View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8499_low_18 (Length: 285)
Name: NF8499_low_18
Description: NF8499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8499_low_18 |
 | |
|
| [»] chr6 (31 HSPs) |
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| [»] chr5 (2 HSPs) |
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| [»] chr8 (3 HSPs) |
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| [»] chr7 (1 HSPs) |
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| [»] scaffold0288 (1 HSPs) |
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| [»] chr3 (1 HSPs) |
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| [»] scaffold0477 (1 HSPs) |
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| [»] scaffold0199 (1 HSPs) |
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| [»] scaffold0475 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 261; Significance: 1e-145; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 9 - 285
Target Start/End: Complemental strand, 4575018 - 4574742
Alignment:
| Q |
9 |
ttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatcttt |
108 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4575018 |
ttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatcttt |
4574919 |
T |
|
| Q |
109 |
ggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaa |
208 |
Q |
| |
|
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4574918 |
ggaaagaagatactaaatgtcttgaatggattgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaa |
4574819 |
T |
|
| Q |
209 |
gctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574818 |
gctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
4574742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 221; E-Value: 1e-121
Query Start/End: Original strand, 9 - 285
Target Start/End: Complemental strand, 4561214 - 4560939
Alignment:
| Q |
9 |
ttctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatcttt |
108 |
Q |
| |
|
||||||||| |||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||| |||||||| |
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|
| T |
4561214 |
ttctattctatgttcccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatcacttgacatctttagactgtaatcttt |
4561115 |
T |
|
| Q |
109 |
ggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaa |
208 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| |||||| |
|
|
| T |
4561114 |
ggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttaagtctcaagagaa |
4561015 |
T |
|
| Q |
209 |
gctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|| | ||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||| |
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|
| T |
4561014 |
gc-cttagagtttgcttggggtttggccaacagcaagaaaccatttttatggatcattaggcctgatcttgtcattg |
4560939 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 4489792 - 4490053
Alignment:
| Q |
24 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
123 |
Q |
| |
|
|||||| ||||||||||||| ||||| |||||||| || |||||| |||| ||||| |||||| ||||||||||||||||||||||||||||||||||| |
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|
| T |
4489792 |
ccttctgtatacacaattggcccattttcttcttttttagatcaaattccagaaaatcacttgaaatctttagactctaatctttggaaagaagatacta |
4489891 |
T |
|
| Q |
124 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |
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|
| T |
4489892 |
aatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctattagagtttgc |
4489991 |
T |
|
| Q |
224 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4489992 |
atggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgttattg |
4490053 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 190; E-Value: 1e-103
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 4503834 - 4504095
Alignment:
| Q |
24 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
123 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
4503834 |
ccttctctatacacaattggtccattagcttcttttgtaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
4503933 |
T |
|
| Q |
124 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
223 |
Q |
| |
|
|||||||||| |||||||||| |||||||||| ||||||||||||||||||||||||||||||| || ||||||||| ||| || | |||||||||| |
|
|
| T |
4503934 |
aatgtcttgattggcttgaattaaaagaaccaggatctgttgtttatgtaaattttggcagcattacagttatgtcttaagataaattgttagagtttgc |
