View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8499_low_27 (Length: 255)
Name: NF8499_low_27
Description: NF8499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8499_low_27 |
 | |
|
| [»] chr6 (32 HSPs) |
| |
|
| [»] chr3 (1 HSPs) |
| |
|
| [»] chr8 (3 HSPs) |
| |
|
| [»] scaffold0288 (1 HSPs) |
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|
| [»] chr7 (1 HSPs) |
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| [»] scaffold0477 (1 HSPs) |
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| [»] scaffold0475 (1 HSPs) |
| | |
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Alignment Details
Target: chr6 (Bit Score: 234; Significance: 1e-129; HSPs: 32)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4574451 - 4574705
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574451 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
4574550 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574551 |
cgaaaaaaatggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
4574650 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4574651 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
4574705 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 194; E-Value: 1e-105
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4560649 - 4560903
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4560649 |
cattgaccagtttctccacgtcctccctctttacatttgtatcaatttcgtttccaatcttccattcattgcaaatatatcttcagtttgctggctgatc |
4560748 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4560749 |
tgcaaaaaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtgg |
4560848 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4560849 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
4560903 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 146; E-Value: 5e-77
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4563854 - 4564108
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||| |||||||||||||| || ||||||||||| |||||||||||| | |||||||||||||||||| ||||| ||| ||||||| ||||||||| |
|
|
| T |
4563854 |
cattgacaagtttctccacctcttctctctttacattcgtatcgatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatc |
4563953 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || | |||| ||||| |
|
|
| T |
4563954 |
accaaagaatggccaacacaacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtgg |
4564053 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| |||| |||||||||||||||| |
|
|
| T |
4564054 |
ttcaatactttctcctgtggacaccaacttgcaattaagcctctatctgaaattt |
4564108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4601932 - 4602186
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||| ||| ||| |||||| ||||| ||||| |||||||||||| | ||||||||||||||||| |||||| |||| ||||||| ||||||||| |
|
|
| T |
4601932 |
cattgatcagcttcgccaactcctctctcttcacatttgtatcgatttccataccaatctcccattcattacaaataaatctacagtttgttggctgatc |
4602031 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| |||||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||| ||||| |
|
|
| T |
4602032 |
ggcaaaaaaaggccaacacaacatcggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtgg |
4602131 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
4602132 |
ttcaacactttctcttgtggacaccaacttgctattaggcctctatctgaaattt |
4602186 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4626094 - 4626348
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||||||||| ||| |||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||||| || |||| ||||||||| |
|
|
| T |
4626094 |
cattgatcagtttctctaccccctccctcttcacattagcatcgatttccattccaatctcccattcattgcaaatatatctacaatttgttggctgatc |
4626193 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| | ||||||||||||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||| | |||| | ||| |
|
|
| T |
4626194 |
agcaaaatttggccaacacagcattggaactccagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattgaaggatgg |
4626293 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||| |||||||||||| |||||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
4626294 |
ttcagtactttctcttgcggacaccagcttgcgattaggcctctatctgaaattt |
4626348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 4613707 - 4613453
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||||||| ||||| ||||| || ||||| ||||| || || |||||| | ||||| |||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4613707 |
cattgaccagcttctctacctcatctctcttcacattggtgtcaatttccatcccaatttcccattcattgcatatatatctgcagtttgctggctgatc |
4613608 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
|| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || | |||| ||||| |
|
|
| T |
4613607 |
cgcgaaaaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtgg |
4613508 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|| ||||||| |||||| |||||||| || || ||||| |||||||||||||||| |
|
|
| T |
4613507 |
tttaatacttgctcttgaggacaccagctcgcgattaggcctctatctgaaattt |
4613453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 27 - 255
Target Start/End: Complemental strand, 4267129 - 4266901
Alignment:
| Q |
27 |
ctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacataacattg |
126 |
Q |
| |
|
||||| ||||| |||| |||||| ||||||||||||||||| ||||||| |||| ||||||| ||||||||| ||||||||| ||||||| |
|
|
| T |
4267129 |
ctcttcacatttgtattgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttggctgatcaccaaagaatggccaacacaacattg |
4267030 |
T |
|
| Q |
127 |
gaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacacca |
226 |
Q |
| |
|
| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| |||||||||| ||||| |||||||||||||| |
|
|
| T |
4267029 |
gcactccagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacacca |
4266930 |
T |
|
| Q |
227 |
acttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||||||||||||||| |
|
|
| T |
4266929 |
acttgctattagtcctctatctgaaattt |
4266901 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 13 - 255
Target Start/End: Original strand, 4480848 - 4481090
Alignment:
| Q |
13 |
tctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntgg |
112 |
Q |
| |
|
||||||| || || ||||| ||||| ||||||||||| ||||||||||||||||||||||||| ||| | ||| | ||||||||| | ||| |
|
|
| T |
4480848 |
tctccacatcttctctcttcacattggtatcgatttcgagtccaatctcccattcattgcaaataattctacggttaggtggctgatcggcaaagaatgg |
4480947 |
T |
|
| Q |
113 |
ccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttc |
212 |
Q |
| |
|
|||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||||| |||||| |
|
|
| T |
4480948 |
ccaacacaacattggcactccagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttc |
4481047 |
T |
|
| Q |
213 |
tcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
4481048 |
tcttgtggacaccaacttgctattaggcctctatttgaaattt |
4481090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 119; E-Value: 7e-61
Query Start/End: Original strand, 20 - 255
Target Start/End: Original strand, 4617184 - 4617419
Alignment:
| Q |
20 |
ctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacat |
119 |
Q |
| |
|
|||||| ||||| ||||| |||||||||||| | ||||||||||||||||| |||||| |||| |||| || |||||| || | ||||||||| |
|
|
| T |
4617184 |
ctcctctctcttcacattcgtatcgatttccataccaatctcccattcattacaaataaatctacagtctgttggctggtcggcaaaaaatggccaacac |
4617283 |
T |
|
| Q |
120 |
aacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtg |
219 |
Q |
| |
|
|||||||| |||||||| ||||| |||||||||||||| |||||||||||||||||||||||||| |||| |||| |||||||||| ||||| ||||||| |
|
|
| T |
4617284 |
aacattggcactccagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtg |
4617383 |
T |
|
| Q |
220 |
gacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
4617384 |
gacaccaacttgctattaggcctctatctgcaattt |
4617419 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4585779 - 4586033
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||||| |||||||||||||| ||||| ||||| || || | |||| | |||||||||||||||||||||||| ||| ||||||| ||||||||| |
|
|
| T |
4585779 |
cattgaccaacttctccacctcctctctcttcacattggtgtcaacttccatcccaatctcccattcattgcaaataattctacagtttgttggctgatc |
4585878 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| | |||| ||||| |
|
|
| T |
4585879 |
agcaatgaatggccaacacaacattggcactccagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattgaagggtgg |
4585978 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||||| |||||| || ||||||| || ||||| |||||||||||||||| |
|
|
| T |
4585979 |
ttcaatacttgctcttgcgggcaccaacccgcgattaggcctctatctgaaattt |
4586033 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 9 - 255
Target Start/End: Original strand, 4592382 - 4592628
Alignment:
| Q |
9 |
agtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnn |
108 |
Q |
| |
|
||||||||||||||||| ||||||||||| ||||| |||||| | |||||||||||||||||| ||||| ||| ||||||| ||||||||| |
|
|
| T |
4592382 |
agtttctccacctcctctctctttacattcgtatcaatttccatcccaatctcccattcattgtaaataagtctacagtttgttggctgatcactaaaga |
4592481 |
T |
|
| Q |
109 |
ntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
208 |
Q |
| |
|
||||||||| |||||||||| |||||||||||| ||||||||||||||||||||||| |||||||||||||||||||| | |||| ||||||| ||||| |
|
|
| T |
4592482 |
atggccaacacaacattggaattccagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggtttaatac |
4592581 |
T |
|
| Q |
209 |
tttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|| |||||| |||||||| || || |||| |||||||||||||||| |
|
|
| T |
4592582 |
ttgctcttgaggacaccagctcgcgattacgcctctatctgaaattt |
4592628 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 3 - 255
Target Start/End: Original strand, 4461268 - 4461520
Alignment:
| Q |
3 |
ttgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccg |
102 |
Q |
| |
|
||||||| ||||||||||| |||||||| |||| |||||||||| |||||||||||||| ||||||||| |||| ||||||||||||||||| |
|
|
| T |
4461268 |
ttgaccaacttctccacctcatccctcttcacatctttatcgatttcaagtccaatctcccatttgttgcaaataaatctacagtttgctggctgatcac |
4461367 |
T |
|
| Q |
103 |
nnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggtt |
202 |
Q |
| |
|
||||||||| ||||| || ||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||| | |||| ||||||| |
|
|
| T |
4461368 |
caaagaatggccaacacaacatcggcactccagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggtt |
4461467 |
T |
|
| Q |
203 |
caatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|| ||||| |||||| |||||||| ||||||||||| |||||||||||||||| |
|
|
| T |
4461468 |
cagtacttgctcttgcggacaccagcttgctattaggcctctatctgaaattt |
4461520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 4515110 - 4514856
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||| || || || |||||||| ||||| ||||| |||||||||| | |||||||||||||||||||||||| |||| ||||||| ||| ||||| |
|
|
| T |
4515110 |
cattgacaagcttttcaacctcctctctcttcacattcatatcgatttcgatcccaatctcccattcattgcaaataaatctacagtttgttggttgatc |
4515011 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||| | |||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||| || | |||| ||||| |
|
|
| T |
4515010 |
accaaagaattgccaacaaagcattggcactccagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtgg |
4514911 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||| |||||||||||||||||||||||||||||||| |||||||||| ||||| |
|
|
| T |
4514910 |
ttcaaaactttctcttgtggacaccaacttgctattaggcctctatctgcaattt |
4514856 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4557268 - 4557522
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||||| ||||| ||||| || ||||| ||||| || || |||||| | |||||||||||| ||||||||||||||||||||||||||||||||| |
|
|
| T |
4557268 |
cattgaccaaattctctacctcatctctcttcacattggtgtcaatttccatgccaatctcccatgtattgcaaatatatctgcagtttgctggctgatc |
4557367 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| | |||| | ||| |
|
|
| T |
4557368 |
agcaaaaaatggccaacacaacattggaactccagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaaggatgg |
4557467 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|| ||||||| |||||| || ||||| | || ||||| |||||||||||||||| |
|
|
| T |
4557468 |
tttaatacttgctcttgcgggcaccagcccgcgattaggcctctatctgaaattt |
4557522 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4579575 - 4579829
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||| ||||| |||||||||||||| ||||| |||||||| |||||||| ||||||| | |||| |||||| | |||||||||| || |||| ||||| |
|
|
| T |
4579575 |
cattaaccagcttctccacctcctctctcttcacattagtgtcgatttcaattccaattttccatgtattgcataaatatctgcagcttactgggtgatc |
4579674 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| | |||| ||||| |
|
|
| T |
4579675 |
agcgaaaaatggccaacacaacattggaactccagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattgaagggtgg |
4579774 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||| ||||| |||||| |||||||| || | |||||| |||||||||||||||| |
|
|
| T |
4579775 |
ttcagtacttgctcttgcggacaccagctcgttattaggcctctatctgaaattt |
4579829 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 3 - 255
Target Start/End: Original strand, 4598316 - 4598568
Alignment:
| Q |
3 |
ttgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccg |
102 |
Q |
| |
|
|||||||| |||||||||||||| ||||| |||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||| ||||||||| |
|
|
| T |
4598316 |
ttgaccagcttctccacctcctctctcttcacattagtttcaattttgattccaatctcccattcattgcaaatatatctgcagttggcttgctgatccg |
4598415 |
T |
|
| Q |
103 |
nnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggtt |
202 |
Q |
| |
|
|| ||||| |||||||| ||||| |||||||| |||||||||||||||||||||||||||||||| ||||||||||| | |||| | ||||| |
|
|
| T |
4598416 |
cgaaaaagggacaacacaacattggcactccggcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattgaaggatggtt |
4598515 |
T |
|
| Q |
203 |
caatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||| |||||| ||||||| ||||| | || |||||||||||||||| |
|
|
| T |
4598516 |
taatacttgctcttgcagacaccagcttgcaactaagcctctatctgaaattt |
