View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8491_low_29 (Length: 335)

Name: NF8491_low_29
Description: NF8491
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8491_low_29
NF8491_low_29
[»] chr6 (51 HSPs)
chr6 (29-314)||(20558174-20558455)
chr6 (29-314)||(9281714-9281996)
chr6 (29-318)||(17855066-17855352)
chr6 (215-318)||(21723410-21723513)
chr6 (123-318)||(13195292-13195481)
chr6 (123-318)||(33665762-33665951)
chr6 (123-318)||(34657153-34657341)
chr6 (135-314)||(15003168-15003340)
chr6 (135-312)||(15007344-15007513)
chr6 (123-315)||(17527889-17528075)
chr6 (135-314)||(19215935-19216106)
chr6 (135-308)||(9384595-9384761)
chr6 (125-318)||(15038319-15038504)
chr6 (215-314)||(21706355-21706454)
chr6 (123-319)||(17234560-17234750)
chr6 (29-315)||(20989770-20990052)
chr6 (215-318)||(26965572-26965675)
chr6 (29-318)||(14258782-14259068)
chr6 (142-318)||(16309360-16309527)
chr6 (123-318)||(20470205-20470393)
chr6 (132-318)||(17864427-17864606)
chr6 (135-314)||(20003118-20003290)
chr6 (135-318)||(16137584-16137759)
chr6 (43-311)||(12039691-12039955)
chr6 (215-318)||(19171470-19171573)
chr6 (215-318)||(25964749-25964852)
chr6 (215-318)||(25969396-25969499)
chr6 (215-318)||(25973836-25973939)
chr6 (123-318)||(25805422-25805610)
chr6 (215-316)||(24501879-24501979)
chr6 (228-319)||(11960550-11960641)
chr6 (123-319)||(23882695-23882884)
chr6 (122-318)||(29254918-29255106)
chr6 (215-314)||(28623583-28623681)
chr6 (29-262)||(15897731-15897961)
chr6 (215-316)||(3567426-3567526)
chr6 (215-314)||(12444728-12444824)
chr6 (216-318)||(8465674-8465775)
chr6 (40-102)||(8465882-8465944)
chr6 (218-316)||(19894625-19894722)
chr6 (215-283)||(13870402-13870470)
chr6 (43-102)||(21717759-21717818)
chr6 (43-102)||(21725595-21725654)
chr6 (136-213)||(25782793-25782871)
chr6 (29-102)||(13195195-13195268)
chr6 (122-163)||(17869968-17870009)
chr6 (122-163)||(17879720-17879761)
chr6 (29-102)||(25948400-25948473)
chr6 (41-97)||(13870515-13870571)
chr6 (123-163)||(21706500-21706540)
chr6 (123-163)||(25948497-25948537)
[»] chr4 (39 HSPs)
chr4 (29-318)||(21477980-21478265)
chr4 (29-318)||(8163654-8163942)
chr4 (215-318)||(19659493-19659596)
chr4 (123-318)||(25116792-25116983)
chr4 (215-319)||(23400195-23400299)
chr4 (123-318)||(10190855-10191044)
chr4 (136-318)||(13399306-13399481)
chr4 (124-314)||(25354642-25354824)
chr4 (134-318)||(22554950-22555128)
chr4 (135-307)||(46741763-46741927)
chr4 (123-312)||(33898996-33899179)
chr4 (123-316)||(11905064-11905248)
chr4 (123-311)||(28019273-28019455)
chr4 (214-318)||(10722037-10722140)
chr4 (214-318)||(10935806-10935909)
chr4 (173-318)||(18618118-18618256)
chr4 (135-264)||(23541225-23541347)
chr4 (29-318)||(10724131-10724416)
chr4 (29-318)||(10937900-10938185)
chr4 (134-316)||(11325149-11325324)
chr4 (135-318)||(24143116-24143291)
chr4 (123-316)||(16383859-16384046)
chr4 (122-316)||(15700315-15700503)
chr4 (135-318)||(19894806-19894981)
chr4 (215-314)||(32861702-32861801)
chr4 (143-318)||(50907840-50908008)
chr4 (215-318)||(9069000-9069102)
chr4 (218-318)||(10198253-10198352)
chr4 (144-211)||(11865215-11865283)
chr4 (142-318)||(33745951-33746120)
chr4 (29-101)||(33899398-33899470)
chr4 (215-318)||(16655341-16655443)
chr4 (215-310)||(15162498-15162592)
chr4 (215-318)||(19183683-19183785)
chr4 (122-211)||(13268814-13268904)
chr4 (144-213)||(33737973-33738043)
chr4 (143-212)||(11289438-11289507)
chr4 (29-102)||(25116695-25116768)
chr4 (34-102)||(15700511-15700579)
[»] chr3 (46 HSPs)
chr3 (29-318)||(20748165-20748449)
chr3 (123-318)||(13790648-13790837)
chr3 (124-318)||(17702376-17702564)
chr3 (124-318)||(9031383-9031569)
chr3 (135-318)||(9036689-9036864)
chr3 (122-318)||(295428-295617)
chr3 (215-318)||(24195578-24195681)
chr3 (142-314)||(11656010-11656175)
chr3 (29-314)||(15635878-15636160)
chr3 (179-310)||(8224865-8224989)
chr3 (43-318)||(44452366-44452638)
chr3 (123-316)||(18547617-18547804)
chr3 (125-314)||(23954562-23954745)
chr3 (122-314)||(12054454-12054637)
chr3 (122-318)||(13913760-13913947)
chr3 (133-314)||(13917823-13917995)
chr3 (122-318)||(28051104-28051293)
chr3 (29-310)||(19633759-19634035)
chr3 (124-318)||(7495930-7496115)
chr3 (215-314)||(18476984-18477082)
chr3 (124-318)||(8749010-8749196)
chr3 (215-318)||(6580868-6580970)
chr3 (141-318)||(7479139-7479307)
chr3 (217-318)||(15686160-15686259)
chr3 (215-318)||(21253994-21254097)
chr3 (215-318)||(21718927-21719029)
chr3 (123-318)||(18064207-18064395)
chr3 (123-318)||(18034897-18035085)
chr3 (215-318)||(21094703-21094805)
chr3 (246-318)||(18483372-18483444)
chr3 (215-318)||(17042755-17042857)
chr3 (219-318)||(31649749-31649846)
chr3 (215-318)||(286893-286996)
chr3 (181-329)||(3552204-3552344)
chr3 (220-274)||(1919281-1919335)
chr3 (123-252)||(19531950-19532073)
chr3 (215-316)||(980370-980468)
chr3 (122-264)||(13524736-13524871)
chr3 (135-213)||(11558417-11558495)
chr3 (135-213)||(11567686-11567764)
chr3 (40-102)||(19532097-19532159)
chr3 (29-102)||(1919449-1919522)
chr3 (143-211)||(10189299-10189368)
chr3 (53-102)||(13790575-13790624)
chr3 (143-210)||(10082375-10082443)
chr3 (144-211)||(19584010-19584078)
[»] scaffold0338 (1 HSPs)
scaffold0338 (29-318)||(16215-16501)
[»] chr7 (53 HSPs)
chr7 (29-318)||(13455113-13455398)
chr7 (123-318)||(4458708-4458897)
chr7 (135-318)||(3290685-3290861)
chr7 (142-319)||(15506256-15506426)
chr7 (135-318)||(48797620-48797795)
chr7 (145-318)||(42782747-42782913)
chr7 (29-318)||(16207882-16208168)
chr7 (145-318)||(30226076-30226243)
chr7 (142-311)||(15436037-15436199)
chr7 (135-315)||(11628621-11628794)
chr7 (123-316)||(11521413-11521600)
chr7 (215-318)||(12325868-12325971)
chr7 (29-318)||(645005-645291)
chr7 (135-318)||(7620062-7620237)
chr7 (122-318)||(11588432-11588622)
chr7 (215-318)||(11998934-11999037)
chr7 (215-318)||(14165220-14165323)
chr7 (122-318)||(9564225-9564412)
chr7 (123-318)||(20991511-20991699)
chr7 (215-316)||(7586533-7586634)
chr7 (122-318)||(16436742-16436931)
chr7 (122-318)||(23956845-23957034)
chr7 (141-318)||(14984659-14984828)
chr7 (141-318)||(15414270-15414439)
chr7 (122-318)||(9566874-9567061)
chr7 (135-319)||(11560506-11560682)
chr7 (144-318)||(14975423-14975589)
chr7 (144-318)||(15404899-15405065)
chr7 (122-318)||(4794588-4794778)
chr7 (214-314)||(14926701-14926800)
chr7 (214-314)||(15350167-15350266)
chr7 (215-311)||(20925110-20925205)
chr7 (215-318)||(10038729-10038832)
chr7 (215-318)||(24902161-24902262)
chr7 (122-318)||(26132917-26133105)
chr7 (122-318)||(29546139-29546321)
chr7 (215-318)||(42636302-42636404)
chr7 (144-213)||(2076496-2076565)
chr7 (144-213)||(2082915-2082984)
chr7 (215-286)||(10658438-10658508)
chr7 (143-318)||(24813914-24814082)
chr7 (218-318)||(10279872-10279971)
chr7 (215-318)||(23082776-23082877)
chr7 (215-318)||(9894068-9894170)
chr7 (43-101)||(11998765-11998823)
chr7 (143-213)||(23174979-23175050)
chr7 (173-317)||(23579956-23580092)
chr7 (269-318)||(23296611-23296660)
chr7 (38-86)||(12325706-12325754)
chr7 (215-318)||(15708226-15708328)
chr7 (143-318)||(26195459-26195626)
chr7 (217-262)||(21260572-21260617)
chr7 (181-213)||(6045348-6045380)
[»] chr5 (29 HSPs)
chr5 (141-318)||(20845796-20845966)
chr5 (123-318)||(13734975-13735164)
chr5 (135-318)||(17920786-17920961)
chr5 (124-318)||(7897917-7898103)
chr5 (134-318)||(20498155-20498332)
chr5 (135-318)||(26183236-26183412)
chr5 (123-318)||(22404763-22404952)
chr5 (123-318)||(24189831-24190020)
chr5 (215-315)||(22246356-22246456)
chr5 (135-318)||(20740939-20741114)
chr5 (215-316)||(22252045-22252146)
chr5 (215-318)||(23420563-23420666)
chr5 (215-318)||(13941999-13942102)
chr5 (122-318)||(30605693-30605882)
chr5 (122-264)||(22130890-22131024)
chr5 (122-318)||(26036778-26036967)
chr5 (123-293)||(25105447-25105611)
chr5 (123-293)||(25164540-25164704)
chr5 (122-318)||(13338560-13338748)
chr5 (133-318)||(26329216-26329394)
chr5 (144-213)||(11204712-11204781)
chr5 (215-318)||(20714738-20714841)
chr5 (217-318)||(22184600-22184700)
chr5 (215-318)||(18221165-18221267)
chr5 (215-314)||(23623932-23624030)
chr5 (141-213)||(17661510-17661583)
chr5 (290-318)||(22130851-22130879)
chr5 (29-101)||(22404977-22405049)
chr5 (144-211)||(24394622-24394690)
[»] chr1 (27 HSPs)
chr1 (29-318)||(4245907-4246193)
chr1 (29-316)||(13165269-13165550)
chr1 (138-318)||(33062370-33062543)
chr1 (128-318)||(26972400-26972585)
chr1 (122-318)||(17038216-17038403)
chr1 (123-318)||(14745784-14745972)
chr1 (122-318)||(11667864-11668053)
chr1 (135-318)||(45599331-45599506)
chr1 (164-318)||(17012013-17012160)
chr1 (135-318)||(52436821-52436997)
chr1 (135-318)||(40313225-40313400)
chr1 (122-318)||(17851374-17851563)
chr1 (122-318)||(20841266-20841455)
chr1 (145-318)||(17379624-17379790)
chr1 (122-318)||(1973281-1973470)
chr1 (215-318)||(47941341-47941443)
chr1 (215-318)||(12753116-12753218)
chr1 (40-102)||(9452023-9452085)
chr1 (122-214)||(20859640-20859733)
chr1 (215-318)||(51472094-51472196)
chr1 (173-318)||(23477936-23478073)
chr1 (218-318)||(17355832-17355931)
chr1 (135-213)||(15804209-15804288)
chr1 (143-199)||(49086704-49086761)
chr1 (38-101)||(14745997-14746060)
chr1 (256-318)||(10340159-10340221)
chr1 (240-318)||(18390106-18390184)
[»] chr2 (20 HSPs)
chr2 (123-318)||(36398796-36398985)
chr2 (34-318)||(23758502-23758783)
chr2 (123-318)||(24790160-24790349)
chr2 (135-318)||(29565994-29566168)
chr2 (137-318)||(18765659-18765833)
chr2 (29-318)||(12910361-12910647)
chr2 (123-318)||(22610861-22611050)
chr2 (179-318)||(26860298-26860430)
chr2 (138-318)||(13314968-13315141)
chr2 (144-271)||(15328299-15328419)
chr2 (173-318)||(19466525-19466662)
chr2 (215-318)||(24317191-24317293)
chr2 (240-318)||(20476579-20476657)
chr2 (217-318)||(21250200-21250299)
chr2 (215-316)||(31587530-31587630)
chr2 (215-314)||(27107565-27107663)
chr2 (240-318)||(20475278-20475356)
chr2 (179-317)||(24317813-24317943)
chr2 (215-318)||(27111134-27111236)
chr2 (215-261)||(21530440-21530486)
[»] scaffold0008 (1 HSPs)
scaffold0008 (122-318)||(40303-40492)
[»] scaffold0143 (1 HSPs)
scaffold0143 (135-318)||(36279-36454)
[»] chr8 (35 HSPs)
chr8 (135-318)||(33466162-33466337)
chr8 (135-318)||(17279870-17280045)
chr8 (215-314)||(22476285-22476384)
chr8 (29-318)||(23541412-23541699)
chr8 (122-318)||(24091925-24092114)
chr8 (218-317)||(25240463-25240562)
chr8 (141-318)||(37155527-37155697)
chr8 (135-318)||(17880741-17880917)
chr8 (34-318)||(11221274-11221549)
chr8 (135-318)||(39080947-39081122)
chr8 (215-318)||(22485188-22485291)
chr8 (162-318)||(8726853-8727001)
chr8 (143-318)||(23864469-23864637)
chr8 (122-318)||(33977026-33977215)
chr8 (215-314)||(12814598-12814696)
chr8 (142-318)||(20254877-20255054)
chr8 (215-318)||(13660374-13660475)
chr8 (215-318)||(13719017-13719118)
chr8 (29-100)||(22472654-22472725)
chr8 (215-300)||(22874233-22874317)
chr8 (221-314)||(45136176-45136268)
chr8 (141-318)||(23249722-23249892)
chr8 (215-318)||(9996554-9996656)
chr8 (29-95)||(22480934-22481000)
chr8 (43-213)||(45133550-45133724)
chr8 (215-318)||(27925448-27925550)
chr8 (142-318)||(1683966-1684132)
chr8 (174-302)||(24384582-24384702)
chr8 (29-102)||(24091844-24091917)
chr8 (122-213)||(33961729-33961821)
chr8 (43-102)||(27925637-27925696)
chr8 (123-160)||(27925576-27925613)
chr8 (29-102)||(33976930-33977003)
chr8 (173-213)||(1562466-1562506)
chr8 (123-163)||(22485112-22485152)
[»] scaffold0190 (1 HSPs)
scaffold0190 (122-316)||(16628-16816)
[»] scaffold0006 (1 HSPs)
scaffold0006 (123-318)||(87704-87893)
[»] scaffold0102 (1 HSPs)
scaffold0102 (123-318)||(36975-37163)
[»] scaffold0328 (1 HSPs)
scaffold0328 (138-318)||(16974-17147)
[»] scaffold0037 (2 HSPs)
scaffold0037 (215-314)||(110262-110361)
scaffold0037 (29-102)||(110472-110545)
[»] scaffold0103 (1 HSPs)
scaffold0103 (29-318)||(25675-25961)
[»] scaffold0059 (3 HSPs)
scaffold0059 (123-318)||(61475-61663)
scaffold0059 (123-281)||(50130-50282)
scaffold0059 (29-102)||(50307-50380)
[»] scaffold0259 (1 HSPs)
scaffold0259 (38-318)||(17280-17556)
[»] scaffold0064 (1 HSPs)
scaffold0064 (135-318)||(52929-53102)
[»] scaffold0185 (1 HSPs)
scaffold0185 (123-318)||(2360-2549)
[»] scaffold0088 (1 HSPs)
scaffold0088 (215-318)||(36647-36750)
[»] scaffold0226 (3 HSPs)
scaffold0226 (29-318)||(7542-7827)
scaffold0226 (122-318)||(18129-18318)
scaffold0226 (122-318)||(27523-27712)
[»] scaffold0032 (1 HSPs)
scaffold0032 (138-318)||(103090-103262)
[»] scaffold0003 (1 HSPs)
scaffold0003 (122-318)||(26372-26561)
[»] scaffold0035 (1 HSPs)
scaffold0035 (215-314)||(37420-37520)
[»] scaffold0333 (1 HSPs)
scaffold0333 (218-274)||(5703-5759)
[»] scaffold0520 (1 HSPs)
scaffold0520 (215-318)||(5473-5575)
[»] scaffold0020 (1 HSPs)
scaffold0020 (277-318)||(12512-12553)
[»] scaffold0072 (1 HSPs)
scaffold0072 (144-211)||(18540-18607)
[»] scaffold0022 (1 HSPs)
scaffold0022 (215-314)||(3177-3273)


Alignment Details
Target: chr6 (Bit Score: 142; Significance: 2e-74; HSPs: 51)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 314
Target Start/End: Original strand, 20558174 - 20558455
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             |||||||   |||    
T  20558174 aatatgttatgtatgatgttttaacgtttgcgatgttacgttcaatgttccaacatcacgcgataaacagaaataaaaacaagaaaataaatgacaagaa 20558273  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagt 225  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||| | ||| || ||||||||||||||| ||||||||||||       ||||     
T  20558274 agtaaagaacacagtgagtttgttaacccagttcggtgcaacgtcacctagtctggaggctaccaagccaggaaggaaatccactagt-------gtagc 20558366  T
Q  226 ccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||| ||| |||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||  |||||||||||    
T  20558367 ccttattctaaaactctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaagaactcctagat 20558455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 29 - 314
Target Start/End: Complemental strand, 9281996 - 9281714
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatgaga---a 125  Q
    |||||||| ||||||||||||||| |||| | |||||| ||||||||||||||||||| |||||||||||||||             |||| || |   |    
T  9281996 aatacgttatgtatgatgttttaaagttttcaatgttaagttcaatgttccaacatcaagcgataaacagaaataaaaacaattaaataaaagacagaaa 9281897  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||| ||||||| |||||||||| |   ||||||||| |||   || ||||| |||||| ||||||||| ||||| ||||||||||||       ||||    
T  9281896 agtaatgaacacaatgagtttgttgatctagttcggtgacaaacacacctactctgggggctaccaagcctggaaggaaatccactagt-------gtag 9281804  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||    
T  9281803 tccttattcaatagctctcagcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagat 9281714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 17855066 - 17855352
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    ||||||||||||||||||||||||  |||||||||||| | | |||||| ||||||||| ||||||| |||| |             |||| ||   |||    
T  17855066 aatacgttttgtatgatgttttaatatttgcgatgttacgattaatgtttcaacatcacacgataaatagaattaaaaacaagaaaataaaagacaggaa 17855165  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||||||| || |||||||||| || ||| |||||| |||   || ||||| ||| || || |||||||||||| ||||||||||       ||||||    
T  17855166 agtaaagaacgcaatgagtttgttgacccagatcggtgacaaacacacctactctggaggctatcaagccaggaaggaaatccacta-------gtgtag 17855258  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  17855259 tccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 17855352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 21723513 - 21723410
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||||| |||||||||||    
T  21723513 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatttcaacctaggaactcctagat 21723414  T
Q  315 ctga 318  Q
    ||||    
T  21723413 ctga 21723410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 13195292 - 13195481
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| ||  |||||| || |||   || ||||| | |||| |||||||||| |||| ||||||||||       |||    
T  13195292 gaaagtaaagaacacaatgagtttgttgacctagttcgatgacaaacacacctactctaggggctaccaagccatgaaggaaatccacta-------gtg 13195384  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| ||||||||| |||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  13195385 tagtccttattcaatagctctcagaaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 13195481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 33665762 - 33665951
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| ||  ||||||||| |||   || ||||| |||||| ||| ||||||||||| ||||||||||       |||    
T  33665762 gaaagtaaataacacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaggaaggaaatccacta-------gtg 33665854  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||| |||||| || |||||||| || |||||||||||| || |||||||||||||||    
T  33665855 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacataggacctacccgtatagacttcaaccaaggaactcctagatctga 33665951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 34657341 - 34657153
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||||||||| |||||||||||| ||||||||  |||| ||| |||| | | |||| |||||||||| |||| ||||||||||||       |    
T  34657341 gaaagtaaagaacacagagagtttgttaacccagttcggcacaac-tcacctacatctaggggctaccaagccaagaaggaaatccactagt-------g 34657250  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||| ||| || |||| |||||||||| |||||| ||||||||    
T  34657249 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggaccaacccgtatagatttcaacctaggaactcccagatctga 34657153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 314
Target Start/End: Complemental strand, 15003340 - 15003168
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||||||||| |||||| ||||||||||||| |||| ||||| ||| ||||||||||||| |||| ||||||||||||       ||||||||||||||    
T  15003340 cacagtgagttcgttaacccagttcggtgcaatgtcacctactctggtggataccaagccatgaaggaaatccactagt-------gtagtccttattca 15003248  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    | |||||||||||||||||| |||| |||| ||||||||| |||||||| ||   ||||||||| ||| |||||||||||    
T  15003247 atagctctcagcaaactccttgtttgcactatatgacctaggacctacccgtactgacttcaacataggaactcctagat 15003168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 135 - 312
Target Start/End: Complemental strand, 15007513 - 15007344
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| ||||||| ||||| |||| ||||| ||||| ||||||||||| |||| ||||||||||||       ||||| ||||||||    
T  15007513 cacagtgagtttgttaacccagttcgatgcaaagtcacctactctgggg-ataccaagccatgaaggaaatccactagt-------gtagtacttattca 15007422  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctag 312  Q
    | ||||||||||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||||||    
T  15007421 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtgctgacttcaacctaggaactcctag 15007344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 123 - 315
Target Start/End: Complemental strand, 17528075 - 17527889
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||||||||||||||||| |||||| ||| |||   || ||||||| |||| ||||||||||| |||  |||||||||||       |    
T  17528075 gaaagtaaagaacacagtgagtttgttaacccagttcagtgacaaacacacctactattggggctaccaagccagaaagttaatccactagt-------g 17527983  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatc 315  Q
    |||||||||||||| || ||||||||||||||| ||||||||| ||||||||| ||||||||  | ||||||||||||||| ||||| ||||||    
T  17527982 tagtccttattcaatagttctcagcaaactccttgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcatagatc 17527889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 314
Target Start/End: Original strand, 19215935 - 19216106
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||| ||||||||||||| |||||||||||||||||| ||||| | ||| |||||||||||||||| ||||||||||       ||||||||| ||||||    
T  19215935 cacattgagtttgttaacccagttcggtgcaacgtcacctactctaggg-ataccaagccaggaaggaaatccacta-------gtgtagtccgtattca 19216026  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgt-ctagacttcaacctagaaactcctagat 314  Q
    | ||||||||||||||||||||||| |||| ||||||||| |||||||| || ||| |||||||| ||| |||||||||||    
T  19216027 atagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtacta-acttcaacttaggaactcctagat 19216106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 135 - 308
Target Start/End: Original strand, 9384595 - 9384761
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| ||||||||| |||||||  ||| | ||| || ||||||| ||||||| ||||||||||       ||||||||||||||||    
T  9384595 cacagtgagtttgttaacccagttcggtacaacgtcgcctattctggtggctaccaagtcaggaaggaaatccacta-------gtgtagtccttattca 9384687  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactc 308  Q
    | ||||||||||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||    
T  9384688 atagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactc 9384761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 125 - 318
Target Start/End: Original strand, 15038319 - 15038504
Alignment:
Q  125 aagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||||  ||||||||||||||||||| ||||| |||||||||||| ||||| |||||| ||||||| ||||||| ||||||       ||||||||||    
T  15038319 aagtaaaagacacagtgagtttgttaacccagtttggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatcc-------actagtgtag 15038411  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||| ||||||| ||||||||| ||||||||||||| |||   |||||||| |||| ||| ||   ||||||||||||| |||||||||||||||    
T  15038412 tccgtattcaatagctctcaggaaactcctcgtttgcac-aaatgacctaggaccaacccgtactgacttcaacctagtaactcctagatctga 15038504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 21706454 - 21706355
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| |||||||  ||||||||| |||||||||||    
T  21706454 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagatatcaacctaggaactcctagat 21706355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 123 - 319
Target Start/End: Original strand, 17234560 - 17234750
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || ||||| |||| |||   || ||||| | |||| |||||||||  |||| |||||||| |||       |    
T  17234560 gaaagtaaagaacacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagcccagaaggaaatccaccagt-------g 17234652  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctgat 319  Q
    |||||||||||||| ||||||| |||||||||  ||||||||| ||||||||| |||||||| || ||||||||||||||| ||||||||||||||||    
T  17234653 tagtccttattcaatagctctctgcaaactccctgtttacactatatgacctatgacctacccgtatagacttcaacctaggaactcctagatctgat 17234750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 29 - 315
Target Start/End: Complemental strand, 20990052 - 20989770
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| |||||||||||||| | ||||| |||||  | |||||||||||||||||| ||||||  ||||||             |||||||   |||    
T  20990052 aatatgttctgtatgatgttttagcatttgcaatgttccgatcaatgttccaacatcacacgataagtagaaataaaaacaagaaaataaatgatgggaa 20989953  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||| |||||| |||||||||| || |||||||||| ||    || ||||| |||||| ||||||| ||| ||| ||||||       ||||||||||    
T  20989952 agtaaataacacaatgagtttgttgacccagttcggtgacagacacacctactctgggggctaccaagtcagaaaggaaatcc-------actagtgtag 20989860  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatc 315  Q
    ||||||||| | |||||||||||||||||||||||||| || | |||||| ||||||||||| ||||||| ||||||||||||||||||||    
T  20989859 tccttattctatagctctcagcaaactcctcgtttaca-ttaaagacctatgacctacctgtatagacttgaacctagaaactcctagatc 20989770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 26965675 - 26965572
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||  ||| |||||| |||||||| |||||||||||||||||| |||||||||||    
