View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8501_low_20 (Length: 296)

Name: NF8501_low_20
Description: NF8501
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8501_low_20
NF8501_low_20
[»] chr7 (44 HSPs)
chr7 (4-211)||(24789426-24789634)
chr7 (1-211)||(20343500-20343710)
chr7 (1-198)||(2058395-2058592)
chr7 (1-211)||(18392570-18392780)
chr7 (17-211)||(21646448-21646643)
chr7 (17-211)||(43504526-43504721)
chr7 (1-198)||(20357040-20357238)
chr7 (1-198)||(21640213-21640411)
chr7 (1-212)||(32060678-32060889)
chr7 (1-211)||(6592711-6592921)
chr7 (1-212)||(6594927-6595138)
chr7 (17-211)||(39730933-39731128)
chr7 (19-211)||(18409206-18409399)
chr7 (19-211)||(18414082-18414275)
chr7 (19-212)||(48408397-48408591)
chr7 (17-167)||(1532947-1533098)
chr7 (16-198)||(12406663-12406845)
chr7 (1-215)||(1562377-1562591)
chr7 (26-204)||(21811745-21811924)
chr7 (26-198)||(24023831-24024004)
chr7 (31-198)||(4873541-4873709)
chr7 (47-214)||(25767381-25767543)
chr7 (1-112)||(18389134-18389246)
chr7 (47-211)||(47264102-47264267)
chr7 (8-211)||(2479757-2479960)
chr7 (31-198)||(31109082-31109251)
chr7 (16-198)||(12397311-12397480)
chr7 (137-211)||(1532884-1532958)
chr7 (134-213)||(44847617-44847696)
chr7 (26-198)||(16880475-16880648)
chr7 (26-198)||(16885330-16885503)
chr7 (26-198)||(24265689-24265862)
chr7 (26-105)||(24260926-24261006)
chr7 (105-211)||(21983761-21983867)
chr7 (68-212)||(21989388-21989532)
chr7 (154-211)||(18390506-18390562)
chr7 (136-198)||(24260833-24260895)
chr7 (153-198)||(79955-80000)
chr7 (134-168)||(4509335-4509369)
chr7 (134-168)||(4511177-4511211)
chr7 (134-168)||(6431467-6431501)
chr7 (134-168)||(14070348-14070382)
chr7 (134-168)||(14380376-14380410)
chr7 (152-197)||(49092237-49092282)
[»] chr1 (31 HSPs)
chr1 (1-211)||(20622610-20622821)
chr1 (1-211)||(9036003-9036213)
chr1 (17-211)||(40281958-40282154)
chr1 (19-211)||(21053540-21053733)
chr1 (17-211)||(9986785-9986980)
chr1 (1-212)||(44203217-44203428)
chr1 (19-213)||(51764988-51765183)
chr1 (19-211)||(19360912-19361105)
chr1 (27-211)||(19365768-19365953)
chr1 (86-211)||(24202251-24202376)
chr1 (26-198)||(39445897-39446070)
chr1 (26-203)||(41391001-41391178)
chr1 (26-198)||(44023389-44023562)
chr1 (1-148)||(24793709-24793857)
chr1 (26-198)||(25439411-25439584)
chr1 (26-198)||(1054526-1054699)
chr1 (26-198)||(25444604-25444777)
chr1 (10-211)||(13604095-13604296)
chr1 (1-130)||(24786905-24787035)
chr1 (26-148)||(41398656-41398778)
chr1 (134-204)||(21536119-21536189)
chr1 (17-63)||(24202379-24202425)
chr1 (153-198)||(24793678-24793723)
chr1 (26-105)||(43988054-43988134)
chr1 (68-194)||(26644390-26644517)
chr1 (153-215)||(3282273-3282335)
chr1 (153-203)||(41398764-41398814)
chr1 (153-198)||(13598967-13599012)
chr1 (153-197)||(37070334-37070378)
chr1 (153-194)||(16124197-16124238)
chr1 (133-165)||(1192296-1192328)
[»] chr8 (31 HSPs)
chr8 (1-211)||(3439088-3439297)
chr8 (1-198)||(36979804-36980002)
chr8 (1-198)||(4759546-4759744)
chr8 (1-198)||(30656072-30656270)
chr8 (17-211)||(1261414-1261609)
chr8 (1-198)||(33037299-33037497)
chr8 (16-198)||(18852639-18852822)
chr8 (27-211)||(2627318-2627503)
chr8 (26-198)||(10683751-10683924)
chr8 (19-214)||(26288324-26288520)
chr8 (19-214)||(26301581-26301777)
chr8 (19-214)||(26313575-26313771)
chr8 (16-198)||(18870033-18870216)
chr8 (1-148)||(25689604-25689751)
chr8 (16-198)||(6311741-6311923)
chr8 (1-211)||(42575698-42575909)
chr8 (1-211)||(15290143-15290354)
chr8 (1-211)||(15470512-15470723)
chr8 (18-198)||(7289439-7289620)
chr8 (87-211)||(31042908-31043032)
chr8 (16-198)||(25327676-25327858)
chr8 (26-198)||(39784337-39784510)
chr8 (47-211)||(7412787-7412952)
chr8 (16-148)||(10688661-10688793)
chr8 (26-211)||(35745793-35745979)
chr8 (153-214)||(25689558-25689618)
chr8 (153-198)||(10688630-10688675)
chr8 (153-198)||(5701964-5702009)
chr8 (153-203)||(4456575-4456625)
chr8 (134-168)||(11383406-11383440)
chr8 (153-197)||(23799105-23799149)
[»] chr6 (53 HSPs)
chr6 (1-212)||(16578891-16579102)
chr6 (1-212)||(16616278-16616489)
chr6 (1-211)||(27647467-27647678)
chr6 (1-211)||(16554454-16554664)
chr6 (1-211)||(16631010-16631220)
chr6 (17-213)||(411683-411881)
chr6 (1-213)||(5674227-5674440)
chr6 (17-211)||(3073148-3073343)
chr6 (1-211)||(25420797-25421007)
chr6 (17-213)||(6136353-6136549)
chr6 (19-211)||(2171911-2172104)
chr6 (19-211)||(22709452-22709645)
chr6 (1-203)||(34166673-34166877)
chr6 (44-198)||(30125030-30125185)
chr6 (1-203)||(13150856-13151060)
chr6 (1-211)||(33342477-33342688)
chr6 (16-198)||(11857373-11857555)
chr6 (1-215)||(34164440-34164655)
chr6 (1-211)||(6026834-6027044)
chr6 (85-213)||(6097860-6097988)
chr6 (1-148)||(16652759-16652907)
chr6 (16-198)||(14741938-14742120)
chr6 (16-198)||(22010201-22010383)
chr6 (19-148)||(5266480-5266610)
chr6 (26-198)||(6438898-6439071)
chr6 (86-211)||(26253589-26253714)
chr6 (1-102)||(25421000-25421101)
chr6 (47-211)||(23896792-23896957)
chr6 (17-211)||(16839137-16839331)
chr6 (26-114)||(28155167-28155256)
chr6 (26-211)||(33329932-33330118)
chr6 (131-215)||(34151824-34151907)
chr6 (16-148)||(14737128-14737260)
chr6 (26-211)||(33335429-33335615)
chr6 (26-212)||(6005821-6006008)
chr6 (26-105)||(5343879-5343959)
chr6 (153-211)||(16652716-16652773)
chr6 (47-212)||(5756950-5757116)
chr6 (153-198)||(5266596-5266641)
chr6 (153-198)||(14737097-14737142)
chr6 (136-198)||(5343990-5344052)
chr6 (155-198)||(28155102-28155145)
chr6 (153-198)||(5016981-5017026)
chr6 (153-198)||(31085958-31086003)
chr6 (68-100)||(16554659-16554691)
chr6 (68-100)||(16578864-16578896)
chr6 (68-100)||(16616484-16616516)
chr6 (68-100)||(16631215-16631247)
chr6 (68-100)||(16652902-16652934)
chr6 (153-204)||(5571755-5571806)
chr6 (8-63)||(6097803-6097858)
chr6 (68-102)||(11857331-11857365)
chr6 (158-198)||(21272474-21272514)
[»] chr3 (72 HSPs)
chr3 (4-211)||(54634710-54634917)
chr3 (9-212)||(6716084-6716287)
chr3 (1-198)||(8477792-8477990)
chr3 (21-198)||(40372268-40372446)
chr3 (1-212)||(25637012-25637223)
chr3 (1-211)||(3617034-3617244)
chr3 (1-198)||(7167672-7167870)
chr3 (27-211)||(800685-800870)
chr3 (1-164)||(2671111-2671275)
chr3 (19-211)||(1306411-1306604)
chr3 (1-148)||(45282628-45282776)
chr3 (1-211)||(4598896-4599107)
chr3 (1-211)||(4601117-4601328)
chr3 (1-203)||(10058034-10058238)
chr3 (1-203)||(10060256-10060460)
chr3 (1-203)||(10062478-10062682)
chr3 (1-203)||(10064700-10064904)
chr3 (26-198)||(22172674-22172847)
chr3 (19-211)||(23198337-23198530)
chr3 (19-211)||(23200536-23200729)
chr3 (9-148)||(6718331-6718471)
chr3 (1-203)||(10055812-10056016)
chr3 (1-203)||(10066922-10067126)
chr3 (1-198)||(28503331-28503528)
chr3 (19-213)||(26928078-26928273)
chr3 (16-198)||(28501164-28501346)
chr3 (26-198)||(18656843-18657017)
chr3 (1-194)||(27352097-27352291)
chr3 (1-211)||(10208778-10208989)
chr3 (1-211)||(10210978-10211189)
chr3 (85-211)||(7782586-7782712)
chr3 (47-211)||(33386137-33386302)
chr3 (10-211)||(37408036-37408236)
chr3 (1-148)||(8738585-8738733)
chr3 (1-148)||(9090823-9090971)
chr3 (47-212)||(37726134-37726300)
chr3 (47-211)||(27453416-27453581)
chr3 (26-213)||(2672416-2672604)
chr3 (26-204)||(2676581-2676760)
chr3 (19-148)||(32143754-32143884)
chr3 (153-213)||(45282583-45282642)
chr3 (153-211)||(6718288-6718345)
chr3 (26-198)||(8512642-8512815)
chr3 (25-105)||(32475885-32475966)
chr3 (25-105)||(32480743-32480824)
chr3 (151-211)||(32143868-32143928)
chr3 (26-198)||(8517522-8517695)
chr3 (47-148)||(27986001-27986103)
chr3 (26-198)||(24968519-24968692)
chr3 (151-211)||(27974433-27974493)
chr3 (151-211)||(27985957-27986017)
chr3 (134-198)||(36029640-36029704)
chr3 (153-201)||(40734084-40734132)
chr3 (152-211)||(40845220-40845279)
chr3 (153-198)||(16264896-16264941)
chr3 (153-198)||(21711768-21711813)
chr3 (153-198)||(27027273-27027318)
chr3 (153-198)||(30709271-30709316)
chr3 (159-198)||(8738554-8738593)
chr3 (159-198)||(9090792-9090831)
chr3 (133-212)||(27038588-27038667)
chr3 (136-198)||(32475997-32476059)
chr3 (136-198)||(32480855-32480917)
chr3 (153-211)||(39032017-39032075)
chr3 (55-201)||(40735015-40735161)
chr3 (160-198)||(1730921-1730959)
chr3 (17-63)||(7782538-7782584)
chr3 (68-102)||(22172864-22172898)
chr3 (153-198)||(35926057-35926101)
chr3 (153-198)||(40592257-40592302)
chr3 (153-194)||(48438782-48438823)
chr3 (68-100)||(6716290-6716322)
[»] chr5 (57 HSPs)
chr5 (1-212)||(22536642-22536853)
chr5 (17-211)||(29719965-29720161)
chr5 (1-212)||(24136273-24136485)
chr5 (1-211)||(10592844-10593053)
chr5 (1-213)||(40379676-40379888)
chr5 (1-211)||(16546216-16546426)
chr5 (1-211)||(40381889-40382099)
chr5 (27-211)||(9789624-9789809)
chr5 (17-211)||(26177466-26177661)
chr5 (27-211)||(18442048-18442233)
chr5 (1-211)||(16543994-16544204)
chr5 (33-211)||(29722152-29722332)
chr5 (1-198)||(27450200-27450397)
chr5 (1-211)||(29751534-29751724)
chr5 (26-198)||(30631763-30631936)
chr5 (1-198)||(27445357-27445554)
chr5 (1-198)||(43599108-43599306)
chr5 (1-198)||(43604600-43604798)
chr5 (1-198)||(43610092-43610290)
chr5 (1-203)||(25077713-25077916)
chr5 (1-203)||(25135682-25135885)
chr5 (17-211)||(16407641-16407836)
chr5 (16-198)||(1456650-1456832)
chr5 (87-211)||(29752266-29752390)
chr5 (17-211)||(26170357-26170552)
chr5 (17-211)||(16409077-16409272)
chr5 (33-198)||(29402562-29402728)
chr5 (26-198)||(15045095-15045267)
chr5 (86-211)||(15465000-15465125)
chr5 (26-198)||(28807088-28807261)
chr5 (47-211)||(9352807-9352972)
chr5 (86-211)||(36931843-36931968)
chr5 (1-148)||(43592663-43592811)
chr5 (1-148)||(31180640-31180787)
chr5 (28-204)||(37556131-37556308)
chr5 (28-204)||(37560953-37561130)
chr5 (26-211)||(2785777-2785963)
chr5 (26-211)||(33768586-33768772)
chr5 (26-211)||(33791718-33791904)
chr5 (19-128)||(38219837-38219947)
chr5 (17-82)||(35388104-35388169)
chr5 (26-212)||(31396488-31396675)
chr5 (161-211)||(35388196-35388246)
chr5 (153-198)||(31180773-31180818)
chr5 (153-198)||(43592797-43592842)
chr5 (153-212)||(14520796-14520855)