4504033 |
T |
|
| Q |
224 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||||||||| ||||| ||||| ||||||||||| ||||||||||||||||| |||| |
|
|
| T |
4504034 |
ttggggtttggccaatagcaagaaaccttttttgtggattattaggcctgatcttgttattg |
4504095 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 4266589 - 4266864
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||||| | || |||||||| |
|
|
| T |
4266589 |
tctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctttaaattccaatctttg |
4266688 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
4266689 |
gaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggtagcatcacagttatgtcacgagagaag |
4266788 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||| ||||||||||||||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||| |
|
|
| T |
4266789 |
ctcttagagtttgcttggggtttggccaacagcaagaacccttttttgtggataattaggcctgatcttgtcattg |
4266864 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 10 - 285
Target Start/End: Complemental strand, 4481402 - 4481127
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| | || |||||||||||||| ||||||||||| ||||||||| ||||||||||||||||| || ||||| | | ||||||||||||||||| |
|
|
| T |
4481402 |
tctattctatattcccttctctatacaccattggtccattggcttcttttttaaatcaaagtccacaatatcacttggaaacattagactctaatctttg |
4481303 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||| |||||| |
|
|
| T |
4481302 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtttatgtaaattttggcagcatcacaattatgtctcaagagaaa |
4481203 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||| ||||||||||||||||||| ||||| ||||||||| |||||||||||| |||||| || |||||||||||| |
|
|
| T |
4481202 |
ctcttagagtttgcttggggttttgccaatagcaaaaaaaactttttgtggattattaggtctaatcttgtcattg |
4481127 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 24 - 285
Target Start/End: Complemental strand, 3172436 - 3172175
Alignment:
| Q |
24 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
123 |
Q |
| |
|
||||||||||||||||||||||| || ||||| ||| ||| ||||||||| |||||| ||||| |||||||||| ||||||||||||||||||||||||| |
|
|
| T |
3172436 |
ccttctctatacacaattggtccgttcgcttcgtttttaagtcaaagtccgcaaaatcacttggcatctttagattctaatctttggaaagaagatacta |
3172337 |
T |
|
| Q |
124 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
223 |
Q |
| |
|
|||||||||||||||||||| |||||||| ||| |||||||||||||||||||||||||||||||| |||||||||| |||||| | |||||||||| |
|
|
| T |
3172336 |
aatgtcttgaatggcttgaaacaaaagaatcaaaatctgttgtttatgtaaattttggcagcatcatagttatgtctcaagagaaattattagagtttgc |
3172237 |
T |
|
| Q |
224 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||| ||||||||||| ||||||||||||||||| |||||||||||||||||||||| |
|
|
| T |
3172236 |
ttggggtttagccaacagcaagaaaccctttttgtggattattaggcctgatcttgtcattg |
3172175 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 10 - 285
Target Start/End: Complemental strand, 4458304 - 4458028
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||||| | || |||||||| |
|
|
| T |
4458304 |
tctactctatgttcccttctatatacaccattggcccatttgcttcttttataaatcaaagtccacaaaatcacttggcatctttaaattccaatctttg |
4458205 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
||||||| |||||||||||||||| |||||||||||||||||||||| |||||| |||||||||||||||| |||||||| |||||||||| ||||||| |
|
|
| T |
4458204 |
gaaagaatatactaaatgtcttgagtggcttgaatcaaaagaaccaaagtctgttatttatgtaaattttggaagcatcacagttatgtctcaagagaag |
4458105 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaa-aaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||| |||| |||||||||| ||||||||||||||| |||||| ||||||||||| | |||||||||||||||||||| |
|
|
| T |
4458104 |
ctcttagaatttgcttgggttttggccaacagcaagaaaaccttttttgtggataactaggcctgatcttgtcattg |
4458028 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 24 - 285
Target Start/End: Complemental strand, 4461818 - 4461557
Alignment:
| Q |
24 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
123 |
Q |
| |
|
|||||||||||||| ||||||||| | |||||||| |||||||||||||||||||| || || |||||||| | || |||||||||||||||||||||| |
|
|
| T |
4461818 |
ccttctctatacaccattggtccactttcttcttttataaatcaaagtccacaaaatcacctggcatctttaaattccaatctttggaaagaagatacta |
4461719 |
T |
|
| Q |
124 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
223 |
Q |
| |
|
|||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||| |||||| ||| || | || |||||||||| |
|
|
| T |
4461718 |