T  26965675 actagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagat 26965576  T
Q  315 ctga 318  Q
    ||||    
T  26965575 ctga 26965572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 14258782 - 14259068
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||||| |||||||||||||||||||| |||||| | | |||||| |||||||||||||||| |||||||             ||||  |   |||    
T  14258782 aatatgttttttatgatgttttaacgtttgcaatgttacgattaatgtttcaacatcacgcgataagcagaaataaaaacaagaaaataaacaataggaa 14258881  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgc-aacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||||||| |||||||||| || ||||||||||  ||   || ||||| |||||| |||||||| |||||| ||||||||||       ||||||    
T  14258882 agtaaagaacacaatgagtttgttgacccagttcggtgagaaacacacctactttgggggctaccaagcgaggaaggaaatccacta-------gtgtag 14258974  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| |||||||| ||||||  ||||||||| | ||||||||| |||||||| || |||||||| || ||  |||||||||||||||    
T  14258975 tccttattcaatagctctcaacaaacttatcgtttacaatatatgacctaggacctacccgtatagacttccacttatgaactcctagatctga 14259068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 16309527 - 16309360
Alignment:
Q  142 agtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||| |||||| ||||||||||| ||||| |||||| ||||||||||||| |||| |||||||||        ||||||||||||   |||||    
T  16309527 agtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagccaggaggaaa-tccactagta-------tagtccttattctctagctc 16309436  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||||||||| | | |||||| |||||||| |||| ||||||||||||| ||||| |||||||||    
T  16309435 tcagcaaactcctcgtttacac-taaagacctaggacctacccgtcttgacttcaacctaggaactcgtagatctga 16309360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 20470393 - 20470205
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||| | |||||||||| || |||||||| | |||   || ||||| ||| || ||||||||||||||| ||||||||||||       |    
T  20470393 gaaagtaaagaacataatgagtttgttgacccagttcggcgacaatcacacctactctggaggctaccaagccaggaaggaaatccactagt-------g 20470301  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  20470300 tactccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 20470205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 132 - 318
Target Start/End: Complemental strand, 17864606 - 17864427
Alignment:
Q  132 gaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtcctta 230  Q
    ||||||||| |||||||| ||  ||||||||| |||   || ||||| |||||| |||||| |||||||||||||||||||||       ||||||||||    
T  17864606 gaacacagtaagtttgttgacctagttcggtgacaaacacacctactctgggggttaccaatccaggaagaaaatccactagt-------gtagtcctta 17864514  T
Q  231 ttcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||| | ||||||||||||||||||||||||||| | | |  ||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  17864513 ttctatagctctcagcaaactcctcgtttacac-taaagtactaggacctacctgtatagacttcaacctaggaactcctagatctga 17864427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 314
Target Start/End: Original strand, 20003118 - 20003290
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||| ||||||||| ||| |||||||||||||||||| ||||| | |||| ||||||||||||||| ||||| ||||       ||||||| ||||||||    
T  20003118 cacaatgagtttgtgaacccagttcggtgcaacgtcacctactttaggggctaccaagccaggaaggaaatcaacta-------gtgtagttcttattca 20003210  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    | ||||||||| |||| |||||||| |||| ||||||||| |||||||| ||    |||||||||||| |||||||||||    
T  20003211 atagctctcaggaaacccctcgtttgcactatatgacctaggacctacccgtacttacttcaacctaggaactcctagat 20003290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 16137759 - 16137584
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||| ||||||||||||| ||||| | |||||||||| ||||| || ||| ||||||||||||||| ||||||||||||       ||||||||||||||    
T  16137759 cacaatgagtttgttaacccagtttgatgcaacgtcacctactctgagggctaccaagccaggaaggaaatccactagt-------gtagtccttattca 16137667  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| ||  | |||||||| || ||||| ||   ||||||||||||| ||||| || ||||||    
T  16137666 atagctctcagcaaactcctcgtttgca-gtaatgacctaggatctacccgtactgacttcaacctaggaactcataaatctga 16137584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 43 - 311
Target Start/End: Complemental strand, 12039955 - 12039691
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaaagtaaagaacacag 139  Q
    ||||||||||||||||| |||||  |||||||||||||| |||||| |||||||||||||             |||| ||   ||||||||||||||||     
T  12039955 gatgttttaacgtttgcaatgtttcgttcaatgttccaatatcacgagataaacagaaataaaaacaagaaaataaacgacaagaaagtaaagaacacaa 12039856  T
Q  140 tgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaag 238  Q
    |||||||||| ||  ||||||||| | |   || ||||| |||||| |||||||| |||||| |||||       | |||||||||||||||||| | ||    
T  12039855 tgagtttgttgacctagttcggtgacgaacacacctactttgggggctaccaagctaggaaggaaatc-------ttctagtgtagtccttattctatag 12039763  T
Q  239 ctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactccta 311  Q
    |||||| |||||||||||||||||| | | |||||| |||||||  || ||||||||||||||| ||||||||    
T  12039762 ctctcaacaaactcctcgtttacac-taaagacctaggacctactcgtatagacttcaacctaggaactccta 12039691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 19171470 - 19171573
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| | ||||||||||| |||| | ||| ||| ||||||||| |||||||| || ||||||||||||||  |||||||||||    
T  19171470 actagtgtagtccttattcaataactctcagcaaagtccttgcttatactatatgacctaggacctacccgtatagacttcaacctatgaactcctagat 19171569  T
Q  315 ctga 318  Q
    ||||    
T  19171570 ctga 19171573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 25964749 - 25964852
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||| ||||||||||||| | ||| || || |||||| ||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  25964749 actagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 25964848  T
Q  315 ctga 318  Q
    ||||    
T  25964849 ctga 25964852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 25969396 - 25969499
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||| ||||||||||||| | ||| || || |||||| ||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  25969396 actagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 25969495  T
Q  315 ctga 318  Q
    ||||    
T  25969496 ctga 25969499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 25973836 - 25973939
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||| ||||||||||||| | ||| || || |||||| ||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  25973836 actagggtagtccttattctatagcccttagaaaactcatcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 25973935  T
Q  315 ctga 318  Q
    ||||    
T  25973936 ctga 25973939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 25805422 - 25805610
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| ||| ||||||||  ||| |||||| |||   || ||||| | | || ||||||||||||||| ||||||||||       |||    
T  25805422 gaaagtaaagaacacaatgattttgttaaaccagatcggtgacaaacacacctactctagaggctaccaagccaggaaggaaatccacta-------gtg 25805514  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||  | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  25805515 tagtccttattatatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 25805610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 24501879 - 24501979
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||||| | | |||||| |||||||| || | || ||||||||||||||||||||||    
T  24501879 actagtgtagtccttattctatagctctcagcaaactcctcatttacac-taaagacctaggacctacccgtattgatttcaacctagaaactcctagat 24501977  T
Q  315 ct 316  Q
    ||    
T  24501978 ct 24501979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 228 - 319
Target Start/End: Original strand, 11960550 - 11960641
Alignment:
Q  228 ttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctgat 319  Q
    |||||| |||| |||||||||||||||||||||||  | | |||||| |||||||| |||||||||||||||||| |||||||| |||||||    
T  11960550 ttattctaaagttctcagcaaactcctcgtttacaactgaagacctaggacctacccgtctagacttcaacctaggaactcctacatctgat 11960641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 123 - 319
Target Start/End: Complemental strand, 23882884 - 23882695
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||  ||||||| ||||||||||||       |    
T  23882884 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaaatcaggaaggaaatccactagt-------g 23882792  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctgat 319  Q
    ||||| |||||| | ||||| |||||||||| | |||||||||  | |||||| ||||||||||| | || |||||||||  ||||||||||||||||    
T  23882791 tagtctttattctatagctcccagcaaactctttgtttacactaaa-gacctaggacctacctgtattgatttcaacctatgaactcctagatctgat 23882695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 29255106 - 29254918
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||| ||||||||||| || |||||| ||| |||   || ||||| | |||  || |||||||||||||||||||||||||           
T  29255106 agaaagtaaagaacacggtgagtttgttgacccagttcagtggcaaacacacctactctagggc-tatcaagccaggaagaaaatccactagt------- 29255015  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||| ||  |||||||||||||||    
T  29255014 gtagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacttatgaactcctagatctga 29254918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 28623583 - 28623681
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||||||| |||||| || |||||||||| ||| |||||| |||||||| || | || |||||||||| |||||||||||    
T  28623583 actagtgtagtccttattctaaagctctgagcaaaatcttcgtttacac-ttaagacctaggacctacccgtattgatttcaacctaggaactcctagat 28623681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 29 - 262
Target Start/End: Complemental strand, 15897961 - 15897731
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatg---agaa 125  Q
    |||| ||| |||| ||||||||||||| ||| ||||| ||||||| ||| |||||||||||||||||||||| |             |||| |   ||||    
T  15897961 aatatgttatgtacgatgttttaacgtatgcaatgttttgttcaaggtttcaacatcacgcgataaacagaagtaaaaataagaaaataaaagacaagaa 15897862  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||||| | |||||||||| || |||||||||| |||   || ||||| |||||| |||||||| |||||| ||||||       ||||||||||    
T  15897861 agtaaagaacaaaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagctaggaaggaaatcc-------actagtgtag 15897769  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttaca 262  Q
    ||||||||| | |||||| |||||||||||| ||||||    
T  15897768 tccttattctatagctcttagcaaactcctcatttaca 15897731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 3567526 - 3567426
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||| ||||||| ||||||||||||||| ||||||||||||| ||| |||||| |||||||| || | || |||||||||  |||| ||||||    
T  3567526 actagtgtagttcttattctaaagctctcagcaaaatcctcgtttacac-ttaagacctaggacctacccgtattgatttcaacctaagaacttctagat 3567428  T
Q  315 ct 316  Q
    ||    
T  3567427 ct 3567426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 12444824 - 12444728
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||| |||||||||||||||||||||  || ||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||    
T  12444824 actagtgtagtccgtattcaaaagctctcagcaaa--ccacgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagat 12444728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 216 - 318
Target Start/End: Complemental strand, 8465775 - 8465674
Alignment:
Q  216 ctagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatc 315  Q
    ||||||||||||||| || | |||||||||||||||||   ||||||||  | |||||| |||||||| || |||||||||| || | ||||||||||||    
T  8465775 ctagtgtagtccttactctatagctctcagcaaactccaaatttacactaaa-gacctaggacctacccgtatagacttcaatcttggaactcctagatc 8465677  T
Q  316 tga 318  Q
    |||    
T  8465676 tga 8465674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 8465944 - 8465882
Alignment:
Q  40 tatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||||||||||||||| |||||  |||||||||||||||||||||  |||||| |||||    
T  8465944 tatgatgttttaacgtttgcaatgttccgttcaatgttccaacatcacgaaataaactgaaat 8465882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 218 - 316
Target Start/End: Complemental strand, 19894722 - 19894625
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||||||| |||||||| |||| |||| ||||||| | ||||||||| ||||||||  | ||||||||||| |   |||||||||||||    
T  19894722 agtgtagtccttattcaatagctctcatcaaattccttgtttacattatatgacctaggacctacc-ctatagacttcaacttctgaactcctagatct 19894625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 283
Target Start/End: Complemental strand, 13870470 - 13870402
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacc 283  Q
    ||||||||||||||||||||| |||||||| ||| ||| | ||||||||| ||||||| | ||||||||    
T  13870470 actagtgtagtccttattcaatagctctcatcaagctcattgtttacactatatgaccgaggacctacc 13870402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 21717818 - 21717759
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||||| |||||| |||||  ||| ||||||||||||||||| |||||||||||||    
T  21717818 gatgttttaatgtttgcaatgttccgtttaatgttccaacatcacgtgataaacagaaat 21717759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 21725654 - 21725595
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||||| |||||| |||||  ||| ||||||||||||||||| |||||||||||||    
T  21725654 gatgttttaatgtttgcaatgttccgtttaatgttccaacatcacgtgataaacagaaat 21725595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 136 - 213
Target Start/End: Original strand, 25782793 - 25782871
Alignment:
Q  136 acagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||||||||||||||| |||||||||| |||   || ||||| ||| || ||||||||||| ||| ||||||||||||    
T  25782793 acagtgagtttgttaacccagttcggtgacaaacacacctactctggaggctaccaagccagtaaggaaatccactagt 25782871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 13195195 - 13195268
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||| |||| ||||||||||||| ||||||| ||||||   | |||||| ||||||||||| ||||||| ||||    
T  13195195 aatatgtttggtatgatgttttagcgtttgcaatgttacaattaatgtttcaacatcacgcaataaacataaat 13195268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 17870009 - 17869968
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg 163  Q
    ||||||||||| |||||||||||||||| || ||||||||||    
T  17870009 agaaagtaaaggacacagtgagtttgttgacccagttcggtg 17869968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 17879761 - 17879720
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg 163  Q
    ||||||||||| |||||||||||||||| || ||||||||||    
T  17879761 agaaagtaaaggacacagtgagtttgttgacccagttcggtg 17879720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 25948400 - 25948473
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    ||||| || |||||| ||||| | ||||||| ||| || | | |||||| ||||||||||||||||||||||||    
T  25948400 aatacattatgtatgttgtttcagcgtttgcaatgatacgattaatgtttcaacatcacgcgataaacagaaat 25948473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 41 - 97
Target Start/End: Complemental strand, 13870571 - 13870515
Alignment:
Q  41 atgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaaca 97  Q
    ||||||||| | ||||||| |||||| | | |||||| |||||||||||||||||||    
T  13870571 atgatgtttcagcgtttgcaatgttacgattaatgtttcaacatcacgcgataaaca 13870515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Complemental strand, 21706540 - 21706500
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg 163  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  21706540 gaaagtaaagaacacaatgagtttgttaacccagtttggtg 21706500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 25948497 - 25948537
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg 163  Q
    |||||||||||||||| |||||||||| || ||||||||||    
T  25948497 gaaagtaaagaacacaatgagtttgttgacccagttcggtg 25948537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 142; Significance: 2e-74; HSPs: 39)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 21477980 - 21478265
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| ||||||||||||||| ||||| ||||| |  |||||||||||||||||||||||||| |||||||             |||||||   |||    
T  21477980 aatacgttctgtatgatgttttaatgtttgtgatgtcacattcaatgttccaacatcacgcgataaccagaaataaaaacaagaaaataaatgacaagaa 21478079  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagt 225  Q
    |||||||||||| |||||||||||||| |||||||||||||||||| ||||| ||| || ||||||||||||||| |||| |||||       |||||||    
T  21478080 agtaaagaacacggtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatacacta-------gtgtagt 21478172  T
Q  226 ccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  21478173 ccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 21478265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 8163654 - 8163942
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| ||||||||||||||||||||  ||||||| |||||||||||||||||||||||||||||| ||||             |||||||   |||    
T  8163654 aatacgttatgtatgatgttttaacgtttatgatgttacgttcaatgttccaacatcacgcgataaacaaaaataaaaacaagaaaataaatgacaagaa 8163753  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatggggg----ataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||||||||||||||||||| |||||||||||||||||| ||||| | |||     |  ||||||||||||| |||| |||||||       |    
T  8163754 agtaaagaacacagtgagtttgttaacccagttcggtgcaacgtcacctactctagggctaccaagccaagccaggaaggaaattcactagt-------g 8163846  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     ||||||||||||||||||| ||||||||||||||||||| |||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  8163847 cagtccttattcaaaagctcccagcaaactcctcgtttac-ctttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 8163942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 19659493 - 19659596
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||| |||||||||||    
T  19659493 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacatgtttagacttcaacctaggaactcctagat 19659592  T
Q  315 ctga 318  Q
    ||||    
T  19659593 ctga 19659596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 25116792 - 25116983
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggatac--caagccaggaagaaaatccactagttactag 219  Q
    |||||||||||||||| ||||||| || || |||||||||| |||   || ||||| |||||| |||  |||||||||||| ||||||||||       |    
T  25116792 gaaagtaaagaacacaatgagtttattgacccagttcggtgacaaacacacctactctgggggctacaccaagccaggaaggaaatccacta-------g 25116884  T
Q  220 tgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||| ||||||||||||||| |||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  25116885 tgtagtccttattcaatagctctcagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 25116983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 215 - 319
Target Start/End: Complemental strand, 23400299 - 23400195
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  23400299 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 23400200  T
Q  315 ctgat 319  Q
    |||||    
T  23400199 ctgat 23400195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 10190855 - 10191044
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||| ||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| |||||||| |||       |    
T  10190855 gaaagtaaagaaaacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaccagt-------g 10190947  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||| ||||||||||||||||||||| |||||| || ||| |||  || |||||||||||||||||||||||||||||||    
T  10190948 tagtccttattcaatagctctaagcaaactcctcgtttacactatatgacataggacttactcgtatagacttcaacctagaaactcctagatctga 10191044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 136 - 318
Target Start/End: Complemental strand, 13399481 - 13399306
Alignment:
Q  136 acagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||| || |||||||||| |||   || ||||| | |||| ||||||||||||||||||||||||||||       |||||||||||||     
T  13399481 acagtgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagccaggaagaaaatccactagt-------gtagtccttattct 13399389  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||| ||| ||| || |||||||| ||||||| |||||||||| |||||||||||||||    
T  13399388 aaagctctcagcaaactcctcgtttacac-ttaagacttaggacctacccgtctagatttcaacctaggaactcctagatctga 13399306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 124 - 314
Target Start/End: Complemental strand, 25354824 - 25354642
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||       |||||||    
T  25354824 aaagtaaatgacacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccac-------tagtgta 25354732  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    || | ||||||| | |||||||||||||||| |||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||    
T  25354731 gttcgtattcaatatctctcagcaaactccttgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagat 25354642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 134 - 318
Target Start/End: Original strand, 22554950 - 22555128
Alignment:
Q  134 acacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattc 233  Q
    ||||||||||||||||||| |||||||||||||||||| ||||| ||  || ||||||||||||||| ||||||       |||||||||||||||||||    
T  22554950 acacagtgagtttgttaacccagttcggtgcaacgtcacctactctgaaggctaccaagccaggaaggaaatcc-------actagtgtagtccttattc 22555042  T
Q  234 aaaagctctcagcaaactcctcgtttacactttat-gacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||||||||||||||||||||| | |||| ||| |||||| |||||| | ||   ||||||||||||| ||||| |||||||||    
T  22555043 aatagctctcagcaaactcctcgtatgcactatatggacctaggacctatccgtactgacttcaacctaggaactcgtagatctga 22555128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 307
Target Start/End: Complemental strand, 46741927 - 46741763
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||| ||||||||||||| || ||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||||       ||| ||||||||||    
T  46741927 cacaatgagtttgttaacccatttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt-------gtaatccttattca 46741835  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaact 307  Q
    | ||||||||||||||||||||||| ||| |||||||||| |||||||| || | ||||||||||||| ||||    
T  46741834 atagctctcagcaaactcctcgtttgcac-ttatgacctaggacctacccgtattgacttcaacctaggaact 46741763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 123 - 312
Target Start/End: Complemental strand, 33899179 - 33898996
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || ||||| | |||| ||||||| ||||||||||||||||| ||       |    
T  33899179 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaagaaaatccactggt-------g 33899087  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctag 312  Q
    ||||||| |||||| |||||| |||||||| |||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||    
T  33899086 tagtcctcattcaatagctcttagcaaacttctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctag 33898996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 11905064 - 11905248
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgt 222  Q
    |||||||||  | ||||||||||||||||| |||||||||||||||||| ||||| |||||  ||||||| ||||||| ||||||||||||       |     
T  11905064 gaaagtaaatgatacagtgagtttgttaacccagttcggtgcaacgtcacctactttggggt-taccaagtcaggaaggaaatccactagt-------gc 11905155  T
Q  223 agtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    ||||||||||||| ||||||||| ||||| ||||||||||| | | |||||| ||| ||||||| | ||||||||||||| |||||||||||||    
T  11905156 agtccttattcaatagctctcagtaaacttctcgtttacac-taaagacctatgacttacctgtattgacttcaacctaggaactcctagatct 11905248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 123 - 311
Target Start/End: Original strand, 28019273 - 28019455
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| || |||||||||| |||   ||  | || |||||| |||||||||| |||| ||||||||||       |||    