chr5 (26-211)||(31401346-31401532)
chr5 (68-102)||(43592636-43592670)
chr5 (68-102)||(43599081-43599115)
chr5 (68-102)||(43604573-43604607)
chr5 (68-102)||(43610065-43610099)
chr5 (68-100)||(10593048-10593080)
chr5 (153-203)||(11916452-11916502)
chr5 (68-102)||(27445330-27445364)
chr5 (68-102)||(27450173-27450207)
chr5 (68-102)||(29751507-29751541)
chr5 (153-194)||(12083667-12083708)
[»] chr2 (28 HSPs)
chr2 (1-198)||(9295874-9296072)
chr2 (1-198)||(14291915-14292113)
chr2 (1-198)||(11098399-11098597)
chr2 (19-212)||(25410073-25410267)
chr2 (1-212)||(12647757-12647968)
chr2 (19-212)||(3492184-3492378)
chr2 (19-211)||(30832921-30833114)
chr2 (17-211)||(32289148-32289343)
chr2 (27-211)||(6266274-6266459)
chr2 (17-212)||(4484728-4484924)
chr2 (19-211)||(40739264-40739457)
chr2 (31-198)||(39811489-39811657)
chr2 (87-215)||(32247229-32247356)
chr2 (133-198)||(44310483-44310548)
chr2 (26-211)||(19344824-19345010)
chr2 (26-197)||(19349682-19349854)
chr2 (151-212)||(28258668-28258729)
chr2 (153-198)||(8389636-8389681)
chr2 (8-148)||(28258713-28258853)
chr2 (151-198)||(36757430-36757477)
chr2 (153-215)||(33528093-33528155)
chr2 (153-198)||(10706738-10706783)
chr2 (153-198)||(21630511-21630556)
chr2 (153-198)||(39483443-39483488)
chr2 (157-213)||(33118696-33118752)
chr2 (159-198)||(20522794-20522833)
chr2 (68-101)||(7450869-7450902)
chr2 (153-198)||(23077957-23078002)
[»] scaffold0491 (2 HSPs)
scaffold0491 (8-211)||(9105-9308)
scaffold0491 (8-215)||(11550-11757)
[»] scaffold0188 (1 HSPs)
scaffold0188 (19-212)||(17430-17624)
[»] chr4 (42 HSPs)
chr4 (21-198)||(24742387-24742565)
chr4 (27-211)||(31495717-31495902)
chr4 (19-211)||(13992686-13992879)
chr4 (1-203)||(7122274-7122477)
chr4 (1-211)||(8392982-8393192)
chr4 (27-203)||(7124496-7124673)
chr4 (1-198)||(51520841-51521038)
chr4 (1-211)||(8395191-8395401)
chr4 (19-211)||(28467977-28468170)
chr4 (16-198)||(56141523-56141706)
chr4 (16-198)||(9223911-9224093)
chr4 (16-198)||(9228698-9228880)
chr4 (26-198)||(5733061-5733235)
chr4 (1-212)||(5135648-5135860)
chr4 (1-211)||(5137875-5138086)
chr4 (26-215)||(3814421-3814609)
chr4 (1-148)||(29761048-29761196)
chr4 (26-198)||(18856124-18856297)
chr4 (26-198)||(45347329-45347502)
chr4 (16-170)||(18712295-18712449)
chr4 (86-212)||(31985126-31985252)
chr4 (212-288)||(44882117-44882193)
chr4 (95-198)||(18860406-18860509)
chr4 (86-212)||(5148177-5148303)
chr4 (26-147)||(45356861-45356983)
chr4 (153-214)||(29761182-29761242)
chr4 (227-283)||(44864243-44864299)
chr4 (151-211)||(5143807-5143867)
chr4 (150-198)||(8689049-8689097)
chr4 (231-283)||(44849988-44850040)
chr4 (153-198)||(16628358-16628403)
chr4 (153-198)||(38151923-38151968)
chr4 (154-198)||(3778116-3778160)
chr4 (152-198)||(5268704-5268750)
chr4 (153-198)||(6742901-6742946)
chr4 (153-198)||(10047932-10047977)
chr4 (153-194)||(16622783-16622824)
chr4 (68-100)||(8393187-8393219)
chr4 (68-100)||(8395396-8395428)
chr4 (153-198)||(36314716-36314761)
chr4 (153-198)||(36328925-36328970)
chr4 (153-198)||(54867745-54867790)
[»] scaffold0137 (1 HSPs)
scaffold0137 (1-211)||(5859-6070)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-211)||(2975-3185)
[»] scaffold0286 (1 HSPs)
scaffold0286 (19-211)||(21939-22132)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-211)||(4100-4310)
[»] scaffold0355 (1 HSPs)
scaffold0355 (26-198)||(3349-3522)
[»] scaffold0464 (1 HSPs)
scaffold0464 (26-198)||(760-933)
[»] scaffold0135 (1 HSPs)
scaffold0135 (16-198)||(34566-34748)
[»] scaffold0140 (1 HSPs)
scaffold0140 (86-211)||(7911-8036)
[»] scaffold1519 (1 HSPs)
scaffold1519 (19-170)||(523-675)
[»] scaffold0006 (3 HSPs)
scaffold0006 (10-211)||(132752-132953)
scaffold0006 (153-198)||(6252-6297)
scaffold0006 (153-198)||(3060-3105)
[»] scaffold0510 (1 HSPs)
scaffold0510 (47-211)||(1083-1248)
[»] scaffold1455 (1 HSPs)
scaffold1455 (135-198)||(1721-1784)
[»] scaffold0087 (2 HSPs)
scaffold0087 (47-204)||(43441-43599)
scaffold0087 (151-213)||(36322-36384)
[»] scaffold0665 (2 HSPs)
scaffold0665 (16-148)||(8098-8230)
scaffold0665 (153-198)||(8216-8261)
[»] scaffold0197 (2 HSPs)
scaffold0197 (26-198)||(13796-13969)
scaffold0197 (25-211)||(18663-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (26-198)||(176462-176635)
[»] scaffold0259 (1 HSPs)
scaffold0259 (17-198)||(1751-1932)
[»] scaffold0028 (1 HSPs)
scaffold0028 (17-198)||(148456-148637)
[»] scaffold0098 (1 HSPs)
scaffold0098 (151-212)||(45744-45805)
[»] scaffold0466 (1 HSPs)
scaffold0466 (134-168)||(6750-6784)


Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 24789634 - 24789426
Alignment:
Q  4 gatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattt 102  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||| ||||||||    
T  24789634 gatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccaagatcgtgccacgattt 24789535  T
Q  103 tgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 202  Q
     ||||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  24789534 ggcaccctgcaaactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 24789435  T
Q  203 atctcaaca 211  Q
    |||||||||    
T  24789434 atctcaaca 24789426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 20343710 - 20343500
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  20343710 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacga 20343611  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||| || |||| ||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||    
T  20343610 ttttgcatccggcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgcgtcacgatttccctgttcttccagaccacaaatttgaaga 20343511  T
Q  200 caaatctcaaca 211  Q
    | ||||||||||    
T  20343510 c-aatctcaaca 20343500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 2058395 - 2058592
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  2058395 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 2058494  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  2058495 tttggcgtcctgcaaactagctcacggcacctc-aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 2058592  T

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Target: chr7; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 18392570 - 18392780
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18392570 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18392669  T
Q  100 ttttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||||  ||||||||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  18392670 atttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 18392768  T
Q  199 acaaatctcaaca 211  Q
    || ||||||||||    
T  18392769 ac-aatctcaaca 18392780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 21646448 - 21646643
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||| |||||||||||     
T  21646448 cccaaggtatgaccagttcttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaa 21646547  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | ||||||||||||||||||||||| | ||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  21646548 ccagctcacggcatcacgaaatcgtgtcacgatgccaaatttgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatgtcaaca 21646643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 43504526 - 43504721
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||  ||||||||||||||| |||||||||||     
T  43504526 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaa 43504625  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||    
T  43504626 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagctaaatctcaaca 43504721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 20357238 - 20357040
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| ||||| |||||||||||||||||||||||||||||||||   ||| |||||||||||||||| |||||| |||||    
T  20357238 cacgatttgcgtctgacccaaggtttgaccggtccttatcaaggatacttaacgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacga 20357139  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  20357138 tttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 20357040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 21640213 - 21640411
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||| |||||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||    
T  21640213 cacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacga 21640312  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  21640313 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 21640411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 32060678 - 32060889
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  32060678 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaatcgtgccacga 32060777  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32060778 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 32060875  T
Q  198 gacaaatctcaacaa 212  Q
    ||| |||||||||||    
T  32060876 gac-aatctcaacaa 32060889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 6592711 - 6592921
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  6592711 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga 6592810  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  6592811 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 6592908  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  6592909 gac-aatctcaaca 6592921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 6594927 - 6595138
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  6594927 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga 6595026  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||    
T  6595027 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgtttttccagaccacaaatttgaa 6595124  T
Q  198 gacaaatctcaacaa 212  Q
    ||| |||||||||||    
T  6595125 gac-aatctcaacaa 6595138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 39731128 - 39730933
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||| ||||||||||||||| |||||||||||     