aatgtcttgaatggcttgaatcaaaagaaccaggatctgttgtctatgtaaattttggcagcatcacagttatgactcctgatcaactgttagagtttgc |
4461619 |
T |
|
| Q |
224 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4461618 |
ttggggtttggctgatagcaagaaaccctttttatggatcattaggcctgatcttgtcattg |
4461557 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 24 - 285
Target Start/End: Original strand, 4514558 - 4514819
Alignment:
| Q |
24 |
ccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatacta |
123 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||| ||| | |||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||| |
|
|
| T |
4514558 |
ccttctctatacaccattggcccatttgcttcgtttttgaatcaaagtccacaaaatcacttggaatctttaggttccaatctttggaaagaagatacta |
4514657 |
T |
|
| Q |
124 |
aatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgc |
223 |
Q |
| |
|
||||||||||||||||||||||||||||| || |||||||||||||||| |||||||| |||||||| ||||||||| ||||| | |||||||||| |
|
|
| T |
4514658 |
aatgtcttgaatggcttgaatcaaaagaatcaggatctgttgtttatgttaattttggtagcatcacgattatgtctccggagaaattgttagagtttgc |
4514757 |
T |
|
| Q |
224 |
ttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||||||||| ||||| ||| ||||||| |||||||||||||||||||||||||||| |
|
|
| T |
4514758 |
ttggggtttggccaatagcaagaaaacctttttatggatcattaggcctgatcttgtcattg |
4514819 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 10 - 285
Target Start/End: Complemental strand, 4470512 - 4470237
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| | || |||||||||||| | ||||||||| | |||||||| |||||||||||||||||||| | | |||||||| | | |||||||| |
|
|
| T |
4470512 |
tctattctatattcccttctctatacgccattggtccactttcttcttttttaaatcaaagtccacaaaatcatctagcatctttaaatttcaatctttg |
4470413 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||||||||||| |||||| |||| |||||||||| |||||| |
|
|
| T |
4470412 |
gaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaggatctgttgtctatgtaaatttcggcagcgtcacagttatgtctccagagaaa |
4470313 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|| |||||||||||||||||||||| || ||||| ||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4470312 |
ctgttagagtttgcttggggtttggcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcattg |
4470237 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 285
Target Start/End: Complemental strand, 4506557 - 4506291
Alignment:
| Q |
19 |
tgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaaga |
118 |
Q |
| |
|
||||||||||||||||||| ||||| || ||| |||| ||| |||||||||||||||||||| | || || ||||||| || |||||||||||||| || |
|
|
| T |
4506557 |
tgtttccttctctatacactattggccctttaacttcatttgtaaatcaaagtccacaaaatcagtttgcaactttagattcaaatctttggaaagagga |
4506458 |
T |
|
| Q |
119 |
tactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagag |
218 |
Q |
| |
|
|||||||||||| |||||||| |||||||||||||| |||||||||||||| |||||||| |||||||| ||||||||| ||||| | ||||| |
|
|
| T |
4506457 |
tactaaatgtctcgaatggctggaatcaaaagaaccggcttctgttgtttatgtgaattttggaagcatcacaattatgtctccggagaaatttttagag |
4506358 |
T |
|
| Q |
219 |
tttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||| |||| |
|
|
| T |
4506357 |
tttgcttggggtttggccaatagcaagaaaccctttttgtggatcattaggcctgatcttgtaattg |
4506291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 39 - 285
Target Start/End: Complemental strand, 4598851 - 4598605
Alignment:
| Q |
39 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
138 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||| |||||| | ||| ||||||||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4598851 |
attggccctttatcttcgtttttaaatcaaagtcaacaaaagcatttggcatctttaggtaccaatctttggaaagaagataccaagtgtcttgactggc |
4598752 |
T |
|
| Q |
139 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
238 |
Q |
| |
|
||||||| || |||||||| |||||||||||||| |||||||| ||||| || || ||| || ||| ||| | |||| |||||||||||||||||||| |
|
|
| T |
4598751 |
ttgaatccaatgaaccaaggtctgttgtttatgtgaattttgggagcataacggtgatgactgcagaaaagttgttagactttgcttggggtttggccaa |
4598652 |
T |
|
| Q |
239 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4598651 |
tagcaagaaaccctttttgtggatcattaggcctgatcttgtcattg |
4598605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 4299244 - 4299519
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| ||||| |||||||| || |||||||| |
|
|
| T |
4299244 |
tctattctatgttcccttctttatatactattggacctttaccttcattattaaatcaaactccacataatcacttggaatctttaggttccaatctttg |
