View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8492_low_17 (Length: 282)
Name: NF8492_low_17
Description: NF8492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8492_low_17 |
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Alignment Details
Target: chr3 (Bit Score: 205; Significance: 1e-112; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 18 - 234
Target Start/End: Complemental strand, 7931215 - 7930999
Alignment:
| Q |
18 |
ttaagctttctacttgtggtgaaaatttggaagaaaagaggttgataaggtcatcatcaatggctggagagatgggaaattggtgttcctttgtgccatc |
117 |
Q |
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| T |
7931215 |
ttaagctttctacttgtggtgaaaatttggaagaaaagaggttgataaggtcatcatcaatggctggagagatggaaaattggtgttcctttgtgccatc |
7931116 |
T |
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| Q |
118 |
tttagagagatcttgctctcttccaattgatagtggaaagataatgttgctagagaggcagagaagtgtggcagattcagagctacatggtaacttttgt |
217 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
7931115 |
tttagagagatcttgctctcttccaattgatagtggaaagataatgttgctagagagacagagaagtgtggcagattcagagctacatggtaacttttgt |
7931016 |
T |
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| Q |
218 |
ttattcagcagtattat |
234 |
Q |
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|||||||||| |||||| |
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| T |
7931015 |
ttattcagcaatattat |
7930999 |
T |
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