4598568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 109; E-Value: 6e-55
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 4469946 - 4470199
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||| || ||||||||||| || ||||| |||| |||||||||| ||||||||||||||||||||||||| |||| || |||||| ||||||| |
|
|
| T |
4469946 |
cattgactagcttctccacctcatctctcttcacatctttatcgatttcaagtccaatctcccattcattgcaaataaatctacaatttgctagctgatc |
4470045 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
||||||||| |||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |
|
|
| T |
4470046 |
accaaagaatggccaacacaacattggcactccagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtgg |
4470145 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaatt |
254 |
Q |
| |
|
|||| ||||| |||||| |||||||| | | ||||| ||||||||||||||| |
|
|
| T |
4470146 |
ttcagtacttgctcttgaggacaccagttcacgattaggcctctatctgaaatt |
4470199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 1 - 252
Target Start/End: Complemental strand, 4256601 - 4256349
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctgg-ctgat |
99 |
Q |
| |
|
|||||| ||| ||||||||||| || ||||| |||||||||| |||||| |||||||||||||||| | |||||| |||| ||||||| ||| ||||| |
|
|
| T |
4256601 |
cattgatcagattctccacctcatctctcttcacattagtattgatttcaattccaatctcccattcgctacaaataaatctacagtttgttggtctgat |
4256502 |
T |
|
| Q |
100 |
ccgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtg |
199 |
Q |
| |
|
| | ||||||||| |||||||||||||| ||||| ||||||||| |||||||||||||||| |||||||||||||||||||| |||||| ||| |
|
|
| T |
4256501 |
cagcaaaaaatggccaacacaacattggaactccggcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaactgaagagtg |
4256402 |
T |
|
| Q |
200 |
gttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaa |
252 |
Q |
| |
|
||||| ||||| |||||| ||||||||||| | |||||||||||||| |||| |
|
|
| T |
4256401 |
gttcagtacttgctcttgcggacaccaactctcgattagtcctctatccgaaa |
4256349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 4571115 - 4571369
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||||| ||||||||||| | ||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| ||||||||||||||||| |
|
|
| T |
4571115 |
cattgaccaaattctccacctcatttctcttcacattagtatcgatttcgattccaatctcccatgtattgcagatatatctacagtttgctggctgatc |
4571214 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| |||| |||| |||||||||||||||| | |||||||||| || |||||||||||||| || ||||||||||| ||||| | |||| | ||| |
|
|
| T |
4571215 |
agcaaaaaatggctaacacaacattggaactccagtagatatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattgaaggatgg |
4571314 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||| | ||||||| || ||||| |||||||||||||||| |
|
|
| T |
4571315 |
ttcaatactttctcttgcgagcaccaaccagcaattaggcctctatctgaaattt |
4571369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 255
Target Start/End: Original strand, 4622301 - 4622539
Alignment:
| Q |
17 |
cacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaa |
116 |
Q |
| |
|
||||||||| || || |||||||||| |||||| |||||||||||||| |||||| |||||||| ||||||| ||||||||| | ||||||| |
|
|
| T |
4622301 |
cacctcctctcttttcacattagtattgatttcgattccaatctcccatgaattgcagatatatctacagtttgttggctgatcagcgaaaaatggccaa |
4622400 |
T |
|
| Q |
117 |
cataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctctt |
216 |
Q |
| |
|
|| | ||||| ||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||||| | || | ||||||| | ||||| ||||| |
|
|
| T |
4622401 |
cacagcattgaaactccagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctctt |
4622500 |
T |
|
| Q |
217 |
gtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||||||| ||| ||||| |||||| ||||||||| |
|
|
| T |
4622501 |
gtggacaccaacctgcgattaggcctctacctgaaattt |
4622539 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 4457748 - 4457983
Alignment:
| Q |
12 |
ttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntg |
111 |
Q |
| |
|
||||||||||| || ||||| ||||| |||||||||||| | |||||||| ||||||||||||||| |||| || ||| ||||| ||| || |
|
|
| T |
4457748 |
ttctccacctcatctctcttcacatttgtatcgatttccatcccaatctctcattcattgcaaataaatctacaacttgttggcttatcaccaaagaatg |
4457847 |
T |
|
| Q |
112 |
gccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatacttt |
211 |
Q |
| |
|
|||||| | |||||| |||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||| |||| |||| |||||||||| ||||| |
|
|
| T |
4457848 |
gccaacgcagcattggcactccagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattgaagggtggttcaacacttt |
4457947 |
T |
|
| Q |
212 |
ctcttgtggacaccaacttgctattagtcctctatc |
247 |
Q |
| |
|
||||||||||||||||||||||||| |||||||| |
|