4299343 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||| ||||||||||||||||||||||| || || || |||| ||||||||||| |||||||||||| | || |||||| ||| |||| | |
|
|
| T |
4299344 |
gaaagaagataccaaatgtcttgaatggcttgaatccaaggagccgggatcggttgtttatgtgaattttggcagcgttacagttatgactccagagcaa |
4299443 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|| ||||| ||||||||||||||||||| ||| ||||| |||||||||||||||||||| || |||||||||| |
|
|
| T |
4299444 |
ctgttagagattgcttggggtttggccaattgcaggaaaccatttttgtggatcattaggccagaccttgtcattg |
4299519 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 63 - 285
Target Start/End: Complemental strand, 4516977 - 4516755
Alignment:
| Q |
63 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
162 |
Q |
| |
|
||||||||||| |||||| ||||| | ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||| || |||| | | |||| |
|
|
| T |
4516977 |
aatcaaagtccgcaaaataacttggcttctataggttctaatctttggaaagaagatatgaaatgtcttgaatggcttgaatctaaggaacaaggttctg |
4516878 |
T |
|
| Q |
163 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggat |
262 |
Q |
| |
|
| |||||||| |||||||| |||||||| || ||| ||| ||| | || ||||||| ||||||||||||||||||||||| ||||| ||||||||||| |
|
|
| T |
4516877 |
tagtttatgtgaattttggaagcatcacggtcatgactccagatcaactgttagagttcgcttggggtttggccaacagcaagaaaccttttttgtggat |
4516778 |
T |
|
| Q |
263 |
cattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||||| |||||||||| |
|
|
| T |
4516777 |
tattaggcctgaccttgtcattg |
4516755 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 39 - 285
Target Start/End: Original strand, 4613170 - 4613416
Alignment:
| Q |
39 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
138 |
Q |
| |
|
|||||||| ||| |||| || ||| |||||||||||||||| ||||| || |||| | |||||||||||||||||||| || |||||||| |||| |
|
|
| T |
4613170 |
attggtcctttatcttcacttttaagtcaaagtccacaaaatcacttggcaagtttaagtaccaatctttggaaagaagataccaagtgtcttgattggc |
4613269 |
T |
|
| Q |
139 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
238 |
Q |
| |
|
||||||| || ||||| | || ||||||||||| |||||||| ||||| || |||||| || ||| || || |||||||||||||||||||||| || |
|
|
| T |
4613270 |
ttgaatccaaggaaccgaagtccgttgtttatgtgaattttgggagcatgaccgttatgactgcagaaaaactattagagtttgcttggggtttggcgaa |
4613369 |
T |
|
| Q |
239 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||| ||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4613370 |
tagcaagcaaccctttttgtggatcattaggcctgatcttgtcattg |
4613416 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 63 - 285
Target Start/End: Complemental strand, 4626607 - 4626385
Alignment:
| Q |
63 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctg |
162 |
Q |
| |
|
|||| |||||||||||| | |||| |||||||| || ||||||||||||||||| || || ||||||||||||||||||| || ||||||| |||| |
|
|
| T |
4626607 |
aatcgaagtccacaaaaccagttgatatctttaggttccaatctttggaaagaagacaccaattgtcttgaatggcttgaattcaaggaaccaaagtctg |
4626508 |
T |
|
| Q |
163 |
ttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggat |
262 |
Q |
| |
|
|||||||||| || ||||||||| | | |||||| ||| | |||| || |||||||||||||||||||||| | ||||| ||||||||||||||||| |
|
|
| T |
4626507 |
ttgtttatgtgaactttggcagcgttatagttatgactccacagaaactgttagagtttgcttggggtttggctgatagcaagaaaccctttttgtggat |
4626408 |
T |
|
| Q |
263 |
cattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||||||||||||| |||| |
|
|
| T |
4626407 |
cattaggcctgatcttgtgattg |
4626385 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 10 - 274
Target Start/End: Original strand, 4259577 - 4259841
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| |||| |||||| |||| | ||||| || ||| |||| || ||||||||| |||||| ||| || || |||| |||| || |||||||| |
|
|
| T |
4259577 |
tctattctatgttcccttctttatatgctattggacctttaccttcattattaaatcaaactccacataatcacctggcatcgttaggttccaatctttg |
4259676 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||| |||||||||||||||||||||| || ||||| ||||||||||| || |||||||||||||| || |||||| ||| ||| | |
|
|
| T |
4259677 |
gaaagaagataccaaatgtcttgaatggcttgaatttaaggaacctgagtctgttgtttacgtgaattttggcagcattacagttatgactccagatcaa |
4259776 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctga |
274 |
Q |
| |
|
| |||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4259777 |
tttttagagtttgcttggggattggccaatagcaagaaaccctttttgtggatcattaggcctga |
4259841 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 61 - 285
