||||||||    
T  31855078 tattattttaaaaagtcaactattacaatttccaatgcattcaatatacaatttttcattaaaaacttactatttaaagtg 31855158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 255 - 339
Target Start/End: Original strand, 32823697 - 32823781
Alignment:
Q  255 taattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||||||| |||| |||||| || |||||||||||||||||||||||||||| || |||||||||||||||| ||||||||||||    
T  32823697 taattattcttttgaaaagtcaattattacaattttcaatgcattcaatacacaacttttcattaaaaacttgttatttaaagtg 32823781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 228 - 323
Target Start/End: Complemental strand, 26669392 - 26669297
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||||   |||||||| |||||||| ||||||||||| ||||||||||||||||| || ||| ||||||||| |||||||||||||    
T  26669392 gacactctttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaa 26669297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 230 - 336
Target Start/End: Original strand, 1840978 - 1841084
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||||||   | ||||| |||||||| ||||||||| | |||||||||||||| |||||||||||||||| || |||| |||||||||||||     
T  1840978 cactctttaagcatattaaatttaataattattcttttaaaaaatcaactattacaatttccaatgcattcaatacacaacttttaattaaaaacttatc 1841077  T
Q  330 atttaaa 336  Q
    |||||||    
T  1841078 atttaaa 1841084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 46 - 126
Target Start/End: Original strand, 32785851 - 32785931
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaag 126  Q
    ||||| ||||||||||||  | |||||||||||||||||||||||||| |||||||||||||| |||||||||| ||||||    
T  32785851 attttgagcaataaattaaaataatttccaatacataatttctattagtggaattcttaacatgtgccctaaggccacaag 32785931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 228 - 343
Target Start/End: Complemental strand, 2692543 - 2692429
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    ||||||||||||| |||| | |||||||||||||| ||||||||||| |||||||||||||| ||||| | | |||||| || |||| ||| |||| |||    
T  2692543 gacactctttaagaatccaaaatttagtaattattattttaaaaagtcaactattacaatttccaatgaagtgaatacacaactttttatt-aaaattta 2692445  T
Q  328 ttatttaaagtgttta 343  Q
     |||||||||||||||    
T  2692444 ctatttaaagtgttta 2692429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 230 - 333
Target Start/End: Original strand, 30739594 - 30739697
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    ||||||||||| || | | |||||||||||||| | ||||||||||||||  ||| |||| |||||||||||||||| |||||||||||||||| ||||     
T  30739594 cactctttaagtattctaaatttagtaattattctattaaaaagttaactggtacgatttccaatgcattcaatacacaatttttcattaaaaatttatc 30739693  T
Q  330 attt 333  Q
    ||||    
T  30739694 attt 30739697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 249 - 338
Target Start/End: Complemental strand, 24103870 - 24103781
Alignment:
Q  249 atttagtaattatt-gttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagt 338  Q
    |||||||||||||| |||||||||| ||||||||||||||||| |||| ||| |||||| ||||||| |||||||| ||||||||||||||    
T  24103870 atttagtaattatttgttttaaaaa-ttaactattacaatttttaatgaatttaatacacaatttttaattaaaaatttattatttaaagt 24103781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 228 - 339
Target Start/End: Complemental strand, 19293566 - 19293455
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactta 327  Q
    |||||||||||||||||| | |||||  ||||||| |||||||||||||||||||||||||| | ||||| ||||||   || ||||||| |||||| ||    
T  19293566 gacactctttaagcatcctaaatttaacaattattattttaaaaagttaactattacaatttccgatgcactcaataaccaacttttcataaaaaaccta 19293467  T
Q  328 ttatttaaagtg 339  Q
     || ||||||||    
T  19293466 ctaattaaagtg 19293455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 57 - 135
Target Start/End: Complemental strand, 17506497 - 17506419
Alignment:
Q  57 taaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacattt 135  Q
    ||||||| ||||||||| ||||||||||||||||||| |||||| ||||||||||| |||||  ||||||||| |||||    
T  17506497 taaattaacacaatttcaaatacataatttctattagtggaatttttaacatatgctctaagagcacaagttagcattt 17506419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 238 - 339
Target Start/End: Original strand, 7421675 - 7421776
Alignment:
Q  238 aagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaag 337  Q
    |||||| ||| ||||||||||||||  |||||||||| || ||||||||||||||||||||| |||||| || |||| | |||||  ||| |||||||||    
T  7421675 aagcattccaaatttagtaattatttatttaaaaagtcaaatattacaattttcaatgcatttaatacacaactttttaataaaactttactatttaaag 7421774  T
Q  338 tg 339  Q
    ||    
T  7421775 tg 7421776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 228 - 339
Target Start/End: Original strand, 27778747 - 27778857
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgtttt-aaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaactt 326  Q
    ||||||||||||| |||| | |||||||||||||| |||| ||||||| ||| |||| ||||||||||||||||||||||  |||||||| |||||| ||    
T  27778747 gacactctttaagaatcctaaatttagtaattattttttttaaaaagtcaacgattataattttcaatgcattcaataca-catttttca-taaaaattt 27778844  T
Q  327 attatttaaagtg 339  Q
    |  ||||||||||    
T  27778845 accatttaaagtg 27778857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 206 - 326
Target Start/End: Complemental strand, 34232090 - 34231970
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatac 305  Q
    |||||||||||||||||||  || |||||||||| ||||  | ||||| |||||||| ||| |||||  ||||| || |||||||||||| ||| |||||    
T  34232090 tcttgttaacgagtgccccggaggcactctttaaccatcttaaatttaataattattctttaaaaaaaataactgttgcaattttcaatgtatttaatac 34231991  T
Q  306 ataatttttcattaaaaactt 326  Q
    | || |||||||||| |||||    
T  34231990 acaacttttcattaagaactt 34231970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 204 - 339
Target Start/End: Complemental strand, 5446799 - 5446664
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    ||||||||||||||||| |||   |||||| | ||||||| | | | |||||||||||| |||| || ||| |||| |||||||||||||||||||||||    
T  5446799 ggtcttgttaacgagtgtcccagggacactttgtaagcattctaaaattagtaattattcttttgaatagtcaactgttacaattttcaatgcattcaat 5446700  T
Q  304 acataatttttcattaaaaacttattatttaaagtg 339  Q
     ||  | |||| |||||||| ||  |||||||||||    
T  5446699 gcaccacttttaattaaaaaattgctatttaaagtg 5446664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 58 - 125
Target Start/End: Original strand, 34396210 - 34396277
Alignment:
Q  58 aaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaa 125  Q
    |||||| |||||||| |||||||||||||||||||| |||||| ||||||| ||||||||| ||||||    
T  34396210 aaattaacacaattttcaatacataatttctattagcggaattattaacatgtgccctaagaacacaa 34396277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 229 - 339
Target Start/End: Complemental strand, 1479204 - 1479095
Alignment:
Q  229 acactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttat 328  Q
    |||||||||||  |||||| |||||||||| ||| ||||||||||  || ||| ||||||||||||||||| |||||| |||||| || |||||| |||     
T  1479204 acactctttaaagatcccaaatttagtaatcattcttttaaaaaggcaattatgacaattttcaatgcattgaatacacaattttaca-taaaaatttac 1479106  T
Q  329 tatttaaagtg 339  Q
     ||||||||||    
T  1479105 catttaaagtg 1479095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 369
Target Start/End: Original strand, 9762774 - 9762938
Alignment:
Q  206 tcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatac 305  Q
    |||||||||||||||||||  | ||||||||||| ||||  | ||||||| ||| || ||||||||||| || ||||| |||||  ||| |||||| |||    
