View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8497_low_10 (Length: 250)

Name: NF8497_low_10
Description: NF8497
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8497_low_10
NF8497_low_10
[»] chr5 (25 HSPs)
chr5 (1-239)||(38452554-38452793)
chr5 (29-237)||(38220590-38220797)
chr5 (1-235)||(38182249-38182483)
chr5 (1-235)||(38188648-38188882)
chr5 (1-235)||(38209475-38209709)
chr5 (1-239)||(38170117-38170356)
chr5 (1-235)||(38215873-38216107)
chr5 (1-237)||(38185906-38186141)
chr5 (1-237)||(38212216-38212451)
chr5 (1-237)||(38156205-38156438)
chr5 (1-139)||(38220235-38220373)
chr5 (29-139)||(38220372-38220482)
chr5 (29-139)||(38220481-38220591)
chr5 (159-234)||(38443919-38443991)
chr5 (38-92)||(38443718-38443772)
chr5 (1-89)||(38443765-38443853)
chr5 (38-93)||(38170070-38170125)
chr5 (38-93)||(38220188-38220243)
chr5 (38-93)||(38452785-38452840)
chr5 (57-93)||(38182475-38182511)
chr5 (57-93)||(38185878-38185914)
chr5 (57-93)||(38188620-38188656)
chr5 (57-93)||(38209701-38209737)
chr5 (57-93)||(38212443-38212479)
chr5 (57-93)||(38215845-38215881)


Alignment Details
Target: chr5 (Bit Score: 196; Significance: 1e-107; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 196; E-Value: 1e-107
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 38452793 - 38452554
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    ||||||||||||||||||||||||||||||| |||| |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||    
T  38452793 ttctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactacatgtcgtgaatgatgaattcgaagatattctaaaatcgttttg 38452694  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaa-ttttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttt 199  Q
    |||||||||||||||||| ||||||||||||| |||| |||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  38452693 gaagcgttgctttttgaagcctaatgtagttctctaattttttttttgaagtgtagttaaattgtacggattcaaattgattaatatattggttcttttt 38452594  T
Q  200 tatcatggatttgtctcctatatttcttgcacttatctct 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38452593 tatcatggatttgtctcctatatttcttgcacttatctct 38452554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 29 - 237
Target Start/End: Original strand, 38220590 - 38220797
Alignment:
Q  29 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220590 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220689  T
Q  129 gttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctcctatatttcttg 228  Q
    |||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  38220690 gttctctaattttcttttgaagtgtagtc-aattgtacggattcaaattgattaatatattggttctattttatcatggatttgtctcctatatttcttg 38220788  T
Q  229 cacttatct 237  Q
    |||||||||    
T  38220789 cacttatct 38220797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 38182483 - 38182249
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38182483 ttctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaatcgttttg 38182384  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38182383 gaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38182284  T
Q  201 atcatggatttgtctcctatatttcttgcacttat 235  Q
    |||||||||||||||||||||||||||||||||||    
T  38182283 atcatggatttgtctcctatatttcttgcacttat 38182249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 38188648 - 38188882
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38188648 ttctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaatcgttttg 38188747  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38188748 gaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38188847  T
Q  201 atcatggatttgtctcctatatttcttgcacttat 235  Q
    |||||||||||||||||||||||||||||||||||    
T  38188848 atcatggatttgtctcctatatttcttgcacttat 38188882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 167; E-Value: 1e-89
Query Start/End: Original strand, 1 - 235
Target Start/End: Complemental strand, 38209709 - 38209475
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||||||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38209709 ttctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaatcgttttg 38209610  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38209609 gaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38209510  T
Q  201 atcatggatttgtctcctatatttcttgcacttat 235  Q
    |||||||||||||||||||||||||||||||||||    
T  38209509 atcatggatttgtctcctatatttcttgcacttat 38209475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 164; E-Value: 9e-88
Query Start/End: Original strand, 1 - 239
Target Start/End: Original strand, 38170117 - 38170356
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    ||||||||||||||||||||||||||||||| |||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38170117 ttctaaaattgtatttgacgtgcaatttttccaaggtgaaggattttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttg 38170216  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcact-aattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttcttttt 199  Q
    ||||| ||||||||||||  |||||||||||| || ||       |||||||||||| |||||||||||||||||||||||||||||||||||||| |||    
T  38170217 gaagcattgctttttgaaggctaatgtagttctctaaaaaaaaaattgaagtgtagttaaattgtacggattcaaattgattaatatattggttctattt 38170316  T
Q  200 tatcatggatttgtctcctatatttcttgcacttatctct 239  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  38170317 tatcatggatttgtctcctatatttcttgcacttatctct 38170356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 38215873 - 38216107
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||| ||||| |||||| ||||| ||||||||||||||||| |||||||| ||||||||||||||||| |||||    
T  38215873 ttctaaaattatatttgaagcgcaatttttttaaggtgaaggactttcaaggactgcatgtcgtgaacgatgaatttgaagatattctaaaatcgttttg 38215972  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| |||||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38215973 gaagcgttgctttttgaagcctaatatagttttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38216072  T
Q  201 atcatggatttgtctcctatatttcttgcacttat 235  Q
    |||||||||||||||||||||||||||||||||||    
T  38216073 atcatggatttgtctcctatatttcttgcacttat 38216107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 38185906 - 38186141
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  |||||    
T  38185906 ttctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattctaaaattgttttg 38186004  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38186005 gaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38186104  T
Q  201 atcatggatttgtctcctatatttcttgcacttatct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  38186105 atcatggatttgtctcctatatttcttgcacttatct 38186141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 157; E-Value: 1e-83
