View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8493_low_28 (Length: 252)
Name: NF8493_low_28
Description: NF8493
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8493_low_28 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 103; Significance: 2e-51; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 95 - 249
Target Start/End: Original strand, 44974136 - 44974290
Alignment:
| Q |
95 |
atttctttgagtgatccaaaccttgtagcatgcatataacattaaatttgtttgatatttgaaaaatgnnnnnnnngacaaaatttgatacttggaaaat |
194 |
Q |
| |
|
||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| ||||||||| |
|
|
| T |
44974136 |
atttctttgagtgatccaaaccttgtagcatacatataaaattaaatttgtttgatatttgaaaaatgttttttt-gacaaaatttgatagttggaaaat |
44974234 |
T |
|
| Q |
195 |
aatgaattaagtattctggtaaga-tttaatttctatggtttgtgggatctaatgt |
249 |
Q |
| |
|
||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| |
|
|
| T |
44974235 |
aatgaattaagtattctagtaagattttaatttctatggtttgtgggatctaatgt |
44974290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University