T  28019273 gaaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacatgctctgggggctaccaagccaagaaggaaatccacta-------gtg 28019365  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactccta 311  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |||| || ||||||||||||||| ||||||||    
T  28019366 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacatacccgtatagacttcaacctaggaactccta 28019455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 10722037 - 10722140
Alignment:
Q  214 tactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||| ||||||||||    
T  10722037 tactagtgtagtccttattctaaagctctcaacaaactcctcgtttacac-ttaagacctaggacctacccgtatagacttcaacctaggaactcctaga 10722135  T
Q  314 tctga 318  Q
    |||||    
T  10722136 tctga 10722140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 214 - 318
Target Start/End: Original strand, 10935806 - 10935909
Alignment:
Q  214 tactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    |||||||||||||||||||| |||||||||| |||||||||||||||||| ||| |||||| |||||||| || ||||||||||||||| ||||||||||    
T  10935806 tactagtgtagtccttattctaaagctctcaacaaactcctcgtttacac-ttaagacctaggacctacccgtatagacttcaacctaggaactcctaga 10935904  T
Q  314 tctga 318  Q
    |||||    
T  10935905 tctga 10935909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 173 - 318
Target Start/End: Complemental strand, 18618256 - 18618118
Alignment:
Q  173 ctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacc 272  Q
    ||||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||||| | |||||| ||||||||||||||||||| |||||||    
T  18618256 ctactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattcaatatctctcaacaaactcctcgtttacactatatgacc 18618164  T
Q  273 taagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||| |||| ||||||||||||||||||  ||| ||||||||||    
T  18618163 taggacatacccgtctagacttcaacctagggactactagatctga 18618118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 135 - 264
Target Start/End: Original strand, 23541225 - 23541347
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| || ||||||||||||||| ||||||       ||||||||||||| ||||||    
T  23541225 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatcc-------actagtgtagtccgtattca 23541317  T
Q  235 aaagctctcagcaaactcctcgtttacact 264  Q
    | ||||||||||||||||||||||| ||||    
T  23541318 atagctctcagcaaactcctcgtttgcact 23541347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 10724131 - 10724416
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| |||||||| ||||||||| ||||||  |||||  ||||||||||||||||||||   ||||||||||||             |||||||   |||    
T  10724131 aatatgttttgtaagatgttttaccgtttggaatgttccgttcaatgttccaacatcacaaaataaacagaaataaaaacaagaaaataaatgacaagaa 10724230  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    | ||||||| |||||||||||||| ||  ||||||||| |||   || ||||| |||||| ||| ||||||||||| |||| |||||       ||||||    
T  10724231 attaaagaatacagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcacta-------gtgtag 10724323  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||| | ||||||||||||||||||| |||||| || | ||||||| ||||||| || ||||||||||||||| |||||||||||||||    
T  10724324 tccttattctatagctctcagcaaactcctcatttaca-ttaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctga 10724416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 10937900 - 10938185
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| |||||||| ||||||||| ||||||  |||||  ||||||||||||||||||||   ||||||||||||             |||||||   |||    
T  10937900 aatatgttttgtaagatgttttaccgtttggaatgttccgttcaatgttccaacatcacaaaataaacagaaataaaaacaagaaaataaatgacaagaa 10937999  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    | ||||||| |||||||||||||| ||  ||||||||| |||   || ||||| |||||| ||| ||||||||||| |||| |||||       ||||||    
T  10938000 attaaagaatacagtgagtttgttgacctagttcggtgacaaacacacctactttgggggctacaaagccaggaaggaaattcacta-------gtgtag 10938092  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||| | ||||||||||||||||||| |||||| || | ||||||| ||||||| || ||||||||||||||| |||||||||||||||    
T  10938093 tccttattctatagctctcagcaaactcctcatttaca-ttaaagacctaaaacctacccgtatagacttcaacctaggaactcctagatctga 10938185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 134 - 316
Target Start/End: Complemental strand, 11325324 - 11325149
Alignment:
Q  134 acacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattc 233  Q
    |||||||||| |||||||| |  ||| ||||||||||| || || ||| || ||||||||||||||| ||||||||||||       |||||||||||||    
T  11325324 acacagtgagattgttaacccgattccgtgcaacgtcacctgctctggaggctaccaagccaggaaggaaatccactagt-------gtagtccttattc 11325232  T
Q  234 aaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgt-ctagacttcaacctagaaactcctagatct 316  Q
    || |||||||| |||||||||||||| |||| ||||||||| |||||||| || ||| |||||||||||| ||||| |||||||    
T  11325231 aatagctctcaacaaactcctcgtttgcactatatgacctaggacctacccgtacta-acttcaacctaggaactcgtagatct 11325149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 24143116 - 24143291
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| ||||||||||||  ||||||||||||||||| ||||| |||||| ||||||| ||||||| ||||||       ||||||||||||| ||||||    
T  24143116 cacagagagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatcc-------actagtgtagtccgtattca 24143208  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||| ||||||||| ||| | |||||||| |||||||| ||   ||||| ||||||  |||||||||||||||    
T  24143209 atagctctcagcaaaatcctcgtttgcac-taatgacctaggacctacccgtactgactttaacctatgaactcctagatctga 24143291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 16383859 - 16384046
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||| ||||||||||| |||| ||||| ||  ||||||||| |||   || ||||| |||||| | ||||||||||||| ||||||||||       |||    
T  16383859 gaaattaaagaacacaatgagattgttgacctagttcggtgacaaacacacctactctgggggcttccaagccaggaaggaaatccacta-------gtg 16383951  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||| |||||||| ||||||||||||||||||| ||||||||| |||||||| || |  |||||||||||  |||||||||||||    
T  16383952 tagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctaggacctacccgtattaacttcaacctatgaactcctagatct 16384046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 15700503 - 15700315
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactat-gggggataccaagccaggaagaaaatccactagttactag 219  Q
    |||||||||||||||||||||||||||| || |||||||||| |||   || ||||| | ||||| ||||||||||||||| ||||||||||||          
T  15700503 agaaagtaaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactcttgggggctaccaagccaggaaggaaatccactagt------ 15700410  T
Q  220 tgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
     ||||||||||||| | |||| |||||||||||||||||||||| | | |||||| ||||||||  | | || |||||||||| |||||||||||||    
T  15700409 -gtagtccttattctatagctttcagcaaactcctcgtttacac-taaagacctaggacctacccatattgatttcaacctaggaactcctagatct 15700315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 19894981 - 19894806
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||||||||||||||||  |||||||||||||||||  |||| | || | ||||||||||||||  ||||||||||||       ||||| | ||||||    
T  19894981 cacagtgagtttgttaacctagttcggtgcaacgtcacatactctaggagctaccaagccaggaacgaaatccactagt-------gtagttcgtattca 19894889  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||||||||||||||||||||||  || | |||||||| |||||||| ||   |||||||||||||||||||||| ||||||    
T  19894888 atagctctcagcaaactcctcgtttgaac-taatgacctaggacctacccgtactgacttcaacctagaaactcctaaatctga 19894806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 32861702 - 32861801
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| ||||| ||||||||||||||| |  ||| |||||| |||||||  |||||||||||||||||| |||||||||||    
T  32861702 actagtgtagtccttattctaaagttctcaacaaactcctcgtttataacttaagacctaggacctactcgtctagacttcaacctaggaactcctagat 32861801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 143 - 318
Target Start/End: Original strand, 50907840 - 50908008
Alignment:
Q  143 gtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||||||||||||| |||   || ||||| || ||| ||||||| ||||||||||||||||||||       ||||||||||||| || | |     
T  50907840 gtttgttaactcagttcggtgacaaacacacctactctgagggctaccaagtcaggaagaaaatccactagt-------gtagtccttattctaa-gtta 50907931  T
Q  242 tcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||| || || |||||| |||||||| || | ||||||||||||| |||||||| ||||||    
T  50907932 tcagcaaactcctcgtttacaactcta-gacctaggacctacccgtattgacttcaacctaggaactcctaaatctga 50908008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 9069000 - 9069102
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |  |||||||||||||||||||||||||| | | || ||| |||||||| || | || ||||| |||| |||||||||||    
T  9069000 actagtgtagtccttattctattgctctcagcaaactcctcgtttacac-taaagatctaggacctacccgtattgatttcaatctaggaactcctagat 9069098  T
Q  315 ctga 318  Q
    ||||    
T  9069099 ctga 9069102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 10198352 - 10198253
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||||| || | ||||||||||||||  ||||||| || || |||||| |||||||| |||| ||||||||||||| |||||||||||||    
T  10198352 agtgtagtccttattctaa-gttctcagcaaactccaagtttacaactcta-gacctaggacctacccgtcttgacttcaacctaggaactcctagatct 10198255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 11865283 - 11865215
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccacta 211  Q
    ||||||||| ||||||||||||||||| ||||| | |||||| |||||||||||||||||||| |||||    
T  11865283 tttgttaacccagttcggtgcaacgtcttctacgtctgggggctaccaagccaggaagaaaattcacta 11865215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 33745951 - 33746120
Alignment:
Q  142 agtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    ||||||||||| |||||||||| |||   || ||||||||| || |||||||| |||||| ||||||||||       ||||||||||||||  | ||||    
T  33745951 agtttgttaacacagttcggtgacaaaaacacctactatggaggctaccaagctaggaaggaaatccacta-------gtgtagtccttattttatagct 33746043  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||| ||| ||||||||||||| | | |||||| |||||||| || |  | |||||||||| |||| ||||||||||    
T  33746044 ctcagtaaattcctcgtttacac-taaagacctaggacctacccgtattaatttcaacctaggaacttctagatctga 33746120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 33899470 - 33899398
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaa 101  Q
    |||| ||| |||||||||||| | ||||||| |||||||| | ||||||  ||||||||||||||||||||||    
T  33899470 aataggttctgtatgatgtttcagcgtttgcaatgttatgattaatgttttaacatcacgcgataaacagaaa 33899398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 16655443 - 16655341
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttac-actttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||| ||||||||||||| || | |||||||||||||||   |||| |||||| |||||| ||||||||  ||| || |||||||||| ||||||||||    
T  16655443 actagggtagtccttattctaa-gttctcagcaaactccttagttacgacttta-gacctaggacctacccatcttgagttcaacctaggaactcctaga 16655346  T
Q  314 tctga 318  Q
    |||||    
T  16655345 tctga 16655341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 310
Target Start/End: Complemental strand, 15162592 - 15162498
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcct 310  Q
    ||||||||||||||||||| | | |||||| ||||||| |||||||||||  | |||| |  ||||||| || || |||||||||||| |||||||    
T  15162592 actagtgtagtccttattctataactctcaacaaactcttcgtttacactaaa-gaccgagaacctacccgtataaacttcaacctaggaactcct 15162498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 19183785 - 19183683
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||| ||  ||||| | |||||||| |||||| || |||||||||  | |||||| |||| | | ||||||| |||||||||| |||||||||||    
T  19183785 actagtgtattctgtattctatagctctcaacaaacttcttgtttacactaaa-gacctaggacccatccgtctagatttcaacctaggaactcctagat 19183687  T
Q  315 ctga 318  Q
    ||||    
T  19183686 ctga 19183683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 122 - 211
Target Start/End: Original strand, 13268814 - 13268904
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccacta 211  Q
    |||||||||| | |||||   ||||||| || |||||||||||||| ||| |||| | |||||| ||||||| ||||||| ||||||||||    
T  13268814 agaaagtaaatagcacaggttgtttgttcacccagttcggtgcaacttcacctacatctgggggctaccaagtcaggaaggaaatccacta 13268904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 33737973 - 33738043
Alignment:
Q  144 tttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||||||| |||||||||| |||   || ||||||||| || ||||||||||||||| ||||||||||||    
T  33737973 tttgttaacccagttcggtgacaaacacacctactatggaggctaccaagccaggaaggaaatccactagt 33738043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 212
Target Start/End: Complemental strand, 11289507 - 11289438
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactag 212  Q
    |||||||||| |||||||||||||||||| | ||    |||| || ||||||||||||||||| ||||||    
T  11289507 gtttgttaacccagttcggtgcaacgtcaccaacgtctggggttaacaagccaggaagaaaattcactag 11289438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 25116695 - 25116768
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||| ||||| |||||| | | ||| | |||||| | | |||||| ||||||||||||||||||||||||    
T  25116695 aatacgttctgtataatgtttcagcatttacaatgttacgattaatgtttcaacatcacgcgataaacagaaat 25116768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 34 - 102
Target Start/End: Complemental strand, 15700579 - 15700511
Alignment:
Q  34 gttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||| ||||||| || ||||   ||||| ||||||||||||||||||||||   |||||||||||    
T  15700579 gttttgtaagatgtttcaatgtttataatgttttgttcaatgttccaacatcacgaattaaacagaaat 15700511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 142; Significance: 2e-74; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 20748449 - 20748165
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||             |||||||   |||    
T  20748449 aatatgttttgtatgatgttttaacgtttgcgatgttacgttcaatgttccaacatcacgcgataaacagaaataaaaacaagaaaataaatgacaagaa 20748350  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagt 225  Q
    ||||||||||| | ||||||||||||| |||||||||||||| ||| ||||| |||||  ||||||||||||||| ||||||||||||       |||||    
T  20748349 agtaaagaacataatgagtttgttaacccagttcggtgcaacatcacctactttggggc-taccaagccaggaaggaaatccactagt-------gtagt 20748258  T
Q  226 ccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||  |||||||||||||||||||||||||||||||||    
T  20748257 ccttattgaaaagctctcaacaaactcatcgtttacactttatgacctaggacctaccaatctagacttcaacctagaaactcctagatctga 20748165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 13790648 - 13790837
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || |||||||||||| |||||||||| |||| ||||        ||||||||    
T  13790648 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactatgggggctaccaagccaagaaggaaata-------tactagtg 13790740  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  13790741 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 13790837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 124 - 318
Target Start/End: Original strand, 17702376 - 17702564
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgt 222  Q
    ||||||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||||       ||||    
T  17702376 aaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccacta-------gtgt 17702468  T
Q  223 agtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||| ||||||| |||||||||||||||    
T  17702469 agtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttaaacctaggaactcctagatctga 17702564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 124 - 318
Target Start/End: Complemental strand, 9031569 - 9031383
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    |||||||| | |||| ||||||||||||| |||||||||||||||||| ||||| |||||| ||||||| ||||||| ||||||||       |||||||    
T  9031569 aaagtaaaaagcacaatgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagtcaggaaggaaatccac-------tagtgta 9031477  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||| |||||||||||||||||||||||   | | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  9031476 gtccttattcaatagctctcagcaaactcctcgtttgtgc-taatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 9031383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 9036689 - 9036864
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||| ||||||||| |||||||||||||| |||  |||| |||||| |||||| |||||||| ||||||||||       ||||||||||||||||    
T  9036689 cacagtgaatttgttaacccagttcggtgcaacatcacatactctgggggctaccaaaccaggaaggaaatccacta-------gtgtagtccttattca 9036781  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| ||| | | |||||| |||||||| || | ||||||||||||| |||||||||||||||    
T  9036782 atagctctcagcaaactcctcgtttgcac-taaagacctaggacctacccgtattgacttcaacctaggaactcctagatctga 9036864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 295428 - 295617
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||||       ||    
T  295428 agaaagtaaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccacta-------gt 295520  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||| ||| |||||||||||||||    
T  295521 gtagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacttaggaactcctagatctga 295617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 24195578 - 24195681
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| || |||||||| ||||||||||||||| |||||||||||    
T  24195578 actagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctaggagctacctgtatagacttcaacctaggaactcctagat 24195677  T
Q  315 ctga 318  Q
    ||||    
T  24195678 ctga 24195681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 142 - 314
Target Start/End: Original strand, 11656010 - 11656175
Alignment:
Q  142 agtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||| ||||| ||||||| |||| ||||| ||| || ||||||| ||||||  |||| |||||       ||||||||||||| |||||||||    
T  11656010 agtttgttaacccagtttggtgcaatgtcacctactctggaggctaccaagtcaggaaagaaattcacta-------gtgtagtccttatccaaaagctc 11656102  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||||||||||||||| ||||| || || ||| ||||||||||| |||||||||||    
T  11656103 tcagcaaactcctcgtttacactttatgacctaggacctgcccgtatagccttcaacctaggaactcctagat 11656175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 314
Target Start/End: Complemental strand, 15636160 - 15635878
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| ||| |||||||||| ||||| | ||| || | | |||||| ||||||||||||||||||||||||             ||||| |   |||    
T  15636160 aatacgttctgtttgatgttttagcgttttcaatgctacgattaatgtttcaacatcacgcgataaacagaaataaaaacaagaaaataaataacatgaa 15636061  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||||||| |||||||| | || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||       | ||||||||||    
T  15636060 agtaaagaacacaatgagtttgatgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaat-------tcactagtgtag 15635968  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||| ||||||||| |||||||||||||||||| ||||| ||| |||||||| || |||||||||| |||| |||||||||||    
T  15635967 tccttattcaatagctctcagtaaactcctcgtttacactatatgatctaggacctacccgtatagacttcaaactaggaactcctagat 15635878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 179 - 310
Target Start/End: Original strand, 8224865 - 8224989
Alignment:
Q  179 tgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagac 278  Q
    |||||| ||||||||||||||| ||||||||||       ||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||    
T  8224865 tgggggctaccaagccaggaaggaaatccacta-------gtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaagac 8224957  T
Q  279 ctacctgtctagacttcaacctagaaactcct 310  Q
    ||||| || ||| ||||||||||| |||||||    
T  8224958 ctacccgtatagtcttcaacctaggaactcct 8224989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 43 - 318
Target Start/End: Original strand, 44452366 - 44452638
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaaagtaaagaacacag 139  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||| |||||| ||||||             |||| ||   ||||||||||||||||     
T  44452366 gatgttttaacgtttgcaatgtttcgtttaatgttccaacatcacgtgataaaaagaaataaaaacaagaaaataaacgacaggaaagtaaagaacacaa 44452465  T
Q  140 tgagtttgttaactcagttcggtg-caacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaa 237  Q
    |||||||||| || |||||||||| |||   || |||| | | |||| | ||||||||||||| ||||||||||       ||||||| ||||||||| |    
T  44452466 tgagtttgttgacccagttcggtgacaaacacacctacgtctaggggct-ccaagccaggaaggaaatccacta-------gtgtagttcttattcaata 44452557  T
Q  238 gctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||| ||||||| | |||||||| || ||||||||||||||| |||||||||||||||    
T  44452558 gctctcagcaaactcctcgtttacactatatgacccatgacctacccgtatagacttcaacctaggaactcctagatctga 44452638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 123 - 316
Target Start/End: Original strand, 18547617 - 18547804
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||| |||| ||| |||||||||| || || ||||||| |||   || ||||| |||||| ||||||||||||||| ||||||| ||||       |    
T  18547617 gaaagtagagaatacaatgagtttgttgacccaattcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagt-------g 18547709  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||| ||||||  |||||||||||||||||||| |||||||||||||||||| || ||||||||||||||| ||||| |||||||    
T  18547710 tagtccttattcaatagctcttggcaaactcctcgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcatagatct 18547804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 125 - 314
Target Start/End: Complemental strand, 23954745 - 23954562
Alignment:
Q  125 aagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    |||||||||| ||| |||||||||| |  |||||||||| |||   || ||||| ||| || ||||||||||||||| ||||||| |||||       ||    
T  23954745 aagtaaagaatacaatgagtttgttgatccagttcggtggcaaacacacctactctggaggctaccaagccaggaaggaaatccattagtt-------ta 23954653  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||| |||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| || |||||||||||| |||||||||||    
T  23954652 gtcattattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatatacttcaacctaggaactcctagat 23954562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 314
Target Start/End: Complemental strand, 12054637 - 12054454
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||   |||||||||||| ||||| ||||||||||||| |||| ||||| | |||||||||||||  ||| |||| ||       ||| ||||    
T  12054637 agaaagtaaatggcacagtgagtttcttaacccagttcggtgcaatgtcacctactctaggggataccaagctcggaggaaa-tc-------tacaagtg 12054546  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||   ||||||||||||||||||||||||||||  | |||||  ||||||||||||| |||||||||||||||||||||||||    
T  12054545 tagtccttattctctagctctcagcaaactcctcgtttacactaaa-gaccttggacctacctgtcttgacttcaacctagaaactcctagat 12054454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 13913760 - 13913947
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||| ||||||| |||||||||||| | |||||||||||||||| ||||| |||||| |||||||||||| || ||||||        ||||||    
T  13913760 agaaagtaaaaaacacagagagtttgttaacccggttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatcc-------gctagtg 13913851  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || |||||||||   ||||||||||||||||||||||||||| | | |||||| || ||||| || |  |||||||||||| |||||||||||||||    
T  13913852 tactccttattctctagctctcagcaaactcctcgtttacac-taaagacctaggatctacccgttttaacttcaacctaggaactcctagatctga 13913947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 133 - 314
Target Start/End: Original strand, 13917823 - 13917995
Alignment:
Q  133 aacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttatt 232  Q
    ||||||| |||||||||||| || ||||||||||||||| ||||| |||||| ||||||||||| ||| ||||||| ||||       ||| ||||||||    