T  39731128 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaa 39731029  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  39731028 ccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 39730933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 18409206 - 18409399
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||| |  |||||||||||||||| ||| ||||||||| ||||| ||||||||||| |     
T  18409206 caaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgtcacgatttctcaagatcgtgtcatgatttggcaccctgcaaacc 18409305  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| | ||||||||||||||||||||| |||||| |||||||| ||||||||||||| ||||||||||||| ||||||||||||    
T  18409306 agctcacggcaccacaaaatcgtgtcacgatgccaaattcgtgttacgatttctctgttcttccagaacacaaatttgaagccaaatctcaaca 18409399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 18414082 - 18414275
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||| |  ||||||| |||||||||||| ||||||||||||||| || |||||||| |     
T  18414082 caaggtacgaccagtccttatcatggaaacttaacaagcaagtttgagaatcgtgttacgatttcccaagatcgtgtcacgatttggcgccctgcaaacc 18414181  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| | |||||||| |||||||||||| ||||||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  18414182 agctcacggcaccacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 18414275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 48408591 - 48408397
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||   || |||||||||||||||||    |||||||||||||||| ||| ||||||||||||||| ||||||||||| |     
T  48408591 caaggtacgaccagtccttatcctagaaacttaacgagcaagtttgcaaatcgtgtcacgatttctcaagatcgtgtcacgatttggcaccctgcaaacc 48408492  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| |||||||||||||    
T  48408491 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 48408397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 17 - 167
Target Start/End: Complemental strand, 1533098 - 1532947
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    |||||||||| ||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||||||||| |||||||||||     
T  1533098 cccaaggtataaccagtccttatcaaggatacttaacgagtaagtttcacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 1532999  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 167  Q
    |||||||| |||||| | ||||| ||||||||||||||| ||||||||||||    
T  1532998 ctagctcatggcacctcaaaatcatgtcacgatgccaaattcgtgtcacgat 1532947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 12406663 - 12406845
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  | |||||    
T  12406663 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcttgcaa 12406761  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  12406762 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 12406845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 215
Target Start/End: Original strand, 1562377 - 1562591
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacga 99  Q
    |||||||||||| |  | ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||    
T  1562377 cacgatttgcgtccgtcacaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaccaaaatcgtgacacga 1562476  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    |||   ||||   || | |    |  | | | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1562477 tttaaaacccaaaaaacaaaaaaaaagaaacacgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 1562576  T
Q  200 caaatctcaacaataa 215  Q
    | ||||||||||||||    
T  1562577 c-aatctcaacaataa 1562591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 21811924 - 21811745
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||| | | |||||    
T  21811924 tgaccagtccttatcagagatacttaactagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacattgctca 21811825  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    ||||| | | | |||||||||||||| |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  21811824 cggcatctc-agatcgtgtcacgatggcaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 21811745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 24024004 - 24023831
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||||| |    
T  24024004 tgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctctc 24023905  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||  |  ||||||||| |||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  24023904 tgccacttgaaatcgtgccacgatgccacaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24023831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 31 - 198
Target Start/End: Original strand, 4873541 - 4873709
Alignment:
Q  31 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcac 129  Q
    |||||||||||  |||||||||||||||||||||   || ||||||||||||||||| |||||| |||||||| ||  ||||||| ||| || |||||      
T  4873541 agtccttatcagtgatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactatcttacggcca 4873640  T
Q  130 cccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  4873641 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4873709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 47 - 214
Target Start/End: Original strand, 25767381 - 25767543
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||    
T  25767381 acttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcac 25767480  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    ||||||||| | |||||||||||||       ||||||||||||||||||||| ||||| |||||||||    
T  25767481 gatgccaaatttgtgtcacgatttc------tttccagaccacaaatttgaagccaaatatcaacaata 25767543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 112
Target Start/End: Original strand, 18389134 - 18389246
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18389134 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 18389233  T
Q  100 ttttgcaccctgc 112  Q
     ||||||||||||    
T  18389234 atttgcaccctgc 18389246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 47264102 - 47264267
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| || ||| ||| ||||||||  |||||| ||| | |||||||| ||   | ||||||||||||    
T  47264102 acttaaccagcaagtttgaaaatcgtgtcacgatttcacacaattgtgccacgatttgacaccctacaaaccagctcacgacattacaaaatcgtgtcac 47264201  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||| || |||||||| ||||||||||||||| ||||| ||||||    
T  47264202 gatgccaaaatcgtgtcacgatttctctattcttccaaaccacaaatttgaagccaaatttcaaca 47264267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 2479757 - 2479960
Alignment:
Q  8 tgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgca 106  Q
    ||||||| |||||||||| |||||  |||||||  | | ||||||| | ||||||| |  ||||||| |||||||| |||| ||||| ||||||||  ||    
T  2479757 tgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtaacgatttcacaaaatcgtgacacgatttgaca 2479855  T
Q  107 ccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatct 206  Q
    |||||||| | |||||||||||     ||||||||||||||||||||||||||||||| ||||| |||||||| || ||||||||||||||| ||||| |    
T  2479856 ccctgcaaaccagctcacggcattagaaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttacaaaccacaaatttgaagccaaattt 2479955  T
Q  207 caaca 211  Q
    |||||    
T  2479956 caaca 2479960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 67; E-Value: 8e-30
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 31109251 - 31109082
Alignment:
Q  31 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctcac-ggc 127  Q
    |||||||||||   ||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || |||| || |||    
T  31109251 agtccttatcagttatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttagcttacaggc 31109152  T
Q  128 accccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||   ||||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  31109151 actt-gaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 31109082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 12397311 - 12397480
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaat 115  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   ||||||||||||||||||||          |||  ||   |||||||     
T  12397311 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaa----------gatcatgg--cctgcaaa 12397397  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||||  |  |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||||||||||    
T  12397398 ctagctcacggccacttgaaatcgtgtcacgataccaaaatcgtgtcgcgatttctctgttcttccagaccacaaatttgaag 12397480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 137 - 211
Target Start/End: Complemental strand, 1532958 - 1532884
Alignment:
Q  137 tcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||| ||||||    
T  1532958 tcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatatcaaca 1532884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 134 - 213
Target Start/End: Complemental strand, 44847696 - 44847617
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||  | ||||||||||||||| ||||| ||||||||    
T  44847696 aaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttttaaaccacaaatttgaagccaaatttcaacaat 44847617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 16880475 - 16880648
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatcta-gctca 123  Q
    ||||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  || |||| ||| |||||    
T  16880475 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16880574  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   |||||||||||||| |||||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16880575 ctgc-ctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16880648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 16885330 - 16885503
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatcta-gctca 123  Q
    ||||||||||||||||  || ||||||| ||||||||||   |||||||||| ||||||||| |||||| |||||||||||  || |||| ||| |||||    
T  16885330 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacaatttcccaagatcgtgacacgattttgcttccagcaaactaggctca 16885429  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   |||||||||||||| |||||||||| ||||||| | ||| ||||||| ||||| |||||||||    
