View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8492_low_9 (Length: 364)
Name: NF8492_low_9
Description: NF8492
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8492_low_9 |
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Alignment Details
Target: chr7 (Bit Score: 305; Significance: 1e-171; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 305; E-Value: 1e-171
Query Start/End: Original strand, 16 - 349
Target Start/End: Original strand, 31260425 - 31260758
Alignment:
| Q |
16 |
atgggtctacgtcagaaagatctatcaggnnnnnnngataatattaaaaataaaaattcaacgtagatcatccatcacacacacttgtacactttatgca |
115 |
Q |
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| T |
31260425 |
atgggtctacgtcagaaagatctatcaggtttttttgataatattaaaaataaaaattcaacgtagatcatccatcacacacacttgtacactttatgca |
31260524 |
T |
|
| Q |
116 |
gttaaaccttcactcataataataaatacagcccactacattgtaaatgcagttatccaccactacttttctatacagtcaacattttgttttttccact |
215 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
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| T |
31260525 |
gttaaaccttcactcataataataaatacagcccactacattgtaaatgcagttatccaccactactattctatacagtcaacattttgttttttccact |
31260624 |
T |
|
| Q |
216 |
catactcatactcataataataatcatgcatttctcccataaatgcataaaaaggcgtttctgagcttatttgatgtctacaaaaagggtgatccagagt |
315 |
Q |
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|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31260625 |
catactcataatcataataataatcatgcatttctcccataaatgcataaaaaggcgtttctgagcttatttgatgtctacaaaaagggtgatccagagt |
31260724 |
T |
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| Q |
316 |
ggacctagatcgacagtaggagttgtggaagtat |
349 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
31260725 |
ggacctagatcgacagtaggagttgtggaagtat |
31260758 |
T |
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