View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8499_low_37 (Length: 216)

Name: NF8499_low_37
Description: NF8499
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8499_low_37
NF8499_low_37
[»] scaffold1695 (1 HSPs)
scaffold1695 (12-142)||(651-781)
[»] chr7 (41 HSPs)
chr7 (12-139)||(14219646-14219773)
chr7 (12-142)||(19557958-19558088)
chr7 (19-142)||(15096325-15096448)
chr7 (24-142)||(16077610-16077728)
chr7 (12-142)||(15139411-15139542)
chr7 (19-142)||(13133007-13133130)
chr7 (58-142)||(13133236-13133320)
chr7 (19-142)||(48809169-48809292)
chr7 (79-142)||(14929026-14929089)
chr7 (79-142)||(15352492-15352555)
chr7 (19-131)||(22000902-22001015)
chr7 (88-142)||(1489934-1489988)
chr7 (88-142)||(14258687-14258741)
chr7 (88-142)||(16460595-16460649)
chr7 (88-142)||(16579995-16580049)
chr7 (88-142)||(16585614-16585668)
chr7 (88-142)||(32301517-32301571)
chr7 (18-120)||(8135760-8135862)
chr7 (88-138)||(20487782-20487832)
chr7 (88-140)||(33001252-33001303)
chr7 (12-140)||(11053922-11054050)
chr7 (88-128)||(32434253-32434293)
chr7 (58-132)||(4071024-4071098)
chr7 (80-140)||(46386782-46386843)
chr7 (88-128)||(12371624-12371664)
chr7 (88-128)||(12465923-12465963)
chr7 (88-128)||(13148135-13148175)
chr7 (88-128)||(19282441-19282481)
chr7 (88-128)||(20585705-20585745)
chr7 (88-128)||(44374295-44374335)
chr7 (88-128)||(44383160-44383200)
chr7 (79-137)||(12465954-12466013)
chr7 (79-140)||(12127858-12127920)
chr7 (79-140)||(20585652-20585714)
chr7 (88-128)||(11066817-11066857)
chr7 (88-128)||(12127827-12127867)
chr7 (79-115)||(13148166-13148202)
chr7 (88-128)||(14928995-14929035)
chr7 (88-128)||(15352461-15352501)
chr7 (79-115)||(19282414-19282450)
chr7 (88-128)||(46386750-46386790)
[»] chr2 (24 HSPs)
chr2 (12-142)||(3539028-3539159)
chr2 (12-142)||(22259261-22259391)
chr2 (12-142)||(44071780-44071910)
chr2 (12-142)||(25141375-25141505)
chr2 (58-142)||(25141185-25141269)
chr2 (88-142)||(9784917-9784971)
chr2 (12-142)||(27851867-27851997)
chr2 (88-141)||(23069113-23069166)
chr2 (61-142)||(27860573-27860654)
chr2 (12-114)||(10897172-10897273)
chr2 (58-120)||(18391008-18391070)
chr2 (79-140)||(23969317-23969379)
chr2 (79-140)||(27485164-27485226)
chr2 (88-128)||(5031793-5031833)
chr2 (88-128)||(23969286-23969326)
chr2 (88-128)||(24515535-24515575)
chr2 (88-128)||(27485133-27485173)
chr2 (88-123)||(24781503-24781538)
chr2 (79-140)||(5031824-5031886)
chr2 (79-140)||(9975224-9975286)
chr2 (79-140)||(17306783-17306845)
chr2 (88-128)||(17306836-17306876)
chr2 (79-115)||(28653196-28653232)
chr2 (88-128)||(36839520-36839560)
[»] chr5 (13 HSPs)
chr5 (24-142)||(21618685-21618803)
chr5 (24-142)||(29914563-29914681)
chr5 (58-142)||(20565699-20565783)
chr5 (77-142)||(32608056-32608121)
chr5 (77-142)||(36509508-36509573)
chr5 (58-138)||(20469804-20469884)
chr5 (18-142)||(21406323-21406447)
chr5 (89-142)||(20565889-20565942)
chr5 (77-128)||(32608016-32608067)
chr5 (77-128)||(36509468-36509519)
chr5 (88-128)||(19920983-19921023)
chr5 (79-115)||(19920956-19920992)
chr5 (88-128)||(32607987-32608027)
[»] scaffold0008 (1 HSPs)
scaffold0008 (12-142)||(136250-136380)
[»] chr8 (23 HSPs)
chr8 (12-142)||(22318588-22318718)
chr8 (25-142)||(45471104-45471221)
chr8 (19-142)||(20024923-20025045)
chr8 (12-142)||(31723242-31723372)
chr8 (61-142)||(36728007-36728088)
chr8 (58-142)||(31723478-31723562)
chr8 (79-142)||(6102446-6102509)
chr8 (18-121)||(36727793-36727896)
chr8 (88-142)||(5760868-5760922)
chr8 (12-140)||(22244695-22244822)
chr8 (12-140)||(23947492-23947618)
chr8 (88-142)||(21346062-21346116)
chr8 (77-142)||(20084329-20084394)
chr8 (88-142)||(23914259-23914313)
chr8 (24-103)||(9489-9568)
chr8 (86-139)||(23889017-23889070)
chr8 (88-128)||(6102415-6102455)
chr8 (88-128)||(20179184-20179224)
chr8 (88-128)||(39936673-39936713)
chr8 (88-128)||(42818570-42818610)
chr8 (88-123)||(19140119-19140154)
chr8 (79-140)||(39936704-39936766)
chr8 (79-115)||(42818601-42818637)
[»] scaffold0251 (1 HSPs)
scaffold0251 (12-142)||(20657-20787)
[»] scaffold1186 (2 HSPs)
scaffold1186 (58-142)||(856-940)
scaffold1186 (88-142)||(1046-1100)
[»] scaffold0529 (2 HSPs)
scaffold0529 (58-142)||(7632-7716)
scaffold0529 (95-142)||(7823-7870)
[»] scaffold0005 (2 HSPs)
scaffold0005 (58-142)||(187328-187412)
scaffold0005 (88-142)||(187168-187222)
[»] chr4 (24 HSPs)
chr4 (58-142)||(9638106-9638190)
chr4 (58-142)||(14629971-14630055)
chr4 (58-142)||(16026767-16026851)
chr4 (79-142)||(3485206-3485269)
chr4 (88-142)||(53631136-53631190)
chr4 (79-136)||(19734587-19734644)
chr4 (89-142)||(16026620-16026673)
chr4 (79-140)||(33243950-33244011)
chr4 (86-140)||(4615772-4615826)
chr4 (88-142)||(14630161-14630215)
chr4 (79-140)||(25090949-25091011)
chr4 (88-128)||(3485260-3485300)
chr4 (88-128)||(10357099-10357139)
chr4 (88-128)||(16997879-16997919)
chr4 (88-128)||(19609673-19609713)
chr4 (88-128)||(19734635-19734675)
chr4 (88-128)||(42875148-42875188)
chr4 (88-142)||(13036440-13036494)
chr4 (79-140)||(14548922-14548984)
chr4 (79-140)||(19609620-19609682)
chr4 (79-140)||(42875095-42875157)
chr4 (88-120)||(11425312-11425344)
chr4 (88-128)||(14548975-14549015)
chr4 (88-128)||(25091002-25091042)
[»] chr3 (54 HSPs)
chr3 (58-142)||(11192226-11192310)
chr3 (12-142)||(11562908-11563038)
chr3 (58-142)||(11562714-11562798)
chr3 (19-142)||(17258865-17258988)
chr3 (67-142)||(6155923-6155998)
chr3 (79-142)||(42353367-42353430)
chr3 (88-142)||(14441503-14441557)
chr3 (88-142)||(17046497-17046551)
chr3 (88-142)||(54876146-54876200)
chr3 (77-142)||(13519578-13519643)
chr3 (88-142)||(11192416-11192470)
chr3 (58-140)||(13179433-13179515)
chr3 (88-142)||(17691468-17691522)
chr3 (88-142)||(19569032-19569086)
chr3 (88-139)||(18700136-18700187)
chr3 (88-138)||(12470141-12470191)
chr3 (88-138)||(14671163-14671213)
chr3 (88-138)||(14682662-14682712)
chr3 (88-142)||(17685506-17685560)
chr3 (88-142)||(43889462-43889516)
chr3 (88-141)||(6156042-6156095)
chr3 (88-142)||(9511828-9511882)
chr3 (88-142)||(9519803-9519857)
chr3 (79-140)||(17519567-17519629)
chr3 (79-140)||(17534429-17534491)
chr3 (12-75)||(45531251-45531314)
chr3 (79-140)||(5206348-5206410)
chr3 (79-140)||(11258763-11258825)
chr3 (79-140)||(15932201-15932263)
chr3 (79-140)||(17693364-17693426)
chr3 (79-140)||(40807292-40807354)
chr3 (79-140)||(44273770-44273832)
chr3 (88-128)||(5206317-5206357)
chr3 (88-128)||(11258816-11258856)
chr3 (88-128)||(15932170-15932210)
chr3 (88-128)||(17519536-17519576)
chr3 (88-128)||(17534398-17534438)
chr3 (88-128)||(17538456-17538496)
chr3 (88-128)||(17693417-17693457)
chr3 (88-128)||(22307246-22307286)
chr3 (88-128)||(35065243-35065283)
chr3 (88-128)||(35353948-35353988)
chr3 (88-128)||(40807345-40807385)
chr3 (88-128)||(41173034-41173074)
chr3 (88-128)||(42353336-42353376)
chr3 (88-128)||(44273823-44273863)
chr3 (86-141)||(16059520-16059575)