T  16885430 ctgc-ctccctgatcgtgtcacgatggcaaaatcgtgacacgattcctctgctcttccaaaccactaatttgaag 16885503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 24265862 - 24265689
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  24265862 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 24265763  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  24265762 ctgc-ctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 24265689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 24261006 - 24260926
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 105  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  24261006 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 24260926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 105 - 211
Target Start/End: Original strand, 21983761 - 21983867
Alignment:
Q  105 caccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    |||||||||| | |||||||| ||   | ||||||||||||||||   |||||||||||||||||| ||||||||||| ||||||||||||||| ||| |    
T  21983761 caccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaatt 21983860  T
Q  205 ctcaaca 211  Q
     ||||||    
T  21983861 ttcaaca 21983867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 68 - 212
Target Start/End: Original strand, 21989388 - 21989532
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgat 167  Q
    ||||||||||| ||  | |||||||| |||||||   | |||||||| | |||||||| ||   | ||||||||||||||||   ||||| |||||||||    
T  21989388 atcgtgtcacgtttcacaaaatcgtgccacgattggtcgccctgcaaaccagctcacgacattgcaaaatcgtgtcacgatgatgaaatcttgtcacgat 21989487  T
Q  168 ttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  21989488 ttctctgttcttccaaaccacaaatttgaagccaactttcaacaa 21989532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 154 - 211
Target Start/End: Original strand, 18390506 - 18390562
Alignment:
Q  154 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||| ||||||||||||||||||| | ||||||||||||||||| ||||||||||    
T  18390506 aatcgtggcacgatttccctgttcttctaaaccacaaatttgaagac-aatctcaaca 18390562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Complemental strand, 24260895 - 24260833
Alignment:
Q  136 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  24260895 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 24260833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 79955 - 80000
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||    
T  79955 aaatcgtgtcacgatttctctgttcttccaaatcacaaatttgaag 80000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 4509335 - 4509369
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    ||||||||||||||| |||||||||||||||||||    
T  4509335 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4509369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 4511177 - 4511211
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    ||||||||||||||| |||||||||||||||||||    
T  4511177 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 4511211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 6431501 - 6431467
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    ||||||||||||||| |||||||||||||||||||    
T  6431501 aaatcgtgtcacgatcccaaaatcgtgtcacgatt 6431467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 14070348 - 14070382
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    |||||||| ||||||||||||||||||||||||||    
T  14070348 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14070382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Original strand, 14380376 - 14380410
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    |||||||| ||||||||||||||||||||||||||    
T  14380376 aaatcgtgccacgatgccaaaatcgtgtcacgatt 14380410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 152 - 197
Target Start/End: Original strand, 49092237 - 49092282
Alignment:
Q  152 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||||||||||||| ||||| ||||||||||| || |||||||||||    
T  49092237 aaaatcgtgtcacaatttctctgttcttccaaactacaaatttgaa 49092282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 176; Significance: 8e-95; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 20622610 - 20622821
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  20622610 cacgatttgcgtaccacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacaatcgtgtcacgatttcccacaatcgtgtcacga 20622709  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||| ||||||||||  ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  20622710 tttggcaccctgcagactagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 20622809  T
Q  200 caaatctcaaca 211  Q
    ||||||||||||    
T  20622810 caaatctcaaca 20622821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 9e-76
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 9036213 - 9036003
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacga 99  Q
    |||||| ||||||  |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| | ||| |||||    
T  9036213 cacgatctgcgtaacacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttaacaaaatagtgacacga 9036114  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
     |||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9036113 atttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 9036014  T
Q  200 caaatctcaaca 211  Q
    | ||||||||||    
T  9036013 c-aatctcaaca 9036003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 40282154 - 40281958
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||| ||| |||||||||||||||| |||||||||||    
T  40282154 cccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttaccacaatcgtgtcacgatttggcaccctgcaa 40282055  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
     ||||||||||||||| | ||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40282054 cctagctcacggcaccactaaatcgtgtcacgatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaaca 40281958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 21053733 - 21053540
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatc 116  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||| |||| ||    
T  21053733 caaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccttgcattc 21053634  T
Q  117 tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  21053633 tagctcactgcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 21053540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 9986980 - 9986785
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||||||||||||||||| | ||| |||||||||||||||||    ||||||||||||||||||||| |||||||||||||| |||| |||||      
T  9986980 cccaaggtatgaccagtccttattatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcacactgcaga 9986881  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||||| ||||||||||| |||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9986880 ccagctcacggcaccacgaaatcgtgttacgatgtcaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9986785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 44203428 - 44203217
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  44203428 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga 44203329  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||||| | || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  44203328 ttt-gcacccctgcaaccctagctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 44203231  T
Q  198 gacaaatctcaacaa 212  Q
    ||| |||||||||||    
T  44203230 gac-aatctcaacaa 44203217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 51765183 - 51764988
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||||||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||| ||||||||||||||| ||||||||||| |     
T  51765183 caaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaacc 51765084  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    ||||||||||| | |||||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  51765083 agctcacggcatcacgaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttaaagccaaatctcaacaat 51764988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 19361105 - 19360912
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  ||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  19361105 caaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 19361006  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19361005 agctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 19360912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 106; E-Value: 5e-53
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 19365953 - 19365768
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    |||| |||||||||  ||| | ||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| | ||||||||    
T  19365953 gacctgtccttatcctggaaaattaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaaccagctcacg 19365854  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  19365853 gcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagtcaaatctcaaca 19365768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 24202376 - 24202251
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  24202376 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagac 24202277  T
Q  186 cacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| ||||||||||||    
T  24202276 cacaaatttgaagccaaatctcaaca 24202251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 39445897 - 39446070
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||||||||||||||  |||||||||| |||||||||| |||||| |||||||| ||  ||||||| || | ||||    
T  39445897 tgaccagtccttatcagtgatacttaacgagcaagtttctggatcgtgtcatgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 39445996  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| | | ||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39445997 cggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39446070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 203
Target Start/End: Original strand, 41391001 - 41391178
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  ||||||||| |||||||||||   ||| |||||||||||||||| |||||| |||||||| ||  ||||||| || ||||||    