Target Start/End: Original strand, 4256098 - 4256322
Alignment:
| Q |
61 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
160 |
Q |
| |
|
||||||||| |||||| | | ||||| |||| |||| || |||||||||||||||||||| || |||||||||||||||||||| || ||||| || |
|
|
| T |
4256098 |
taaatcaaactccacatagtcacttggcatcgttaggttccaatctttggaaagaagataccaagtgtcttgaatggcttgaatccaaggaacctgagtc |
4256197 |
T |
|
| Q |
161 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
260 |
Q |
| |
|
||||||||| || |||||||||||||| || |||||| ||| ||| | || |||||||||||||||| |||||||| ||||| ||||| |||||||| |
|
|
| T |
4256198 |
tgttgtttacgtgaattttggcagcattacagttatgactccagatcaactgttagagtttgcttggggattggccaatagcaagaaaccatttttgtgt |
4256297 |
T |
|
| Q |
261 |
atcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||||||||| || ||||||| |
|
|
| T |
4256298 |
atcattaggcctgacctcgtcattg |
4256322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 39 - 283
Target Start/End: Complemental strand, 4580112 - 4579868
Alignment:
| Q |
39 |
attggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggc |
138 |
Q |
| |
|
||||| || ||| |||| ||| |||||||||||||| |||| | |||||||||||| | | ||| |||||||||||||||| || |||||| | |||| |
|
|
| T |
4580112 |
attggccctttatcttcgtttttaaatcaaagtccagaaaaccatttgacatctttaagcaccaatttttggaaagaagataccaagtgtctttattggc |
4580013 |
T |
|
| Q |
139 |
ttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaa |
238 |
Q |
| |
|
||||||| || ||||| || |||||||||||||| |||||||| ||| | || |||||| || ||| || || |||||||||| |||||||| || || |
|
|
| T |
4580012 |
ttgaatccaaggaacctaggtctgttgtttatgtgaattttgggagcttgacagttatgactgcagaaaaactgttagagtttgcatggggtttagcaaa |
4579913 |
T |
|
| Q |
239 |
cagcaaaaaaccctttttgtggatcattaggcctgatcttgtcat |
283 |
Q |
| |
|
||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4579912 |
tagcaagcaaccctttttgtggatcattaggcccgatcttgtcat |
4579868 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 61 - 285
Target Start/End: Complemental strand, 4586294 - 4586070
Alignment:
| Q |
61 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
160 |
Q |
| |
|
||||||||||||||||||| |||| |||||||| | |||||||||||||| ||||| || |||||||| |||||||||||||| ||||| || || |
|
|
| T |
4586294 |
taaatcaaagtccacaaaaccacttagcatctttaagtacaaatctttggaaagaggataccaagtgtcttgattggcttgaatcaaaggaaccgaggtc |
4586195 |
T |
|
| Q |
161 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
260 |
Q |
| |
|
||||||||||| |||||||| |||| || |||||| || ||| || || ||||||||||||||||||||||||| ||||| ||| ||||| ||| |
|
|
| T |
4586194 |
cgttgtttatgtgaattttgggagcacaacagttatgactacagaaaaactattagagtttgcttggggtttggccaatagcaagcaacattttttatgg |
4586095 |
T |
|
| Q |
261 |
atcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||||||| |||||||||||||||| |
|
|
| T |
4586094 |
atcattagacctgatcttgtcattg |
4586070 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 61 - 283
Target Start/End: Complemental strand, 4622798 - 4622578
Alignment:
| Q |
61 |
taaatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatc |
160 |
Q |
| |
|
||||||||| |||||| ||| ||||| ||||| ||| || ||||||||||||||||||| || |||||||| ||||||||||| || ||||| || | |
|
|
| T |
4622798 |
taaatcaaactccacataatcacttggcatctctaggttccaatctttggaaagaagatatcaagtgtcttgagtggcttgaatccaaggaacct-ga-c |
4622701 |
T |
|
| Q |
161 |
tgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtgg |
260 |
Q |
| |
|
| ||||||| || |||||||||||||| || || ||| ||||||| | || |||||||||||||||||||||| | ||||| ||||||||||||||| |
|
|
| T |
4622700 |
tcttgtttacgtgaattttggcagcattacagtgatgactcgagatcaactattagagtttgcttggggtttggctgatagcaagaaaccctttttgtgg |
4622601 |
T |
|
| Q |
261 |
atcattaggcctgatcttgtcat |
283 |
Q |
| |
|
|||||||||||||| |||||||| |
|
|
| T |
4622600 |
atcattaggcctgaccttgtcat |
4622578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 105 - 285
Target Start/End: Complemental strand, 4564325 - 4564145
Alignment:
| Q |
105 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
204 |
Q |
| |
|
|||||||||||||||||||| |||||||||||||||||||| || || || |||| ||||||||||| |||||||| ||||| || |||||| | | | |
|
|
| T |
4564325 |
ctttggaaagaagatactaagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggaagcattacagttatgacaccaa |
4564226 |
T |
|
| Q |
205 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| | || | || ||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4564225 |
aacaactgttggaatttgcttgggggttggccaattgcaataaaccctttttgtggatcattaggcctgaccttgtcattg |