chr3 (79-140)||(17538403-17538465)
chr3 (86-136)||(20417374-20417424)
chr3 (79-140)||(22307277-22307339)
chr3 (79-140)||(41173065-41173127)
chr3 (88-128)||(2842125-2842165)
chr3 (88-128)||(14508197-14508237)
chr3 (89-141)||(16050137-16050189)
[»] chr6 (30 HSPs)
chr6 (58-136)||(23497592-23497670)
chr6 (58-136)||(23491994-23492072)
chr6 (58-142)||(23500916-23501000)
chr6 (12-140)||(22212139-22212268)
chr6 (12-140)||(31735556-31735683)
chr6 (24-141)||(6083433-6083550)
chr6 (77-142)||(23655673-23655738)
chr6 (88-142)||(19655892-19655946)
chr6 (88-142)||(19773372-19773426)
chr6 (88-142)||(23491834-23491888)
chr6 (88-142)||(23497432-23497486)
chr6 (79-142)||(15705265-15705328)
chr6 (88-142)||(22806168-22806222)
chr6 (79-142)||(28947679-28947742)
chr6 (81-126)||(23655628-23655673)
chr6 (88-128)||(17318785-17318825)
chr6 (79-140)||(7827268-7827330)
chr6 (79-140)||(15891397-15891459)
chr6 (79-140)||(23150960-23151022)
chr6 (79-140)||(31734004-31734066)
chr6 (88-128)||(18702913-18702953)
chr6 (88-128)||(18708848-18708888)
chr6 (88-128)||(23150929-23150969)
chr6 (88-128)||(27126140-27126180)
chr6 (77-128)||(23655727-23655778)
chr6 (79-140)||(18708795-18708857)
chr6 (91-128)||(15891369-15891406)
chr6 (88-128)||(7827321-7827361)
chr6 (88-128)||(27318218-27318258)
chr6 (77-136)||(27318247-27318307)
[»] scaffold0241 (4 HSPs)
scaffold0241 (61-142)||(1680-1761)
scaffold0241 (37-142)||(4833-4938)
scaffold0241 (89-142)||(5023-5076)
scaffold0241 (89-142)||(1870-1923)
[»] scaffold0028 (1 HSPs)
scaffold0028 (12-142)||(3721-3851)
[»] scaffold0371 (1 HSPs)
scaffold0371 (58-142)||(16893-16977)
[»] scaffold0207 (2 HSPs)
scaffold0207 (79-142)||(15203-15266)
scaffold0207 (88-128)||(15172-15212)
[»] scaffold0146 (2 HSPs)
scaffold0146 (79-142)||(22353-22416)
scaffold0146 (88-128)||(22407-22447)
[»] scaffold0077 (2 HSPs)
scaffold0077 (79-142)||(33645-33708)
scaffold0077 (88-128)||(33699-33739)
[»] scaffold0019 (2 HSPs)
scaffold0019 (79-142)||(29453-29516)
scaffold0019 (88-128)||(29507-29547)
[»] chr1 (25 HSPs)
chr1 (79-142)||(14238306-14238369)
chr1 (79-142)||(51082511-51082574)
chr1 (77-142)||(38887819-38887884)
chr1 (79-142)||(7052749-7052812)
chr1 (58-142)||(13302076-13302160)
chr1 (79-142)||(21239949-21240012)
chr1 (88-128)||(4596508-4596548)
chr1 (68-131)||(7321491-7321554)
chr1 (77-128)||(38887779-38887830)
chr1 (79-140)||(42912346-42912408)
chr1 (88-142)||(51323610-51323664)
chr1 (88-128)||(7052718-7052758)
chr1 (88-128)||(14238275-14238315)
chr1 (88-128)||(16058977-16059017)
chr1 (88-128)||(42912399-42912439)
chr1 (88-128)||(51082565-51082605)
chr1 (79-140)||(16059008-16059070)
chr1 (79-140)||(21046743-21046805)
chr1 (86-140)||(52983437-52983491)
chr1 (88-128)||(20588028-20588068)
chr1 (88-128)||(20592566-20592606)
chr1 (88-128)||(20634298-20634338)
chr1 (88-128)||(21046712-21046752)
chr1 (92-128)||(41227371-41227407)
chr1 (86-138)||(51476270-51476322)
[»] scaffold0056 (1 HSPs)
scaffold0056 (12-142)||(66300-66430)
[»] scaffold0439 (2 HSPs)
scaffold0439 (77-142)||(11455-11520)
scaffold0439 (88-142)||(3754-3808)
[»] scaffold0546 (4 HSPs)
scaffold0546 (79-142)||(11090-11153)
scaffold0546 (79-142)||(7270-7333)
scaffold0546 (88-128)||(7324-7364)
scaffold0546 (88-128)||(11144-11184)
[»] scaffold0205 (1 HSPs)
scaffold0205 (83-142)||(29905-29964)
[»] scaffold0109 (4 HSPs)
scaffold0109 (79-142)||(671-734)
scaffold0109 (79-142)||(5974-6037)
scaffold0109 (88-128)||(640-680)
scaffold0109 (88-128)||(5943-5983)
[»] scaffold0039 (2 HSPs)
scaffold0039 (79-142)||(10623-10686)
scaffold0039 (88-128)||(10592-10632)
[»] scaffold0026 (2 HSPs)
scaffold0026 (79-142)||(146028-146091)
scaffold0026 (88-128)||(146082-146122)
[»] scaffold1283 (1 HSPs)
scaffold1283 (88-142)||(1130-1184)
[»] scaffold0061 (2 HSPs)
scaffold0061 (88-142)||(15249-15303)
scaffold0061 (88-142)||(24307-24361)
[»] scaffold0859 (1 HSPs)
scaffold0859 (19-131)||(3981-4094)
[»] scaffold0628 (2 HSPs)
scaffold0628 (12-112)||(4162-4260)
scaffold0628 (12-112)||(8722-8820)
[»] scaffold1633 (2 HSPs)
scaffold1633 (86-142)||(503-559)
scaffold1633 (88-128)||(554-594)
[»] scaffold0047 (2 HSPs)
scaffold0047 (83-142)||(78357-78416)
scaffold0047 (88-128)||(78414-78454)
[»] scaffold0292 (1 HSPs)
scaffold0292 (88-142)||(6848-6902)
[»] scaffold0018 (1 HSPs)
scaffold0018 (88-142)||(20987-21041)
[»] scaffold0002 (1 HSPs)
scaffold0002 (58-140)||(127473-127555)
[»] scaffold0113 (1 HSPs)
scaffold0113 (87-142)||(34564-34619)
[»] scaffold0575 (1 HSPs)
scaffold0575 (88-138)||(5989-6039)
[»] scaffold0232 (1 HSPs)
scaffold0232 (88-138)||(3609-3659)
[»] scaffold0096 (1 HSPs)
scaffold0096 (88-142)||(21403-21457)
[»] scaffold0409 (2 HSPs)
scaffold0409 (28-140)||(519-630)
scaffold0409 (28-140)||(8774-8885)
[»] scaffold0520 (1 HSPs)
scaffold0520 (60-142)||(140-222)
[»] scaffold0021 (1 HSPs)
scaffold0021 (88-142)||(168772-168826)
[»] scaffold0452 (1 HSPs)
scaffold0452 (88-142)||(13328-13382)
[»] scaffold0034 (1 HSPs)
scaffold0034 (88-142)||(120245-120299)
[»] scaffold0017 (1 HSPs)
scaffold0017 (88-142)||(25851-25905)
[»] scaffold0004 (1 HSPs)
scaffold0004 (64-138)||(109458-109532)
[»] scaffold0083 (2 HSPs)
scaffold0083 (88-140)||(645-696)
scaffold0083 (88-140)||(5949-6000)
[»] scaffold0104 (4 HSPs)
scaffold0104 (77-124)||(7533-7580)
scaffold0104 (77-124)||(14164-14211)
scaffold0104 (77-124)||(16566-16613)
scaffold0104 (77-124)||(18586-18633)
[»] scaffold0134 (2 HSPs)
scaffold0134 (79-140)||(9920-9982)
scaffold0134 (88-128)||(9889-9929)
[»] scaffold1276 (1 HSPs)
scaffold1276 (68-125)||(388-445)
[»] scaffold0445 (1 HSPs)
scaffold0445 (99-140)||(2652-2693)
[»] scaffold0181 (1 HSPs)
scaffold0181 (86-139)||(34097-34150)
[»] scaffold1662 (2 HSPs)
scaffold1662 (88-128)||(84-124)
scaffold1662 (79-140)||(115-177)
[»] scaffold0737 (2 HSPs)
scaffold0737 (88-128)||(5376-5416)
scaffold0737 (79-140)||(5407-5469)
[»] scaffold0632 (2 HSPs)
scaffold0632 (88-128)||(514-554)
scaffold0632 (79-115)||(487-523)
[»] scaffold0509 (1 HSPs)
scaffold0509 (88-128)||(9424-9464)
[»] scaffold0384 (2 HSPs)
scaffold0384 (88-128)||(8048-8088)
scaffold0384 (79-115)||(8079-8115)
[»] scaffold0285 (1 HSPs)
scaffold0285 (68-140)||(19004-19076)
[»] scaffold0064 (1 HSPs)
scaffold0064 (88-128)||(58097-58137)
[»] scaffold0338 (1 HSPs)
scaffold0338 (12-75)||(11458-11521)
[»] scaffold1817 (1 HSPs)
scaffold1817 (79-140)||(91-153)
[»] scaffold0413 (1 HSPs)
scaffold0413 (86-136)||(10972-11022)
[»] scaffold0375 (1 HSPs)
scaffold0375 (79-140)||(8997-9059)
[»] scaffold0273 (1 HSPs)
scaffold0273 (86-140)||(6912-6966)
[»] scaffold0098 (1 HSPs)
scaffold0098 (88-142)||(39434-39488)
[»] scaffold0453 (1 HSPs)
scaffold0453 (87-140)||(3327-3380)
[»] scaffold0112 (1 HSPs)
scaffold0112 (68-131)||(2132-2193)
[»] scaffold0111 (2 HSPs)
scaffold0111 (79-115)||(13228-13264)
scaffold0111 (79-115)||(19495-19531)