T  41391001 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcatgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41391100  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 203  Q
    |||| | | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  41391101 ggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaa 41391178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 44023562 - 44023389
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||    
T  44023562 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 44023463  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44023462 cggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44023389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 24793857 - 24793709
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  24793857 cacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 24793758  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  24793757 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 24793709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 25439584 - 25439411
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||||||| || | ||||    
T  25439584 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctgcaaacttggctca 25439485  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| | | |||||||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||||    
T  25439484 cggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25439411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 1054699 - 1054526
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || | ||||    
T  1054699 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttggctca 1054600  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||| ||||||| ||||||||||| ||||||||| |||||||||||||||||||||||||||    
T  1054599 cggcacctccaa-tcgtatcacgattccaaaatcgtgacacgatttctctgttcttccagaccacaaatttgaag 1054526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 25444777 - 25444604
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| | ||||||||  ||||||||||||||||||||| |||||| |||||||||||| ||| ||| || | ||||    
T  25444777 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcatcctacaaacttggctca 25444678  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| | | |||||||||||||||  | |||||||||||||||| | |||||||||||||||||||||||||||    
T  25444677 cggcatctc-aaatcgtgtcacgattaccaaatcgtgtcacgattgctctgttcttccagaccacaaatttgaag 25444604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 13604296 - 13604095
Alignment:
Q  10 cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcacc 108  Q
    ||||| |||||||||| |||||  |||||||  | | ||||||| ||||||||| |  ||| |||||||||| | |||| ||||||||||||||  |||     
T  13604296 cgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacaca 13604198  T
Q  109 ctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctca 208  Q
    |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  13604197 ctgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctca 13604098  T
Q  209 aca 211  Q
    |||    
T  13604097 aca 13604095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 130
Target Start/End: Complemental strand, 24787035 - 24786905
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  24787035 cacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 24786936  T
Q  100 ttttgcaccctgcaatctagctcacggcacc 130  Q
    ||| ||  ||||||| |||||||||||||||    
T  24786935 tttggcgtcctgcaaactagctcacggcacc 24786905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 26 - 148
Target Start/End: Original strand, 41398656 - 41398778
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||| ||||||||| |||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||||||    
T  41398656 tgaccagtccttatcaatgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 41398755  T
Q  125 ggcaccccgaaatcgtgtcacgat 148  Q
    |||| | | |||||||||||||||    
T  41398756 ggcatctc-aaatcgtgtcacgat 41398778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 134 - 204
Target Start/End: Complemental strand, 21536189 - 21536119
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    ||||||||||||| ||   |||||||||||||||||| ||||||||||| ||||||||||||||| |||||    
T  21536189 aaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaat 21536119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Complemental strand, 24202425 - 24202379
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt 63  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  24202425 cccaagatatgaccagtccttatcaaggatacttaacgagcaagttt 24202379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 24793723 - 24793678
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  24793723 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24793678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 26 - 105
Target Start/End: Complemental strand, 43988134 - 43988054
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 105  Q
    ||||||||||||||||  |||||||||| ||||||||||   ||||||||||||||| |||| |||||| |||||||||||    
T  43988134 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttaccaagatcgtggcacgattttgc 43988054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 194
Target Start/End: Complemental strand, 26644517 - 26644390
Alignment:
Q  68 atcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacga 166  Q
    ||||||||||| |||| |||| ||||| ||||||||  |||| ||||| | |||||| | ||   | ||||||||| |||||| ||||||||| ||||||    
T  26644517 atcgtgtcacgttttcacaaaatcgtgccacgatttgacaccgtgcaaaccagctcatgacattacaaaatcgtgttacgatgacaaaatcgtatcacga 26644418  T
Q  167 tttccctgttcttccagaccacaaattt 194  Q
    || | ||||||||||| |||||||||||    
T  26644417 ttcctctgttcttccaaaccacaaattt 26644390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 215
Target Start/End: Original strand, 3282273 - 3282335
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 215  Q
    |||||||||||||||||  ||||||||||  ||||||||||||||| ||||| ||||||||||    
T  3282273 aaatcgtgtcacgatttttctgttcttcctaaccacaaatttgaagccaaatttcaacaataa 3282335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 41398764 - 41398814
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 203  Q
    |||||||||||||||||| |||||||| |||||||||||||||||| ||||    
T  41398764 aaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaa 41398814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 13598967 - 13599012
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  13598967 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 13599012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 37070334 - 37070378
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||    
T  37070334 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaa 37070378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 16124238 - 16124197
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 194  Q
    ||||||| |||||||||| ||||||||||| |||||||||||    
T  16124238 aaatcgtatcacgatttctctgttcttccaaaccacaaattt 16124197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 133 - 165
Target Start/End: Complemental strand, 1192328 - 1192296
Alignment:
Q  133 gaaatcgtgtcacgatgccaaaatcgtgtcacg 165  Q
    ||||||||||||||||||||||||||| |||||    
T  1192328 gaaatcgtgtcacgatgccaaaatcgtatcacg 1192296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 167; Significance: 2e-89; HSPs: 31)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 3439297 - 3439088
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||| ||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  3439297 cacgatatgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgat 3439198  T
Q  101 tttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 200  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| |||||||||||||||||    
T  3439197 tttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagac 3439098  T
Q  201 aaatctcaaca 211  Q
     ||||||||||    
T  3439097 -aatctcaaca 3439088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 36979804 - 36980002
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||    
T  36979804 cacgatttgcgtacaacccaaggtatgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacga 36979903  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  36979904 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 36980002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 4759744 - 4759546
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  4759744 cacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacga 4759645  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||    
T  4759644 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 4759546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 30656072 - 30656270
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| |||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  30656072 cacgatttgcgtctgacccaaggtttgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 30656171  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30656172 tttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30656270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 1261609 - 1261414
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| |||||||||||     
T  1261609 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaa 1261510  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| | ||||||||||||||||||||||| ||||||| |||||||  |||||||||| ||||||||||||||  ||||| ||||||    
T  1261509 ctagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcgcgatttctgtgttcttccaaaccacaaatttgaaaccaaatatcaaca 1261414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 33037497 - 33037299
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||| |||||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||| ||||||||||||    
T  33037497 cacgatttgcgtccgttccaaggcatgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacga 33037398  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  33037397 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 33037299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 18852822 - 18852639