T  13917823 aacacagagagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccag-aaggaaatccaatagt-------gtactccttatt 13917914  T
Q  233 caaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |   ||||||||||||| ||||||||||||||  | |||||| ||||||||||||  ||||||||||||| |||||||||||    
T  13917915 ctctagctctcagcaaattcctcgtttacactaaa-gacctaggacctacctgtcctgacttcaacctaggaactcctagat 13917995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 28051104 - 28051293
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||| ||||||||||| || ||||| |||| |||   || ||||| |||||| ||||||||||||||| ||||||| ||||           
T  28051104 agaaagtaaagaacacggtgagtttgttgacccagtttggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccaatagt------- 28051196  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | | |||| ||| ||||||| | || |||||||||| |||||||||||||||    
T  28051197 gtagtccttattctatagctctcagcaaactcctcgtttacac-taaaggcctaggacatacctgtattgatttcaacctaggaactcctagatctga 28051293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 29 - 310
Target Start/End: Original strand, 19633759 - 19634035
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatg---agaa 125  Q
    |||| |||||| ||||||||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||             ||| ||   ||||    
T  19633759 aatatgttttgcatgatgttttaacgtttgcaatgttacgttcaatgttccaacatcatgcgataaacagaaataaaaacaagaaaataattgacaagaa 19633858  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||| ||||||||||||||||| ||  ||||| | | |||   |||||||| |  ||| ||||||||||||||| ||||||       ||||||||||    
T  19633859 agtaaataacacagtgagtttgttgacctagttcagcgacaaacacatctactct-agggctaccaagccaggaaggaaatcc-------actagtgtag 19633950  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcct 310  Q
    ||||||||| | ||||||||||||||||||||||||||| | | ||  || |||||||| || ||||||||||||||  |||||||    
T  19633951 tccttattctatagctctcagcaaactcctcgtttacac-taaagatataggacctacccgtatagacttcaacctaagaactcct 19634035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 124 - 318
Target Start/End: Complemental strand, 7496115 - 7495930
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    |||||||| | ||||  ||||||||||||||||||||||||||| ||  ||| | |||||| || |||||||||| |||| |||||||||       |||    
T  7496115 aaagtaaaaagcacaaagagtttgttaactcagttcggtgcaacatcgcctaatttgggggctatcaagccaggaggaaa-tccactagt-------gta 7496024  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||   ||||||||||||||||||||||||||| | | |||||| ||||||||  | | ||||||||||||| |||||||||||||||    
T  7496023 gtccttattctctagctctcagcaaactcctcgtttacac-taaagacctaggacctacccatattgacttcaacctaggaactcctagatctga 7495930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 18476984 - 18477082
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| ||| ||| ||||||||||  || |||||||||| |||| |||||||||||    
T  18476984 actagtgtagtccttattctaaagctctcagcaaactcctcgtttacac-ttaagacataagacctactcgtatagacttcaaactaggaactcctagat 18477082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 124 - 318
Target Start/End: Original strand, 8749010 - 8749196
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    |||||||||  || ||||||||||||||| || ||| ||||||||| | ||||| |||||  |||||||| |||||| ||||||||||       |||||    
T  8749010 aaagtaaagggcatagtgagtttgttaacccaattcagtgcaacgttagctactctggggactaccaagctaggaaggaaatccacta-------gtgta 8749102  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgt-ctagacttcaacctagaaactcctagatctga 318  Q
    |||| ||||||| |||||||||||| |||||||||| ||| | |||||||| || ||||| || ||| |||||||||||| |||||||||||||||    
T  8749103 gtccgtattcaatagctctcagcaagctcctcgtttgcac-taatgacctaggatctacccgtacta-acttcaacctaggaactcctagatctga 8749196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 6580970 - 6580868
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||    
T  6580970 actagtgtagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagat 6580872  T
Q  315 ctga 318  Q
    ||||    
T  6580871 ctga 6580868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 7479307 - 7479139
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    ||||||||||||||||||||||||||||||  ||| | |||||| |||||||||||| || ||||||       |||||||||||||||||||   ||||    
T  7479307 gagtttgttaactcagttcggtgcaacgtcgcctaatctgggggctaccaagccagg-aggaaatcc-------actagtgtagtccttattctctagct 7479216  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||| | | |||||| ||||||||  | | ||||||||| ||  || ||||||||||||    
T  7479215 ctcagcaaactcctcgtttacac-taaagacctaggacctacccatattgacttcaacatatgaagtcctagatctga 7479139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 15686259 - 15686160
Alignment:
Q  217 tagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    ||||||||||||||||| |||| |||||||||||  | ||||||||  ||| |||||| |||||||||||||||||||||||| || |||||||||||||    
T  15686259 tagtgtagtccttattctaaagttctcagcaaac--cacgtttacaacttaagacctatgacctacctgtctagacttcaacccaggaactcctagatct 15686162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 21254097 - 21253994
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | || ||||| ||||||||||||| |||  | | |||||| ||||||||||||||||||||||||||| ||||  |||||    
T  21254097 actagtgtagtccttattctatagttctcaacaaactcctcgttcacaactaaagacctaggacctacctgtctagacttcaacctaggaacttttagat 21253998  T
Q  315 ctga 318  Q
    ||||    
T  21253997 ctga 21253994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 21719029 - 21718927
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| | ||| |||| ||||||||||||| ||| |||||| || ||||| |||||||||| ||||||| |||||||||||    
T  21719029 actagtgtagtccttattctaaagttttcaacaaaatcctcgtttacac-ttaagacctaggatctacccgtctagactttaacctaggaactcctagat 21718931  T
Q  315 ctga 318  Q
    ||||    
T  21718930 ctga 21718927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 18064395 - 18064207
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||  ||||| ||||||||||||| |||||||||| |||   || ||||| | | || ||||||| ||||||| ||||||||||||       |    
T  18064395 gaaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactctagaggctaccaaggcaggaaggaaatccactagt-------g 18064303  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||| | |||||||| |||||||||||||||||| | | |||||| |||||| | || | || |||||||||| |||||||||||||||    
T  18064302 tagtccttattctatagctctcaacaaactcctcgtttacac-taaagacctaggacctaaccgtattgatttcaacctaggaactcctagatctga 18064207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 18035085 - 18034897
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||  ||||| ||||||||||||| |||||||||| |||   || ||||| | | || ||||||||||||||| ||||||||||||       |    
T  18035085 gaaagtaaaagacacaatgagtttgttaacccagttcggtgacaaacacacctactcttgaggctaccaagccaggaaggaaatccactagt-------g 18034993  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||| | || |||||||||||||||| |||||||   | |||||| |||||||| || |  | |||||||||| |||||||||||||||    
T  18034992 tagtccttattctataggtctcagcaaactcctcatttacac-caaagacctaggacctacccgtatctatttcaacctaggaactcctagatctga 18034897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 21094805 - 21094703
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctaga-cttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| |||| |||||| ||||  | ||||||||  ||| |||||| |||||||| ||||||| ||||||||||| ||||||||||    
T  21094805 actagtgtagtccttattctaaagttctcagtaaac--cacgtttacaacttaagacctaggacctacccgtctagaacttcaacctaggaactcctaga 21094708  T
Q  314 tctga 318  Q
    |||||    
T  21094707 tctga 21094703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 246 - 318
Target Start/End: Complemental strand, 18483444 - 18483372
Alignment:
Q  246 caaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| ||| ||| |||||||    
T  18483444 caaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaacacctggatctga 18483372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 17042857 - 17042755
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | |||||||| ||||||||||||||| || | | |||||| |||||||| || | || ||||||| || |||||||||||    
T  17042857 actagtgtagtccttattctatagctctcaacaaactcctcgtttaaac-taaagacctaggacctacccgtattgatttcaacccaggaactcctagat 17042759  T
Q  315 ctga 318  Q
    ||||    
T  17042758 ctga 17042755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 219 - 318
Target Start/End: Original strand, 31649749 - 31649846
Alignment:
Q  219 gtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctg 317  Q
    ||||||||||||||| |  | ||||||||||||||||||||||| || || |||||| |||||||| |||| |||||||||||||||| ||||| |||||    
T  31649749 gtgtagtccttattcta--gttctcagcaaactcctcgtttacaactcta-gacctaggacctacccgtcttgacttcaacctagaaaatcctatatctg 31649845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 286996 - 286893
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||| |||||||||||| || | |||||| |||||||| ||||| |    | |||||| |||||||| ||||||| |||||||||| |||||||||||    
T  286996 actagtatagtccttattctaatgttctcaggaaactccttgtttataacacaagacctaggacctacccgtctagatttcaacctaggaactcctagat 286897  T
Q  315 ctga 318  Q
    ||||    
T  286896 ctga 286893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 181 - 329
Target Start/End: Complemental strand, 3552344 - 3552204
Alignment:
Q  181 ggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacc 279  Q
    |||| ||||||||||||||||||||||| ||||       ||||||||||||| || | ||| | ||||||||||||||||| || || |||||||||||    
T  3552344 ggggctaccaagccaggaagaaaatccagtagt-------gtagtccttattctaa-gttctaaacaaactcctcgtttacaactcta-gacctaagacc 3552254  T
Q  280 tacctgtctagacttcaacctagaaactcctagatctgatgtccatctca 329  Q
    |||  |||| ||||||||| ||| ||||||| |||||||  |||||||||    
T  3552253 tactcgtcttgacttcaacttaggaactccttgatctgagatccatctca 3552204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 220 - 274
Target Start/End: Complemental strand, 1919335 - 1919281
Alignment:
Q  220 tgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgaccta 274  Q
    |||||||||||||||| |||| ||||||||||| ||||||||||| |||||||||    
T  1919335 tgtagtccttattcaatagctttcagcaaactcttcgtttacactatatgaccta 1919281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 123 - 252
Target Start/End: Complemental strand, 19532073 - 19531950
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| |  || ||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||       |||||    
T  19532073 gaaagtaaagaacacaatgagtttgttgatccaattcggtgacaaacacacctactttgggggctaccaagccaggaaggaaatccac-------tagtg 19531981  T
Q  222 tagtccttattcaaaagctctcagcaaactc 252  Q
    | |||||||||||| ||||||||| ||||||    
T  19531980 tcgtccttattcaatagctctcagaaaactc 19531950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 980468 - 980370
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||| | |||| | |||| ||||  | ||||||||  ||| ||| ||  |||||||||||||||||||||||||| |||||||||||    
T  980468 actagtgtagtccttatactaaagttttcagtaaac--cacgtttacaacttaagacatagaacctacctgtctagacttcaacctag-aactcctagat 980372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 13524871 - 13524736
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||||||| | |||||||||| || |||||||||   |   || ||||| |||||| ||||||| || |||| ||||||||| ||       |    
T  13524871 agaaagtaaagaacaaaatgagtttgttgacccagttcggtcacaaaacacctactctgggggctaccaagtcaagaaggaaatccactggt-------g 13524779  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacact 264  Q
    |||||||||||| | || |||||||||||||||| ||||||||    
T  13524778 tagtccttattctatagttctcagcaaactcctcatttacact 13524736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 11558495 - 11558417
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||| ||||||||||||  ||||||||| ||||  || ||||||||| || ||||||||||||||| ||||||||||||    
T  11558495 cacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagt 11558417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 11567764 - 11567686
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||| ||||||||||||  ||||||||| ||||  || ||||||||| || ||||||||||||||| ||||||||||||    
T  11567764 cacagagagtttgttaaccaagttcggtgacaaca-cacctactatggaggctaccaagccaggaaggaaatccactagt 11567686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 102
Target Start/End: Complemental strand, 19532159 - 19532097
Alignment:
Q  40 tatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||||  | ||||| | |||||| | |||||||| ||||||||||||||||||||||||    
T  19532159 tatgatgttacagcgttttcaatgttacgatcaatgtttcaacatcacgcgataaacagaaat 19532097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 1919522 - 1919449
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||| |||||| |||||   ||||||| ||||||   | |||||| ||||||||||||||||||||||||    
T  1919522 aatacgttctgtatgttgtttccgcgtttgcaatgttacaattaatgtttcaacatcacgcgataaacagaaat 1919449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 143 - 211
Target Start/End: Complemental strand, 10189368 - 10189299
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccacta 211  Q
    |||||||||| |||||||||||||||||| |||| | | |||| |||||||| |||||| |||| |||||    
T  10189368 gtttgttaacccagttcggtgcaacgtcacctacatgtaggggctaccaagctaggaaggaaattcacta 10189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 53 - 102
Target Start/End: Original strand, 13790575 - 13790624
Alignment:
Q  53 cgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    ||||||| |||||| | | |||||| ||||||||||||||||||||||||    
T  13790575 cgtttgcaatgttacgattaatgtttcaacatcacgcgataaacagaaat 13790624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 10082443 - 10082375
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccact 210  Q
    |||||||||| |||||||||||||||||| |||| | | |||| |||||||| |||||| |||| ||||    
T  10082443 gtttgttaacccagttcggtgcaacgtcacctacatctaggggctaccaagctaggaaggaaattcact 10082375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Complemental strand, 19584078 - 19584010
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccacta 211  Q
    ||||||||| |||||| |||||| |||| |||| | | |||||  ||||||||||||||||||||||||    
T  19584078 tttgttaacccagttcagtgcaatgtcacctacatctaggggaatccaagccaggaagaaaatccacta 19584010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 137; Significance: 2e-71; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 16501 - 16215
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaa--atnnnnnnnnnnnnntaaatga---g 123  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||  |              |||||||   |    
T  16501 aatacgttatgtatgatgttttaacgtttgcgatgttacgtttaat-ttccaacatcacgcgataaacagaagaaaaaaaacaagaaaataaatgacaag 16403  T
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| | ||| |||||| ||||||||||||||| ||||||||||||       |||    
T  16402 aaagtaaagaacacagtgagtttgttaacccagttcggtgcaacgtcaaccactttgggggctaccaagccaggaaggaaatccactagt-------gta 16310  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||| |||||||||| |||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  16309 gtccttattcaaaagctctcaacaaactcctcatttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 16215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 126; Significance: 6e-65; HSPs: 53)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 13455398 - 13455113
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| |||||||||||||||||||| |||||||| ||| |||||||||||||||||  |||||||||| |             |||||||   |||    
T  13455398 aatatgttctgtatgatgttttaacgttttcgatgttacgttaaatgttccaacatcacgttataaacagaactaaaaacaagagaataaatgacaagaa 13455299  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagt 225  Q
    ||||||||||||| |||||||||||||  ||||||||||||||||| ||||| |||||| |||||||| |||||| ||||||||||||       |||||    
T  13455298 agtaaagaacacaatgagtttgttaacctagttcggtgcaacgtcacctactctgggggctaccaagcaaggaaggaaatccactagt-------gtagt 13455206  T
Q  226 ccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||||  ||||||||||||||||||||||||||| || |||||||| |||||||||||||||||| |||||||||||||||    
T  13455205 ccttattcaaaagctcttggcaaactcctcgtttacactttatgacttaggacctacccgtctagacttcaacctaggaactcctagatctga 13455113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 4458708 - 4458897
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||||||| |||||| ||  ||||||||| |||   || ||||| |||||| ||||||||||||||| |||||       ||||||||    
T  4458708 gaaagtaaagaacacagtgaatttgttgaccgagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatc-------tactagtg 4458800  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  4458801 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 4458897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 3290861 - 3290685
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| ||||| |||||||||||| | ||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||||    
T  3290861 cacagtgagtttgttaacccagtttggtgcaacgtcaccaactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattca 3290769  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  3290768 atagctctcagcaaactcctcgttttcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 3290685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 142 - 319
Target Start/End: Original strand, 15506256 - 15506426
Alignment:
Q  142 agtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||| || |||| |||||||||| ||||| | |||| ||||||||||| | | ||||||||||       |||||||||||||||||||||||    
T  15506256 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaatggaaatccacta-------gtgtagtccttattcaaaagctc 15506348  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctgat 319  Q
    ||||||||||||||||||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||||||    
T  15506349 tcagcaaactcctcgtttacattttatgacctaggacctacccgtatagacttcaacctaggaactcctagatctgat 15506426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 48797795 - 48797620
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||| ||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||||    
T  48797795 cacagtgagtttgttaacccagttcagtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattca 48797703  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  48797702 atagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 48797620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 145 - 318
Target Start/End: Original strand, 42782747 - 42782913
Alignment:
Q  145 ttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctca 244  Q
    |||||||| ||||||||||||| |||| ||||| |||||| ||||||||||||||||||||||||||       ||||||||||||||||| ||||||||    
T  42782747 ttgttaacccagttcggtgcaatgtcacctactctgggggctaccaagccaggaagaaaatccacta-------gtgtagtccttattcaatagctctca 42782839  T
Q  245 gcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||| || | ||||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  42782840 gcaaactcctcgtttgcaatatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 42782913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 16208168 - 16207882
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| |||||||||||||||| ||||  |||||  |||||||||||||||||||||| ||||||| ||||             |||||||   |||    
T  16208168 aatatgttatgtatgatgttttaacatttgtaatgtttcgttcaatgttccaacatcacgcaataaacataaataaaaacaataaaataaatgataggaa 16208069  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||| ||| |||||||||| || || ||||| | |||   || ||||| |||||| ||||||||||||||| ||||||||||||       ||||    
T  16208068 agtaaagaagacaatgagtttgttgacccatttcggcgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt-------gtag 16207976  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||| || | || |||||||||| ||||| |||||||||    
T  16207975 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctagcacctacccgtattgatttcaacctaggaactcatagatctga 16207882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 145 - 318
Target Start/End: Original strand, 30226076 - 30226243
Alignment:
Q  145 ttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctc 243  Q
    |||||||| |||||||||||||||||| |||| | |||||| ||||||| ||||||| ||||||||||       ||||||||||||||||| |||||||    
T  30226076 ttgttaacccagttcggtgcaacgtcacctacatctgggggctaccaagtcaggaaggaaatccacta-------gtgtagtccttattcaatagctctc 30226168  T
Q  244 agcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  30226169 agcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 30226243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 142 - 311
Target Start/End: Original strand, 15436037 - 15436199
Alignment:
Q  142 agtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||| || |||| |||||||||| ||||| | |||| ||||||||||| ||| ||||||||||       |||||||||||||||||||||||    
T  15436037 agtttgttaacccaattcgatgcaacgtcacctactctaggggctaccaagccagaaaggaaatccacta-------gtgtagtccttattcaaaagctc 15436129  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactccta 311  Q
    |||||||||||||||||||||||||||||| || ||||||||  | ||||||||||| ||| ||||||||    
T  15436130 tcagcaaactcctcgtttacactttatgacttaggacctacccatatagacttcaacgtaggaactccta 15436199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 135 - 315
Target Start/End: Original strand, 11628621 - 11628794
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||| | |||||| |||||||||     ||  |||||||||||||||    
T  11628621 cacagtgagtttgttaacccagttcggtgcaacgtcacctactttgggggttaccaaactaggaaggaaatccact-----ct--tgtagtccttattca 11628713  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatc 315  Q
    | |||||| |||||||||||||||| |||| ||||||||| |||||||| ||   ||||||| ||||| ||||||||||||    
T  11628714 atagctcttagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcagcctaggaactcctagatc 11628794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 123 - 316
Target Start/End: Complemental strand, 11521600 - 11521413
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| || ||||| |||| |||   || ||||| | |||| ||||||||||||||| |||||       ||||||||    
T  11521600 gaaagtaaataacacaatgagtttgttgacccagtttggtgacaaacacacctactctaggggctaccaagccaggaaggaaatc-------tactagtg 11521508  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || || ||| |||||||| |||||||||||||    
T  11521507 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatatactccaacctaggaactcctagatct 11521413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 12325868 - 12325971
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||  ||||||||||| ||||||||||||||| |||||||| ||    
T  12325868 actagtgtagtcattattcaaaagctctcagcaaactcctcatttacactttatgaccttggacctacctgtatagacttcaacctaggaactcctacat 12325967  T
Q  315 ctga 318  Q
    ||||    
T  12325968 ctga 12325971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 645005 - 645291
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| |||||||||||| | ||||||| ||||||     |||||| ||||||||||||||||||||||||             |||||||   |||    
T  645005 aatacgttctgtatgatgtttaatcgtttgcaatgttacaactaatgtttcaacatcacgcgataaacagaaataaaaacaagaaaataaatgacaggaa 645104  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||| |||||| ||| ||||||||| |||||| ||| |||   || |||||||||||| ||| ||||||||||| |||||||| |||       ||||    
T  645105 agtaaataacacaatgaatttgttaacccagttcagtgacaaacacacctactatgggggctacgaagccaggaaggaaatccaccagt-------gtag 645197  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| ||||||||||||||| ||||||||||||  |||||||| ||||| || || |||| |||||||||| |||||||||||||||    
T  645198 tccttattcaatagctctcagcaaacttctcgtttacactacatgacctaggacctccccgtatagatttcaacctaggaactcctagatctga 645291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 7620062 - 7620237
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| || ||||||| ||||||| ||||||       ||||||||||||||||||||    
T  7620062 cacagtgagtttgttaacccagttcggtgcaacgtcacctactttggaggctaccaagtcaggaaggaaatcc-------actagtgtagtccttattca 7620154  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgt-ctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||| ||||||||| ||| | |||||||| ||| |||| || ||| |||||||||||| |||||||||||||||    