4564145 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 102 - 285
Target Start/End: Complemental strand, 4571589 - 4571406
Alignment:
| Q |
102 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
201 |
Q |
| |
|
||||||||||||||||||| || |||||||| |||||||||||||| ||||| || || ||||||||||| |||||||| |||| || |||||| || |
|
|
| T |
4571589 |
aatctttggaaagaagataacaagtgtcttgattggcttgaatcaaaggaaccgaggtccgttgtttatgtgaattttgggagcaggacagttatgactt |
4571490 |
T |
|
| Q |
202 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||| ||||||||||||||||||||| ||||||||||||| |
|
|
| T |
4571489 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaactctttttgtggatcattaggcccgatcttgtcattg |
4571406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 285
Target Start/End: Complemental strand, 4592842 - 4592665
Alignment:
| Q |
108 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagaga |
207 |
Q |
| |
|
||||||||||||||| | |||||| ||||||||||||| || ||| | | || ||||||||||| ||||| |||||| | || |||||| | ||||| |
|
|
| T |
4592842 |
tggaaagaagatactgagtgtcttaaatggcttgaatcgaaggaatcgggttccgttgtttatgtgaatttcggcagccttacagttatgaatgaagaga |
4592743 |
T |
|
| Q |
208 |
agctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| | ||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4592742 |
aaatgttagagtttgcttggggtttggccaattgcaataaaccttttttgtggatcattaggcctgatcttgtcattg |
4592665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 102 - 283
Target Start/End: Complemental strand, 4557742 - 4557561
Alignment:
| Q |
102 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
201 |
Q |
| |
|
||||||||||||||||||| || ||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| | |
|
|
| T |
4557742 |
aatctttggaaagaagataacaagtgtcttggttggcttgaatccaaggaaccgaggtccgttgtttatgtgaattttgggagcatgacagttatgacgg |
4557643 |
T |
|
| Q |
202 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcat |
283 |
Q |
| |
|
||| || || |||||||||| |||||||| || || ||||| ||||||||||||||||||||||||| ||||||||||| |
|
|
| T |
4557642 |
cagaaaaactgttagagtttgcatggggtttagcaaatagcaagcaaccctttttgtggatcattaggcccgatcttgtcat |
4557561 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 108 - 285
Target Start/End: Complemental strand, 4602400 - 4602223
Alignment:
| Q |
108 |
tggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagaga |
207 |
Q |
| |
|
||||||||||||||| | |||||||||||||||||||| || || || |||| ||||||||||| |||||||||||||| || |||||| | | | |
|
|
| T |
4602400 |
tggaaagaagatactgagtgtcttgaatggcttgaatccaaggagccgggatccgttgtttatgtgaattttggcagcattacagttatgacaccccatc |
4602301 |
T |
|
| Q |
208 |
agctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| | |||| || ||||||||||||||||| || | ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
4602300 |
aattattagaattcgcttggggtttggccaattgccataaaccatttttgtggatcattaggcctgatcttgtcattg |
4602223 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 90 - 285
Target Start/End: Complemental strand, 4617651 - 4617456
Alignment:
| Q |
90 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
189 |
Q |
| |
|
|||||||| || || ||||||||||||||||| | |||||||| ||||||||||| || || || |||| ||||||||||| ||||| |||||||| | |
|
|
| T |
4617651 |
tctttagattccaacctttggaaagaagatacagagtgtcttgattggcttgaatccaaggagccgggatcagttgtttatgtgaatttcggcagcatta |
4617552 |
T |
|
| Q |
190 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| |||||| | | ||| | | | || |||||||||||||||||||| |||| ||| | |||||||||||||| ||||||||||||||||||| |
|
|
| T |
4617551 |
cagttatgacacccgagcaattactggaatttgcttggggtttggccaattgcaagaaatcatttttgtggatcataaggcctgatcttgtcattg |
4617456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 214 - 285
Target Start/End: Complemental strand, 4568561 - 4568490
Alignment:
| Q |
214 |
tagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||| |||| ||||| ||||||||||| ||||| ||||||||||||||||||||| | |||||||||| |
|
|
| T |
4568561 |
tagagttctcttgaggttttgccaacagcaagaaaccttttttgtggatcattaggccttagcttgtcattg |
4568490 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 103 - 143
Target Start/End: Original strand, 4835531 - 4835571
Alignment:
| Q |
103 |
atctttggaaagaagatactaaatgtcttgaatggcttgaa |
143 |
Q |
| |
|
|||||||||| |||||||| ||||||||||||||||||||| |
|
|
| T |
4835531 |
atctttggaaggaagatacaaaatgtcttgaatggcttgaa |
4835571 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 63 - 135