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||||||||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  18852822 acccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 18852723  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||||||||  ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  18852722 actagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtatcacgatttctctgttcttccagaccacaaatttgaag 18852639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 2627503 - 2627318
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||||||||| |||||||||||||| ||||| ||||| | ||||||||    
T  2627503 gaccaatccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccatgcaaaccagctcacg 2627404  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | | | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  2627403 gaatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 2627318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 10683924 - 10683751
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||||    
T  10683924 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcac 10683825  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  10683824 ggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10683751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 26288324 - 26288520
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||| || |||||||||||| ||||||||||| |     
T  26288324 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc 26288423  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26288424 agctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26288520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 26301581 - 26301777
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||| || |||||||||||| ||||||||||| |     
T  26301581 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc 26301680  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26301681 agctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26301777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 19 - 214
Target Start/End: Original strand, 26313575 - 26313771
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| |  || ||||||||||||||||| || |||||||||||| ||||||||||| |     
T  26313575 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaattgtgtcacgatttcccaagattgtgtcacgatttggcaccctgcaaacc 26313674  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    ||||||||||| | | ||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||||||    
T  26313675 agctcacggcatcacaaaatcatgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtcaagtctcaacaata 26313771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 18870216 - 18870033
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||||||||||||||||| |  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  18870216 acccaaggtatgaccagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 18870117  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||| || |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18870116 actagctcacgacatcttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18870033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 25689751 - 25689604
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    ||||||||| |||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||    
T  25689751 cacgatttgtgtacaaaccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtgacgatttcccacaatcgtgccacga 25689652  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||    
T  25689651 ttttgcaccctgcaacctagctcacggca-cccgaaatcgtgtcacgat 25689604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 6311741 - 6311923
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| ||||||||| |  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  6311741 acccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 6311839  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||||||||  ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||    
T  6311840 actagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttcttccagaccacaaatttgaag 6311923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 42575698 - 42575909
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| ||||    
T  42575698 cacgatttgcgtccgtcccaaggaaagaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacg 42575797  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  42575798 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 42575895  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  42575896 agac-aatctcaaca 42575909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 15290354 - 15290143
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| |  |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  15290354 cacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 15290255  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  15290254 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 15290157  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  15290156 agac-aatctcaaca 15290143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 15470723 - 15470512
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| |  |||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  15470723 cacgatttgcgtccgtcccaaggaactaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 15470624  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||||||| | || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  15470623 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgtgtcgcaatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 15470526  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  15470525 agac-aatctcaaca 15470512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 7289620 - 7289439
Alignment:
Q  18 ccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc 116  Q
    |||||||| ||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||| |||| ||||||||||||||| ||  ||||||| |    
T  7289620 ccaaggta-gacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgtcacgatttggcgtcctgcaaac 7289522  T
Q  117 tagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| ||| |||  |||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  7289521 tagctcatggctcccttgaaatcgtgtcacgatgccaaaatcgtgtcactatttctctgttcttccagaccacaaatttgaag 7289439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 87 - 211
Target Start/End: Complemental strand, 31043032 - 31042908
Alignment:
Q  87 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacc 186  Q
    |||||||||||||||| ||||||||||| | ||||||||||||| ||||||||||||||||||||||| ||||||||||||||| || ||||||||||||    
T  31043032 aatcgtgtcacgatttggcaccctgcaaaccagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctattcttccagacc 31042933  T
Q  187 acaaatttgaagacaaatctcaaca 211  Q
    |||||||||||| ||||||||||||    
T  31042932 acaaatttgaagtcaaatctcaaca 31042908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 25327858 - 25327676
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| || ||||| ||  |||||||    
T  25327858 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgatttggcgtcctgcaa 25327760  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||| ||  |  ||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  25327759 actagctcacagccacttgaaatcgtgccacgaagccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 25327676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 39784510 - 39784337
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| | ||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||    
T  39784510 tgaccagtccttatcagtgatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 39784411  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39784410 cggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39784337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 7412787 - 7412952
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| |||| | ||  ||||||||  |||||||||| | |||||||||||   |  |||||||||||    
T  7412787 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtaccacgatttgacaccctgcaaaccagctcacggcattacagaatcgtgtcac 7412886  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  7412887 gatgccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagtcaaatttcaaca 7412952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 10688793 - 10688661
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| ||||||||| |  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  10688793 acccaaggt-tgacaagtccttattagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 10688695  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgat 148  Q
     |||||||||||||||  ||||||||||||||||    
T  10688694 actagctcacggcaccttgaaatcgtgtcacgat 10688661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 35745793 - 35745979
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  ||  ||| | | |||||    
T  35745793 tgaccagtccttatcatagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccaacaaacttggctca 35745892  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  35745893 cggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 35745979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 153 - 214
Target Start/End: Complemental strand, 25689618 - 25689558
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  25689618 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaagac-aatctcaacaata 25689558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 10688675 - 10688630
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  10688675 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 10688630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 5702009 - 5701964
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  5702009 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 5701964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 203
