View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8499_high_19 (Length: 253)
Name: NF8499_high_19
Description: NF8499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8499_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 133; Significance: 3e-69; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 95 - 251
Target Start/End: Complemental strand, 2911904 - 2911753
Alignment:
| Q |
95 |
ttttggtacctatgggatgctaccacctatcattctcttctctctattttctttcttaatctcaactttatagtactatactacatatcatatttatgga |
194 |
Q |
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| T |
2911904 |
ttttggtacctatgggatgctaccacctatcattctcttctctctattttctttcttaatctcaactttatagtactatgcta-----catatttatgga |
2911810 |
T |
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| Q |
195 |
tggattttggagtatatagtatacaataatgtaagaattaaataataaagtcttcat |
251 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2911809 |
tggattttggagtatatagtatacaataatgtaagaattaaataataaagtcttcat |
2911753 |
T |
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