|
| T |
4457948 |
atcttgtggacaccaacttgctattaagcctctatc |
4457983 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 4260143 - 4259889
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||| ||| ||||||| || || || |||||||||| ||||| |||||||||||||||| || |||||| |||| ||||||| ||||||||| |
|
|
| T |
4260143 |
cattgatcagcttcgccacctcatctcttttcacattagtattaatttcaattccaatctcccattcgttacaaataaatctacagtttgttggctgatc |
4260044 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||||||| | ||||| ||||||||| ||||||||||||||||||||||||| ||||||||||| |||||| |||| |
|
|
| T |
4260043 |
agcaaaaaatggccaacacaacattggaacttcggcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagtgg |
4259944 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||| ||||| |||||| |||||||| || || ||||| |||||||| ||||||| |
|
|
| T |
4259943 |
ttcagtacttgctcttgcggacaccagctcgcgattaggcctctatccgaaattt |
4259889 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 4490344 - 4490090
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||||||||| ||||| || ||||||||||| ||||| |||| | | |||||||||||||| | ||||||| ||| | | | ||| ||||| |
|
|
| T |
4490344 |
cattgatcagtttctctacctcttctctctttacattggtatcaattttcatcccaatctcccattcttcgcaaataattctactgctaagtggttgatc |
4490245 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||| |||||||||||||| || || || ||||||||||||| |||||||||||||||||||| | |||| |||| |
|
|
| T |
4490244 |
agcaaaaaatggccaacacaacattggcactccagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattgaagggtga |
4490145 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4490144 |
ttcaataccttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
4490090 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 33 - 255
Target Start/End: Original strand, 4506032 - 4506254
Alignment:
| Q |
33 |
acattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacataacattggaactc |
132 |
Q |
| |
|
||||||||||| ||||| ||||||||||| |||||||||||||| |||| ||||||| ||| ||||| |||||||| | |||||| |||| |
|
|
| T |
4506032 |
acattagtatcaatttcgattccaatctccaattcattgcaaataaatctacagtttgttggttgatcaccaaagaacggccaacacagcattggcactc |
4506131 |
T |
|
| Q |
133 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgc |
232 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| | |||| |||| || || ||||||||||||| |||||| ||||| |
|
|
| T |
4506132 |
cagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgc |
4506231 |
T |
|
| Q |
233 |
tattagtcctctatctgaaattt |
255 |
Q |
| |
|
||| || | |||||||||||||| |
|
|
| T |
4506232 |
tataaggcttctatctgaaattt |
4506254 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 247
Target Start/End: Original strand, 4516464 - 4516710
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||| |||||||||||||| ||||| ||||| ||||| ||||| ||||||||||||||||||||||||||||||||| |||| |||||| || |
|
|
| T |
4516464 |
cattgatcagcttctccacctcctctctcttcacattggtatcaatttctgctccaatctcccattcattgcaaatatatctgcaatttgttggctgctc |
4516563 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| |||||||| |||||||| ||||| ||||| |||||||| | || ||||||||||| ||||||||||||||||| || |||||| | ||| |
|
|
| T |
4516564 |
agcaaaaaaaggccaacacaacattggtactccggcacagatgctttccattgtggagttccatccacaatgagtcaagaatcctccaactgaaggatgg |
4516663 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatc |
247 |
Q |
| |
|
||||| ||||||||||| |||||||| |||||||||| |||||||| |
|
|
| T |
4516664 |
ttcaacactttctcttgcggacaccagcttgctattacgcctctatc |
4516710 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 3 - 255
Target Start/End: Original strand, 3171886 - 3172138
Alignment:
| Q |
3 |
ttgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccg |
102 |
Q |
| |
|
|||| ||||||||| |||||| | ||||||||||| ||||| |||||| | ||||||| |||||| | ||||||| ||| | ||| | ||| ||||| | |
|
|
| T |
3171886 |
ttgatcagtttctctacctcccctctctttacattggtatcaatttccatcccaatcttccattcttggcaaataattctactgttaggtggttgatcag |
3171985 |
T |
|
| Q |
103 |
nnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggtt |
202 |
Q |
| |
|
||||| ||| |||||||| | ||||||||||| ||||| |||||||||||||||||||| |||||||||||||| || | |||| | ||||| |
|
|
| T |
3171986 |
caaaaaatggcctacacaacattggcattccagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattgaaggatggtt |
3172085 |
T |
|
| Q |
203 |
caatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||| ||||||||||| |||||||||||||||||||| |||||||||||||||| |
|
|
| T |
3172086 |
caacactttctcttgcggacaccaacttgctattaggcctctatctgaaattt |
3172138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 246
Target Start/End: Complemental strand, 4504277 - 4504141
Alignment:
| Q |
110 |
tggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatact |
209 |
Q |
| |
|
||||||||| |||||||| ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||| |||| |||| |||||||||| ||| |
|
|
| T |
4504277 |
tggccaacacaacattggcactccagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgattgaagggtggttcaacact |
4504178 |
T |
|
| Q |
210 |
ttctcttgtggacaccaacttgctattagtcctctat |
246 |
Q |
| |
|
|| |||||||||||||||||||||| |||||||||| |
|
|
| T |
4504177 |
ttatcttgtggacaccaacttgctacaagtcctctat |
4504141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 4493098 - 4493346
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||||||| |||||||| | || || || ||||| |||||||||| |||||||||| ||||||||||||| |||| ||||||| ||||||||| |
|
|
| T |
4493098 |
cattgaccagattctccacattttctctattaacattcctatcgatttctactccaatctccaattcattgcaaatcaatctacagtttgttggctgatc |
4493197 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
|||||||| |||||||| ||||| ||||||||| ||| || |||||||||||||| |||||||||||||||||||| | ||| ||||| |
|
|
| T |
4493198 |
actaaagaaaggccaacacaacattggcactccggcacatatgtttttggtagttgagttccatccacaatgagtcaagaatccaccaatcgaatggtgg |
4493297 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctg |
249 |
Q |
| |
|
|||| | ||||||||||||||||||||| || ||||| |||||||||| |
|
|
| T |
4493298 |
ttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 12 - 247
Target Start/End: Original strand, 4568210 - 4568445
Alignment:
| Q |
12 |
ttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntg |
111 |
Q |
| |
|
|||||||||||||| ||||| ||||| ||||| ||||| |||| |||||| | | ||| |||||||||||||||| || |||||| || | | |
|
|
| T |
4568210 |
ttctccacctcctctctcttcacatttgtatcaatttcgattccgatctccaacttattacaaatatatctgcagtatgttggctgctcagaaaaaaaag |
4568309 |
T |
|
| Q |
112 |
gccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatacttt |
211 |
Q |
| |
|
|||||||||||||||| |||| ||||| |||||||| || ||||||||||| |||||||||||||||| || |||||| |||||||||| |||| |
|
|
| T |
4568310 |
gccaacataacattggtactctggcacaaatgctttccaatgtggagttccatccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttg |
4568409 |
T |
|
| Q |
212 |
ctcttgtggacaccaacttgctattagtcctctatc |
247 |
Q |
| |
|
|||||| |||||||| ||||||||| | |||||||| |
|
|
| T |
4568410 |
ctcttgcggacaccagcttgctatttggcctctatc |
4568445 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 138 - 255
Target Start/End: Complemental strand, 4299673 - 4299556
Alignment:
| Q |
138 |
catatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctatta |
237 |
Q |
| |
|
|||||||||||| |||||||||||||||| || ||||||||||||||||| | |||| ||||||||| ||||| |||||||||||| | ||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
238 |
gtcctctatctgaaattt |
255 |
Q |
| |
|
| ||||||| |||||||| |
|
|
| T |
4299573 |
ggcctctatttgaaattt |
4299556 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 121 - 232
Target Start/End: Complemental strand, 4391996 - 4391885
Alignment:
| Q |
121 |
acattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtgg |
220 |
Q |
| |
|
|||||||||||| || ||| ||||||||| ||| |||||| ||||| ||||| || |||||||||| | | || ||||||||||||||| ||||| || |
|
|
| T |
4391996 |
acattggaactctagaacaaatgctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcgg |
4391897 |
T |
|
| Q |
221 |
acaccaacttgc |
232 |
Q |
| |
|
|||||| ||||| |
|
|
| T |
4391896 |
acaccatcttgc |
4391885 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 4299735 - 4299671
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccat |
65 |
Q |
| |
|
|||||| ||| || ||||||||||| ||| | ||||| ||||||||||| |||||||||||||| |
|
|
| T |
4299735 |
cattgatcagcttttccacctcctctctcctcacatttgtatcgatttcgattccaatctcccat |
4299671 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 147; Significance: 1e-77; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 16 - 255
Target Start/End: Original strand, 1281272 - 1281511
Alignment:
| Q |
16 |
ccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggcca |
115 |
Q |
| |
|
|||||||||| ||||| ||||| |||||||||||| | ||||||| ||||||||| |||||| |||| |||| || ||||||||| | |||||| |
|
|
| T |
1281272 |
ccacctcctctctcttcacatttgtatcgatttccataccaatcttccattcattacaaataaatctacagtctgttggctgatcagcaaaaaatggcca |
1281371 |
T |
|
| Q |
116 |
acataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctct |
215 |
Q |
| |
|
||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||| |
|
|
| T |
1281372 |
acacaacattggcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctct |
1281471 |
T |
|
| Q |
216 |
tgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1281472 |
tgtggacaccaacttgctattaggcctctatctgaaattt |