Target Start/End: Original strand, 4456575 - 4456625
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 203  Q
    ||||||||||||||||||  |||||||||| ||||||||||||||| ||||    
T  4456575 aaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaa 4456625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 11383440 - 11383406
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    |||||||| ||||||||||||||||||||||||||    
T  11383440 aaatcgtgccacgatgccaaaatcgtgtcacgatt 11383406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 153 - 197
Target Start/End: Complemental strand, 23799149 - 23799105
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||||||||| |||||||| |||||||| || ||||||||||||||    
T  23799149 aaatcgtgttacgatttctctgttctttcaaaccacaaatttgaa 23799105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 53)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 16578891 - 16579102
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16578891 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacga 16578990  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16578991 ttttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 16579090  T
Q  200 caaatctcaacaa 212  Q
    | |||||||||||    
T  16579091 c-aatctcaacaa 16579102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 16616489 - 16616278
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  16616489 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacga 16616390  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16616389 ttttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 16616290  T
Q  200 caaatctcaacaa 212  Q
    | |||||||||||    
T  16616289 c-aatctcaacaa 16616278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 27647678 - 27647467
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | ||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |||||    
T  27647678 cacgatctgcgtaccacccaagaaacgaccagtcaatatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttctcacaatcgtgccacga 27647579  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  27647578 ttttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 27647479  T
Q  200 caaatctcaaca 211  Q
    |||| |||||||    
T  27647478 caaaactcaaca 27647467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16554664 - 16554454
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |    
T  16554664 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaa 16554565  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16554564 ttttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaaga 16554465  T
Q  200 caaatctcaaca 211  Q
    | ||||||||||    
T  16554464 c-aatctcaaca 16554454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16631220 - 16631010
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||| |    
T  16631220 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacaa 16631121  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    |||||||||||| || ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||    
T  16631120 ttttgcaccctgtaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcatgtcacgatttccctgttcttccagaccacaaatttgaaga 16631021  T
Q  200 caaatctcaaca 211  Q
    | ||||||||||    
T  16631020 c-aatctcaaca 16631010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 17 - 213
Target Start/End: Complemental strand, 411881 - 411683
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||     
T  411881 cccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcag 411782  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
     ||||||||||||||| |||||| ||||||| |||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  411781 actagctcacggcaccacgaaattgtgtcacaatgccaaattcgtgtcacgatttccctattcttccagaccacaaatttgaagacaaatctcaacaat 411683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 5674440 - 5674227
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||||  ||||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||| || |||||||||    
T  5674440 cacgatttgcgtacgtcccaaggtatgaccagtccttatcacggatacttaacgagcaagtttcaaaatcgtgtcacgatttcccaagattgtgtcacga 5674341  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||| ||||||||||| | ||||||||||| | | ||||| ||||||||||||||| || |||||||||||| |||||||||||||||||||||||||||     
T  5674340 tttggcaccctgcaaaccagctcacggcatcacaaaatcatgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagc 5674241  T
Q  200 caaatctcaacaat 213  Q
    ||| | ||||||||    
T  5674240 caactatcaacaat 5674227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 124; E-Value: 8e-64
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 3073148 - 3073343
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||||||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||| | |||||||||||||||| |||||||| |      
T  3073148 cccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttccaacaatcgtgtcacgatttggcaccctgtaga 3073247  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  3073248 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgattttcctgttcttccagaccacaaatttgaagacaaatctcaaca 3073343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25421007 - 25420797
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||    
T  25421007 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacga 25420908  T
Q  100 ttttgca-ccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
     |||||| ||||||||  |||||||||||||  |||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||||||||||    
T  25420907 -tttgcacccctgcaaccctagctcacggca-tccgaaatcgtgtcacggtcccaaaattgtgtcacgatttccctgttcttccagaccacaaatttgaa 25420810  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  25420809 gac-aatctcaaca 25420797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 213
Target Start/End: Original strand, 6136353 - 6136549
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||||||   ||||||||     
T  6136353 cccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattttcacccctgcaac 6136452  T
Q  116 c-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    | |||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  6136453 cctagctcacggcatcc-gaaatcgtgtctcgattccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttgaagac-aatctcaacaat 6136549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 2171911 - 2172104
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  ||| ||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  2171911 caaggtacgacctgtccttatcttggaaacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 2172010  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||| | ||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  2172011 agctcacggcatcacgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 2172104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 22709452 - 22709645
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  22709452 caaggtacgaccagtccttatcatggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 22709551  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||| |||| | | ||||||||||||| ||||||| |||||||| |||||| ||||||||||||||||||||||||||| ||||||||||||    
T  22709552 agctcatggcatcacaaaatcgtgtcacgttgccaaattcgtgtcatgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 22709645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 34166877 - 34166673
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    ||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  34166877 cacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 34166778  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  34166777 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 34166680  T
Q  197 agacaaa 203  Q
    |||||||    
T  34166679 agacaaa 34166673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 44 - 198
Target Start/End: Complemental strand, 30125185 - 30125030
Alignment:
Q  44 gatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgt 142  Q
    |||||||||||||||||||||   ||||||||||||||||||||| ||||| |||||||| ||  ||||||| ||||||||||||||| |||||||||||    
T  30125185 gatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgccacgatttggcgtcctgcaaactagctcacggcacctcgaaatcgtgt 30125086  T
Q  143 cacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30125085 cacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30125030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 13151060 - 13150856
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  13151060 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 13150961  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  13150960 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttga 13150863  T
Q  197 agacaaa 203  Q
    |||||||    
T  13150862 agacaaa 13150856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 33342477 - 33342688
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||  |||||||| ||||    
T  33342477 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacg 33342576  T
Q  99 attttgca-ccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    | |||||| ||||||||  |||||||||||||  ||||||||| ||| |||| |||||||||||||||||||||| |||||||||| |||||||||||||    
T  33342577 a-tttgcacccctgcaaccctagctcacggca-tccgaaatcgcgtcgcgatcccaaaatcgtgtcacgatttccatgttcttccaaaccacaaatttga 33342674  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  33342675 agac-aatctcaaca 33342688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 198
Target Start/End: Original strand, 11857373 - 11857555
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  | |||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  11857373 acccaaggt-tgacaagtccttatcagtgttacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 11857471  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11857472 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11857555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 1 - 215
Target Start/End: Complemental strand, 34164655 - 34164440
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt--cccaaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||  || |||||||| ||||    