Target Start/End: Complemental strand, 4568700 - 4568628
Alignment:
| Q |
63 |
aatcaaagtccacaaaatgacttgacatctttagactctaatctttggaaagaagatactaaatgtcttgaat |
135 |
Q |
| |
|
||||||| ||| ||||| ||||| | ||||||| || ||||||||||||||||||| ||||||||||||| |
|
|
| T |
4568700 |
aatcaaaatccccaaaagcacttggcttctttaggttccaatctttggaaagaagatatgaaatgtcttgaat |
4568628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 180; Significance: 3e-97; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 10 - 285
Target Start/End: Complemental strand, 24103708 - 24103433
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||| ||| |||| |||||| ||||||| ||||| ||||| ||||||||| |||||||||||||||||||| ||||| |||||||| | || |||||||| |
|
|
| T |
24103708 |
tctactctatgttcccttctatatacaccattggcccatttgcttcttttttaaatcaaagtccacaaaatcacttggcatctttaaattccaatctttg |
24103609 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||||||| |
|
|
| T |
24103608 |
gaaagaagatactaaatgtcttgagtggcttgaatcaaaagaaccaagatcagttgtttatgtaaattttggtagcatcacagttatgtcacgagagaag |
24103509 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||| ||||||||||||||||||||||||| ||||| || || ||||||||||| |||||||||||||||||||||| |
|
|
| T |
24103508 |
ctcttagagtttgcttggggtttggccaatagcaagaacccttttttgtggataattaggcctgatcttgtcattg |
24103433 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 241 - 285
Target Start/End: Original strand, 27999753 - 27999797
Alignment:
| Q |
241 |
gcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|||| ||||| ||||||||||||| ||||||| |||||||||||| |
|
|
| T |
27999753 |
gcaagaaaccttttttgtggatcactaggcctaatcttgtcattg |
27999797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 132; Significance: 1e-68; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 20863266 - 20863541
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| |||| |||||||||||||| ||||| || || | ||||||| |||||||||||||||| ||| ||||| | |||||||| || | |||||| |
|
|
| T |
20863266 |
tctattctatgttcccttctctatacaccattggcccttttgtttcttttttaaatcaaagtccacagaatcacttggcgtctttagattcaagtctttg |
20863365 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
||||||||| ||| ||||||||| |||||||||||| |||||||| ||||| |||| ||||||||||||||||| | ||| || |||||| ||| || |
|
|
| T |
20863366 |
gaaagaagacactgaatgtcttgcatggcttgaatcgaaagaaccgggatctattgtatatgtaaattttggcagtaccacagtcatgtctgtagaaaaa |
20863465 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| |||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
20863466 |
ttgttagagtttgcatggggtttggccaacagcaagaaaccctttttgtggatcattaggcctgatcttgtcattg |
20863541 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 105 - 285
Target Start/End: Complemental strand, 1674840 - 1674660
Alignment:
| Q |
105 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgag |
204 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| || ||||| | ||||||| ||| || |
|
|
| T |
1674840 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaatttcggtagcattattgttatgactccag |
1674741 |
T |
|
| Q |
205 |
agaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| | || | ||||||||||||||||||||| | |||| ||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
1674740 |
atcaactattggagtttgcttggggtttggccgattgcaagaaaccttttttgtggatcactaggcctgatcttgtcattg |
1674660 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 102 - 284
Target Start/End: Original strand, 16685782 - 16685964
Alignment:
| Q |
102 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
201 |
Q |
| |
|
|||||||||||| ||||||| || |||||||| ||||||||||| || ||||| || || ||||||||||| |||||||| ||||| || |||||| || |
|
|
| T |
16685782 |
aatctttggaaataagataccaagtgtcttgattggcttgaatccaaggaaccgagttccgttgtttatgtgaattttgggagcatgacagttatgactg |
16685881 |
T |
|
| Q |
202 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcatt |
284 |
Q |
| |
|
||| || || |||||||||||||||||||| |||| ||||| ||| ||| |||||||||||| |||||||||||||| |
|
|
| T |
16685882 |
cagaaaaactattagagtttgcttggggtttgaccaatagcaagcaacattttcaatggatcattaggtctgatcttgtcatt |
16685964 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 12 - 285
Target Start/End: Complemental strand, 3087127 - 3086854
Alignment:
| Q |
12 |
tattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttgga |
111 |
Q |
| |
|
|||||| |||| ||||| |||| || ||||| |||||| |||| | |||||||||| | |||| ||| ||||| ||||||||| || |||||||||| |
