View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8492_low_21 (Length: 238)
Name: NF8492_low_21
Description: NF8492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8492_low_21 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 16 - 238
Target Start/End: Original strand, 40750198 - 40750420
Alignment:
| Q |
16 |
tcaacaagaagcagtactaatccttccatttttagtggaagttttggtgtaatgagttcatcctctacacaaacaacgagtttaaacaaaaaccatgatg |
115 |
Q |
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| T |
40750198 |
tcaacaagaagcagtactaatccttccatatttagtggaagttttggtgtaatgagttcatcctctacacaaacaacgagtttaaacaaaaaccatgatg |
40750297 |
T |
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| Q |
116 |
aggttaatatggtcattaatcagaaaatgaagcagcatgagaattttgatccaagtagtagtagaagtgcaactatggttggtaattctagtgggtttag |
215 |
Q |
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| T |
40750298 |
aggttaatatggtcattaatcagaaaatgaagcagcatgagaattttgatccaagtagtagtagaagtgcaactatggttggtaattctagtgggtttag |
40750397 |
T |
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| Q |
216 |
agattttcttggagtgagtaacc |
238 |
Q |
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||||||||||||||||||||||| |
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| T |
40750398 |
agattttcttggagtgagtaacc |
40750420 |
T |
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