Alignment Details
Target: scaffold1695 (Bit Score: 123; Significance: 2e-63; HSPs: 1)
Name: scaffold1695
Description:

Target: scaffold1695; HSP #1
Raw Score: 123; E-Value: 2e-63
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 781 - 651
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  781 ttggtctttggggtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 682  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||    
T  681 tattatgtgaatattgtatgatatagaaata 651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 104; Significance: 5e-52; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 139
Target Start/End: Original strand, 14219646 - 14219773
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| | ||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  14219646 ttggtctttggggtaggaatgaaagttgtttataaatatattgttgttcagtgagtctgaattaatatgaatgttgttgttggataatttgagatacata 14219745  T
Q  112 tattatgtgaatattgtatgatatagaa 139  Q
    ||||||||||||||||||||||||||||    
T  14219746 tattatgtgaatattgtatgatatagaa 14219773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 19557958 - 19558088
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||| ||||||||||||||||| ||||| ||||||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||    
T  19557958 ttggtctttggggtaagaatgaaagttgtttataattatattgttgttccgtgagtctaaattaatatgaatgttgttgttggataatttgagatacata 19558057  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||    
T  19558058 tattatgtgaatattgtatgatatagaaata 19558088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 92; E-Value: 7e-45
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 15096325 - 15096448
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 118  Q
    |||| ||||||||||||||||||||| ||| | ||||  |||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  15096325 ttggggtaggaatgaaagttgtttataattgtattgtctttcagtgagtttgaattaatatgaatgttgttgttggataatttgagatacatatattatg 15096424  T
Q  119 tgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||||||||    
T  15096425 tgaatattgtatgatatagaaata 15096448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 16077728 - 16077610
Alignment:
Q  24 gtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaat 123  Q
    ||||||||||||||||||||| || || |||||||||||||||| ||||||| ||||||||||||||||||||||||||| |||||| ||||||||||||    
T  16077728 gtaggaatgaaagttgtttataatcatattgttgttcagtgagtttgaattaatatgaatgttgttgttggataatttgaaatacatgtattatgtgaat 16077629  T
Q  124 attgtatgatatagaaata 142  Q
    |||||||||||||||||||    
T  16077628 attgtatgatatagaaata 16077610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 15139542 - 15139411
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaa-tgttgttgttggataatttgagatacat 110  Q
    ||||| ||||| ||||||||||||||||| ||| ||| | ||||  |||||||||||||||||| |||||| | ||||||||||||||||||||||||||    
T  15139542 ttggtttttggggtaggaatgaaagttgtctataattgtattgtctttcagtgagtctgaattaatatgaaatattgttgttggataatttgagatacat 15139443  T
Q  111 atattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||| |||||||||||||||||||    
T  15139442 atattatgtgaacattgtatgatatagaaata 15139411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 13133007 - 13133130
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 118  Q
    |||| ||||||||| |||||||| || ||||| |||||||  ||||||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||    
T  13133007 ttggggtaggaatggaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatatcgttgttgaataatttgagatacatatattatg 13133106  T
Q  119 tgaatattgtatgatatagaaata 142  Q
    ||||||||||||| |||| |||||    
T  13133107 tgaatattgtatggtatataaata 13133130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 13133236 - 13133320
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| |||||| || ||||||||||||||||||||||||||||||||||||||||||||||||    
T  13133236 ttcagtgagtctgaattaatatgaatattgttgctgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 13133320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 48809169 - 48809292
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 118  Q
    |||| ||||||||  |||||||| || ||||| |||||||  ||||||||||||||| ||||||| ||| |||||| |||||||||| |||||||| |||    
T  48809169 ttggggtaggaatagaagttgttcataattatattgttgtgtagtgagtctgaattaatatgaatattgatgttgggtaatttgagacacatatatgatg 48809268  T
Q  119 tgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||||||||    
T  48809269 tgaatattgtatgatatagaaata 48809292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 14929026 - 14929089
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14929026 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14929089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 15352492 - 15352555
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15352492 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 15352555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 131
Target Start/End: Original strand, 22000902 - 22001015
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctg-aattattatgaatgttgttgttggataatttgagatacatatattat 117  Q
    |||| |||||||||||||||| |||| ||| |||||   | ||||||||||| |||||||||||||  |||||||||||||||||  |||||||||||||    
T  22000902 ttggggtaggaatgaaagttgcttataattgtgttgccttacagtgagtctgtaattattatgaatactgttgttggataatttggaatacatatattat 22001001  T
Q  118 gtgaatattgtatg 131  Q
    ||||||||| ||||    
T  22001002 gtgaatattatatg 22001015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 1489934 - 1489988
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  1489934 ttgttggataatttgatatacatatattatgtgaatattgtatgatatagaaata 1489988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 14258741 - 14258687
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14258741 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14258687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 16460595 - 16460649
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16460595 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16460649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 16580049 - 16579995
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16580049 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16579995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 16585614 - 16585668
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16585614 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16585668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 32301571 - 32301517
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32301571 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 32301517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 18 - 120
Target Start/End: Original strand, 8135760 - 8135862
Alignment:
Q  18 tttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattat 117  Q
    ||||| ||||||||||||||||| ||| ||| | ||||  | |||||||| ||||||| ||||||| |||||||||||||| |||| |||||  ||||||    
T  8135760 tttggggtaggaatgaaagttgtatataattgtattgtcttacagtgagtatgaattaatatgaatattgttgttggataaattgaaatacacctattat 8135859  T
Q  118 gtg 120  Q
    |||    
T  8135860 gtg 8135862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 20487832 - 20487782
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||| ||||||||    
T  20487832 ttgttgaataatttgagatacatatattatgtgaatattgtaagatataga 20487782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 33001303 - 33001252
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||    
T  33001303 ttgttggataatttgagatacatatattatgtgaa-aatgtatgatatagaaa 33001252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 11054050 - 11053922
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| |   | | ||  | |||||| ||| || || ||||| |  ||||||||| ||||||||| ||||||    
T  11054050 ttggtctttggggtaggaatgaaagttgtttataaaggtatagtcttccagtgaatctaaactaatatgactaatgttgttggttaatttgagctacata 11053951  T
Q  112 tattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| | | |||||||||||||||    
T  11053950 tattatgtggaaaatgtatgatatagaaa 11053922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 32434253 - 32434293
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  32434253 ttgttggataatttgaaatacatatattatgtgaatattgt 32434293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 132
Target Start/End: Complemental strand, 4071098 - 4071024
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatga 132  Q
    ||||| ||||||||||||  |||| |  ||||||||| ||||||||||||||||||||||| | | |||||||||    
T  4071098 ttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgaggaaattgtatga 4071024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 80 - 140
Target Start/End: Original strand, 46386782 - 46386843
Alignment:
Q  80 gaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    |||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  46386782 gaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 46386843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 12371664 - 12371624
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  12371664 ttgttggataatttgaaatacatatattatgtgaatgttgt 12371624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 12465923 - 12465963
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  12465923 ttgttggataatttgaaatacatatattatgtgaatgttgt 12465963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 13148135 - 13148175
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  13148135 ttgttggataatttgaaatacatatattatgtgaatgttgt 13148175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 19282481 - 19282441
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  19282481 ttgttggataatttgaaatacatatattatgtgaatgttgt 19282441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 20585745 - 20585705
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  20585745 ttgttggataatttgaaatacatatattatgtgaatgttgt 20585705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 44374335 - 44374295
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  44374335 ttgttggataatttgaaatacatatattatgtgaatgttgt 44374295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 44383200 - 44383160
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  44383200 ttgttggataatttgaaatacatatattatgtgaatgttgt 44383160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 79 - 137
Target Start/End: Original strand, 12465954 - 12466013
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatag 137  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | ||||||||||||    
T  12465954 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatag 12466013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 12127858 - 12127920
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  12127858 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 12127920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 20585714 - 20585652
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  20585714 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 20585652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 11066857 - 11066817
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||||||  |||||||||||||||||| ||||    
T  11066857 ttgttggataatttgaagtacatatattatgtgaatgttgt 11066817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 12127827 - 12127867
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||| ||||||||||||| ||||    
T  12127827 ttgttggataatttgaaatacacatattatgtgaatgttgt 12127867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 13148166 - 13148202
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  13148166 tgaatgttgttgttgaataatttgagttacatatatt 13148202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 14928995 - 14929035
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||| |||| ||||||||||||||||||| ||||    
T  14928995 ttgttggataacttgaaatacatatattatgtgaatgttgt 14929035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 15352461 - 15352501
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||| |||| ||||||||||||||||||| ||||    
T  15352461 ttgttggataacttgaaatacatatattatgtgaatgttgt 15352501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 19282450 - 19282414
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  19282450 tgaatgttgttgttgaataatttgagttacatatatt 19282414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 46386750 - 46386790
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| |||||||||||||| |||| ||||    
T  46386750 ttgttggataatttgaaatacatatattatgcgaatgttgt 46386790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 5e-52; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 3539159 - 3539028
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtga-gtctgaattattatgaatgttgttgttggataatttgagatacat 110  Q
    ||||| ||||| ||||||||||||||||||||| ||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||    
T  3539159 ttggtctttggggtaggaatgaaagttgtttataattatattgttgttcagtgaagtctgaattaatatgaatgttgttgttggataatttgagatacat 3539060  T
Q  111 atattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||||||||||||||||    
T  3539059 atattatgtgaatattgtatgatatagaaata 3539028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 22259391 - 22259261
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| ||| | ||||  |||||||||||||||||| ||||||| |||||| | ||||||||||||| ||||    
T  22259391 ttggtctttggggtaggaatgaaagttgtttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgctagataatttgagatgcata 22259292  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||    
T  22259291 tattatgtgaatattgtatgatatagaaata 22259261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 44071910 - 44071780
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||| ||||||||||| ||| | ||||  ||||||||||||||||||  |||| | |||||||||||||||||||||||||||    
T  44071910 ttggtctttggggtaggaatgtaagttgtttataattgtattgtctttcagtgagtctgaattaacatgattattgttgttggataatttgagatacata 44071811  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||| | |||||||||||||||||||    
T  44071810 tattatgtggaaattgtatgatatagaaata 44071780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 25141505 - 25141375
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| |||| |||||||||||||||| ||| | ||||  |||| ||||||||||||| ||| | | ||||||||| |||||||||||||||||    
T  25141505 ttggtctttggggtagaaatgaaagttgtttataattgtattgtctttcactgagtctgaattaatataattattgttgttgaataatttgagatacata 25141406  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| |||||||||||||||    
T  25141405 tattatgtgaatattttatgatatagaaata 25141375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 25141269 - 25141185
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||| |||||  |||||| ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  25141269 ttcagtgagtctaaattaacatgaatattgttgttgaataatttgagatacatatattatgtgaatattatatgatatagaaata 25141185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 9784971 - 9784917
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9784971 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 9784917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 27851997 - 27851867
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||| ||||| ||||| | | | | ||  |||||||||||||||||| || || | | |||||||| |||||||| |||||||    
T  27851997 ttggtctttggggtaggaatggaagttctttataaatgtatagtctttcagtgagtctgaattaataagattatagttgttggttaatttgaaatacata 27851898  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||| | |||||||||||||||||||    
T  27851897 tattatgtggaaattgtatgatatagaaata 27851867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 141
Target Start/End: Original strand, 23069113 - 23069166
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaat 141  Q
    |||||| |||||||||||||||||||||||||||||||| ||||||||||||||    