Query Start/End: Original strand, 1 - 237
Target Start/End: Complemental strand, 38212451 - 38212216
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||| | ||||||||||||||| |||||| |||||||||||| |||||||||| |||||||| ||||||||||||||||  |||||    
T  38212451 ttctaaaattatatttgaagcgcaatttttctaaggtgaaggactttcacggactg-atgtcgtgaacgatgaatttgaagatattctaaaattgttttg 38212353  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| |||||| || ||  |||| ||| |||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||    
T  38212352 gaagcgttgctttttgaagcctaatataattttctaaattttttttgaagtgtagttaaattgtacggattcaaattgattaatacattggttctttttt 38212253  T
Q  201 atcatggatttgtctcctatatttcttgcacttatct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  38212252 atcatggatttgtctcctatatttcttgcacttatct 38212216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 237
Target Start/End: Original strand, 38156205 - 38156438
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||||| ||||| | ||||||||||||||  |||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||| |||||    
T  38156205 ttctaaaattgtttttgaagcgcaatttttctaagaagaaggaatttcatggacttcatgttgtgaatgatgaattcgaagatattctaaaatcgttttg 38156304  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaattttcttttgaagtgtagtcaaattgtacggattcaaattgattaatatattggttctttttt 200  Q
    |||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||   | ||||| ||||||||| || |||||||||||||| |||||    
T  38156305 gaagcgttgctttttgaagcctaatgtagttctctaatttttttttgaagtgtagt--tactgtacagattcaaatcgagtaatatattggttc-ttttt 38156401  T
Q  201 atcatggatttgtctcctatatttcttgcacttatct 237  Q
    |||||||||||||||||||||||||||||||||||||    
T  38156402 atcatggatttgtctcctatatttcttgcacttatct 38156438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 139
Target Start/End: Original strand, 38220235 - 38220373
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttg 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  38220235 ttctaaaattttatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttg 38220334  T
Q  101 gaagcgttgctttttgaaacctaatgtagttcactaatt 139  Q
    |||| ||||||||||||||||||||||||||| ||||||    
T  38220335 gaagtgttgctttttgaaacctaatgtagttctctaatt 38220373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 38220372 - 38220482
Alignment:
Q  29 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220372 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcgttttggaagtgttgctttttgaaacctaatgta 38220471  T
Q  129 gttcactaatt 139  Q
    |||| ||||||    
T  38220472 gttctctaatt 38220482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 29 - 139
Target Start/End: Original strand, 38220481 - 38220591
Alignment:
Q  29 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatctttttggaagcgttgctttttgaaacctaatgta 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||    
T  38220481 ttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaatcattttggaagtgttgctttttgaaacctaatgta 38220580  T
Q  129 gttcactaatt 139  Q
    |||| ||||||    
T  38220581 gttctctaatt 38220591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 159 - 234
Target Start/End: Original strand, 38443919 - 38443991
Alignment:
Q  159 aattgtacggattcaaattgattaatatattggttcttttttatcatggatttgtctcctatatttcttgcactta 234  Q
    ||||||| ||||||||||| |||||||||||||||   ||||||||||||| |||||| |||||||||| ||||||    
T  38443919 aattgtatggattcaaatttattaatatattggtt---ttttatcatggatctgtctcatatatttcttccactta 38443991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 38 - 92
Target Start/End: Original strand, 38443718 - 38443772
Alignment:
Q  38 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaa 92  Q
    |||| ||||||| ||||||||| |||||||||||||||| |||||||||||||||    
T  38443718 gaagcaatttcatggactgcatatcgtgaatgatgaatttgaagatattctaaaa 38443772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 89
Target Start/End: Original strand, 38443765 - 38443853
Alignment:
Q  1 ttctaaaattgtatttgacgtgcaatttttctaaggcgaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattcta 89  Q
    |||||||| ||| ||||| | | |||||||| |||  |||||||||||| ||||| ||  ||||||| |||||||||||||||||||||    
T  38443765 ttctaaaactgtttttgaagcgtaatttttcaaagaagaaggaatttcatggactacacatcgtgaacgatgaattcgaagatattcta 38443853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 38170070 - 38170125
Alignment:
Q  38 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    |||| |||||| |||||| ||||| |||||||||||||| ||||||||||||||||    
T  38170070 gaagaaatttcgcggactacatgttgtgaatgatgaatttgaagatattctaaaat 38170125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Original strand, 38220188 - 38220243
Alignment:
Q  38 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38220188 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38220243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 38 - 93
Target Start/End: Complemental strand, 38452840 - 38452785
Alignment:
Q  38 gaaggaatttcacggactgcatgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    |||| |||||| |||||| |||||  ||||||||||||| ||||||||||||||||    
T  38452840 gaagaaatttcgcggactacatgttatgaatgatgaatttgaagatattctaaaat 38452785  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 38182511 - 38182475
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38182511 catgttgtgaatgatgaatttgaagatattctaaaat 38182475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 38185878 - 38185914
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38185878 catgttgtgaatgatgaatttgaagatattctaaaat 38185914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 38188620 - 38188656
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38188620 catgttgtgaatgatgaatttgaagatattctaaaat 38188656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 38209737 - 38209701
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38209737 catgttgtgaatgatgaatttgaagatattctaaaat 38209701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Complemental strand, 38212479 - 38212443
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38212479 catgttgtgaatgatgaatttgaagatattctaaaat 38212443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 57 - 93
Target Start/End: Original strand, 38215845 - 38215881
Alignment:
Q  57 catgtcgtgaatgatgaattcgaagatattctaaaat 93  Q
    ||||| |||||||||||||| ||||||||||||||||    
T  38215845 catgttgtgaatgatgaatttgaagatattctaaaat 38215881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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