|
|
| T |
3087127 |
tattctgtgttcccttcattatataccattggaccattaccttcactactaaatcaaacttcacataatcacttggcatctttaggttccaatctttgga |
3087028 |
T |
|
| Q |
112 |
aagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaagct |
211 |
Q |
| |
|
|||||||||| || ||||||||||||||||||||||| | || |||||||||||||| | |||||||||||| || |||||| ||| |||| | || |
|
|
| T |
3087027 |
aagaagataccaagtgtcttgaatggcttgaatcaaagggacttgagtctgttgtttatgtgagttttggcagcattacagttatgactcaagagcaact |
3086928 |
T |
|
| Q |
212 |
cgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3086927 |
attagagtttgcttggggtttggccaatagcaagaaaccatttttgtggatcattaggcctgatcttgtcattg |
3086854 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 80; Significance: 1e-37; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 102 - 285
Target Start/End: Original strand, 3234 - 3417
Alignment:
| Q |
102 |
aatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctc |
201 |
Q |
| |
|
|||||||||||||||||||| || |||||||||||||| ||||| || ||||| |||||||||||||| ||||| |||||||| || |||||| ||| |
|
|
| T |
3234 |
aatctttggaaagaagataccaagtgtcttgaatggctcgaatccaaggaacctgagtctgttgtttatgtgaatttcggcagcattacagttatgactc |
3333 |
T |
|
| Q |
202 |
gagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| | | || |||| |||||||||||||||||| | ||||| ||||| |||||||||||||||||||||||||||||||||| |
|
|
| T |
3334 |
caaatcaactgttagaatttgcttggggtttggccgatagcaagaaaccgtttttgtggatcattaggcctgatcttgtcattg |
3417 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 90 - 285
Target Start/End: Complemental strand, 1281743 - 1281548
Alignment:
| Q |
90 |
tctttagactctaatctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatca |
189 |
Q |
| |
|
|||||||| || || |||||||||||||||| | |||||| ||||||||||||| || ||||| ||||||||||||||||| ||||| || ||||| | |
|
|
| T |
1281743 |
tctttagattccaacctttggaaagaagatatcgagtgtcttcaatggcttgaatcgaaggaaccgagatctgttgtttatgtgaatttcggaagcatta |
1281644 |
T |
|
| Q |
190 |
ctgttatgtctcgagagaagctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
| |||||| ||| |||| | || || |||||||||||| |||| || ||||| ||||| ||||||||||||| |||||||||||||||||||| |
|
|
| T |
1281643 |
cagttatgactccagagcaacttcaggaatttgcttggggtctggctaatagcaagaaaccatttttgtggatcactaggcctgatcttgtcattg |
1281548 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 10 - 285
Target Start/End: Original strand, 4112 - 4384
Alignment:
| Q |
10 |
tctattctttgtttccttctctatacacaattggtccattagcttcttttctaaatcaaagtccacaaaatgacttgacatctttagactctaatctttg |
109 |
Q |
| |
|
|||||||| |||| |||||| |||| || ||||| || ||| |||| || ||||||||| |||||| ||| ||| |||||||| || |||||||| |
|
|
| T |
4112 |
tctattctatgttcccttctttatataccattggacctttaacttcattattaaatcaaactccacataatcacta---atctttaggttccaatctttg |
4208 |
T |
|
| Q |
110 |
gaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattttggcagcatcactgttatgtctcgagagaag |
209 |
Q |
| |
|
|||||||||||| || |||||||| ||||||| ||| || ||||| || ||||||||||| |||||||| ||||| || |||||| ||| ||| | |
|
|
| T |
4209 |
gaaagaagataccaagtgtcttgagtggcttgcatccaaggaacctgagtcggttgtttatgtgaattttggaagcattacagttatgactccagatcaa |
4308 |
T |
|
| Q |
210 |
ctcgtagagtttgcttggggtttggccaacagcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
|| ||||||||||||||| |||| |||| | || ||| ||||||||||||||||||||||||| |||||||||| |
|
|
| T |
4309 |
ctgttagagtttgcttgggttttgaccaattgtaagaaatcctttttgtggatcattaggcctgaccttgtcattg |
4384 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0199 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0199
Description:
Target: scaffold0199; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 105 - 178
Target Start/End: Complemental strand, 77 - 4
Alignment:
| Q |
105 |
ctttggaaagaagatactaaatgtcttgaatggcttgaatcaaaagaaccaagatctgttgtttatgtaaattt |
178 |
Q |
| |
|
|||||||||||||||||| | |||||||||||||||||||| || ||||| |||| ||||||||||| ||||| |
|
|
| T |
77 |
ctttggaaagaagatactgagtgtcttgaatggcttgaatccaacgaaccgggatcggttgtttatgtgaattt |
4 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 240 - 285
Target Start/End: Original strand, 3162 - 3207
Alignment:
| Q |
240 |
agcaaaaaaccctttttgtggatcattaggcctgatcttgtcattg |
285 |
Q |
| |
|
||||| ||||||||| |||||||||||||| |||| |||||||||| |
|
|
| T |
3162 |
agcaagaaaccctttgtgtggatcattaggtctgaccttgtcattg |
3207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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