T  23069113 ttgttgaataatttgagatacatatattatgtgaatattttatgatatagaaat 23069166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 27860654 - 27860573
Alignment:
Q  61 agtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||| |  ||||||||| ||| |||||||| |||||||||||| | |||||||||||||||||||    
T  27860654 agtgagtctgaattaatatgattaatgttgttggttaaattgagatagatatattatgtggaaattgtatgatatagaaata 27860573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 12 - 114
Target Start/End: Original strand, 10897172 - 10897273
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||| ||| ||||||||||||| ||||| ||    |||||||||||||||||| ||||||| ||||||||| |||| |||||||| |||    
T  10897172 ttggtctttggggtaagaaggaaagttgtttataattatattagctttcagtgagtctgaattaatatgaatattgttgttgaataa-ttgagatatata 10897270  T
Q  112 tat 114  Q
    |||    
T  10897271 tat 10897273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 58 - 120
Target Start/End: Original strand, 18391008 - 18391070
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtg 120  Q
    |||||||||||| ||||| ||||| | || ||||||| ||||||||| |||||||||||||||    
T  18391008 ttcagtgagtctaaattaatatgattatttttgttggttaatttgagctacatatattatgtg 18391070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 23969317 - 23969379
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  23969317 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 23969379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 27485164 - 27485226
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  27485164 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 27485226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 5031793 - 5031833
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  5031793 ttgttggataatttgaaatacatatattatgtgaatgttgt 5031833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 23969286 - 23969326
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  23969286 ttgttggataatttgaaatacatatattatgtgaatgttgt 23969326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 24515575 - 24515535
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  24515575 ttgttggataatttgaaatacatatattatgtgaatgttgt 24515535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 27485133 - 27485173
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  27485133 ttgttggataatttgaaatacatatattatgtgaatgttgt 27485173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 123
Target Start/End: Original strand, 24781503 - 24781538
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaat 123  Q
    |||||||||||||||| |||||||||||||||||||    
T  24781503 ttgttggataatttgaaatacatatattatgtgaat 24781538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 5031824 - 5031886
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  5031824 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 5031886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 9975286 - 9975224
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatat-tatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| ||||||||| |||||| | | |||||| ||||||||    
T  9975286 tgaatgttgttgttgaataatttgagttacatatatatatgtggaaaatgtatggtatagaaa 9975224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 17306845 - 17306783
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  17306845 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 17306783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 17306876 - 17306836
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  17306876 ttgttggataatttgaaatacatttattatgtgaatgttgt 17306836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 28653196 - 28653232
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  28653196 tgaatgttgttgttgaataatttgagttacatatatt 28653232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 36839560 - 36839520
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  36839560 ttgttggataatttgaaatacatttattatgtgaatgttgt 36839520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 5e-49; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 5e-49
Query Start/End: Original strand, 24 - 142
Target Start/End: Original strand, 21618685 - 21618803
Alignment:
Q  24 gtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaat 123  Q
    ||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||    
T  21618685 gtaggaatggaagttgtttataattatgttgttgttcagtgagtctgaattattatgaatattcttgttggataatttgagataaatatattatgtgaat 21618784  T
Q  124 attgtatgatatagaaata 142  Q
    |||||||||||||||||||    
T  21618785 attgtatgatatagaaata 21618803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 24 - 142
Target Start/End: Complemental strand, 29914681 - 29914563
Alignment:
Q  24 gtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaat 123  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||||||| ||||||||||||| |||||| ||||||||||||||||||||| ||||    
T  29914681 gtaggaatgaaagtggtttataattatattgttgttcagtgagtctgaattaatatgaatgttgtttttggatgatttgagatacatatattatgcgaat 29914582  T
Q  124 attgtatgatatagaaata 142  Q
    ||||||| |||||||||||    
T  29914581 attgtataatatagaaata 29914563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 20565783 - 20565699
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  20565783 ttcaatgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 20565699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 32608056 - 32608121
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  32608056 tatgaatgttgttgttgaataattttagatacatatattatgtgaatattgtatgatatagaaata 32608121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 36509508 - 36509573
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  36509508 tatgaatgttgttgttgaataatttgaggtacatatattatgtgaatatcgtatgatatagaaata 36509573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 58 - 138
Target Start/End: Original strand, 20469804 - 20469884
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    ||||| ||||||||||||  |||| |  ||||||||| ||||||||||||||||||||||||| | |||||||||||||||    
T  20469804 ttcagagagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatataga 20469884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 18 - 142
Target Start/End: Original strand, 21406323 - 21406447
Alignment:
Q  18 tttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattat 117  Q
    ||||| ||| ||||||||||||| ||| ||| | ||||  | || ||| ||||||||| ||||||   ||||||||| |||||||||||  ||||||||     
T  21406323 tttggggtatgaatgaaagttgtatataattgtattgtcttacaatgaatctgaattaatatgaagtatgttgttgggtaatttgagatgtatatattac 21406422  T
Q  118 gtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||| |||||    
T  21406423 gtgaatattgtatgatatacaaata 21406447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 20565942 - 20565889
Alignment:
Q  89 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  20565942 tgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaata 20565889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 32608016 - 32608067
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  32608016 tatgaatgttgttgttgaataatttgaaatacatatattatatgaatgttgt 32608067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 36509468 - 36509519
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  36509468 tatgaatgttgttgttgaataatttgaaatacatatattatatgaatgttgt 36509519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 19921023 - 19920983
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  19921023 ttgttggataatttgaaatacatatattatgtgaatgttgt 19920983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 19920992 - 19920956
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  19920992 tgaatgttgttgttgaataatttgagttacatatatt 19920956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 32607987 - 32608027
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  32607987 ttgttggataatttgaaatacatatattatatgaatgttgt 32608027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 87; Significance: 7e-42; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 136250 - 136380
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| ||||  ||||| |||||||||||||||||| ||||| | |||| ||||||||||||||||||||||    
T  136250 ttggtctttggggtaggaatgaaagttgtttataattacattgtttttcagtgagtctgaattaatatgattattgtagttggataatttgagatacata 136349  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| |||||||||||||||||||    
T  136350 tattatgtgaaaattgtatgatatagaaata 136380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 83; Significance: 2e-39; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 22318588 - 22318718
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| |||||||||||||||| |||| ||| | ||||  |||||||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  22318588 ttggtttttggggtaggaatgaaagttgcttataattgtattgtctttcagtgagtctgaattaatatgaatattgttgttggataatttgagatacata 22318687  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||| ||| |||||||||||||||||||||    
T  22318688 tattacgtggatattgtatgatatagaaata 22318718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 25 - 142
Target Start/End: Original strand, 45471104 - 45471221
Alignment:
Q  25 taggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaata 124  Q
    ||||||||||||||||| || ||||| |||||||  ||||||||||||||| ||| ||| ||| ||||||||||||||||||||||||||||||||||||    
T  45471104 taggaatgaaagttgttcataattatattgttgtgtagtgagtctgaattaatataaatattgatgttggataatttgagatacatatattatgtgaata 45471203  T
Q  125 ttgtatgatatagaaata 142  Q
    ||||||||||||||||||    
T  45471204 ttgtatgatatagaaata 45471221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 20024923 - 20025045
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 118  Q
    |||| ||||||||| |||||||| || ||||| || ||||  ||||||||||||||| ||||||| ||| ||||||||||||||||||||||||||||||    
T  20024923 ttggggtaggaatggaagttgttcataattatatttttgtgtagtgagtctgaattaatatgaatattgatgttggataatttgagatacatatattatg 20025022  T
Q  119 tgaatattgtatgatatagaaata 142  Q
    ||||||||||||| ||||||||||    
T  20025023 tgaatattgtatg-tatagaaata 20025045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 31723242 - 31723372
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||  ||||||||||| | | | | ||  |||||||||||||||||| ||||||| ||||||||  |||||||||||||||||    
T  31723242 ttggtctttggggtaggaattgaagttgtttataaatgtatagtatttcagtgagtctgaattaatatgaatattgttgttaaataatttgagatacata 31723341  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||    
T  31723342 tattatgtgaatattgtatgatatagaaata 31723372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 36728007 - 36728088
Alignment:
Q  61 agtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36728007 agtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 36728088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 31723478 - 31723562
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||| ||||||| ||||||| ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||    
T  31723478 ttcagtgagtatgaattaatatgaatattgttgttgaataatttgagatacatatattatctgaatattgtatgatatagaaata 31723562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 6102446 - 6102509
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6102446 tgaatgttgttattgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 6102509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 18 - 121
Target Start/End: Original strand, 36727793 - 36727896
Alignment:
Q  18 tttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattat 117  Q
    ||||| ||||||||| ||||||||||| | | | | ||  |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||    
T  36727793 tttggggtaggaatggaagttgtttataaatgtatagtctttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattat 36727892  T
Q  118 gtga 121  Q
    ||||    
T  36727893 gtga 36727896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 5760922 - 5760868
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5760922 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 5760868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 22244822 - 22244695
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||  |||| |  ||||||||| ||| || || ||||||    
T  22244822 ttggtctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaa-ttaagctacata 22244724  T
Q  112 tattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||  | | |||||||||||||||    
T  22244723 tattatgttgaaaatgtatgatatagaaa 22244695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 12 - 140
Target Start/End: Complemental strand, 23947618 - 23947492
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| ||||| |||| |||||||||||||||||||  |||| |  |||| |||| ||| ||||| ||||||    
T  23947618 ttggtctttggggtaggaatgaaagttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgtttttggttaa-ttgagctacata 23947520  T
Q  112 tattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| | | |||||||||||||||    
T  23947519 tattatgtgga-aatgtatgatatagaaa 23947492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 21346062 - 21346116
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21346062 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 21346116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 20084329 - 20084394
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||| |||||| |||||||||| ||||||||||||||||||||||||||||||| |||||    
T  20084329 tatgaatgttcttgttgaataatttgaggtacatatattatgtgaatattgtatgatataaaaata 20084394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 23914313 - 23914259
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  23914313 ttgttgaataatttgagatacatatattatgtgaatgttgtatgatatagaaata 23914259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 24 - 103
Target Start/End: Complemental strand, 9568 - 9489
Alignment:
Q  24 gtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttga 103  Q
    ||||||||||||||||||||| | ||| |||| ||||||||||||||||| | |||| ||  |||||||| |||||||||    
T  9568 gtaggaatgaaagttgtttataactatattgtagttcagtgagtctgaatcagtatggataatgttgttgaataatttga 9489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Complemental strand, 23889070 - 23889017
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaa 139  Q
    ||||||||| ||||||||| ||||||||||||||| | | ||||||||||||||    
T  23889070 tgttgttggttaatttgagctacatatattatgtggaaaatgtatgatatagaa 23889017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 6102415 - 6102455
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  6102415 ttgttggataatttgaaatacatatattatgtgaatgttgt 6102455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20179184 - 20179224
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  20179184 ttgttggataatttgaaatacatatattatgtgaatgttgt 20179224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 39936673 - 39936713
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  39936673 ttgttggataatttgaaatacatatattatgtgaatgttgt 39936713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 42818570 - 42818610
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  42818570 ttgttggataatttgaaatacatatattatgtgaatgttgt 42818610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 88 - 123
Target Start/End: Complemental strand, 19140154 - 19140119
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaat 123  Q
    |||||||||||||||| |||||||||||||||||||    
T  19140154 ttgttggataatttgaaatacatatattatgtgaat 19140119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 39936704 - 39936766
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  39936704 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 39936766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 42818601 - 42818637
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  42818601 tgaatgttgttgttgaataatttgagttacatatatt 42818637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0251 (Bit Score: 79; Significance: 4e-37; HSPs: 1)
Name: scaffold0251
Description:

Target: scaffold0251; HSP #1
Raw Score: 79; E-Value: 4e-37
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 20657 - 20787
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| |||   ||||  |||||||||||||||||| ||||| | |||| ||||||||||||||||||||||    
T  20657 ttggtctttggggtaggaatgaaagttgtttataattgcattgtctttcagtgagtctgaattaatatgattattgtagttggataatttgagatacata 20756  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| |||||||||||||||||||    
T  20757 tattatgtgaaaattgtatgatatagaaata 20787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold1186
Description:

Target: scaffold1186; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 940 - 856
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  940 ttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1186; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 1100 - 1046
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||| || |||| | ||||||||    
T  1100 ttgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaata 1046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0529
Description:

Target: scaffold0529; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 7716 - 7632
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  7716 ttcagtgagtctgaattaatatgaatgttgttgttgaataattcgagatacatatattatgtgaatattgtatgatatagaaata 7632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0529; HSP #2
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 95 - 142
Target Start/End: Complemental strand, 7870 - 7823
Alignment:
Q  95 ataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||| ||||||||||||| ||||||||||||||||||||||||    
T  7870 ataatttgatatacatatattatttgaatattgtatgatatagaaata 7823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 73; Significance: 2e-33; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 187328 - 187412
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  187328 ttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 187412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 187168 - 187222
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||| || |||| | ||||||||    
T  187168 ttgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaata 187222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 2e-33; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 9638190 - 9638106
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||| ||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  9638190 ttcaatgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 9638106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 14630055 - 14629971
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14630055 ttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14629971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 142
Target Start/End: Original strand, 16026767 - 16026851
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||    
T  16026767 ttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtgtgatatagaaata 16026851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 3485269 - 3485206
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3485269 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 3485206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 53631136 - 53631190
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  53631136 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 53631190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 79 - 136
Target Start/End: Complemental strand, 19734644 - 19734587
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  19734644 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 19734587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 89 - 142
Target Start/End: Original strand, 16026620 - 16026673
Alignment:
Q  89 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  16026620 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 16026673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 33243950 - 33244011
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||| || |||||| ||||||||||||||||||||| ||||||||  ||||||||||||||    
T  33243950 tgaatatttttgttgaataatttgagatacatatattgtgtgaataaggtatgatatagaaa 33244011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 86 - 140
Target Start/End: Original strand, 4615772 - 4615826
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| ||||||||| ||||||||||||||| | | |||||||||||||||    
T  4615772 tgttgttggttaatttgagttacatatattatgtggaaaatgtatgatatagaaa 4615826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 14630215 - 14630161
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||| || |||| | ||||||||    
T  14630215 ttgttggataatttgaaatacatatattatgtgaatgttatatgttgtagaaata 14630161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 25091011 - 25090949
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  25091011 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 25090949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 3485300 - 3485260
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  3485300 ttgttggataatttgaaatacatatattatgtgaatgttgt 3485260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 10357099 - 10357139
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  10357099 ttgttggataatttgaaatacatatattatgtgaatgttgt 10357139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 16997919 - 16997879
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  16997919 ttgttggataatttgaaatacatatattatgtgaatgttgt 16997879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 19609713 - 19609673
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  19609713 ttgttggataatttgaaatacatatattatgtgaatgttgt 19609673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 19734675 - 19734635
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  19734675 ttgttggataatttgaaatacatatattatgtgaatgttgt 19734635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 42875188 - 42875148
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  42875188 ttgttggataatttgaaatacatatattatgtgaatgttgt 42875148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 13036440 - 13036494
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||| | ||||||||||||||||||| ||| ||| | ||||||||    
T  13036440 ttgttggataatttaaaatacatatattatgtgaatgttgaatgttgtagaaata 13036494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 14548984 - 14548922
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatat-tatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| ||||||||| |||||| | |  ||||||||||||||    
T  14548984 tgaatgttgttgttgaataatttgagttacatatatgtatgtggaaaaggtatgatatagaaa 14548922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 19609682 - 19609620
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| ||||||||||  ||||||| ||||||| | | |||||||||||||||    
T  19609682 tgaatgttgttgttgaataatttgagtgacatatatttatgtggaaaatgtatgatatagaaa 19609620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 42875157 - 42875095
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  42875157 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaagtatgatatagaaa 42875095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 120
Target Start/End: Complemental strand, 11425344 - 11425312
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtg 120  Q
    |||||||||||||||| ||||||||||||||||    
T  11425344 ttgttggataatttgaaatacatatattatgtg 11425312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 14549015 - 14548975
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||| ||||||| ||||||||||||||||||| ||||    
T  14549015 ttgttggagaatttgaaatacatatattatgtgaatgttgt 14548975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 25091042 - 25091002
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  25091042 ttgttagataatttgaaatacatatattatgtgaatgttgt 25091002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 73; Significance: 2e-33; HSPs: 54)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 11192310 - 11192226
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  11192310 ttcagtgagtctgaattaatatgaatattgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 11192226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 11563038 - 11562908
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| ||  | ||    |||||||||||||||||| ||||||| |||||||||  ||||||||||||||||    
T  11563038 ttggtctttggggtaggaatgaaagttgtttataatggtattagctttcagtgagtctgaattaatatgaatattgttgttgactaatttgagatacata 11562939  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||    
T  11562938 tattatgtgaatattgaatgatatagaaata 11562908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 11562798 - 11562714
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||||| ||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||    
T  11562798 ttcagtgagtctgaattaatatgaatattgttgttgaataattagagatacatatattatgtgaatattgtatgatatagaaata 11562714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 19 - 142
Target Start/End: Original strand, 17258865 - 17258988
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatg 118  Q
    |||| ||||||||| |||||||| || ||||| | ||| |  ||||||||||||||| ||||||| ||| |||| |||||||| |||||||| |||||||    
T  17258865 ttggggtaggaatgtaagttgttcataattatatagttttgtagtgagtctgaattaatatgaatattgatgttagataatttaagatacatgtattatg 17258964  T
Q  119 tgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||||||||    
T  17258965 tgaatattgtatgatatagaaata 17258988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 67 - 142
Target Start/End: Complemental strand, 6155998 - 6155923
Alignment:
Q  67 tctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||| ||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||    
T  6155998 tctgaattaatatgaatattgttgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaata 6155923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 42353367 - 42353430
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  42353367 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 42353430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 14441557 - 14441503
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14441557 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 14441503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 17046551 - 17046497
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17046551 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 17046497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 54876146 - 54876200
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  54876146 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 54876200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 13519643 - 13519578
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||    
T  13519643 tatgaatgttgttgttgaataatttgaggtacatatattatgtgaatatcgtatgatatagaaata 13519578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 11192470 - 11192416
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  11192470 ttgttggataatttgagatacatttattatgtgaatattgtatgatatagaaata 11192416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Complemental strand, 13179515 - 13179433
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    |||||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||    
T  13179515 ttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaa 13179433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 17691468 - 17691522
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  17691468 ttgttggataatttgatatacatatattatgtgaatattgtatgatatagaaata 17691522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 19569032 - 19569086
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19569032 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 19569086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 88 - 139
Target Start/End: Original strand, 18700136 - 18700187
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaa 139  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  18700136 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaa 18700187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 12470191 - 12470141
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  12470191 ttgttgaataatttgagatacatatattatgtgaatattgtatgatataga 12470141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 14671213 - 14671163
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14671213 ttgttgaataatttgagatacatatattatgtgaatattgtatgatataga 14671163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 14682712 - 14682662
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  14682712 ttgttgaataatttgagatacatatattatgtgaatattgtatgatataga 14682662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 17685506 - 17685560
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  17685506 ttgttggataattagaaatacatatattatgtgaatattgtatgatatagaaata 17685560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 43889462 - 43889516
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||||    
T  43889462 ttgttgaataatttgagatacatatattatgtgaatattgtatgatttagaaata 43889516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 88 - 141
Target Start/End: Complemental strand, 6156095 - 6156042
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaat 141  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||||||||||    
T  6156095 ttgttgaataatttgagatacatatgttatgtgaatattgtatgatatagaaat 6156042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 9511828 - 9511882
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||    
T  9511828 ttgttggataatttgaaatacatatattatgtgaatatggtatgttgtagaaata 9511882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 9519803 - 9519857
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||||| ||||| | ||||||||    
T  9519803 ttgttggataatttgaaatacatatattatgtgaatatggtatgttgtagaaata 9519857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 17519567 - 17519629
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||||||    
T  17519567 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 17519629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 17534429 - 17534491
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| | |||||||||||||||    
T  17534429 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaatgtatgatatagaaa 17534491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 45531251 - 45531314
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaatta 75  Q
    ||||| ||||| |||||||||||||||||| || ||||| ||||  ||||||||||||||||||    
T  45531251 ttggtctttggggtaggaatgaaagttgttcataattatattgtgtttcagtgagtctgaatta 45531314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 5206348 - 5206410
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  5206348 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 5206410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 11258825 - 11258763
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  11258825 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 11258763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 15932201 - 15932263
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatat-attatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||  ||||||| | |||||||||||||||||    
T  15932201 tgaatgttgttgttgaataatttgagttacatatgtttatgtggaaattgtatgatatagaaa 15932263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 17693426 - 17693364
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  17693426 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 17693364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 40807354 - 40807292
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  40807354 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 40807292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 44273832 - 44273770
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  44273832 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 44273770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 5206317 - 5206357
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  5206317 ttgttggataatttgaaatacatatattatgtgaatgttgt 5206357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 11258856 - 11258816
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  11258856 ttgttggataatttgaaatacatatattatgtgaatgttgt 11258816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 15932170 - 15932210
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  15932170 ttgttggataatttgaaatacatatattatgtgaatgttgt 15932210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 17519536 - 17519576
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  17519536 ttgttggataatttgaaatacatatattatgtgaatgttgt 17519576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 17534398 - 17534438
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  17534398 ttgttggataatttgaaatacatatattatgtgaatgttgt 17534438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 17538496 - 17538456
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  17538496 ttgttggataatttgaaatacatatattatgtgaatgttgt 17538456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 17693457 - 17693417
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  17693457 ttgttggataatttgaaatacatatattatgtgaatgttgt 17693417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 22307246 - 22307286
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  22307246 ttgttggataatttgaaatacatatattatgtgaatgttgt 22307286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 35065243 - 35065283
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  35065243 ttgttggataatttgaaatacatatattatgtgaatgttgt 35065283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 35353988 - 35353948
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  35353988 ttgttggataatttgaaatacatatattatgtgaatgttgt 35353948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 40807385 - 40807345
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  40807385 ttgttggataatttgaaatacatatattatgtgaatgttgt 40807345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 41173034 - 41173074
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  41173034 ttgttggataatttgaaatacatatattatgtgaatgttgt 41173074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 42353336 - 42353376
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  42353336 ttgttggataatttgaaatacatatattatgtgaatgttgt 42353376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 44273863 - 44273823
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  44273863 ttgttggataatttgaaatacatatattatgtgaatgttgt 44273823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 86 - 141
Target Start/End: Complemental strand, 16059575 - 16059520
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaat 141  Q
    ||||||||| || ||||| |||||||||||||||| | | ||||||||||||||||    
T  16059575 tgttgttggttattttgaaatacatatattatgtggaaagtgtatgatatagaaat 16059520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 17538465 - 17538403
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  17538465 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 17538403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 20417424 - 20417374
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    ||||||||| ||||||||| ||||||||||||||| | | |||||||||||    
T  20417424 tgttgttggttaatttgagctacatatattatgtggaaaatgtatgatata 20417374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 22307277 - 22307339
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  22307277 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 22307339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 41173065 - 41173127
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| | |||||||| |||||||| ||||||| | | |||||||||||||||    
T  41173065 tgaatgttgttgttgaagaatttgagttacatatatttatgtggaaaatgtatgatatagaaa 41173127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 2842125 - 2842165
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||| ||| ||||||||||||||||||| ||||    
T  2842125 ttgttggataatatgaaatacatatattatgtgaatgttgt 2842165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 14508237 - 14508197
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| |||||| |||||||||||| ||||    
T  14508237 ttgttggataatttgaaatacatttattatgtgaatgttgt 14508197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 89 - 141
Target Start/End: Complemental strand, 16050189 - 16050137
Alignment:
Q  89 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaat 141  Q
    |||||| || ||||| |||||||||||||||| | | ||||||||||||||||    
T  16050189 tgttggttattttgatatacatatattatgtggaaagtgtatgatatagaaat 16050137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 71; Significance: 2e-32; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 23497592 - 23497670
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    |||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23497592 ttcagtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 23497670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 58 - 136
Target Start/End: Original strand, 23491994 - 23492072
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    |||||||||||||||||| ||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  23491994 ttcagtgagtctgaattaatatgaattttgttgttgaataatttgagatacatatattatgtgaatattgtatgatata 23492072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 23501000 - 23500916
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||  |||||||| ||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23501000 ttcagtgatcctgaattaatatgaatattgttgttggataatttgagatacttatattatgtgaatattgtatgatatagaaata 23500916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 22212139 - 22212268
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaat-tattatgaatgttgttgttggataatttgagatacat 110  Q
    ||||| ||||| |||||||||||||| |||||| |||   ||||  | |||||||||||||  || |||||||  ||||||||| |||||||||||||||    
T  22212139 ttggtctttggggtaggaatgaaagtcgtttataattgcattgtcttacagtgagtctgaaagtaatatgaataatgttgttggttaatttgagatacat 22212238  T
Q  111 atattatgtgaatattgtatgatatagaaa 140  Q
    |||||||||||| |||||||||||||||||    
T  22212239 atattatgtgaaaattgtatgatatagaaa 22212268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 12 - 140
Target Start/End: Original strand, 31735556 - 31735683
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||| ||||||||| ||||| |||| |||||||||||||||||||  |||| |  ||||||||| |||||||| |||||||    
T  31735556 ttggtctttggggtaggaatgaa-gttgtttataattatattgtggttcagtgagtctgaattaaaatgattaatgttgttggttaatttgaaatacata 31735654  T
Q  112 tattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| | | ||| |||||||||||    
T  31735655 tattatgtggaaaatgtttgatatagaaa 31735683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 24 - 141
Target Start/End: Original strand, 6083433 - 6083550
Alignment:
Q  24 gtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaat 123  Q
    ||||||||||||||||||||| ||| | || |  |||| ||||||||||||| | |||||  ||||||||||||| |||| || ||||||||||||||||    
T  6083433 gtaggaatgaaagttgtttataattgtattatctttcaatgagtctgaattaatctgaataatgttgttggataaattgaaatgcatatattatgtgaat 6083532  T
Q  124 attgtatgatatagaaat 141  Q
    |||||||| | |||||||    
T  6083533 attgtatgttgtagaaat 6083550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 23655738 - 23655673
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| ||| |||||| |||||||||||||||||||||||||||||||||||||    
T  23655738 tatgaatgttgttgttgaatattttgaggtacatatattatgtgaatattgtatgatatagaaata 23655673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 19655892 - 19655946
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  19655892 ttgttggataattcgagatacatatattatgtgaatattgtatgatatagaaata 19655946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 19773372 - 19773426
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  19773372 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 19773426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 23491834 - 23491888
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23491834 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 23491888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 23497432 - 23497486
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23497432 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 23497486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 15705265 - 15705328
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| || |||||| |||||||||||||||||||||||||||||||||||||||||| |||||    
T  15705265 tgaatatttttgttgaataatttgagatacatatattatgtgaatattgtatgatataaaaata 15705328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 22806222 - 22806168
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  22806222 ttgttgaataatttaagatacatatattatgtgaatattgtatgatatagaaata 22806168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 28947742 - 28947679
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| || |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  28947742 tgaatatttttgttggataatttgaaatacatatattatgtgaatgttgtatgctgtagaaata 28947679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 81 - 126
Target Start/End: Complemental strand, 23655673 - 23655628
Alignment:
Q  81 aatgttgttgttggataatttgagatacatatattatgtgaatatt 126  Q
    ||||||||||||| |||||||||| |||||||||||||||||||||    
T  23655673 aatgttgttgttgaataatttgaggtacatatattatgtgaatatt 23655628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 17318785 - 17318825
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  17318785 ttgttggataatttgaaatacatatattatgtgaatattgt 17318825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 7827330 - 7827268
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| |  ||||||||||||||    
T  7827330 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaaggtatgatatagaaa 7827268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 15891397 - 15891459
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  15891397 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 15891459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 23150960 - 23151022
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  23150960 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 23151022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 31734066 - 31734004
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||||| |  ||||||||||||||    
T  31734066 tgaatgttgttgttgaataatttgagttacatatatttatgtgaaaaaggtatgatatagaaa 31734004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 18702953 - 18702913
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  18702953 ttgttggataatttgaaatacatatattatgtgaatgttgt 18702913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 18708888 - 18708848
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  18708888 ttgttggataatttgaaatacatatattatgtgaatgttgt 18708848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 23150929 - 23150969
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  23150929 ttgttggataatttgaaatacatatattatgtgaatgttgt 23150969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 27126140 - 27126180
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  27126140 ttgttggataatttgaaatacatatattatgtgaatgttgt 27126180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 128
Target Start/End: Complemental strand, 23655778 - 23655727
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||||||| ||||||| | ||||||||||||| ||||| ||||    
T  23655778 tatgaatgttgttgttgaataatttaaaatacatatattatatgaatgttgt 23655727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 18708857 - 18708795
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  18708857 tgaatgttgttgttgaataatttgagttacatatagttatgtggaaaaggtatgatatagaaa 18708795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 91 - 128
Target Start/End: Original strand, 15891369 - 15891406
Alignment:
Q  91 ttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||| ||||||||||||||||||| ||||    
T  15891369 ttggataatttgaaatacatatattatgtgaatgttgt 15891406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 7827361 - 7827321
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||| || ||||||||||||||||||| ||||    
T  7827361 ttgttggataattggaaatacatatattatgtgaatgttgt 7827321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 27318218 - 27318258
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||| ||||| ||||    
T  27318218 ttgttggataatttgaaatacatatattatatgaatgttgt 27318258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 136
Target Start/End: Original strand, 27318247 - 27318307
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatata 136  Q
    ||||||||||||||||| ||||||| || |||||||| ||||||| | | |||||||||||    
T  27318247 tatgaatgttgttgttgaataatttaagttacatatatttatgtggaaaatgtatgatata 27318307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241 (Bit Score: 70; Significance: 1e-31; HSPs: 4)
Name: scaffold0241
Description:

Target: scaffold0241; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 61 - 142
Target Start/End: Complemental strand, 1761 - 1680
Alignment:
Q  61 agtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1761 agtgagtctgaattaatatgaatgttgttgttgaataatttgagatacatatactatgtgaatattgtatgatatagaaata 1680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #2
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 37 - 142
Target Start/End: Complemental strand, 4938 - 4833
Alignment:
Q  37 ttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    |||||||| ||| | ||||  |||||||||||||||||| |||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||    
T  4938 ttgtttataattgtattgtctttcagtgagtctgaattaatatgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtataatata 4839  T
Q  137 gaaata 142  Q
     |||||    
T  4838 taaata 4833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #3
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 5076 - 5023
Alignment:
Q  89 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  5076 tgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 5023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0241; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 89 - 142
Target Start/End: Complemental strand, 1923 - 1870
Alignment:
Q  89 tgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||    
T  1923 tgttgaataatttgagatacatatattgtgtgaatattgtatgatatagaaata 1870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 12 - 142
Target Start/End: Original strand, 3721 - 3851
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| |||||||||||||| |||||  | | | ||||  |||||||| ||||||||| ||||||   ||||||||||||||||||||||||||    
T  3721 ttggtctttggggtaggaatgaaagtcgtttacaaatgtattgtctttcagtgaatctgaattaatatgaagaatgttgttggataatttgagatacata 3820  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||| | |||||||||||||||    
T  3821 tattatgtgaataatatatgatatagaaata 3851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0371 (Bit Score: 61; Significance: 2e-26; HSPs: 1)
Name: scaffold0371
Description:

Target: scaffold0371; HSP #1
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 16977 - 16893
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| |||||| ||||| | |||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  16977 ttcagtgagtcggaattaatatgattattgttgttggataatttgagatacatatattatgtgaaaattgtttgatatagaaata 16893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 15203 - 15266
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  15203 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 15266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 15172 - 15212
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  15172 ttgttggataatttgaaatacatatattatgtgaatgttgt 15212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 22416 - 22353
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  22416 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 22353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 22447 - 22407
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  22447 ttgttggataatttgaaatacatatattatgtgaatgttgt 22407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 33708 - 33645
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33708 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 33645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 33739 - 33699
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||| ||||||||||| ||||    
T  33739 ttgttggataatttgaaatacatacattatgtgaatgttgt 33699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 60; Significance: 9e-26; HSPs: 2)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 29516 - 29453
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29516 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 29453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 29547 - 29507
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  29547 ttgttggataatttgaaatacatatattatgtgaatgttgt 29507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 60; Significance: 9e-26; HSPs: 25)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 14238306 - 14238369
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  14238306 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 14238369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 51082574 - 51082511
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51082574 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 51082511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 142
Target Start/End: Original strand, 38887819 - 38887884
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  38887819 tatgaatgttgttgttgaataatttgaggtacatatattatgtgaatattgtatgatatagaaata 38887884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 7052749 - 7052812
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  7052749 tgaatgttgttgttgaataatttgagatacatatattaggtgaatattgtatgatatagaaata 7052812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 58 - 142
Target Start/End: Complemental strand, 13302160 - 13302076
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||| ||||| |||||||||||  |||||||||||  |||||||||||| | |||||||||||||||||||    
T  13302160 ttcagtgagtctgaattaatatgattgttgttgttgtttaatttgagatctatatattatgtggaaattgtatgatatagaaata 13302076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 21239949 - 21240012
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||| || |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  21239949 tgaatatttttgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaata 21240012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 4596508 - 4596548
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||||||||    
T  4596508 ttgttggataatttgaaatacatatattatgtgaatattgt 4596548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 68 - 131
Target Start/End: Original strand, 7321491 - 7321554
Alignment:
Q  68 ctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatg 131  Q
    |||||||| ||||||| |||| ||| ||||| |||| |||||||||||||||||||||| ||||    
T  7321491 ctgaattaatatgaatattgtcgttagataaattgaaatacatatattatgtgaatattatatg 7321554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 128
Target Start/End: Original strand, 38887779 - 38887830
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||||||||||||||| ||||||||| ||||||||||||| ||||| ||||    
T  38887779 tatgaatgttgttgttgaataatttgaaatacatatattatatgaatgttgt 38887830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Complemental strand, 42912408 - 42912346
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  42912408 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 42912346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 51323664 - 51323610
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| |||||||||||||||||||  |||||| | ||||||||    
T  51323664 ttgttggataatttgaaatacatatattatgtgaatgatgtatgttgtagaaata 51323610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 7052718 - 7052758
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  7052718 ttgttggataatttgaaatacatatattatgtgaatgttgt 7052758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 14238275 - 14238315
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  14238275 ttgttggataatttgaaatacatatattatgtgaatgttgt 14238315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 16058977 - 16059017
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  16058977 ttgttggataatttgaaatacatatattatgtgaatgttgt 16059017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 42912439 - 42912399
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  42912439 ttgttggataatttgaaatacatatattatgtgaatgttgt 42912399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 51082605 - 51082565
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  51082605 ttgttggataatttgaaatacatatattatgtgaatgttgt 51082565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 16059008 - 16059070
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  16059008 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 16059070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 21046743 - 21046805
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatat-tatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| ||||||||| |||||| | |  ||||||||||||||    
T  21046743 tgaatgttgttgttgaataatttgagttacatatatctatgtggaaaaggtatgatatagaaa 21046805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 52983491 - 52983437
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| |||||| || ||||||||||||||| | | |||||||||||||||    
T  52983491 tgttgttggttaatttaagctacatatattatgtggaaaatgtatgatatagaaa 52983437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 20588068 - 20588028
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  20588068 ttgttggataatttgaaagacatatattatgtgaatgttgt 20588028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 20592606 - 20592566
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  20592606 ttgttggataatttgaaagacatatattatgtgaatgttgt 20592566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 20634298 - 20634338
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| || |||||||||||||||| ||||    
T  20634298 ttgttggataatttgaaatgcatatattatgtgaatgttgt 20634338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 21046712 - 21046752
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    ||||| |||||||||| ||||||||||||||||||| ||||    
T  21046712 ttgttagataatttgaaatacatatattatgtgaatgttgt 21046752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 92 - 128
Target Start/End: Original strand, 41227371 - 41227407
Alignment:
Q  92 tggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||| ||||||||||||||||||| ||||    
T  41227371 tggataatttgaaatacatatattatgtgaatgttgt 41227407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 86 - 138
Target Start/End: Complemental strand, 51476322 - 51476270
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    ||||||||| |||||| || ||||||||||||||| | | |||||||||||||    
T  51476322 tgttgttggttaatttaagctacatatattatgtggaaaatgtatgatataga 51476270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 12 - 142
Target Start/End: Complemental strand, 66430 - 66300
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| |   | |  |  |||||||||||||||||| ||||| | |||||||||| ||||||||||||||||    
T  66430 ttggtctttggggtaggaatgaaagttgtttataaaagtataatctttcagtgagtctgaattaatatgattattgttgttggttaatttgagatacata 66331  T
Q  112 tattatgtgaatattgtatgatatagaaata 142  Q
    ||| ||||| | |||||||||||||||||||    
T  66330 tatgatgtggaaattgtatgatatagaaata 66300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439 (Bit Score: 58; Significance: 1e-24; HSPs: 2)
Name: scaffold0439
Description:

Target: scaffold0439; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 77 - 142
Target Start/End: Complemental strand, 11520 - 11455
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||    
T  11520 tatgaatgttgttgttgaataatttgaggtacatatattatgtgaatattgtatgatatagaaata 11455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0439; HSP #2
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 3808 - 3754
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  3808 ttgttggataatttgaaatacatatattatgtgaatattgtatgatatagaaata 3754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: scaffold0546
Description:

Target: scaffold0546; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 11153 - 11090
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  11153 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgacatagaaata 11090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 7333 - 7270
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  7333 tgaatgttgttgttgaataatttgagatacataaattatgtgaatattgtatgatatggaaata 7270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 7364 - 7324
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  7364 ttgttggataatttgaaatacatatattatgtgaatgttgt 7324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0546; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 11184 - 11144
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  11184 ttgttggataatttgaaatacatatattatgtgaatgttgt 11144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0205 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0205
Description:

Target: scaffold0205; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 29964 - 29905
Alignment:
Q  83 tgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  29964 tgttgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 29905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 56; Significance: 2e-23; HSPs: 4)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 671 - 734
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||    
T  671 tgaatgttgttgttgaataatttgagatacatatattatgtgaatattgtatgacatagaaata 734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 5974 - 6037
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||    
T  5974 tgaatgttgttgttgaataatttgagatacataaattatgtgaatattgtatgatatggaaata 6037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 640 - 680
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  640 ttgttggataatttgaaatacatatattatgtgaatgttgt 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 5943 - 5983
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  5943 ttgttggataatttgaaatacatatattatgtgaatgttgt 5983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Original strand, 10623 - 10686
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  10623 tgaatgttgttattgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 10686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 10592 - 10632
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  10592 ttgttggataatttgaaatacatatattatgtgaatgttgt 10632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 56; Significance: 2e-23; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 79 - 142
Target Start/End: Complemental strand, 146091 - 146028
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  146091 tgaatgttgttgttgattaatttgagatacatatattatgtgaatattgtatgatatagaaata 146028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 146122 - 146082
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  146122 ttgttggataatttgaaatacatatattatgtgaatgttgt 146082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1283 (Bit Score: 55; Significance: 9e-23; HSPs: 1)
Name: scaffold1283
Description:

Target: scaffold1283; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 1130 - 1184
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1130 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 1184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 55; Significance: 9e-23; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 15249 - 15303
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15249 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 15303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 24307 - 24361
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  24307 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 24361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0859 (Bit Score: 54; Significance: 3e-22; HSPs: 1)
Name: scaffold0859
Description:

Target: scaffold0859; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 19 - 131
Target Start/End: Complemental strand, 4094 - 3981
Alignment:
Q  19 ttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaat-tattatgaatgttgttgttggataatttgagatacatatattat 117  Q
    |||| |||||||||||||||| |||| ||| |||||   | ||||||||| |||  || ||||||| ||||||||||||||||||| |||||||||||||    
T  4094 ttggggtaggaatgaaagttgcttataattgtgttgccttgcagtgagtcagaaagtaatatgaatattgttgttggataatttgaaatacatatattat 3995  T
Q  118 gtgaatattgtatg 131  Q
    ||||||||||||||    
T  3994 gtgaatattgtatg 3981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628 (Bit Score: 54; Significance: 3e-22; HSPs: 2)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 4162 - 4260
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| |||  || ||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  4162 ttggtctttggggtaggaatgaaagttgtttataatt--gtagtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacata 4259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0628; HSP #2
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 12 - 112
Target Start/End: Original strand, 8722 - 8820
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacata 111  Q
    ||||| ||||| ||||||||||||||||||||| |||  || ||  |||||||||||||||||| ||||||  |||||||||||||||||||||||||||    
T  8722 ttggtctttggggtaggaatgaaagttgtttataatt--gtagtctttcagtgagtctgaattaatatgaagattgttgttggataatttgagatacata 8819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633 (Bit Score: 53; Significance: 1e-21; HSPs: 2)
Name: scaffold1633
Description:

Target: scaffold1633; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 86 - 142
Target Start/End: Complemental strand, 559 - 503
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  559 tgttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1633; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 594 - 554
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||| ||||||| ||||    
T  594 ttgttggataatttgaaatacatatattttgtgaatgttgt 554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 52; Significance: 5e-21; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 83 - 142
Target Start/End: Complemental strand, 78416 - 78357
Alignment:
Q  83 tgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  78416 tgttgttgttgaataatttgagatacatatattatgtgaatattgtatggtatagaaata 78357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 78454 - 78414
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  78454 ttgttggataatttgaaatacatatattatgtgaatgttgt 78414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0292 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 6902 - 6848
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6902 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 6848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 21041 - 20987
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  21041 ttgttgaataatttgagatacatatattatgtgaatattgtatgatatagaaata 20987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 58 - 140
Target Start/End: Original strand, 127473 - 127555
Alignment:
Q  58 ttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    |||||||||||| ||||| ||||| | |||||||||| ||||||||| ||||||||||||||||| | |||||||||||||||    
T  127473 ttcagtgagtctaaattaatatgattattgttgttggttaatttgagctacatatattatgtgaaaaatgtatgatatagaaa 127555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0113 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0113
Description:

Target: scaffold0113; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 87 - 142
Target Start/End: Complemental strand, 34619 - 34564
Alignment:
Q  87 gttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||    
T  34619 gttgttggataatttgagatacatgtattatgtgaatattttatgatatagaaata 34564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0575 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0575
Description:

Target: scaffold0575; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 138
Target Start/End: Original strand, 5989 - 6039
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  5989 ttgttgaataatttgagatacatatattatgtgaatattgtatgatataga 6039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0232 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0232
Description:

Target: scaffold0232; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 138
Target Start/End: Complemental strand, 3659 - 3609
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  3659 ttgttgaataatttgagatacatatattatgtgaatattgtatgatataga 3609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 21457 - 21403
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| |||||||||||||||||||||||||||||||| |||||||||||||||    
T  21457 ttgttgaataatttgagatacatatattatgtgaatattttatgatatagaaata 21403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409 (Bit Score: 45; Significance: 8e-17; HSPs: 2)
Name: scaffold0409
Description:

Target: scaffold0409; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 630 - 519
Alignment:
Q  28 gaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattg 127  Q
    ||||||||||||||||| |||||  ||| ||||||||||| |||||||  |||| |  |||||||||  |||||||| ||||||||||||||| | | ||    
T  630 gaatgaaagttgtttataattatactgtggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatgtggaaaatg 532  T
Q  128 tatgatatagaaa 140  Q
    |||||||||||||    
T  531 tatgatatagaaa 519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0409; HSP #2
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 28 - 140
Target Start/End: Complemental strand, 8885 - 8774
Alignment:
Q  28 gaatgaaagttgtttattattatgttgttgttcagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattg 127  Q
    ||||||||||||||||| |||||  ||| ||||||||||| |||||||  |||| |  |||||||||  |||||||| ||||||||||||||| | | ||    
T  8885 gaatgaaagttgtttataattatactgtggttcagtgagtttgaattaa-atgattaatgttgttggtaaatttgagctacatatattatgtggaaaatg 8787  T
Q  128 tatgatatagaaa 140  Q
    |||||||||||||    
T  8786 tatgatatagaaa 8774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0520 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0520
Description:

Target: scaffold0520; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 142
Target Start/End: Original strand, 140 - 222
Alignment:
Q  60 cagtgagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||| |||||||||||||| || | |||||| ||||||||| | |||||||| | ||||||||    
T  140 cagtgagtctgaattaatatgaatattgttgttggataaatttaaatacatctattatgtggaaattgtatgttgtagaaata 222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 168826 - 168772
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||    
T  168826 ttgttggataatttgaaatacatatattatgttaatattgtatgatattgaaata 168772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0452 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0452
Description:

Target: scaffold0452; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 13328 - 13382
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||| |||  |||||||||||||||||||    
T  13328 ttgttgaataatttgagatacatatattatttgatgattgtatgatatagaaata 13382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 120299 - 120245
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||| ||||||||||||||||||||||| ||| |||| |||||||||||||||    
T  120299 ttgttgaataatttgagatacatatattatttgattattttatgatatagaaata 120245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 25905 - 25851
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||||||||| ||||||| | ||||||||    
T  25905 ttgttggataatttgaaatacatatattatgtgaatgttgtatgttgtagaaata 25851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 64 - 138
Target Start/End: Complemental strand, 109532 - 109458
Alignment:
Q  64 gagtctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatataga 138  Q
    ||||||||||||  |||| |  ||||||||| ||||||||||||||||||||||||| | |||||||||| ||||    
T  109532 gagtctgaattaaaatgattaatgttgttggttaatttgagatacatatattatgtggaaattgtatgatgtaga 109458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0083
Description:

Target: scaffold0083; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 645 - 696
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  645 ttgttggataatttgagatacatatattatgtgaa-aaggtatgatatagaaa 696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0083; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 88 - 140
Target Start/End: Original strand, 5949 - 6000
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||||||||||||||||||||||| |  ||||||||||||||    
T  5949 ttgttggataatttgagatacatatattatgtgaa-aaggtatgatatagaaa 6000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104 (Bit Score: 36; Significance: 0.00000000002; HSPs: 4)
Name: scaffold0104
Description:

Target: scaffold0104; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 7580 - 7533
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaata 124  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  7580 tatgaatgttgttgttgaataatttgaggtacgtatattatgtgaata 7533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #2
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 14211 - 14164
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaata 124  Q
    ||||||||||||||||| |||||||||| ||| |||||||||||||||    
T  14211 tatgaatgttgttgttgaataatttgaggtacgtatattatgtgaata 14164  T

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Target: scaffold0104; HSP #3
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 16613 - 16566
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaata 124  Q
    ||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  16613 tatgaatgttgttgttgaataatttgtggtacgtatattatgtgaata 16566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0104; HSP #4
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 124
Target Start/End: Complemental strand, 18633 - 18586
Alignment:
Q  77 tatgaatgttgttgttggataatttgagatacatatattatgtgaata 124  Q
    ||||||||||||||||| |||||||| | ||| |||||||||||||||    
T  18633 tatgaatgttgttgttgaataatttgtggtacgtatattatgtgaata 18586  T

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Target: scaffold0134 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 9920 - 9982
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | | |||||||||||||||    
T  9920 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaatgtatgatatagaaa 9982  T

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Target: scaffold0134; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 9889 - 9929
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  9889 ttgttggataatttgaaatacatatattatgtgaatgttgt 9929  T

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Target: scaffold1276 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1276
Description:

Target: scaffold1276; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 68 - 125
Target Start/End: Complemental strand, 445 - 388
Alignment:
Q  68 ctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatat 125  Q
    |||||||| ||||||| |  |||||||||||||||| |||| ||||||||||||||||    
T  445 ctgaattaatatgaatatctttgttggataatttgaaatacttatattatgtgaatat 388  T

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Target: scaffold0445 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0445
Description:

Target: scaffold0445; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 99 - 140
Target Start/End: Original strand, 2652 - 2693
Alignment:
Q  99 tttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    |||||||||||||||||||||| | |||||||||||||||||    
T  2652 tttgagatacatatattatgtggaaattgtatgatatagaaa 2693  T

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Target: scaffold0181 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 86 - 139
Target Start/End: Original strand, 34097 - 34150
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaa 139  Q
    ||||||||| ||||||||| ||||||||||||||| | | ||||||||||||||    
T  34097 tgttgttggttaatttgagttacatatattatgtggaaaatgtatgatatagaa 34150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold1662
Description:

Target: scaffold1662; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 84 - 124
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  84 ttgttggataatttgaaatacatatattatgtgaatgttgt 124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1662; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 115 - 177
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatat-attatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| ||||||| ||| |||| | | |||||||||||||||    
T  115 tgaatgttgttgttgaataatttgagttacatataattttgtggaaaatgtatgatatagaaa 177  T

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Target: scaffold0737 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 5376 - 5416
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  5376 ttgttggataatttgaaatacatatattatgtgaatgttgt 5416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0737; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 5407 - 5469
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  5407 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaagtatgatatagaaa 5469  T

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Target: scaffold0632 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0632
Description:

Target: scaffold0632; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 554 - 514
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  554 ttgttggataatttgaaatacatatattatgtgaatgttgt 514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0632; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Complemental strand, 523 - 487
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  523 tgaatgttgttgttgaataatttgagttacatatatt 487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0509 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0509
Description:

Target: scaffold0509; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 9424 - 9464
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  9424 ttgttggataatttgaaatacatatattatgtgaatgttgt 9464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Original strand, 8048 - 8088
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  8048 ttgttggataatttgaaatacatatattatgtgaatgttgt 8088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 8079 - 8115
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  8079 tgaatgttgttgttgaataatttgagttacatatatt 8115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0285 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0285
Description:

Target: scaffold0285; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 68 - 140
Target Start/End: Complemental strand, 19076 - 19004
Alignment:
Q  68 ctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    |||||||| ||||||| |||| ||||||||| |||| || | ||||||||||| |||||||||| | ||||||    
T  19076 ctgaattaatatgaatattgtggttggataaattgaaatgcgtatattatgtggatattgtatgttgtagaaa 19004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0064 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 128
Target Start/End: Complemental strand, 58137 - 58097
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgt 128  Q
    |||||||||||||||| ||||||||||||||||||| ||||    
T  58137 ttgttggataatttgaaatacatatattatgtgaatgttgt 58097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 12 - 75
Target Start/End: Original strand, 11458 - 11521
Alignment:
Q  12 ttggtgtttggtgtaggaatgaaagttgtttattattatgttgttgttcagtgagtctgaatta 75  Q
    ||||| ||||| |||| |||||||||||||||| ||  | ||||||||||| ||||||||||||    
T  11458 ttggtctttggggtagaaatgaaagttgtttataatattattgttgttcagagagtctgaatta 11521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1817 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1817
Description:

Target: scaffold1817; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 91 - 153
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||||||||| |||||||| ||||||| | |  ||||||||||||||    
T  91 tgaatgttgttgttgaataatttgagttacatatatttatgtggaaaaggtatgatatagaaa 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 136
Target Start/End: Complemental strand, 11022 - 10972
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatata 136  Q
    ||||||||| ||||||||| ||||||||||||||| | | |||||||||||    
T  11022 tgttgttggttaatttgagttacatatattatgtggaaaatgtatgatata 10972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0375 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0375
Description:

Target: scaffold0375; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 79 - 140
Target Start/End: Original strand, 8997 - 9059
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatata-ttatgtgaatattgtatgatatagaaa 140  Q
    ||||||||||||||| |||| ||||| |||||||| ||||||| | | |||||||||||||||    
T  8997 tgaatgttgttgttgaataaattgagttacatatatttatgtggaaaatgtatgatatagaaa 9059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0273 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0273
Description:

Target: scaffold0273; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 140
Target Start/End: Complemental strand, 6966 - 6912
Alignment:
Q  86 tgttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    ||||||||| |||||| || ||||||||||||||| | | |||||||||||||||    
T  6966 tgttgttggttaatttaagctacatatattatgtggaaaatgtatgatatagaaa 6912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Complemental strand, 39488 - 39434
Alignment:
Q  88 ttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaata 142  Q
    |||||||||||||||| ||||||||||||| ||||| ||| ||| | ||||||||    
T  39488 ttgttggataatttgaaatacatatattatatgaatgttgaatgttgtagaaata 39434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0453 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 140
Target Start/End: Complemental strand, 3380 - 3327
Alignment:
Q  87 gttgttggataatttgagatacatatattatgtgaatattgtatgatatagaaa 140  Q
    |||||||| |||||| || ||||||||||||||| | | |||||||||||||||    
T  3380 gttgttggttaatttaagctacatatattatgtggaaaatgtatgatatagaaa 3327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0112 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0112
Description:

Target: scaffold0112; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 68 - 131
Target Start/End: Complemental strand, 2193 - 2132
Alignment:
Q  68 ctgaattattatgaatgttgttgttggataatttgagatacatatattatgtgaatattgtatg 131  Q
    |||| ||| ||||| | |||| ||||||||  |||| |||||||||||||||||||||||||||    
T  2193 ctgatttaatatgagtattgtcgttggata--ttgaaatacatatattatgtgaatattgtatg 2132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111 (Bit Score: 29; Significance: 0.0000003; HSPs: 2)
Name: scaffold0111
Description:

Target: scaffold0111; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 13228 - 13264
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  13228 tgaatgttgttgttgaataatttgagttacatatatt 13264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0111; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 79 - 115
Target Start/End: Original strand, 19495 - 19531
Alignment:
Q  79 tgaatgttgttgttggataatttgagatacatatatt 115  Q
    ||||||||||||||| |||||||||| ||||||||||    
T  19495 tgaatgttgttgttgaataatttgagttacatatatt 19531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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