T  7620155 atagctctcagcaaaatcctcgtttgcac-taatgacctaggacttacccgtacta-acttcaacctaggaactcctagatctga 7620237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 11588432 - 11588622
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || ||| |||||| |||   || ||||| | | || ||||||||||||||| ||||||||||       ||    
T  11588432 agaaagtaaagaacacagtgagtttgttgacccagctcggtgacaaacacacctactctagcggctaccaagccaggaaggaaatccacta-------gt 11588524  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||| |||||||   |||||||||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||| ||||||    
T  11588525 gtagtccttattcaatagctctctaaaaactcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctatatctga 11588622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 11998934 - 11999037
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  11998934 actagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 11999033  T
Q  315 ctga 318  Q
    ||||    
T  11999034 ctga 11999037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 14165220 - 14165323
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||| |||  ||||||| || ||||||||||||||| |||||||||||    
T  14165220 actagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgatctagaacctacccgtatagacttcaacctaggaactcctagat 14165319  T
Q  315 ctga 318  Q
    ||||    
T  14165320 ctga 14165323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 9564225 - 9564412
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||   ||||| |||||||||||| |||||||||||||||||| ||||| |||||| ||| ||||||||| |||| |||| ||||       |    
T  9564225 agaaagtaaaaggcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctacaaagccaggaggaaa-tccaatagt-------g 9564316  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||   |||||||||||||||||||||||||||   | |||||| |||||||| | || ||||||||||||| |||||||||||||||    
T  9564317 tagtccttattctctagctctcagcaaactcctcgtttacac-aaaagacctaggacctacccgccttgacttcaacctaggaactcctagatctga 9564412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 20991511 - 20991699
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||       |||||||    
T  20991511 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatcc-------actagtg 20991603  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||  | ||||||||||||||||||||||||||| | | |||||| |||||| |    ||||||||||||||| |||||||||||||||    
T  20991604 tagtccttattttatagctctcagcaaactcctcgtttacac-taaagacctaggacctatccagatagacttcaacctaggaactcctagatctga 20991699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 7586634 - 7586533
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||  |||||||||| ||||||||||||  ||| |||||| |||||||| ||||||||||||||||||||||||||||||    
T  7586634 actagtgtagtccttattctaaacttctcagcaaaatcctcgtttacaacttaagacctaggacctacccgtctagacttcaacctagaaactcctagat 7586535  T
Q  315 ct 316  Q
    ||    
T  7586534 ct 7586533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 16436742 - 16436931
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || || ||||||| |||   || |||||||||||| |||||||| |||||| ||||||       ||||||    
T  16436742 agaaagtaaagaacacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatcc-------actagt 16436834  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||   |||||||| |||||||||| ||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  16436835 gtagtccttattctgtagctctcaacaaactcctcatttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 16436931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 23956845 - 23957034
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||||||||   ||||| ||||||||| ||  ||||||||| |||   |||||||| | | || ||||||||||||||||||||||||||||           
T  23956845 agaaagtaaaaggcacagagagtttgttgacctagttcggtgacaaacacatctactttagaggctaccaagccaggaagaaaatccactagt------- 23956937  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| |||| |||||||||||  | |||||||| ||||| |||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  23956938 gtagtccttattctaaagttctcagcaaac--cacgtttacaactttaagacctaggacctacccgtctagacttcaacctaggaactcctagatctga 23957034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 318
Target Start/End: Original strand, 14984659 - 14984828
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| || |||||||||||| ||||||       ||||||||||||||||||||| | ||    
T  14984659 gagtttgttaacccagttcggtgcaacgtcacctactctgggggctatcaagccaggaaggaaatcc-------actagtgtagtccttattcaatatct 14984751  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||| ||||||||  |||| ||| | ||||||||  ||||||| ||   ||||||||||||| || ||||||||||||    
T  14984752 ctcaacaaactccctgtttgcac-taatgacctagaacctacccgtactgacttcaacctaggaattcctagatctga 14984828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 141 - 318
Target Start/End: Original strand, 15414270 - 15414439
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||||||| |||||||||||||||||| ||||| |||||| || |||||||||||| ||||||       ||||||||||||||||||||| | ||    
T  15414270 gagtttgttaacccagttcggtgcaacgtcacctactctgggggctatcaagccaggaaggaaatcc-------actagtgtagtccttattcaatatct 15414362  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||| ||||||||  |||| ||| | ||||||||  ||||||| ||   ||||||||||||| || ||||||||||||    
T  15414363 ctcaacaaactccctgtttgcac-taatgacctagaacctacccgtactgacttcaacctaggaattcctagatctga 15414439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 9566874 - 9567061
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||||| | |||||  ||||| |||||||||||| || ||||||       || ||||    
T  9566874 agaaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgttacctactcagggggctaccaagccagg-aggaaatcc-------acaagtg 9566965  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||   ||||||||||||||||||| ||||||| | | |||||| ||||||||  ||| || |||||||||| ||||| |||||||||    
T  9566966 tagtccttattctctagctctcagcaaactcctcatttacac-taaagacctaggacctacccatcttgagttcaacctaggaactcatagatctga 9567061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 135 - 319
Target Start/End: Complemental strand, 11560682 - 11560506
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| ||||||||||||  |||| ||||| |||||| |||||||| |||||| ||||||        ||| |||||| ||||||||    
T  11560682 cacagtgagtttgttaacccagttcggtgcactgtcacctactctgggggctaccaagctaggaaggaaatcc-------gctattgtagtgcttattca 11560590  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctgat 319  Q
    | ||||||||| ||||||||| ||||||| | | ||||||  ||||||| || | ||||||||||||| ||||||| ||||||||    
T  11560589 atagctctcagtaaactcctcatttacac-taaagacctacaacctacccgtattgacttcaacctaggaactcctggatctgat 11560506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 144 - 318
Target Start/End: Original strand, 14975423 - 14975589
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctc 243  Q
    ||||||||| |||||||||||||||||| |||||  |||||  |||| ||||||||  |||||       |||||||||| ||||||||||| |||||||    
T  14975423 tttgttaacccagttcggtgcaacgtcacctactccgggggcaaccatgccaggaacgaaatc-------tactagtgtattccttattcaatagctctc 14975515  T
Q  244 agcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||||| ||||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  14975516 aacaaacttctcgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 14975589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 144 - 318
Target Start/End: Original strand, 15404899 - 15405065
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctc 243  Q
    ||||||||| |||||||||||||||||| |||||  |||||  |||| ||||||||  |||||       |||||||||| ||||||||||| |||||||    
T  15404899 tttgttaacccagttcggtgcaacgtcacctactccgggggcaaccatgccaggaacgaaatc-------tactagtgtattccttattcaatagctctc 15404991  T
Q  244 agcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||||| ||||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  15404992 aacaaacttctcgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 15405065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 4794778 - 4794588
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||| |||| | ||||| |||||| ||||| |||||| ||||||||||| ||||| |||||| ||||||||||||| |||| |||||||||       |    
T  4794778 agaaattaaaaagcacagagagttttttaacccagttcagtgcaacgtcacctactctgggggctaccaagccaggaggaaa-tccactagt-------g 4794687  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacct---agaaactcctagatctga 318  Q
    ||||||||||||   ||||||| | ||||||||||||||||| | | |||||| |||||||| |||| |||||||||||   || |||||||||||||||    
T  4794686 tagtccttattctctagctctcggaaaactcctcgtttacac-taaagacctaggacctacccgtcttgacttcaacctaggaggaactcctagatctga 4794588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 14926701 - 14926800
Alignment:
Q  214 tactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  | | |||||| |||||||| || | || ||||||||||||||| |||||    
T  14926701 tactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-gtaaagacctaggacctacccgtattgatttcaacctagaaacttctaga 14926799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 214 - 314
Target Start/End: Original strand, 15350167 - 15350266
Alignment:
Q  214 tactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||  | | |||||| |||||||| || | || ||||||||||||||| |||||    
T  15350167 tactagtgtagtccttattcaatagctctcagcaaactcctcgtttaca-gtaaagacctaggacctacccgtattgatttcaacctagaaacttctaga 15350265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 215 - 311
Target Start/End: Complemental strand, 20925205 - 20925110
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactccta 311  Q
    |||||| | |||||||||| | |||||||| |||||||||||||||||||  | |||||||||||||||||||||||||||||| ||| ||||||||    
T  20925205 actagtttcgtccttattctatagctctcaacaaactcctcgtttacactaaa-gacctaagacctacctgtctagacttcaacttaggaactccta 20925110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 10038832 - 10038729
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| |||| |||||||| |||||||||  ||| |||||| ||||| |  |||||||||||||||||  |||||||||||    
T  10038832 actagtgtagtccttattctaaagttctcggcaaactcttcgtttacaacttaagacctaggacctgctcgtctagacttcaacctaagaactcctagat 10038733  T
Q  315 ctga 318  Q
    ||||    
T  10038732 ctga 10038729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 24902161 - 24902262
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||  |||| |||||| ||||  | ||||||||  ||| |||||| |||||||| |||||||||||||||||| |||||||||||    
T  24902161 actagtgtagtccttattataaagttctcagtaaac--cacgtttacaacttaagacctaggacctacccgtctagacttcaacctaggaactcctagat 24902258  T
Q  315 ctga 318  Q
    ||||    
T  24902259 ctga 24902262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 26133105 - 26132917
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||||||||  ||||| ||||||||||||| |||||||||| ||| | || ||||| |||||| || |||||||||||| ||||||       ||||||    
T  26133105 agaaagtaaaagacacaatgagtttgttaacccagttcggtgacaaagacacctactctgggggctatcaagccaggaaggaaatcc-------actagt 26133013  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| || | ||||||||||  || | ||||||    | ||||||||||||||| || | || |||||||||| |||||||||||||||    
T  26133012 gtagtccttattctaatgttctcagcaaa--ccacatttacaacacaagacctaagacctacccgtattgatttcaacctaggaactcctagatctga 26132917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 29546321 - 29546139
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||||||||||||||| || || ||| || || |      |||| | |||| ||||||||||||||| |||||||||| |       |    
T  29546321 agaaagtaaagaacacagtgagtttgttgacccaattcagtacacc------tactctcggggctaccaagccaggaaggaaatccactact-------g 29546235  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||| | | ||||||||||||| ||||||||||| | | |||||| |||||||| || ||||||| | ||||| |||||||||||||||    
T  29546234 tagtccttattctataactctcagcaaacttctcgtttacac-taaagacctaggacctacccgtatagactttagcctaggaactcctagatctga 29546139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 42636302 - 42636404
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | |||||||||||||||||| |||||||| | | |||||| ||||||||  | | || |||||||||| |||||||||||    
T  42636302 actagtgtagtccttattctatagctctcagcaaactccttgtttacac-taaagacctaggacctacccatattgatttcaacctaggaactcctagat 42636400  T
Q  315 ctga 318  Q
    ||||    
T  42636401 ctga 42636404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 2076496 - 2076565
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||||||| |||||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||||    
T  2076496 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2076565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 2082915 - 2082984
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||||||| |||||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||||    
T  2082915 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccatgaaggaaatccactagt 2082984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 286
Target Start/End: Original strand, 10658438 - 10658508
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgt 286  Q
    ||||||||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||||||    
T  10658438 actagtgtagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacctgt 10658508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 143 - 318
Target Start/End: Original strand, 24813914 - 24814082
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    |||||||||| |||||||||||||| | | |||| || ||||| ||||||||||||||| ||||||       ||||||||||||||||||   ||||||    
T  24813914 gtttgttaacccagttcggtgcaacatgacctacataggggggctaccaagccaggaaggaaatcc-------actagtgtagtccttatt-gtaagctc 24814005  T
Q  242 tcagcaaactcctcgttt-acactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||| || |||| | ||| || |||||| |||||||| || |  |||||||||||| |||||||||||||||    
T  24814006 tcagcaaactactagtttaaaactcta-gacctaggacctacccgtatcaacttcaacctaggaactcctagatctga 24814082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 218 - 318
Target Start/End: Original strand, 10279872 - 10279971
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctg 317  Q
    |||||||||||||||| | ||||||||||||||||||||||| ||||  || ||||| |||||| | || | || |||||||||| ||||| ||||||||    
T  10279872 agtgtagtccttattctatagctctcagcaaactcctcgtttgcactaaat-acctaggacctatccgtattgatttcaacctaggaactcgtagatctg 10279970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 23082877 - 23082776
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| ||||||||||  || ||||||||  ||| ||| || || ||| | |||||||||||||||||| ||||| |||||    
T  23082877 actagtgtagtccttattctaaagttctcagcaaa--ccacgtttacaacttaagacgtaggatctagccgtctagacttcaacctaggaactcatagat 23082780  T
Q  315 ctga 318  Q
    ||||    
T  23082779 ctga 23082776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 9894170 - 9894068
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| || | |||||||||| |||  |||||||  ||| |||||| ||| |||| || | ||||||||||||| |||||||||||    
T  9894170 actagtgtagtccttattctaa-gttctcagcaaattccaagtttacaacttaagacctaggacatacccgtattgacttcaacctaggaactcctagat 9894072  T
Q  315 ctga 318  Q
    ||||    
T  9894071 ctga 9894068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 43 - 101
Target Start/End: Original strand, 11998765 - 11998823
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaa 101  Q
    ||||||||||||||||| |||||  ||| ||||||||||||||||| ||||||||||||    
T  11998765 gatgttttaacgtttgcaatgttccgtttaatgttccaacatcacgtgataaacagaaa 11998823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 143 - 213
Target Start/End: Complemental strand, 23175050 - 23174979
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagt 213  Q
    |||||||||| |||||||||||||| ||| |||| | | |||| ||||||||||||||| ||||||||||||    
T  23175050 gtttgttaacccagttcggtgcaacatcacctacatctaggggctaccaagccaggaaggaaatccactagt 23174979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 173 - 317
Target Start/End: Complemental strand, 23580092 - 23579956
Alignment:
Q  173 ctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgac 271  Q
    |||||||||||| |||||||||| |||| |||||       |||||||||||||||||||  || | | ||||||||||||||||||||| || ||  ||    
T  23580092 ctactatgggggttaccaagccaagaaggaaatc-------tactagtgtagtccttattttaa-gttttcagcaaactcctcgtttacaactataa-ac 23580002  T
Q  272 ctaagacctacctgtctagacttcaacctagaaactcctagatctg 317  Q
    ||| |||||||| |||| || |||||||||  ||||||||||||||    
T  23580001 ctaggacctacccgtcttgaattcaacctaagaactcctagatctg 23579956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 269 - 318
Target Start/End: Original strand, 23296611 - 23296660
Alignment:
Q  269 gacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||| |||||||| |||| ||||||||||||| |||||||||||||||    
T  23296611 gacctaggacctacccgtcttgacttcaacctaggaactcctagatctga 23296660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 38 - 86
Target Start/End: Original strand, 12325706 - 12325754
Alignment:
Q  38 tgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatca 86  Q
    |||||||||||||||| ||||| |||||  |||||||||||||||||||    
T  12325706 tgtatgatgttttaacatttgcaatgttccgttcaatgttccaacatca 12325754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 15708226 - 15708328
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||  || | | |||| |||||||||||||||| || || |||||| |||||||| || | ||||| ||||||| ||||||||||    
T  15708226 actagtgtagtccttattttaa-gttttcagaaaactcctcgtttacaactcta-gacctacgacctacccgtattgacttgaacctaggaactcctaga 15708323  T
Q  314 tctga 318  Q
    |||||    
T  15708324 tctga 15708328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 143 - 318
Target Start/End: Complemental strand, 26195626 - 26195459
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    |||||||||| |||||||||||||| ||| |||| | ||| || |||||||||| ||||||||| ||||| |       ||| ||||||||| || | ||    
T  26195626 gtttgttaacccagttcggtgcaac-tcacctacatctggaggctaccaagccaagaagaaaattcactact-------gtattccttattctaa-gttc 26195536  T
Q  242 tcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||| |||||||||||| || || |||||| ||||||||||| |  | |||||||||| |||||||| ||||||    
T  26195535 tcagcaaattcctcgtttacaactcta-gacctaggacctacctgtattaaattcaacctaggaactcctaaatctga 26195459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 217 - 262
Target Start/End: Original strand, 21260572 - 21260617
Alignment:
Q  217 tagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca 262  Q
    ||||||||||||||||| |||| ||||| |||||| ||||||||||    
T  21260572 tagtgtagtccttattctaaagttctcaacaaactactcgtttaca 21260617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 181 - 213
Target Start/End: Original strand, 6045348 - 6045380
Alignment:
Q  181 ggggataccaagccaggaagaaaatccactagt 213  Q
    |||| ||||||||||||||||||||||||||||    
T  6045348 ggggctaccaagccaggaagaaaatccactagt 6045380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 6e-59; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 20845966 - 20845796
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||||||| |||||||||||||||||| |||||||||||| ||||||| ||||||| ||||||||||||       ||||||||||||||||| ||    
T  20845966 gagtttgttaacccagttcggtgcaacgtcacctactatgggggctaccaagtcaggaaggaaatccactagt-------gtagtccttattcaaaatct 20845874  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  20845873 ctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 20845796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 13735164 - 13734975
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||  |||||||||||||||| || || ||||||| |||   || ||||| |||||| ||||||| ||||||| ||||||| ||||       |    
T  13735164 gaaagtaaaagacacagtgagtttgttgacccacttcggtgacaaacacacctactctgggggttaccaagtcaggaaggaaatccattagt-------g 13735072  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  13735071 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 13734975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 17920961 - 17920786
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| | |||| ||||||||||||||| ||||||||||||       ||||||| ||||||    
T  17920961 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctaggggctaccaagccaggaaggaaatccactagt-------gtagtccgtattca 17920869  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||| ||| |||||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  17920868 aaagctctcagcaaactcctcgtttgcac-ttatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 17920786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 124 - 318
Target Start/End: Complemental strand, 7898103 - 7897917
Alignment:
Q  124 aaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    ||||||||  ||||||||||||||||||| |||||||||||||||||| ||||| ||| || ||||||||||||||| ||||||||       |||||||    
T  7898103 aaagtaaaagacacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagccaggaaggaaatccac-------tagtgta 7898011  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||| ||||||||||||||||||||||| ||| | |||||||| |||||||| ||   ||||||||||||| ||||| |||||||||    
T  7898010 gtccttattcaatagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcttagatctga 7897917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 134 - 318
Target Start/End: Complemental strand, 20498332 - 20498155
Alignment:
Q  134 acacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattc 233  Q
    ||||||||| ||||||||| |||||||||||||||||| ||||| ||| || ||||||| ||||||| ||||||||| ||       |||||||||||||    
T  20498332 acacagtgaatttgttaacccagttcggtgcaacgtcacctactctggaggctaccaagtcaggaaggaaatccactcgt-------gtagtccttattc 20498240  T
Q  234 aaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||||||||||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  20498239 aatagctctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 20498155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 26183412 - 26183236
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| |||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| |||| |||||||       ||||||||||||||    
T  26183412 cacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatacactagt-------gtagtccttattca 26183320  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||| ||||||| |||| |||||||||  ||||||| ||   ||||||||||||| |||||||||||||||    
T  26183319 atagctctcagcaaacttctcgtttgcactatatgacctagaacctacccgtactgacttcaacctaggaactcctagatctga 26183236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 22404952 - 22404763
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| || |||||||||| |||   || || || | |||| ||||||||||||||| ||||||||||||            
T  22404952 gaaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacctgctctaggggctaccaagccaggaaggaaatccactagta------- 22404860  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  22404859 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 22404763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 24189831 - 24190020
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||||||||||||||||||| ||  ||||||||| |||   ||  |||| |||||| ||||||||| ||||| |||| |||||       |||    
T  24189831 gaaagtaaagaacacagtgagtttgttgacctagttcggtgacaaacacacatactctgggggctaccaagccgggaaggaaattcacta-------gtg 24189923  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||| |||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| ||||| |||||||||    
T  24189924 tagtctttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcatagatctga 24190020  T

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Target: chr5; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 215 - 315
Target Start/End: Complemental strand, 22246456 - 22246356
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||| |||||||| || ||||||||||||||| |||||||||||    
T  22246456 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatttgacctaggacctacccgtatagacttcaacctaggaactcctagat 22246357  T