1281511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 121; Significance: 4e-62; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 27 - 252
Target Start/End: Original strand, 24103168 - 24103393
Alignment:
| Q |
27 |
ctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacataacattg |
126 |
Q |
| |
|
||||| ||||| ||||||||||| ||||||||||||||||| ||||||| |||| ||||||| ||| ||||| ||||||||| ||||||| |
|
|
| T |
24103168 |
ctcttcacatttgtatcgatttcgagtccaatctcccattcatagcaaataaatctacagtttgttggttgatcaccaaagaatggccaacacaacattg |
24103267 |
T |
|
| Q |
127 |
gaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacacca |
226 |
Q |
| |
|
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||| || ||||| |||||||||||||| |
|
|
| T |
24103268 |
gcactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacacca |
24103367 |
T |
|
| Q |
227 |
acttgctattagtcctctatctgaaa |
252 |
Q |
| |
|
|||||||||||||||||||||||||| |
|
|
| T |
24103368 |
acttgctattagtcctctatctgaaa |
24103393 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 40 - 255
Target Start/End: Complemental strand, 28000049 - 27999834
Alignment:
| Q |
40 |
tatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacataacattggaactccagcaca |
139 |
Q |
| |
|
|||| |||||| | ||||||| ||||||||| |||||| |||| ||||||| ||||||||| | || |||||| |||||||| |||||||| || |
|
|
| T |
28000049 |
tatcaatttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatgaccaacacaacattggcactccagcgca |
27999950 |
T |
|
| Q |
140 |
tatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgctattagt |
239 |
Q |
| |
|
||||||||| |||||||||||||||||||| ||||||||||| || | || |||| |||||||||| ||||||||||||||||||||| ||| |||||| |
|
|
| T |
27999949 |
tatgctttcggtggttgagttccatccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttgatattagg |
27999850 |
T |
|
| Q |
240 |
cctctatctgaaattt |
255 |
Q |
| |
|
|||||||||||||||| |
|
|
| T |
27999849 |
cctctatctgaaattt |
27999834 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 118; Significance: 3e-60; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 16686256 - 16686002
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||||| |||||||||||| || ||||| ||||| || || |||||| | |||||||||||||||||||||||||||||||| |||||||||||||| |
|
|
| T |
16686256 |
cattgaccaatttctccacctcatctctcttcacattggtgtcaatttccatgccaatctcccattcattgcaaatatatctgcattttgctggctgatc |
16686157 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
| ||||||||| |||||||||||||||||| |||| ||||||||||||||||||||||| |||||||| ||||||||||||| |||| | ||| |
|
|
| T |
16686156 |
agcaaaaaatggccaacacaacattggaactccagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattgaaggatgg |
16686057 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|| ||||||| |||||| || ||||| || || ||||| | ||||||||| |||| |
|
|
| T |
16686056 |
tttaatacttgctcttgcgggcaccagctcgcgattaggcttctatctgagattt |
16686002 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 22 - 255
Target Start/End: Original strand, 1674390 - 1674623
Alignment:
| Q |
22 |
cctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntggccaacataa |
121 |
Q |
| |
|
|||| ||||| ||||| ||||| |||||| | ||||||| ||||||||| |||||| |||| ||||||| ||||||||| | ||||||||| || |
|
|
| T |
1674390 |
cctctctcttcacattcgtatcaatttccataccaatcttccattcattacaaataaatctacagtttgttggctgatcagcaaaaaatggccaacacaa |
1674489 |
T |
|
| Q |
122 |
cattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtgga |
221 |
Q |
| |
|
|||||| |||||||| |||||||||||||||||||||||||||||||| || ||||||||||| |||| |||| |||||||||| ||||||||||||||| |
|
|
| T |
1674490 |
cattggcactccagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtgga |
1674589 |
T |
|
| Q |
222 |
caccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||| ||| |||||| |||||||||||||||| |
|
|
| T |
1674590 |
caccaatttgatattaggcctctatctgaaattt |
1674623 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 13 - 255
Target Start/End: Complemental strand, 20863820 - 20863578
Alignment:
| Q |
13 |
tctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnnntgg |
112 |
Q |
| |
|
||||||||||||| ||||| ||||| || || ||||| | ||||||||||||| |||||||| ||||||||||||| |||||||| | ||| |
|
|
| T |
20863820 |
tctccacctcctctctcttgacattggtgtcaatttcgatcccaatctcccatttgttgcaaatgtatctgcagtttgtcggctgatcagcaaaaaatgg |
20863721 |
T |
|
| Q |
113 |
ccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttc |
212 |
Q |
| |
|
||| || |||||||| ||||||||||||||||| ||| |||||||||||||||| |||||||| | |||||||| | |||| | |||||||| || ||| |
|
|
| T |
20863720 |
ccagcacaacattggcactccagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattgaaggatggttcaacaccttc |
20863621 |
T |
|
| Q |
213 |
tcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||||||||||||||||| || ||||| |||||||||||||||| |
|
|
| T |
20863620 |
tcttgtggacaccaactcgcgattaggcctctatctgaaattt |
20863578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 102; Significance: 9e-51; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 1 - 255
Target Start/End: Complemental strand, 3708 - 3454
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
||||||| || ||||||||||| || ||||| |||| |||||||||| ||||||||||||||| ||||||||| |||| ||||||| ||||||||| |
|
|
| T |
3708 |
cattgactagcttctccacctcatctctcttcacatccatatcgatttcaagtccaatctcccattcgttgcaaataaatctacagtttgttggctgatc |
3609 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
||||||||| | |||||| |||||||| |||||||||||||||||||| |||||||| |||||||||||||||||||| | |||| ||||| |
|
|
| T |
3608 |
accaaagaatggccaacaaagcattggtactccagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtgg |
3509 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
||| ||||| ||||||||||||||| |||| ||||| |||||||||||||||| |
|
|
| T |
3508 |
atcagtacttgctcttgtggacaccagcttgtgattaggcctctatctgaaattt |
3454 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 98; Significance: 2e-48; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 1 - 255
Target Start/End: Original strand, 3086563 - 3086817
Alignment:
| Q |
1 |
cattgaccagtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatc |
100 |
Q |
| |
|
|||||| ||| ||||| |||||||| ||||| ||||||||||||||||| |||||||||||||| |||||| |||||||| |||||| ||| ||||| |
|
|
| T |
3086563 |
cattgatcagcttctcgacctcctctctcttcacattagtatcgatttcaattccaatctcccatatattgcagatatatctacagtttattggttgatc |
3086662 |
T |
|
| Q |
101 |
cgnnnnnnntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtgg |
200 |
Q |
| |
|
||||||||| |||||||| ||||||||| || ||||||| |||||||||||||| |||||||||||||||||||| | |||| |||| |
|
|
| T |
3086663 |
tccataaaatggccaacacaacattggcactccagcaagtacgctttcaaccgttgagttccatccacaatgagtcaagaatccaccaattgaagggtga |
3086762 |
T |
|
| Q |
201 |
ttcaatactttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
|||||||||| |||||| |||||||| ||||| ||||| |||||||||||||||| |
|
|
| T |
3086763 |
ttcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaattt |
3086817 |
T |
|
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Target: scaffold0477 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 110 - 255
Target Start/End: Complemental strand, 4566 - 4421
Alignment:
| Q |
110 |
tggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatact |
209 |
Q |
| |
|
||||||||| |||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||| | |||| ||||||||| |||| |
|
|
| T |
4566 |
tggccaacacaacattggcactcctacacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtact |
4467 |
T |
|
| Q |
210 |
ttctcttgtggacaccaacttgctattagtcctctatctgaaattt |
255 |
Q |
| |
|
| ||||||||||||||| || || ||||| |||||||||||||||| |
|
|
| T |
4466 |
tgctcttgtggacaccagctcgcaattaggcctctatctgaaattt |
4421 |
T |
|
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Target: scaffold0475 (Bit Score: 71; Significance: 3e-32; HSPs: 1)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 232
Target Start/End: Complemental strand, 3665 - 3443
Alignment:
| Q |
9 |
agtttctccacctcctccctctttacattagtatcgatttcctttccaatctcccattcattgcaaatatatctgcagtttgctggctgatccgnnnnnn |
108 |
Q |
| |
|
||||||||||||||||| ||||| ||||| | ||| ||||| ||||||||||||||||||| ||||| |||| ||||||| || || || | |
|
|
| T |
3665 |
agtttctccacctcctctctcttcacattggaatctatttcacttccaatctcccattcattccaaatgcatctacagtttgttgagtgttcggggaaaa |
3566 |
T |
|
| Q |
109 |
ntggccaacataacattggaactccagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatac |
208 |
Q |
| |
|
|||||||| | |||||||||||||| ||| ||||||||| |||||||||||||||| |||||||| ||||||||||| ||| || |||||||||| || |
|
|
| T |
3565 |
atggccaacgcagcattggaactccagaacaaatgctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacac |
3467 |
T |
|
| Q |
209 |
tttctcttgtggacaccaacttgc |
232 |
Q |
| |
|
|| ||||| |||||||| ||||| |
|
|
| T |
3466 |
ttgctcttacggacaccatcttgc |
3443 |
T |
|
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Target: chr2 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 248
Target Start/End: Complemental strand, 1351098 - 1351057
Alignment:
| Q |
207 |
actttctcttgtggacaccaacttgctattagtcctctatct |
248 |
Q |
| |
|
|||||||||||||||||||||| | | ||||||||||||||| |
|
|
| T |
1351098 |
actttctcttgtggacaccaacctaccattagtcctctatct |
1351057 |
T |
|
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