T  9762774 tcttgttaacgagtgcccccgaaacactctttaaacatcttaaatttagt-atttttcttttaaaaagtcaattattataatttctaatacattcagtac 9762872  T
Q  306 ataatttttca-ttaaaaacttattatttaaagtgtttaga-agtgcccgaaacactcgttaacat 369  Q
    | || |||||| ||||||| |||  |||||||||| ||| | |||||||| | |||||||||||||    
T  9762873 acaacttttcatttaaaaatttaccatttaaagtgattaaagagtgcccggagcactcgttaacat 9762938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 249 - 338
Target Start/End: Original strand, 23399124 - 23399213
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagt 338  Q
    |||||| ||||||| |||||||||||||||||||| ||||||||||| ||||  | ||||| |||| ||  |||||||| ||||||||||    
T  23399124 atttagaaattattcttttaaaaagttaactattataattttcaatgtattcgttgcataacttttaatataaaacttaatatttaaagt 23399213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 137
Target Start/End: Complemental strand, 31767874 - 31767781
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcc 137  Q
    ||||||| | |||||||||| |||||||| |||| |||||||||||||   |||||||||||||| ||| |||||| | ||| |||||||||||    
T  31767874 acatttttaccaataaattaacacaattttcaatgcataatttctatttatggaattcttaacatgtgctctaagggcgcaaattaacatttcc 31767781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 264 - 339
Target Start/End: Original strand, 30801770 - 30801845
Alignment:
Q  264 ttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| ||||| ||| ||||| |||||||||||||||||||||| || |||| |||||||||||  |||||||||||    
T  30801770 ttttgaaaagctaagtattataattttcaatgcattcaatacacaacttttaattaaaaacttgctatttaaagtg 30801845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 200 - 294
Target Start/End: Complemental strand, 11721019 - 11720925
Alignment:
Q  200 ttaaggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaat 294  Q
    ||||| ||||||||||||||| |  | || |||||||||| ||||| | |||||  ||||||| |||||| |||| |||||||||||||||||||    
T  11721019 ttaagatcttgttaacgagtgtctttgagtcactctttaaacatcctaaatttaacaattattcttttaagaagtcaactattacaattttcaat 11720925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 47 - 140
Target Start/End: Complemental strand, 154275 - 154182
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    |||| |||||||||||| | |||||||  |  ||||||||||||||| ||||| |||||||| |||||||| | | ||| ||||||||||||||    
T  154275 tttttagcaataaattaacgcaatttctgaagcataatttctattagtggaatccttaacatgtgccctaaaggcgcaaattaacatttcccta 154182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 253 - 306
Target Start/End: Complemental strand, 34235466 - 34235413
Alignment:
Q  253 agtaattattgttttaaaaagttaactattacaattttcaatgcattcaataca 306  Q
    |||||||||| ||||||||| ||||||||||||||||||||| |||| ||||||    
T  34235466 agtaattattcttttaaaaaattaactattacaattttcaatacatttaataca 34235413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 249 - 343
Target Start/End: Original strand, 2864892 - 2864985
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcat-taaaaacttattatttaaagtgttta 343  Q
    |||||| ||||||| ||| |||||  ||||||||||||||| ||||||||| |||||| ||||||||||  |||||||||  ||||||| ||||||    
T  2864892 atttagcaattattttttcaaaaa--taactattacaatttacaatgcattaaatacacaatttttcatcaaaaaacttaccatttaaaatgttta 2864985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 31854763 - 31854819
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaatta 260  Q
    |||||| ||||||||||||||  |||||||||||||||||| || ||||||||||||    
T  31854763 ggtcttattaacgagtgcccccgagacactctttaagcatctcaaatttagtaatta 31854819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 233 - 323
Target Start/End: Original strand, 2884087 - 2884175
Alignment:
Q  233 tctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||| || ||| |||||| |||| || ||| |||||  ||||||||||||||| ||||||||| |||||| |||||||||| |||||    
T  2884087 tctttaaggattccaaatttagcaattgttttttcaaaaa--taactattacaatttacaatgcattaaatacacaatttttcataaaaaa 2884175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 46 - 133
Target Start/End: Original strand, 3213728 - 3213815
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacat 133  Q
    ||||| |||||||||||| || ||||| | ||| |||||||||||||   |||| ||||||||||||| ||||  |||||||||||||    
T  3213728 attttgagcaataaattagcataattttccatatataatttctattaatagaatgcttaacatatgccttaagagcacaagttaacat 3213815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 44 - 117
Target Start/End: Original strand, 33972674 - 33972748
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataattt-ctattagaggaattcttaacatatgccctaa 117  Q
    ||||||| | |||||||||| ||  |||||||||||||||||| |||||||  ||||||||||||| ||||||||    
T  33972674 acattttgaacaataaattaacatcatttccaatacataatttcctattagtagaattcttaacatgtgccctaa 33972748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 204 - 317
Target Start/End: Original strand, 35229261 - 35229374
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||||||||||||   ||||||||||||| | |||| ||||||  |||||| ||| ||||||| |  |||||||| || |||| |||| ||     
T  35229261 ggtcttgttaacgagtgcccccgggacactctttaaggaacccaaatttagcgattattctttcaaaaagtcacatattacaaattccaatacattgaac 35229360  T
Q  304 acataatttttcat 317  Q
    ||| || |||||||    
T  35229361 acacaacttttcat 35229374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 49 - 92
Target Start/End: Complemental strand, 4011283 - 4011240
Alignment:
Q  49 ttaagcaataaattaccacaatttccaatacataatttctatta 92  Q
    ||||| ||||||||  ||||||||||||||||||||||||||||    
T  4011283 ttaagaaataaatttgcacaatttccaatacataatttctatta 4011240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 204 - 327
Target Start/End: Original strand, 15588624 - 15588746
Alignment:
Q  204 ggtcttgttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaat 303  Q
    |||||||||||| |||||  |  ||||| |||||||| ||  || |||||  || |||| ||| ||||| |||| | |||||| |||||||||||| | |    
T  15588624 ggtcttgttaacaagtgcttccgagacattctttaaggatatcaaatttataaaatattctttaaaaaaattaaatgttacaaatttcaatgcattgatt 15588723  T
Q  304 acataatttttcattaaaaactta 327  Q
    ||||||||||||| ||||||||||    
T  15588724 acataatttttca-taaaaactta 15588746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 46 - 108
Target Start/End: Complemental strand, 8853702 - 8853640
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    ||||| |||||||||||| |||||||| ||||||||  ||| |||||  ||||||||||||||    
T  8853702 attttgagcaataaattaacacaattttcaatacattgtttttattaatggaattcttaacat 8853640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 1371256 - 1371183
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaa 322  Q
    ||||| |||||||| ||||||||||| ||||   ||||||||||||||||| |||| |  ||||||||| ||||    
T  1371256 atttaataattattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttcataaaaa 1371183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 249 - 322
Target Start/End: Complemental strand, 1379004 - 1378931
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaa 322  Q
    ||||| |||||||| ||||||||||| ||||   ||||||||||||||||| |||| |  ||||||||| ||||    
T  1379004 atttaataattattcttttaaaaagtcaacttccacaattttcaatgcattgaatatacgatttttcataaaaa 1378931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 271 - 343
Target Start/End: Original strand, 3443902 - 3443973
Alignment:
Q  271 aagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtgttta 343  Q
    ||||||| |||||||||||||||  ||||| |||||||| || ||| ||||||||| ||| ||||||| ||||    
T  3443902 aagttaaatattacaattttcaagacattctatacataaattctca-taaaaactttttaattaaagttttta 3443973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0419 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0419
Description:

Target: scaffold0419; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 230 - 343
Target Start/End: Original strand, 1060 - 1173
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||  | | |||||||||||| |||| |||| | |||||||| ||||| |||||||||||||||| ||||||||||||||||||| ||    
T  1060 cactctttaagcatcataaaattagtaattattcttttgaaaaatcaactattataatttccaatgcattcaatacaaaatttttcattaaaaacttgtt 1159  T
Q  330 atttaaagtgttta 343  Q
    ||||||| ||||||    
T  1160 atttaaaatgttta 1173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 46 - 139
Target Start/End: Original strand, 36418 - 36511
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||| || ||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||  ||||| |||||||||||||||||||    
T  36418 attttgagaaataaattaacacaatttccaatacataatttctattagtggaattcttaacatgtgctttaagggcacaagttaacatttccct 36511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1157 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold1157
Description:

Target: scaffold1157; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 47 - 138
Target Start/End: Original strand, 1952 - 2043
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccc 138  Q
    ||||||||||||||||| |||||||| | | |||||||||||||||| |||||  ||||||| |||||||||| ||||||||||||||||||    
T  1952 ttttaagcaataaattaacacaattttcgagacataatttctattagtggaatcattaacatgtgccctaagggcacaagttaacatttccc 2043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0119 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 228 - 323
Target Start/End: Original strand, 1401 - 1496
Alignment:
Q  228 gacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||||||||||||   |||||||| |||||||| ||||||||||| ||||||||||||||||| || ||| ||||||||| |||||||||||||    
T  1401 gacactctttaagcacttcatatttaataattattcttttaaaaagtcaactattacaattttcactgtatttaatacataacttttcattaaaaa 1496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 56; Significance: 6e-23; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 103760 - 103657
Alignment:
Q  230 cactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttatt 329  Q
    |||||||||||||||    |||||||||||||| |||||||||||  | |||||||||||| ||||||||||||| | |||||||||||||||| |||||    
T  103760 cactctttaagcatctttgatttagtaattattcttttaaaaagtcgaatattacaatttttaatgcattcaatatacaatttttcattaaaaatttatt 103661  T
Q  330 attt 333  Q
    ||||    
T  103660 attt 103657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 44 - 139
Target Start/End: Original strand, 260378 - 260473
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    ||||||| | |||||||||| ||||| || |||||||||||||||||||| || |||||||| || |||||| ||| ||||||||| |||||||||    
T  260378 acattttgaacaataaattaacacaaatttcaatacataatttctattagtggtattcttaatatgtgcccttagggcacaagttatcatttccct 260473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 140
Target Start/End: Complemental strand, 21313 - 21228
Alignment:
Q  55 aataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttcccta 140  Q
    ||||||||| |||||||||||||| ||||||| |||||  |||||||||||||| || ||||| | ||||||||||||||| ||||    
T  21313 aataaattaacacaatttccaatatataatttttattattggaattcttaacatgtgtcctaaaggcacaagttaacattttccta 21228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0268 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0268
Description:

Target: scaffold0268; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 259 - 339
Target Start/End: Complemental strand, 20330 - 20251
Alignment:
Q  259 tattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaacttattatttaaagtg 339  Q
    |||| ||||||||||||||||||||||||||  |||||||| |||||| || |||||| ||||||||||| ||||||||||    
T  20330 tattcttttaaaaagttaactattacaatttcaaatgcattaaatacacaacttttca-taaaaacttatcatttaaagtg 20251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 239 - 323
Target Start/End: Complemental strand, 335950 - 335866
Alignment:
Q  239 agcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    ||||||||| ||||||||||||||  ||| ||||||||| ||||| ||||||||||| |||| ||||| || |||||||||||||    
T  335950 agcatcccaaatttagtaattattcatttcaaaagttaattattataattttcaatgtattcgatacacaacttttcattaaaaa 335866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 3529 - 3615
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaaca 132  Q
    ||||||| ||||||| || ||||||||| ||| |||||||| |||||  |||||||||| ||| | |||||||||||||||||||||    
T  3529 attttaaacaataaactaacacaatttctaatgcataatttttattattggaattcttatcatgtaccctaaggacacaagttaaca 3615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 46 - 132
Target Start/End: Original strand, 130506 - 130592
Alignment:
Q  46 attttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaaca 132  Q
    ||||||| ||||||| || ||||||||| ||| |||||||| |||||  |||||||||| ||| | |||||||||||||||||||||    
T  130506 attttaaacaataaactaacacaatttctaatgcataatttttattattggaattcttatcatgtaccctaaggacacaagttaaca 130592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0524 (Bit Score: 42; Significance: 0.00000000000001; HSPs: 1)
Name: scaffold0524
Description:

Target: scaffold0524; HSP #1
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 44 - 105
Target Start/End: Original strand, 1491 - 1552
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaa 105  Q
    ||||||| |||||||||||| |||||||||| |||||||||||||||||  |||||||||||    
T  1491 acattttgagcaataaattaacacaatttccgatacataatttctattaatggaattcttaa 1552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 47 - 139
Target Start/End: Complemental strand, 6765 - 6673
Alignment:
Q  47 ttttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacatatgccctaaggacacaagttaacatttccct 139  Q
    |||| |||||||||||| | |||||||||| | ||||||||||||   ||||| |||||||| ||| |||| | |||||||||||||||||||    
T  6765 ttttgagcaataaattaacgcaatttccaagatataatttctatttatggaatccttaacatgtgctctaaaggcacaagttaacatttccct 6673  T

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Target: scaffold0129 (Bit Score: 41; Significance: 0.00000000000005; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 44 - 108
Target Start/End: Complemental strand, 37617 - 37553
Alignment:
Q  44 acattttaagcaataaattaccacaatttccaatacataatttctattagaggaattcttaacat 108  Q
    |||||||||||||||||||| ||||||||| ||||||| | ||||||||| | ||||||||||||    
T  37617 acattttaagcaataaattaacacaatttctaatacatgacttctattagtgaaattcttaacat 37553  T

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Target: scaffold1444 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold1444
Description:

Target: scaffold1444; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 249 - 323
Target Start/End: Complemental strand, 1024 - 950
Alignment:
Q  249 atttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataatttttcattaaaaa 323  Q
    |||||| |||| || ||||||||||| |||||||||||||||||||| ||| |||||| |  ||||||| |||||    
T  1024 atttagcaattgttcttttaaaaagtcaactattacaattttcaatgtattgaatacacatcttttcataaaaaa 950  T

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Target: scaffold0204 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 211 - 336
Target Start/End: Original strand, 25054 - 25180
Alignment:
Q  211 ttaacgagtgcccctaagacactctttaagcatcccatatttagtaattattgttttaaaaagttaactattacaattttcaatgcattcaatacataat 310  Q
    ||||||||||  ||| ||| ||||||||| |||||   |||||  |||||||  |||||||| | |||||||||||||||||||||||| | |||  |||    
T  25054 ttaacgagtgttcctgagatactctttaaacatccttaatttaacaattatttctttaaaaaatcaactattacaattttcaatgcattgattactcaat 25153  T
Q  311 ttttcat-taaaaacttattatttaaa 336  Q
    |||| ||  ||||||||| ||||||||    
T  25154 tttttataaaaaaacttactatttaaa 25180  T

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Target: scaffold0008 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 101 - 137
Target Start/End: Complemental strand, 240597 - 240561
Alignment:
Q  101 cttaacatatgccctaaggacacaagttaacatttcc 137  Q
    |||||||| |||||||||| |||||||||||||||||    
T  240597 cttaacatgtgccctaagggcacaagttaacatttcc 240561  T

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