Q  315 c 315  Q
    |    
T  22246356 c 22246356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 20741114 - 20740939
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||| ||||||| || |||||| |||||||| ||||| |||||| |||||||| |||| | ||||||||||||       |||||||||||||     
T  20741114 cacagtgagtctgttaacccaattcggttcaacgtcacctactctgggggctaccaagcgaggagggaaatccactagt-------gtagtccttattct 20741022  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
      ||||||||||||||||||||||||||| | | |||||| |||||| | |||| ||||||||||||| |||||||||||||||    
T  20741021 ctagctctcagcaaactcctcgtttacac-taaagacctaggacctatccgtcttgacttcaacctaggaactcctagatctga 20740939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 215 - 316
Target Start/End: Complemental strand, 22252146 - 22252045
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||| |||||||||| |||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  22252146 actagtgtagtccttattcaatagctctcaacaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 22252047  T
Q  315 ct 316  Q
    ||    
T  22252046 ct 22252045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 23420666 - 23420563
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||| |||||||| || ||||||||||||||| ||||  |||||    
T  23420666 actagtgtagtccttattcaatagctctcagcaaactcctcatttacactatatgacctaggacctacccgtatagacttcaacctaggaactgttagat 23420567  T
Q  315 ctga 318  Q
    ||||    
T  23420566 ctga 23420563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 13942102 - 13941999
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| |||| |||||||||||||||||||||||  |||  ||||| |||||||| ||||| |||||||||||| |||||||||||    
T  13942102 actagtgtagtccttattctaaagttctcagcaaactcctcgtttacaacttaaaacctaggacctacccgtctacacttcaacctaggaactcctagat 13942003  T
Q  315 ctga 318  Q
    ||||    
T  13942002 ctga 13941999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 30605882 - 30605693
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || |||||||||| |||   || ||||| |||||| |||||| |||||||| ||||||       ||||||    
T  30605882 agaaagtaaagaacacagtgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaatccaggaaggaaatcc-------actagt 30605790  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||| | ||||||||||||||||||||||||||| | | |||||| ||||||||  | | || ||||| |||| |||||||||||||||    
T  30605789 gcagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccatattgatttcaatctaggaactcctagatctga 30605693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 122 - 264
Target Start/End: Complemental strand, 22131024 - 22130890
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||| | ||||| |||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||| || ||||||       |||||||    
T  22131024 agaaagtaaaaagcacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatcc-------actagtg 22130933  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacact 264  Q
    || |||||||||   ||||||||||||||||||||||||||||    
T  22130932 taatccttattctctagctctcagcaaactcctcgtttacact 22130890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 26036778 - 26036967
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgt-catctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||| |||| |||||||||||| || |||||||||| ||    || ||||| |||||| ||||||||||||||| ||||||||||||           
T  26036778 agaaagtaaacaacaaagtgagtttgttgacccagttcggtggaaaacacacctactctgggggctaccaagccaggaaggaaatccactagt------- 26036870  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || |||||||||| | |||||||||||||||| |||||||||| | | |||||| |||||||| || ||||||||||||||| ||||  |||||||||    
T  26036871 gttgtccttattctatagctctcagcaaactcatcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaacttgtagatctga 26036967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 293
Target Start/End: Complemental strand, 25105611 - 25105447
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||   || ||||  | |||| ||||||| ||||||| ||||||||||||       |    
T  25105611 gaaactaaagaacacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagt-------g 25105519  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagact 293  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||||| || ||||||    
T  25105518 tagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtatagact 25105447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 123 - 293
Target Start/End: Complemental strand, 25164704 - 25164540
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||| |||||||||||||||| ||||| || |||||||||| |||   || ||||  | |||| ||||||| ||||||| ||||||||||||       |    
T  25164704 gaaactaaagaacacagtgagcttgttgacccagttcggtgacaagcgcacctacactaggggctaccaagtcaggaaggaaatccactagt-------g 25164612  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagact 293  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||||||| |||||||| || ||||||    
T  25164611 tagtccttattcaatagctttcagcaaactcctcgtttacactatatgacctaggacctacccgtatagact 25164540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 13338560 - 13338748
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||||||||||||||||||||||||||||| |||||||||| |||   ||  |||| |||||  ||||||||||||||| ||||||||||||           
T  13338560 agaaagtaaagaacacagtgagtttgttaacccagttcggtgacaaacacacatactctggggc-taccaagccaggaaggaaatccactagt------- 13338651  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||| ||||||||| | | ||||||||||||||||||||||||| | | |||||| ||| |||| || | || ||| |||||| |||||||||||||||    
T  13338652 gtaatccttattctataactctcagcaaactcctcgtttacac-taaagacctaggacataccggtattgatttctacctaggaactcctagatctga 13338748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 133 - 318
Target Start/End: Complemental strand, 26329394 - 26329216
Alignment:
Q  133 aacacagtgagtttgttaactcagttcggtgc-aacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttat 231  Q
    ||||||||||||||||| || ||||||||||  ||   || ||||| || | | ||||||||||||||| ||||||||| ||       |||||||||||    
T  26329394 aacacagtgagtttgttgacccagttcggtgataaacacacctactctgtgagctaccaagccaggaaggaaatccactggt-------gtagtccttat 26329302  T
Q  232 tcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  26329301 tctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 26329216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 213
Target Start/End: Original strand, 11204712 - 11204781
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||||||||    
T  11204712 tttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatccactagt 11204781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 20714841 - 20714738
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| || | |||||||||||||||||||||||    | |||||| |||||||| || | || |||||||||| |||||||||||    
T  20714841 actagtgtagtccttattctaatgttctcagcaaactcctcgtttacaacacaagacctaggacctacccgtattgatttcaacctaggaactcctagat 20714742  T
Q  315 ctga 318  Q
    ||||    
T  20714741 ctga 20714738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 22184700 - 22184600
Alignment:
Q  217 tagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||| ||||||  |||| ||||||||||||||||||||||||||||| ||| |||||| |||||||| |  | || |||||||||| |||||||||||||    
T  22184700 tagtctagtccgaattctaaagctctcagcaaactcctcgtttacac-ttaagacctatgacctacccgcattgatttcaacctaggaactcctagatct 22184602  T
Q  317 ga 318  Q
    ||    
T  22184601 ga 22184600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 18221165 - 18221267
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | |||||||| |||||| ||||||||||| | | |||||| || ||||| || | || |||||||||| |||||||||||    
T  18221165 actagtgtagtccttattccatagctctcaccaaacttctcgtttacac-taaagacctaggagctaccagtattgagttcaacctaggaactcctagat 18221263  T
Q  315 ctga 318  Q
    ||||    
T  18221264 ctga 18221267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 23623932 - 23624030
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||||||| |||||| | ||||||||||||||||||| ||||||||  || ||||| |||||||| || | || |||||||||| ||||| |||||    
T  23623932 actagtgtagtcgttattctatagctctcagcaaactcctcatttacactaaat-acctaggacctacccgtattgatttcaacctaggaactcttagat 23624030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 213
Target Start/End: Complemental strand, 17661583 - 17661510
Alignment:
Q  141 gagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    |||||||||||| |||||||||| |||   || |||||||||||| ||||||||| ||||| |||| |||||||    
T  17661583 gagtttgttaacccagttcggtgacaaacacacctactatgggggctaccaagcctggaaggaaattcactagt 17661510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 318
Target Start/End: Complemental strand, 22130879 - 22130851
Alignment:
Q  290 gacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||||||||||||||||    
T  22130879 gacttcaacctagaaactcctagatctga 22130851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 29 - 101
Target Start/End: Complemental strand, 22405049 - 22404977
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaa 101  Q
    |||| ||| |||||||||||| | | ||||| |||||| | | |||||| |||||||| ||||||||||||||    
T  22405049 aataggttatgtatgatgtttcagcatttgcaatgttacgattaatgtttcaacatcatgcgataaacagaaa 22404977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 24394622 - 24394690
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccacta 211  Q
    ||||||||| || ||||||||||||||| |||| | ||||||   ||||||||||||| ||||||||||    
T  24394622 tttgttaacccatttcggtgcaacgtcacctacatctgggggcatccaagccaggaaggaaatccacta 24394690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 111; Significance: 5e-56; HSPs: 27)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 4245907 - 4246193
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| ||||||||||||| |||||||| |||||||| | |||||| |||||||||||||||| |||||||             |||||||   |||    
T  4245907 aatatgttatgtatgatgttttgacgtttgcaatgttatgattaatgtttcaacatcacgcgataagcagaaataaaaacaagaaaataaatgacaggaa 4246006  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||| ||||||| ||||||||||       ||||||    
T  4246007 agtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagacaggaaggaaatccacta-------gtgtag 4246099  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||| |||||||||||||||    
T  4246100 tccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacctgtatagacttcaacctaggaactcctagatctga 4246193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 29 - 316
Target Start/End: Original strand, 13165269 - 13165550
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| ||||||||||||||||||||||||||||||| | |||||| |||||||||||||||||||||| |             |||| ||   |||    
T  13165269 aatacgttctgtatgatgttttaacgtttgcgatgttatgattaatgttacaacatcacgcgataaacagaattaaaaacaagaaaataaaagataggaa 13165368  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    ||||||||||||| | |||||||| ||||||||||||| |||   || ||||| |||||  |||||||| |||||| ||||||||||       ||||||    
T  13165369 agtaaagaacacaataagtttgttgactcagttcggtgacaaa--cacctactgtggggc-taccaagctaggaaggaaatccacta-------gtgtag 13165458  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    ||||||||||| ||||||||||| |||||||||||||| | ||||||||| |||||||| || ||||||||||| ||| |||||||||||||    
T  13165459 tccttattcaatagctctcagcatactcctcgtttacagtatatgacctaggacctacccgtatagacttcaacataggaactcctagatct 13165550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 138 - 318
Target Start/End: Original strand, 33062370 - 33062543
Alignment:
Q  138 agtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaa 237  Q
    ||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||| ||| ||||||||||       ||||||||||||||||| |    
T  33062370 agtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagaaaggaaatccacta-------gtgtagtccttattcaata 33062462  T
Q  238 gctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||| |||||||||||||||| |||| ||||||||| ||||||||  |   ||||||||||||| |||||||||||||||    
T  33062463 gctcttagcaaactcctcgtttgcactatatgacctaggacctacccttactgacttcaacctaggaactcctagatctga 33062543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 128 - 318
Target Start/End: Complemental strand, 26972585 - 26972400
Alignment:
Q  128 taaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtc 226  Q
    ||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||| ||| ||||||||||||       ||||||    
T  26972585 taaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccagtaaggaaatccactagt-------gtagtc 26972493  T
Q  227 cttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagac-ttcaacctagaaactcctagatctga 318  Q
    ||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||| |||||||||| |||||||||||||||    
T  26972492 cttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagactttcaacctaggaactcctagatctga 26972400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 17038216 - 17038403
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||| |||||||  ||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||| || ||||||       |||||||    
T  17038216 agaaagtaaaaaacacaggaagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatcc-------actagtg 17038307  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||   ||||||||||||||||||||||||||| | | ||| || ||||||||  ||| ||||||||||||| |||||||||||||||    
T  17038308 tagtccttattctctagctctcagcaaactcctcgtttacac-taaagacataggacctacccatcttgacttcaacctaggaactcctagatctga 17038403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 14745972 - 14745784
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| ||||||| ||||||||| || ||| |||||| |||   || | ||| |||||| ||||||||||||||||||||||||||||       |    
T  14745972 gaaagtaaataacacagcgagtttgttgacccagctcggtgacaaacacaccaactctgggggctaccaagccaggaagaaaatccactagt-------g 14745880  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| ||||||||||||||| |||||||||||| |||||| | ||||||||| || ||||||||||||||| ||||| |||||||||    
T  14745879 tagtccttattcaatagctctcagcaaactactcgtttacactatatgacat-agacctacccgtatagacttcaacctaggaactcttagatctga 14745784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 11668053 - 11667864
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtgc-aacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || ||||||| ||  ||   || ||||| |||||| ||||||||||||||| |||||       |||||||    
T  11668053 agaaagtaaagaacacagtgagtttgttgacccagttcgatgagaaacacacctactctgggggctaccaagccaggaaggaaatc-------tactagt 11667961  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | ||||   |||||||| || ||||||||||||||| |||||||||||||||    
T  11667960 gtagtccttattctatagctctcagcaaactcctcgtttacac-taaagaccatggacctacccgtatagacttcaacctaggaactcctagatctga 11667864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 45599506 - 45599331
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| | |||| ||||||||||||||| ||||||       |||| |||||||| ||||||    
T  45599506 cacagtgagtttgttaactcaattcggtgcaacgtcacctactctcggggctaccaagccaggaaggaaatcc-------actaatgtagtccgtattca 45599414  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | || ||||| |||||||||| ||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  45599413 atagttctcaacaaactcctcatttgcac-taatgacctaggacctacccgtactgacttcaacctaggaactcctagatctga 45599331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 164 - 318
Target Start/End: Original strand, 17012013 - 17012160
Alignment:
Q  164 caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacac 263  Q
    |||| ||| ||||| |||||| ||||||||||||||| ||||||||||       ||||||||||||||||| |||| |||||||||||||||||| |||    
T  17012013 caacatcacctactctgggggctaccaagccaggaaggaaatccacta-------gtgtagtccttattcaacagctttcagcaaactcctcgtttgcac 17012105  T
Q  264 tttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||| |||||||||||   ||||||||||||| ||||||| |||||||    
T  17012106 tatatgacctaggacctacctgtactgacttcaacctaggaactcctggatctga 17012160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 52436997 - 52436821
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||| || |||| || ||||||||||||||||||| |||      ||||||||||||    
T  52436997 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctggaggctaccgagtcaggaagaaaatccactag-tac------agtccttattca 52436905  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||| |||| ||||||||||||  |||| |||||| || || ||||| ||   ||||||||||||| |||||||||||||||    
T  52436904 atagctttcagtaaactcctcgttcgcactatatgacataggatctacccgtactgacttcaacctaggaactcctagatctga 52436821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 40313400 - 40313225
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||| ||||||||| | |||||  ||||| ||||||||||||||| ||||||||       ||||||||||| ||||||    
T  40313400 cacagtgagtttgttaacccagttcagtgcaacgttacctactcagggggctaccaagccaggaaggaaatccac-------tagtgtagtccgtattca 40313308  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| ||| | |||||||| |||||| | ||   ||||||||||||| ||||| || ||||||    
T  40313307 atagctctcagcaaactcctcgtttgcac-taatgacctaggacctagccgtactgacttcaacctaggaactcatatatctga 40313225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 17851563 - 17851374
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||| ||||||||||||||||||| ||  ||||||||| |||   || ||||| |||||| ||| |||||| |||| ||||||||||||           
T  17851563 agaaagtatagaacacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctactaagccaagaaggaaatccactagt------- 17851471  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||| | ||||| | |||||||||| |||||||||||||||    
T  17851470 gtagtccttattctatagctctcagcaaactcctcgtttacac-taaagacctaggacctagccgtctacatttcaacctaggaactcctagatctga 17851374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 20841455 - 20841266
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||||||||||||||| |||||||||| |   ||||||||| |||   || |||||||  ||| ||||||||||||||| ||||||||||||           
T  20841455 agaaagtaaagaacacaatgagtttgttgaaatagttcggtgacaaacacacctactatatgggctaccaagccaggaaggaaatccactagt------- 20841363  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||  | |||||| |||||||||||||||||||| | | |||||| ||||||| |||  |||||||||||||| |||||||||||||||    
T  20841362 gtagtccttattttatagctcttagcaaactcctcgtttacac-taaagacctaggacctacatgtacagacttcaacctaggaactcctagatctga 20841266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 318
Target Start/End: Complemental strand, 17379790 - 17379624
Alignment:
Q  145 ttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctc 243  Q
    |||||||| |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||| ||   ||||    
T  17379790 ttgttaacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattctaatt-tctc 17379699  T
Q  244 agcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||| || || |||||| |||||||| |||| |||||||||||||||||||||||||||||    
T  17379698 agcaaactcctcgtttacaactcta-gacctaggacctacccgtcttgacttcaacctagaaactcctagatctga 17379624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 1973281 - 1973470
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||| |||||||||  ||||||||||| || |||||||||| |||   |  ||||| |||||||||||||| ||||||| ||||||||||       ||    
T  1973281 agaaaataaagaacatggtgagtttgttgacccagttcggtgacaaacactcctactctgggggataccaagtcaggaaggaaatccacta-------gt 1973373  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||| ||||||||| ||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  1973374 gtagtccttattctatagctctcagaaaactcctcatttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 1973470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 47941443 - 47941341
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | |||||| |||||||||||||||||||| | | ||| || |||||||| ||||||| |||||||||| |||||||| ||    
T  47941443 actagtgtagtccttattctatagctcttagcaaactcctcgtttacac-taaagacataggacctacccgtctagatttcaacctagtaactcctaaat 47941345  T
Q  315 ctga 318  Q
    ||||    
T  47941344 ctga 47941341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 12753116 - 12753218
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||| ||||||||||||| | |||||||||| |||||||||||||||| | | |||||| ||||||||  | | || ||||||||||||||||||||||    
T  12753116 actagcgtagtccttattctatagctctcagcgaactcctcgtttacac-taaagacctaggacctacccatattgatttcaacctagaaactcctagat 12753214  T
Q  315 ctga 318  Q
    ||||    
T  12753215 ctga 12753218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 40 - 102
Target Start/End: Original strand, 9452023 - 9452085
Alignment:
Q  40 tatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||||||||||||||| |||||| | | ||||||||||||||||||||||| |||||||    
T  9452023 tatgatgttttaacgtttgcaatgttacgattaatgttccaacatcacgcgataagcagaaat 9452085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 122 - 214
Target Start/End: Complemental strand, 20859733 - 20859640
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagtt 214  Q
    ||||||||||||||||| ||| |||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| |||||||||||||    
T  20859733 agaaagtaaagaacacaatgattttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagtt 20859640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 51472196 - 51472094
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| || | ||||| ||||||||||||||||| || || |||||| |||||||| ||||  | |||||||||| ||||||||||    
T  51472196 actagtgtagtccttattctaa-gttctcatcaaactcctcgtttacaactcta-gacctaggacctacccgtctttatttcaacctaggaactcctaga 51472099  T
Q  314 tctga 318  Q
    |||||    
T  51472098 tctga 51472094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 173 - 318
Target Start/End: Complemental strand, 23478073 - 23477936
Alignment:
Q  173 ctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacc 272  Q
    ||||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||| | ||||||||||||||  || |||||||  | | ||||    
T  23478073 ctactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattctatagctctcagcaaacaacttgtttaca-ataaagacc 23477982  T
Q  273 taagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||  ||||||| || | || |||||||||| |||||||||||||||    
T  23477981 tagaacctacccgtattgatttcaacctaggaactcctagatctga 23477936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 218 - 318
Target Start/End: Complemental strand, 17355931 - 17355832
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||||| ||   ||||||||||||||||||||||| || ||  ||||| |||||||| |||| ||||||||||||| ||||| |||||||    
T  17355931 agtgtagtccttattctaatt-tctcagcaaactcctcgtttacaactctac-acctaggacctacccgtcttgacttcaacctaggaactcatagatct 17355834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 213
Target Start/End: Complemental strand, 15804288 - 15804209
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||| |||||||||||| |||||| ||| |||   || |||||||||||| |||||||||||||||||||| |||||||    
T  15804288 cacagcgagtttgttaacccagttcagtgacaaacacacctactatgggggctaccaagccaggaagaaaattcactagt 15804209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 143 - 199
Target Start/End: Complemental strand, 49086761 - 49086704
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaa 199  Q
    |||||||||| |||||||||||||||||| |||| | |||||| ||||||||||||||    
T  49086761 gtttgttaacccagttcggtgcaacgtcacctacatgtgggggctaccaagccaggaa 49086704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 38 - 101
Target Start/End: Complemental strand, 14746060 - 14745997
Alignment:
Q  38 tgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaa 101  Q
    ||||||||||||||  |||||| |||||| | | |||||| ||| |||||||||||||||||||    
T  14746060 tgtatgatgttttagtgtttgcaatgttaagattaatgtttcaatatcacgcgataaacagaaa 14745997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 318
Target Start/End: Complemental strand, 10340221 - 10340159
Alignment:
Q  256 gtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||  ||| |||||| |||||||| ||||| | |||||||||| |||||||||||||||    
T  10340221 gtttacaacttacgacctaggacctacccgtctatatttcaacctaggaactcctagatctga 10340159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 18390184 - 18390106
Alignment:
Q  240 tctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||   |||||||  |||| ||||| |||| ||| || | ||||||||| |||||||||||||||||||    
T  18390184 tctcagcaaactcgaagtttacaacttatcacctaggaccaacccgtattgacttcaacgtagaaactcctagatctga 18390106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 107; Significance: 1e-53; HSPs: 20)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 36398985 - 36398796
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||||||| || |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||||||       |    
T  36398985 gaaagtaaagaacgcaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagccaggaaggaaatccactagt-------g 36398893  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||||    
T  36398892 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctacccgtctagacttcaacctaggaactcctagatctga 36398796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 34 - 318
Target Start/End: Original strand, 23758502 - 23758783
Alignment:
Q  34 gttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaaagtaa 130  Q
    |||||||||||||||| |  |||||| |||||| | | |||||| ||||||||||||||||||||||||             |||| ||   ||||||||    
T  23758502 gttttgtatgatgtttcagtgtttgcaatgttacgattaatgtttcaacatcacgcgataaacagaaataaaaacaagaaaataaaagacaggaaagtaa 23758601  T
Q  131 agaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtcctt 229  Q
    |||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||||||||||| ||||||||||       |||||||||||    
T  23758602 agaacacaatgagtttgttgacccagttcggtgacaaacacaactactctgggggctaccaagccaggaaggaaatccacta-------gtgtagtcctt 23758694  T
Q  230 attcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||| || ||||| ||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  23758695 attcaatagttctcaacaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 23758783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 24790349 - 24790160
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || ||||| |||||| ||||||| ||||||| |||||||||||        |    
T  24790349 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctactctgggggctaccaagtcaggaaggaaatccactaga-------g 24790257  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  24790256 tagtccttattcaatatctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 24790160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 29565994 - 29566168
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||||||||||| |||||||||  ||||| |||||  ||||||||||||||| ||||||||||       ||||||||||||||||    
T  29565994 cacagtgagtttgttaactcagttcgatgcaacgtcccctactctggggc-taccaagccaggaaggaaatccacta-------gtgtagtccttattca 29566085  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||| ||| | |||||||| |||||||| ||   |||||||||||||||||||||||||||||    
T  29566086 atagctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgacttcaacctagaaactcctagatctga 29566168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 137 - 318
Target Start/End: Original strand, 18765659 - 18765833
Alignment:
Q  137 cagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaa 236  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||| ||||||||||||||| ||||||       |||||||||||||||||||||     
T  18765659 cagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccaggaaggaaatcc-------actagtgtagtccttattcaat 18765751  T
Q  237 agctctcagcaaactcctcgtttacactttatgacctaagacctacctgt-ctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||| ||||||||||||| |||| ||||||||| ||| |||| || ||| |||||||||||| ||||| |||||||||    
T  18765752 agctctcagtaaactcctcgtttgcactatatgacctaggacttacccgtacta-acttcaacctaggaactcgtagatctga 18765833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 29 - 318
Target Start/End: Original strand, 12910361 - 12910647
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatgaga---a 125  Q
    |||||||| |||||||||||| | ||||||| |||||| | | || ||| ||||||||||||||||||||||||             ||||||| |   |    
T  12910361 aatacgttctgtatgatgtttcagcgtttgcaatgttacgattaaagtttcaacatcacgcgataaacagaaataaaaacaagaaaataaatgacagaaa 12910460  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    | |||||||||||||||||||||| || |||||||||| |||    | ||||| |||||| ||||||||||||||| |||||||| |||       ||||    
T  12910461 attaaagaacacagtgagtttgttgacccagttcggtgacaaacatacctactctgggggctaccaagccaggaaggaaatccacaagt-------gtag 12910553  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| |||| ||||||||||| ||||||||||| |||| |||| |||||||| || ||||||||||||||| |||||||||||||||    
T  12910554 tccttattcaatagctttcagcaaactcgtcgtttacactatatggcctaggacctacccgtatagacttcaacctaggaactcctagatctga 12910647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 22610861 - 22611050
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || |||| |  ||||| ||||||  |||||| ||||||||||       |||    
T  22610861 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctacaaaaggggaaaccaagaaaggaaggaaatccacta-------gtg 22610953  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  22610954 tagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 22611050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 179 - 318
Target Start/End: Complemental strand, 26860430 - 26860298
Alignment:
Q  179 tgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagac 278  Q
    |||||| ||||||||||||||| ||||||||||||       ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||    
T  26860430 tgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggac 26860338  T
Q  279 ctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||| || |||| |||||||||| |||||||||||||||    
T  26860337 ctacccgtatagatttcaacctaggaactcctagatctga 26860298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 13315141 - 13314968
Alignment:
Q  138 agtgagtttgttaactcagttcggtgcaacgtcatctactatggggga-taccaagccaggaagaaaatccactagttactagtgtagtccttattcaaa 236  Q
    ||||||||||||||| ||||||||||||| |||| ||||||||||||  ||| ||||||||||||||||||||||||       |||||||||||||||     
T  13315141 agtgagtttgttaacccagttcggtgcaatgtcacctactatggggggctactaagccaggaagaaaatccactagt-------gtagtccttattcaag 13315049  T
Q  237 agctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||| ||| | |||||||| |||||||| ||   |||||||| | || |||||||||||||||    
T  13315048 agctctcagcaaactcctcgtttgcac-taatgacctaggacctacccgtactgacttcaatcaaggaactcctagatctga 13314968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 15328299 - 15328419
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctc 243  Q
    ||||||||| ||||||||||||| || | ||||| |||||| |||||||||| |||| ||||||| ||||       ||||||||||||||||||||||     
T  15328299 tttgttaacccagttcggtgcaatgttacctactctgggggctaccaagccaagaaggaaatccattagt-------gtagtccttattcaaaagctcta 15328391  T
Q  244 agcaaactcctcgtttacactttatgac 271  Q
    |||||||||||| |||||||||||||||    
T  15328392 agcaaactcctcatttacactttatgac 15328419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 173 - 318
Target Start/End: Complemental strand, 19466662 - 19466525
Alignment:
Q  173 ctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacc 272  Q
    ||||| |||||| ||||||||||||||| ||||||||||||       ||||||||||||| | ||||||||| ||||||||| ||||||| | | ||||    
T  19466662 ctactctgggggctaccaagccaggaaggaaatccactagt-------gtagtccttattctatagctctcagaaaactcctcatttacac-taaagacc 19466571  T
Q  273 taagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || |||||||| || |  | |||||||||| |||||||||||||||    
T  19466570 taggacctacccgtattaatttcaacctaggaactcctagatctga 19466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 24317293 - 24317191
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| || | ||||| ||||||||||||||||| || || |||||| |||||||| || | |||||||| |||| ||||||||||    
T  24317293 actagtgtagtccttattctaa-gttctcaacaaactcctcgtttacaactcta-gacctaggacctacccgtattgacttcaaactaggaactcctaga 24317196  T
Q  314 tctga 318  Q
    |||||    
T  24317195 tctga 24317191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 20476657 - 20476579
Alignment:
Q  240 tctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||  |||||||  |||| ||||| |||||||| || | ||||||||||||||||||| |||||||||    
T  20476657 tctcagcaaactccaagtttacaacttatcacctaggacctacccgtattgacttcaacctagaaactcttagatctga 20476579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 217 - 318
Target Start/End: Complemental strand, 21250299 - 21250200
Alignment:
Q  217 tagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||| |||||  |||| |||||| ||||  | ||||||||  ||| |||||| |||||||| |||||||||||||||||| | |||||||||||    
T  21250299 tagtgtagtcgttattttaaagttctcagtaaac--cacgtttacaacttaagacctaggacctacccgtctagacttcaacctaggatctcctagatct 21250202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 215 - 316
Target Start/End: Original strand, 31587530 - 31587630
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| || | ||||||||||||||  ||||||| || || |||||| ||||||| ||| | ||||||||||||| ||||||||||    
T  31587530 actagtgtagtccttattctaa-gttctcagcaaactccaagtttacaactcta-gacctaggacctacatgtattgacttcaacctaggaactcctaga 31587627  T
Q  314 tct 316  Q
    |||    
T  31587628 tct 31587630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 27107565 - 27107663
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||| |||||||||||||| || | ||||||||||||||  |||||||  ||| |||||| |||||||| ||   ||||||||||||| |||||||||||    
T  27107565 actattgtagtccttattctaa-gttctcagcaaactccaagtttacaacttaagacctaggacctacccgtactgacttcaacctaggaactcctagat 27107663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 318
Target Start/End: Complemental strand, 20475356 - 20475278
Alignment:
Q  240 tctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||  |||||||  |||| ||||| |||||||| || | ||||||||||||| | |||||||||||||    
T  20475356 tctcagcaaactccaagtttacaacttatcacctaggacctacccgtattgacttcaacctaggagctcctagatctga 20475278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 179 - 317
Target Start/End: Complemental strand, 24317943 - 24317813
Alignment:
Q  179 tgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaaga 277  Q
    |||||| ||||||||||||||| ||||||||||||       ||||||||||||| || | ||||||||||||||| ||||| | || || |||||| ||    
T  24317943 tgggggttaccaagccaggaaggaaatccactagt-------gtagtccttattctaa-gttctcagcaaactcctggtttataactcta-gacctagga 24317853  T
Q  278 cctacctgtctagacttcaacctagaaactcctagatctg 317  Q
    ||||||  | | ||||||||||||| || |||||||||||    
T  24317852 cctacccatattgacttcaacctaggaagtcctagatctg 24317813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 27111134 - 27111236
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| || | |||||||||||| |  |||||||  ||| || ||| |||||||| ||    |||||||||||| |||||||||||    
T  27111134 actagtgtagtccttattctaa-gttctcagcaaacttcaagtttacaacttaagaactaggacctacccgtacttacttcaacctaggaactcctagat 27111232  T
Q  315 ctga 318  Q
    ||||    
T  27111233 ctga 27111236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 215 - 261
Target Start/End: Original strand, 21530440 - 21530486
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttac 261  Q
    ||||||||||| ||||||| | ||||||||||||| |||||||||||    
T  21530440 actagtgtagttcttattctatagctctcagcaaattcctcgtttac 21530486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 100; Significance: 2e-49; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 40303 - 40492
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || |||||| ||| ||||  || ||||| |||||| |||||||| |||||| ||||||||||       ||    
T  40303 agaaagtaaagaacacagtgagtttgttgacccagttcagtgacaaca-cacctactctgggggctaccaagctaggaaggaaatccacta-------gt 40394  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| || |||| |||||||||| |||||||||||||||    
T  40395 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaggacctaccagtatagaattcaacctaggaactcctagatctga 40492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0143 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 36279 - 36454
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| |||||||||||  |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||       ||||||||||||||||    
T  36279 cacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccacta-------gtgtagtccttattca 36371  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||| ||||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  36372 aaagctctcagcaaacttctcgtttgcac-taatgacctaggacctaccggtactgacttcaacctaggaactcctagatctga 36454  T

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Target: chr8 (Bit Score: 90; Significance: 2e-43; HSPs: 35)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 33466337 - 33466162
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| |||||||||||  |||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||       ||||||||||||||    
T  33466337 cacagagagtttgttaatccagttcggtgcaacgtcacctactctgggggctaccaagccaggaagaaaatccactagt-------gtagtccttattca 33466245  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||| ||||||| ||| | |||||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  33466244 aaagctctcagcaaacttctcgtttgcac-taatgacctaggacctaccggtactgacttcaacctaggaactcctagatctga 33466162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 17279870 - 17280045
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| |||||||||||| |||||||||||||||||| ||||| |||||||||||||||||||||| ||||||       ||||||||||| | ||||||    
T  17279870 cacagagagtttgttaacccagttcggtgcaacgtcacctactctgggggataccaagccaggaaggaaatcc-------actagtgtagttcgtattca 17279962  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||||| |||||||||||||||| ||| | |||||||| ||||||||  |   ||||||||||||| |||| ||||||||||    
T  17279963 atagctctaagcaaactcctcgtttgcac-taatgacctaggacctacccatactgacttcaacctaggaacttctagatctga 17280045  T

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Target: chr8; HSP #3
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 22476285 - 22476384
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||||||||  | ||||||||||||||| |||||||||||    
T  22476285 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccatatagacttcaacctaggaactcctagat 22476384  T

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Target: chr8; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 23541699 - 23541412
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgtt-atgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---ga 124  Q
    |||| ||| |||||||||||||||||||||| ||||| | | ||||||||||||||||||||||||| |||||||             |||||||   ||    
T  23541699 aatatgttatgtatgatgttttaacgtttgcaatgtttacgatcaatgttccaacatcacgcgataagcagaaataaaaacaagaaaataaatgacagga 23541600  T
Q  125 aagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgta 223  Q
    | |||||||||||| |||||||||| ||  ||||||||| |||   || ||||| |||||| |||||| || ||||| ||||||||||||       |||    
T  23541599 atgtaaagaacacaatgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccgggaaggaaatccactagt-------gta 23541507  T
Q  224 gtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||||||||| ||||||||||||||||  |||||||||| ||| ||||| |||||||  || |||| |||||||||| |||||||||||||||    
T  23541506 gtacttattcaatagctctcagcaaactcgccgtttacactatattacctaggacctactcgtatagaattcaacctaggaactcctagatctga 23541412  T

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Target: chr8; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 24091925 - 24092114
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| ||  ||||||||| |||   || ||||| | |||| ||||||||||||||| ||||||||||       ||    
T  24091925 agaaagtaaagaacacagtgagtttgttgacctagttcggtgacaaacacacctactctaggggctaccaagccaggaaggaaatccacta-------gt 24092017  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  24092018 gtagtccttattctacagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 24092114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 218 - 317
Target Start/End: Original strand, 25240463 - 25240562
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctg 317  Q
    |||||||||||||||||||||||||||||||||||||  ||||||||||| |||||| |||||||| |||||||||||||||||  ||||||||||||||    
T  25240463 agtgtagtccttattcaaaagctctcagcaaactccttctttacactttacgacctaggacctacccgtctagacttcaacctaagaactcctagatctg 25240562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 141 - 318
Target Start/End: Complemental strand, 37155697 - 37155527
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||||| | |||||||||  ||||||| ||||| |||||| ||||||||||||||| |||| |||||||       ||| ||||||||||| ||||    
T  37155697 gagtttgttagcccagttcggtataacgtcacctactctgggggctaccaagccaggaaggaaattcactagt-------gtaatccttattcaatagct 37155605  T
Q  241 ctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||| |||| ||||||||| |||||||| ||   ||||||||||||| |||||| ||||||||    
T  37155604 ctcagcaaactcctcgtttgcactatatgacctaggacctacccgtactgacttcaacctaggaactccaagatctga 37155527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 17880917 - 17880741
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatggggga-taccaagccaggaagaaaatccactagttactagtgtagtccttattc 233  Q
    |||||||||||||||||| |||||||||||||||||| ||||| ||||||  |||||||||| |||| ||||||||||||       ||||| |||||||    
T  17880917 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctggggggctaccaagccaagaaggaaatccactagt-------gtagttcttattc 17880825  T
Q  234 aaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || ||||||||||||||||||||||| ||| | |||||||| || | ||| ||   ||||||||||||| |||||||||||||||    
T  17880824 aatagctctcagcaaactcctcgtttgcac-taatgacctaggaacgacccgtactgacttcaacctaggaactcctagatctga 17880741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 34 - 318
Target Start/End: Complemental strand, 11221549 - 11221274
Alignment:
Q  34 gttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaaagtaa 130  Q
    |||||||| ||||||| ||||||| | |||||  ||||||||||||||||||| |  ||||||||||||             |||||||   ||||||||    
T  11221549 gttttgtacgatgtttaaacgttttcaatgttccgttcaatgttccaacatcatgaaataaacagaaataaaaacaagaaaataaatgacaggaaagtaa 11221450  T
Q  131 agaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtcctt 229  Q
    ||||||||||||||||||| ||  ||||||||| |||   || ||||| |||||| |||||| |||||||| ||||            ||||||||||||    
T  11221449 agaacacagtgagtttgttgacctagttcggtgacaaacacacctactctgggggctaccaaaccaggaaggaaat------------agtgtagtcctt 11221362  T
Q  230 attcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||| | ||||||||||||||||||||||||||| | | |||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  11221361 attctatagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgtatagacttcaacctaggaactcctagatctga 11221274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 135 - 318
Target Start/End: Original strand, 39080947 - 39081122
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    ||||| ||||||||||||||||| |  |||||||||| ||||| |||||| ||||||||||||||| ||||||       ||||||||||||||||||||    
T  39080947 cacagagagtttgttaactcagtacaatgcaacgtcacctactctgggggctaccaagccaggaaggaaatcc-------actagtgtagtccttattca 39081039  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | |||||||| |||||||||| ||| ||| | ||||||||  ||||||| ||   ||||||||||||| |||| ||||||||||    
T  39081040 atagctctcaacaaactcctcatttgcac-taatgacctagaacctacccgtactgacttcaacctaggaactactagatctga 39081122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 22485188 - 22485291
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||  || | || ||||||||||||||  |||||||||||    
T  22485188 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggaattatccgtatagacttcaacctaagaactcctagat 22485287  T
Q  315 ctga 318  Q
    ||||    
T  22485288 ctga 22485291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 162 - 318
Target Start/End: Original strand, 8726853 - 8727001
Alignment:
Q  162 tgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttac 261  Q
    |||||||||| ||||| |||||| ||||||||||||||| ||||||||||       ||||||||| ||||||| ||||||||||||||||||||||| |    
T  8726853 tgcaacgtcacctactctgggggctaccaagccaggaaggaaatccacta-------gtgtagtccatattcaatagctctcagcaaactcctcgtttgc 8726945  T
Q  262 actttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    || | | |||||| |||||||| ||   ||||||||||||  |||||||||||||||    
T  8726946 ac-taacgacctaggacctacccgtaatgacttcaacctatgaactcctagatctga 8727001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 143 - 318
Target Start/End: Complemental strand, 23864637 - 23864469
Alignment:
Q  143 gtttgttaactcagttcggtgcaacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    |||| ||||| || || |||||||| ||| |||| | |||||||||||||| ||||||||||||||||||||       ||||||||||||| || | ||    
T  23864637 gttttttaacccaatttggtgcaacatcacctacatctgggggataccaagtcaggaagaaaatccactagt-------gtagtccttattctaa-gttc 23864546  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||| ||||| ||   |||||| |||||||| || | ||||||||||||| |||||||||||||||    
T  23864545 tcagcaaactcctcgcttacaattctagacctaggacctacccgttttgacttcaacctaggaactcctagatctga 23864469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 33977026 - 33977215
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    ||||||||||||| || ||||||||||| || |||||||||  |||   || ||||| |||||| ||||||| ||| ||| ||||||||||       ||    
T  33977026 agaaagtaaagaatactgtgagtttgttgacccagttcggtaacaaacgcacctactctgggggctaccaagtcagaaaggaaatccacta-------gt 33977118  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||| | |||||||||||||||||| |||||||| | | ||||||  ||||||| || || ||||||| |||| |||||||||||||||    
T  33977119 gtagtccttattctatagctctcagcaaactccttgtttacac-taaagacctagaacctacccgtatatacttcaatctaggaactcctagatctga 33977215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 12814696 - 12814598
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| || | ||||||||||||||||||||||| || || |||||| |||||||| |||| ||| ||||||||||||||||||||    
T  12814696 actagtgtagtccttattctaa-gttctcagcaaactcctcgtttacaactgta-gacctaggacctacccgtcttgacgtcaacctagaaactcctaga 12814599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 142 - 318
Target Start/End: Complemental strand, 20255054 - 20254877
Alignment:
Q  142 agtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||| || |||||||||| |||   ||| ||||||||||| |||||||| |||||| ||||||||||||       || |||||||||| |||| |    
T  20255054 agtttgttgacccagttcggtgacaaacacatgtactatgggggctaccaagctaggaaggaaatccactagt-------gtggtccttattctaaagtt 20254962  T
Q  241 ctcagcaaactcctcgtttacactt-------tatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||||||||||  |       || ||| || |||||||| |||||||||||||||||| |||||||||||||||    
T  20254961 ctcagcaaactcctcgtttacaactgaagacctaggacgtaggacctacccgtctagacttcaacctaggaactcctagatctga 20254877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 13660475 - 13660374
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||  |||||||| || ||||||||||||||| |||||||||||    
T  13660475 actagtgtagtctttattctaa-gctctcagcaaactcctcgtttactctaaa-gacctgggacctacccgtatagacttcaacctaggaactcctagat 13660378  T
Q  315 ctga 318  Q
    ||||    
T  13660377 ctga 13660374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 13719118 - 13719017
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||||||||| |||||| || |||||||||||||||||||||||| ||  | |||||  |||||||| || ||||||||||||||| |||||||||||    
T  13719118 actagtgtagtctttattctaa-gctctcagcaaactcctcgtttactctaaa-gacctgggacctacccgtatagacttcaacctaggaactcctagat 13719021  T
Q  315 ctga 318  Q
    ||||    
T  13719020 ctga 13719017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 29 - 100
Target Start/End: Original strand, 22472654 - 22472725
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaa 100  Q
    |||||||| ||||||||||||||||||||||||||||| | | |||||| ||||||||| ||||||||||||    
T  22472654 aatacgttctgtatgatgttttaacgtttgcgatgttacgattaatgtttcaacatcacacgataaacagaa 22472725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 215 - 300
Target Start/End: Original strand, 22874233 - 22874317
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacct 300  Q
    ||||||||||||||||||||||||||||||||||||||||| ||| ||| | |||||||| |||||||| ||   |||||||||||    
T  22874233 actagtgtagtccttattcaaaagctctcagcaaactcctcatttgcac-taatgacctaggacctacccgtactgacttcaacct 22874317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 221 - 314
Target Start/End: Original strand, 45136176 - 45136268
Alignment:
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||||| |||||| | ||||||||||||||||||| ||||||||  | |||||| |||||||| || ||||||||||||||| |||||||||||    
T  45136176 gtagtcattattcgatagctctcagcaaactcctcatttacactaaa-gacctaggacctacccgtatagacttcaacctaggaactcctagat 45136268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 141 - 318
Target Start/End: Original strand, 23249722 - 23249892
Alignment:
Q  141 gagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagct 240  Q
    |||||||||||| || ||||||||||||||| ||||| |||||| |||||||||| |||| ||||||||||||       ||||||||||||  ||   |    
T  23249722 gagtttgttaacccaattcggtgcaacgtcacctactctgggggctaccaagccaagaaggaaatccactagt-------gtagtccttattataagttt 23249814  T
Q  241 ctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     ||| ||||||| | |||| || || || |||||| |||| |||||| | ||||||||||||| |||||||||||||||    
T  23249815 atcaacaaactcattgtttgcaactcta-gacctaggaccaacctgtattgacttcaacctaggaactcctagatctga 23249892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 9996554 - 9996656
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    |||| |||||||||||||| | ||||||||||||||||||| ||||||| | | |||||| |||||||| || | || |||||||||| ||||||||| |    
T  9996554 actattgtagtccttattctatagctctcagcaaactcctcatttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctaggt 9996652  T
Q  315 ctga 318  Q
    ||||    
T  9996653 ctga 9996656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 29 - 95
Target Start/End: Complemental strand, 22481000 - 22480934
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaa 95  Q
    |||| |||||||||||| |||||||||||||||||||| | | |||||| |||||||||||||||||    
T  22481000 aatatgttttgtatgatattttaacgtttgcgatgttacgattaatgtttcaacatcacgcgataaa 22480934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 43 - 213
Target Start/End: Original strand, 45133550 - 45133724
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatg---agaaagtaaagaacacag 139  Q
    ||||||||||| ||||| ||||| |||||||||||| ||||||| |||||||||||||||             |||| |   ||||||||||| |||||     
T  45133550 gatgttttaacatttgcaatgttctgttcaatgttctaacatcatgcgataaacagaaataaaaacaagaaaataaacgacaagaaagtaaaggacacat 45133649  T
Q  140 tgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    |||||||||| || |||||||||| |||   || ||||| |||||| || |||||||||||| ||||||||||||    
T  45133650 tgagtttgttgacccagttcggtgacaaacacacctactctgggggctatcaagccaggaaggaaatccactagt 45133724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 215 - 318
Target Start/End: Complemental strand, 27925550 - 27925448
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||| | |||||||| |||||||| | |||||||   | ||| || |||||||| || ||||||||| ||||| |||||||||||    
T  27925550 actagtgtagtccttattctatagctctcaacaaactccacatttacac-caaagacataggacctacccgtatagacttcatcctaggaactcctagat 27925452  T
Q  315 ctga 318  Q
    ||||    
T  27925451 ctga 27925448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 142 - 318
Target Start/End: Original strand, 1683966 - 1684132
Alignment:
Q  142 agtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctc 241  Q
    ||||||||||| || ||||||||||||||| ||||| ||| |  ||||||||||||| |||| |||||||       |||||||||||||||   | |||    
T  1683966 agtttgttaacccaattcggtgcaacgtcacctactctggcgc-taccaagccaggaggaaa-tccacta-------gtgtagtccttattctctaactc 1684056  T
Q  242 tcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     ||||||||||||||||||||| | | |||||| | | |||| |||| ||||||||||||  ||||||||| |||||    
T  1684057 ccagcaaactcctcgtttacac-taaagacctaggtcatacccgtcttgacttcaacctaagaactcctagttctga 1684132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 174 - 302
Target Start/End: Original strand, 24384582 - 24384702
Alignment:
Q  174 tactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacct 273  Q
    |||| |||||| ||||||||||||||||||||||       |||||||||||||||||||  ||| ||||||||||||||  |||||||  ||| |||||    
T  24384582 tactctgggggctaccaagccaggaagaaaatcc-------actagtgtagtccttattc-taagttctcagcaaactccaagtttacaacttaagacct 24384673  T
Q  274 aagacctacctgtctagacttcaacctag 302  Q
    | | |||||| ||   |||||||||||||    
T  24384674 agggcctacccgtagtgacttcaacctag 24384702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 24091844 - 24091917
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||| ||| |||| ||||||| |||||||   ||||| ||||||||||||||||||||||  ||||||||||||    
T  24091844 aatatgttctgtaagatgtttcaacgtttataatgttctgttcaatgttccaacatcacgaaataaacagaaat 24091917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 213
Target Start/End: Original strand, 33961729 - 33961821
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggt-gcaacgtcatctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    |||||||||||||||| ||||||||||| || |||||||||  |||  ||| ||||| |||||| ||||| | ||||||| ||||| ||||||    
T  33961729 agaaagtaaagaacactgtgagtttgttgacccagttcggtaacaaactcacctactctgggggctaccacgtcaggaaggaaatcaactagt 33961821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 43 - 102
Target Start/End: Complemental strand, 27925696 - 27925637
Alignment:
Q  43 gatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    ||||||||||||| ||| |||||  |||||||||| ||||||||||  ||||||||||||    
T  27925696 gatgttttaacgtatgcaatgtttcgttcaatgtttcaacatcacgaaataaacagaaat 27925637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 123 - 160
Target Start/End: Complemental strand, 27925613 - 27925576
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcg 160  Q
    ||||||||||||||||||||||||||| || |||||||    
T  27925613 gaaagtaaagaacacagtgagtttgttgacccagttcg 27925576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 29 - 102
Target Start/End: Original strand, 33976930 - 33977003
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||| |||||||| ||||||| ||  ||||  |||||  |||||||||||||||||||||  ||||||||||||    
T  33976930 aatatgttttgtaagatgtttcaatatttgtaatgttccgttcaatgttccaacatcacgaaataaacagaaat 33977003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 173 - 213
Target Start/End: Complemental strand, 1562506 - 1562466
Alignment:
Q  173 ctactatgggggataccaagccaggaagaaaatccactagt 213  Q
    ||||| |||||| ||||||||||||||| ||||||||||||    
T  1562506 ctactttgggggctaccaagccaggaaggaaatccactagt 1562466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 22485112 - 22485152
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg 163  Q
    |||||||||||||||| |||||||||| || ||||||||||    
T  22485112 gaaagtaaagaacacaatgagtttgttgacccagttcggtg 22485152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0190 (Bit Score: 86; Significance: 4e-41; HSPs: 1)
Name: scaffold0190
Description:

Target: scaffold0190; HSP #1
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 122 - 316
Target Start/End: Complemental strand, 16816 - 16628
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||   || |||||  ||||| ||||||||||| ||| |||||||||| |           
T  16816 agaaagtaaagaacacagtgagtttgttgactcagttcggtgacaaacacacctactccgggggctaccaagccagaaaggaaatccactact------- 16724  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatct 316  Q
    |||||||||||||||||||| | |||||||||||| |||||||||||||||||| |||||||| || ||||||||||||||| |||||||| ||||    
T  16723 gtagtccttattcaaaagctataagcaaactcctcatttacactttatgacctaggacctacccgtatagacttcaacctaggaactcctatatct 16628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 84; Significance: 7e-40; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 87704 - 87893
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctac-tatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||| |||||||||| || |||||||||| |||   || |||| |||||||| | |||||| |||||| ||||||||||       ||    
T  87704 gaaagtaaagaacacaatgagtttgttgacccagttcggtgacaaacacacctacgtatgggggct-ccaagctaggaaggaaatccacta-------gt 87795  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| ||||||||||||||| || |||||||||||||||    
T  87796 gtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtctagacttcaacccaggaactcctagatctga 87893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 83; Significance: 3e-39; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 123 - 318
Target Start/End: Original strand, 36975 - 37163
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| || |||||||||| |||   || ||||| ||| || ||||||||||||||| ||||||||||       |||    
T  36975 gaaagtaaa-aacacaatgagtttgttgacccagttcggtgacaaacacacctactctggaggctaccaagccaggaaggaaatccacta-------gtg 37066  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| |||||||||||||||||||||||||||  ||||||||| |||||||| || ||||||||||||||| |||||||||||||||    
T  37067 tagtccttattcaatagctctcagcaaactcctcgtttacaccatatgacctaggacctacccgtatagacttcaacctaggaactcctagatctga 37163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0328 (Bit Score: 79; Significance: 7e-37; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 138 - 318
Target Start/End: Complemental strand, 17147 - 16974
Alignment:
Q  138 agtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaa 237  Q
    ||||||||||||||| |||||||||||||||||| |||||||||||   ||||| |||||||| ||||||||||||       ||||||||||||||| |    
T  17147 agtgagtttgttaacccagttcggtgcaacgtcacctactatggggctaaccaatccaggaaggaaatccactagt-------gtagtccttattcaata 17055  T
Q  238 gctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||| |||||||||||||| |||| |||||||||  ||| ||| ||   ||||||||||||| |||||||||||||||    
T  17054 gctctcaacaaactcctcgtttgcactatatgacctagtacccacccgtactgacttcaacctaggaactcctagatctga 16974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 76; Significance: 4e-35; HSPs: 2)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 215 - 314
Target Start/End: Complemental strand, 110361 - 110262
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||| |||||||| || ||||||||||||||| |||||||||||    
T  110361 actagtgtagtccttattcaatagctctcagcaaactcctcgtttacactatatgacctaggacctacccgtatagacttcaacctaggaactcctagat 110262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 110545 - 110472
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||| |||||||||||| | || |||| |||||| | | |||||| ||||||||| ||||||||||||||    
T  110545 aatacgttatgtatgatgtttcagcgattgcaatgttacgattaatgtttcaacatcactcgataaacagaaat 110472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 25961 - 25675
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||||||| |||||||||||| | ||||||| ||| || | | |||||| ||||||||||||||||||| ||||             |||||||   |||    
T  25961 aatacgttctgtatgatgtttcagcgtttgcaatgctacgattaatgtttcaacatcacgcgataaacataaataaaaacaagaaaataaatgacaggaa 25862  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||| |||||| ||||||| || || |||||||||| |||   || ||||| |||| | ||||||||||||||| ||||||||| ||       ||||    
T  25861 agtaaataacacaatgagtttattgacccagttcggtgacaaacacacctactctgggagctaccaagccaggaaggaaatccactggt-------gtag 25769  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||||| |||||||| |||||||||||||||||||  |||||||| |||||||| || ||||||||||||||  |||||||||||||||    
T  25768 tccttattcaatagctctcaacaaactcctcgtttacactagatgacctaggacctacccgtatagacttcaacctacgaactcctagatctga 25675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 75; Significance: 2e-34; HSPs: 3)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 61663 - 61475
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| | |||| |||||||||| || |||||||||| |||   ||| |||| |||||| |||||||||| |||| ||||||||||||       |    
T  61663 gaaagtaaatagcacaatgagtttgttgacccagttcggtgacaaacacat-tactctgggggctaccaagccaagaaggaaatccactagt-------g 61572  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||| ||||||||| |||||||||||||||| | ||||||||| |||||||||||||||||| || ||||||||||||||| |||||||||||||||    
T  61571 tagttcttattcaatagctctcagcaaactcattgtttacactatatgacctaagacctacccgtatagacttcaacctaggaactcctagatctga 61475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #2
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 123 - 281
Target Start/End: Complemental strand, 50282 - 50130
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    ||||||||| |||||| |||||||||| || |||||||||| |||   || ||||| | |||| ||||||| ||||||| ||||||||||||       |    
T  50282 gaaagtaaataacacaatgagtttgttgacccagttcggtgacaaacacacctactctaggggctaccaagtcaggaaggaaatccactagt-------g 50190  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagaccta 281  Q
    |||||||||||||| |||||||| |||| |||||||||||||| ||||||||| ||||||    
T  50189 tagtccttattcaatagctctcaacaaaatcctcgtttacactatatgacctacgaccta 50130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 29 - 102
Target Start/End: Complemental strand, 50380 - 50307
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaat 102  Q
    |||||||| |||||||||||    ||||||| |||||| | | |||||| ||||||||||||||||||||||||    
T  50380 aatacgttctgtatgatgttaaggcgtttgcaatgttacgattaatgtttcaacatcacgcgataaacagaaat 50307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 38 - 318
Target Start/End: Complemental strand, 17556 - 17280
Alignment:
Q  38 tgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaaagtaaagaa 134  Q
    |||| ||||||||||||||||| |||||  |||||||||| ||| ||||||||||||||| ||||             |||||||   ||||||||| ||    
T  17556 tgtacgatgttttaacgtttgcaatgttcagttcaatgtttcaaaatcacgcgataaacaaaaataaaatcaataaaataaatgacaagaaagtaaaaaa 17457  T
Q  135 cacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattc 233  Q
    ||||||||||||||| || |||||  ||| |||   || ||||| |||||| ||||||| ||||||||||||||||||||       |||||||||||||    
T  17456 cacagtgagtttgttgacccagtttcgtgacaaacacacctactctgggggctaccaagtcaggaagaaaatccactagt-------gtagtccttattc 17364  T
Q  234 aaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     | ||||||||||||| |||||||| |||||  | |||||| |||||||| || ||||||||||||||||||||| |||||||||    
T  17363 tatagctctcagcaaattcctcgttaacactaaa-gacctaggacctacccgtatagacttcaacctagaaactcttagatctga 17280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 135 - 318
Target Start/End: Complemental strand, 53102 - 52929
Alignment:
Q  135 cacagtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattca 234  Q
    |||||||||||||||||| |||||||||||||||||| ||||| |||||| |||||||||||| || ||||||       |||||||||||||||||||     
T  53102 cacagtgagtttgttaacccagttcggtgcaacgtcacctactctgggggctaccaagccagg-aggaaatcc-------actagtgtagtccttattct 53011  T
Q  235 aaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    | ||||||||||||||||||||||||||| | | |||||| |||||||| || | |  |||||||||| |||||||||||||||    
T  53010 atagctctcagcaaactcctcgtttacac-taaagacctaggacctacccgt-ttggtttcaacctaggaactcctagatctga 52929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0185 (Bit Score: 71; Significance: 4e-32; HSPs: 1)
Name: scaffold0185
Description:

Target: scaffold0185; HSP #1
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 123 - 318
Target Start/End: Complemental strand, 2549 - 2360
Alignment:
Q  123 gaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtg 221  Q
    |||||||||||||||| |||||||||| || || ||||||| |||   || ||||| | |||| || |||||||||||| || |||| ||||       |    
T  2549 gaaagtaaagaacacaatgagtttgttgacccatttcggtgacaagcacacctactttaggggctatcaagccaggaaggaagtccaatagt-------g 2457  T
Q  222 tagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||||||||| |||||| | || ||||||||||||||| |||||||||||||||    
T  2456 tagtccttattcaatagctctcagcaaactccccgtttacactatatgacctaggacctagccgtatagacttcaacctaggaactcctagatctga 2360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0088 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 36647 - 36750
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||| ||||||||| ||||||||||| || ||||||| |||| |||||| ||||    
T  36647 actagtgtagtccttattcaatagctctcaacaaactcctcgtttacactatatgacctaggacctacctgtatatacttcaaactaggaactcccagat 36746  T
Q  315 ctga 318  Q
    ||||    
T  36747 ctga 36750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0226
Description:

Target: scaffold0226; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 29 - 318
Target Start/End: Complemental strand, 7827 - 7542
Alignment:
Q  29 aatacgttttgtatgatgttttaacgtttgcgatgttatgttcaatgttccaacatcacgcgataaacagaaatnnnnnnnnnnnnntaaatga---gaa 125  Q
    |||| ||| |||| |||| |||||||||||| |||| |||||||||||||||| |||||| |||||||||||||             ||||| |   |||    
T  7827 aatatgttctgtaagatgatttaacgtttgcaatgtcatgttcaatgttccaatatcacgagataaacagaaataaaaacaagaaaataaattacaagaa 7728  T
Q  126 agtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtag 224  Q
    |||||||||||||||||||||||| ||  ||||||||| |||   ||  |||| | |||| ||||||||||||||| |||| |||||||       ||||    
T  7727 agtaaagaacacagtgagtttgttgacctagttcggtgacaaacacacttactctaggggctaccaagccaggaaggaaattcactagt-------gtag 7635  T
Q  225 tccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||||| | |||||||| |||||||||| ||||||| | | |||||| ||||||||  | ||||||||||||||| |||||||||||||||    
T  7634 tccttattctatagctctcaacaaactcctcatttacac-taaagacctaggacctacccatatagacttcaacctaggaactcctagatctga 7542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 18318 - 18129
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatggggga-taccaagccaggaagaaaatccactagttactag 219  Q
    ||||||||||||||| |||||||||||| ||  ||||||||| |||   || ||||| ||||||  ||| |||||| |||| ||||||||||||          
T  18318 agaaagtaaagaacatagtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagt------ 18225  T
Q  220 tgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     ||||||||||||| | |||||||||||||||||||| |||||| | | || ||| |||||||| || ||||||||||||||| |||||||||||||||    
T  18224 -gtagtccttattctatagctctcagcaaactcctcgattacac-taaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctga 18129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0226; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 122 - 318
Target Start/End: Complemental strand, 27712 - 27523
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatggggga-taccaagccaggaagaaaatccactagttactag 219  Q
    ||||||||||||||| |||||||||||| ||  ||||||||| |||   || ||||| ||||||  ||| |||||| |||| ||||||||||||          
T  27712 agaaagtaaagaacatagtgagtttgttgacctagttcggtgacaaacacacctactctggggggctacgaagccaagaaggaaatccactagt------ 27619  T
Q  220 tgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
     ||||||||||||| | |||||||||||||||||||| |||||| | | || ||| |||||||| || ||||||||||||||| |||||||||||||||    
T  27618 -gtagtccttattctatagctctcagcaaactcctcgattacac-taaaga-ctaggacctacccgtatagacttcaacctaggaactcctagatctga 27523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 67; Significance: 1e-29; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 138 - 318
Target Start/End: Original strand, 103090 - 103262
Alignment:
Q  138 agtgagtttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagtgtagtccttattcaaaa 237  Q
    ||||||||||||||| |||||| ||||||||||| ||||| | |||| ||||||||||||||| ||||||       ||||||||||||||||||||| |    
T  103090 agtgagtttgttaacccagttcagtgcaacgtcacctactctaggggctaccaagccaggaaggaaatcc-------actagtgtagtccttattcaata 103182  T
Q  238 gctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||| ||||||||||| |||| |||   | |||||| |||||||| ||   ||||||||||||| |||||||||||||||    
T  103183 gctctgagcaaactccttgtttgcac-caaagacctaggacctacccgtactgacttcaacctaggaactcctagatctga 103262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 64; Significance: 6e-28; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 122 - 318
Target Start/End: Original strand, 26372 - 26561
Alignment:
Q  122 agaaagtaaagaacacagtgagtttgttaactcagttcggtg-caacgtcatctactatgggggataccaagccaggaagaaaatccactagttactagt 220  Q
    |||||||||||||||||||||||||||| || || ||||||| |||   || |||||||||||| |||||||| |||||| ||||||       ||||||    
T  26372 agaaagtaaagaacacagtgagtttgttgacccaattcggtgacaaacacacctactatgggggctaccaagcaaggaaggaaatcc-------actagt 26464  T
Q  221 gtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    |||||||||||||   |||||||| |||||||||| ||||||| | | |||||| |||||||| || | || |||||||||| |||||||||||||||    
T  26465 gtagtccttattctgtagctctcaacaaactcctcatttacac-taaagacctaggacctacccgtattgatttcaacctaggaactcctagatctga 26561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0035 (Bit Score: 57; Significance: 9e-24; HSPs: 1)
Name: scaffold0035
Description:

Target: scaffold0035; HSP #1
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 37420 - 37520
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagac-ttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| |||| |||||||||||||||| ||||||  ||| |||||| |||||||| |||||||| |||||||||| ||||||||||    
T  37420 actagtgtagtccttattctaaagttctcagcaaactcctcatttacaacttaagacctaggacctacccgtctagactttcaacctaggaactcctaga 37519  T
Q  314 t 314  Q
    |    
T  37520 t 37520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 218 - 274
Target Start/End: Original strand, 5703 - 5759
Alignment:
Q  218 agtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgaccta 274  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||| |||||||||    
T  5703 agtgtagtccttattcaatagctctcagcaaactcatcgtttacactatatgaccta 5759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 215 - 318
Target Start/End: Original strand, 5473 - 5575
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttaca-ctttatgacctaagacctacctgtctagacttcaacctagaaactcctaga 313  Q
    ||||||||||||||||||| || | ||| ||||||||||  ||||||| || || |||||| ||| |||||||||  |||||||||||| ||||||||||    
T  5473 actagtgtagtccttattccaa-gttctgagcaaactccaagtttacaactcta-gacctaggacttacctgtcttaacttcaacctaggaactcctaga 5570  T
Q  314 tctga 318  Q
    |||||    
T  5571 tctga 5575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 277 - 318
Target Start/End: Complemental strand, 12553 - 12512
Alignment:
Q  277 acctacctgtctagacttcaacctagaaactcctagatctga 318  Q
    ||||||| || |||||||||||||||||||||||||||||||    
T  12553 acctacccgtatagacttcaacctagaaactcctagatctga 12512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0072 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0072
Description:

Target: scaffold0072; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 144 - 211
Target Start/End: Original strand, 18540 - 18607
Alignment:
Q  144 tttgttaactcagttcggtgcaacgtcatctactatgggggataccaagccaggaagaaaatccacta 211  Q
    |||||| || |||||||||||||| ||| ||||| | |||| |||||||||| |||| ||||||||||    
T  18540 tttgttgacccagttcggtgcaacttcacctacttttggggctaccaagccatgaaggaaatccacta 18607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 215 - 314
Target Start/End: Original strand, 3177 - 3273
Alignment:
Q  215 actagtgtagtccttattcaaaagctctcagcaaactcctcgtttacactttatgacctaagacctacctgtctagacttcaacctagaaactcctagat 314  Q
    ||||||||||| | ||||||| |||||||||||||  || ||||| ||| | |||||||| |||||||| ||   || |||||||||| |||||||||||    
T  3177 actagtgtagtacgtattcaacagctctcagcaaa--ccacgtttgcac-taatgacctaggacctacccgtactgatttcaacctaggaactcctagat 3273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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