T  34164655 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacg 34164556  T
Q  99 attttgca-ccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    | |||||| ||||||||  ||| |||||||||  ||||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||    
T  34164555 a-tttgcacccctgcaaccctaactcacggca-tccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttga 34164458  T
Q  197 agacaaatctcaacaataa 215  Q
    ||||||| |||||||||||    
T  34164457 agacaaa-ctcaacaataa 34164440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 6027044 - 6026834
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | |||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  6027044 cacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga 6026945  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||| || |||| |||||||||||||| |||||  |||||||||||||||||||| |||||||| ||||||||||||||    
T  6026944 ttt-gcacccctgcaaccctagctctcg-cacctcgaaatcgtgtcacaatgccgcaatcgtgtcacgatttccctattcttccaaaccacaaatttgaa 6026847  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  6026846 gac-aatctcaaca 6026834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 85 - 213
Target Start/End: Original strand, 6097860 - 6097988
Alignment:
Q  85 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccaga 184  Q
    |||||||||||||||||| ||||||||||| | ||||||||||| | ||||||||||||||||||||||| |||||||| |||||||||||||||||| |    
T  6097860 caaatcgtgtcacgatttagcaccctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcaggatttccctgttcttccaaa 6097959  T
Q  185 ccacaaatttgaagacaaatctcaacaat 213  Q
    |||||||||||||||||||||||||||||    
T  6097960 ccacaaatttgaagacaaatctcaacaat 6097988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 16652907 - 16652759
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||  |||||    
T  16652907 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgattgtgtcacgattttcccaaatcgttccacga 16652808  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
     |||||||||| ||| |||||||||||||||||||||||||||||||||    
T  16652807 ctttgcaccctacaacctagctcacggcaccccgaaatcgtgtcacgat 16652759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 14742120 - 14741938
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  |||||||    
T  14742120 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 14742022  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||| |  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14742021 actagctcacgaccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14741938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 22010383 - 22010201
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  22010383 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 22010285  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||| || |||||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22010284 actaacttacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22010201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 5266480 - 5266610
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    |||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||    
T  5266480 caaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaact 5266579  T
Q  118 agctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||||||||||||| |||||||||||||||||    
T  5266580 agctcacggcacctcgaaatcgtgtcacgat 5266610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 6438898 - 6439071
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| ||||||| |||| || |||| || | ||||    
T  6438898 tgaccagtccttatcagtgatacttaactagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattatgcatccagcaaacttggctca 6438997  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||    
T  6438998 cggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctatgttcttccagaccataaatttgaag 6439071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 26253714 - 26253589
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||| | ||| ||||||| | | | ||||| ||||||||||||||| ||||||||||||||| |||||||| |||||    
T  26253714 aaatcgtgtcacgatttggcaccctgctaactatctcacggtatcacaaaatcttgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 26253615  T
Q  186 cacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||||    
T  26253614 cacaaatttgaagacaaatctcaaca 26253589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 25421101 - 25421000
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||| |||||||||    
T  25421101 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaatcatgtcacgat 25421002  T
Q  101 tt 102  Q
    ||    
T  25421001 tt 25421000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 23896792 - 23896957
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||    
T  23896792 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 23896891  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  23896892 gatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 23896957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 17 - 211
Target Start/End: Original strand, 16839137 - 16839331
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    |||||||| ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || ||||     
T  16839137 cccaaggt-tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaa 16839235  T
Q  116 c-tagctcacggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | | |||||||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  16839236 cttggctcacggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 16839331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 114
Target Start/End: Complemental strand, 28155256 - 28155167
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  28155256 tgaccagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaa 28155167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 33330118 - 33329932
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  33330118 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33330019  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33330018 cggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33329932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 131 - 215
Target Start/End: Complemental strand, 34151907 - 34151824
Alignment:
Q  131 ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 215  Q
    ||||||||| |||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||||| |||||||||||    
T  34151907 ccgaaatcgcgtcacgatcccagaatcgtgtcacgatttccctgttcttccaagccacaaatttgaagacaaa-ctcaacaataa 34151824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Complemental strand, 14737260 - 14737128
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  |||||||    
T  14737260 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 14737162  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgat 148  Q
     ||||||||||||  |  ||||||||||||||||    
T  14737161 actagctcacggccacttgaaatcgtgtcacgat 14737128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 33335615 - 33335429
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  33335615 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33335516  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| |  |||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33335515 cggcatctccg--atcgtgtcacgattgccaaatcgcgaaacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33335429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 212
Target Start/End: Original strand, 6005821 - 6006008
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  6005821 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 6005920  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
     |||| | |||  |||||||||||||  | |||||| | ||||||| | ||||| ||||| ||||||||||||||| ||| | |||||||    
T  6005921 tggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgtttttccaaaccacaaatttgaagccaattttcaacaa 6006008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 26 - 105
Target Start/End: Original strand, 5343879 - 5343959
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 105  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  5343879 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 5343959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 16652773 - 16652716
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||    
T  16652773 aaatcgtgtcacgatttccctgttctttcagaccacaaatttgaagac-aatctcaaca 16652716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 47 - 212
Target Start/End: Complemental strand, 5757116 - 5756950
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | |||||| ||   | |||| |||||||    
T  5757116 acttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgacattacaaaattgtgtcac 5757017  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||||||| ||||||||||| ||||| || |||||  | |||| |||||| ||| ||||| |||||||    
T  5757016 gatgccacaatcgtgtcacaatttctctattcttttaaaccataaatttaaagccaaatttcaacaa 5756950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 5266596 - 5266641
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  5266596 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 5266641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 14737142 - 14737097
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  14737142 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14737097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 5343990 - 5344052
Alignment:
Q  136 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| | |||||||| ||||||||| ||||||| ||| |||||||||||||||    
T  5343990 atcgtgtcacgatgaccaaatcgtgacacgatttctctgttctcccaaaccacaaatttgaag 5344052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 155 - 198
Target Start/End: Complemental strand, 28155145 - 28155102
Alignment:
Q  155 atcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| | |||||||||||||||||||||||||||    
T  28155145 atcgtgtcacgattgctctgttcttccagaccacaaatttgaag 28155102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 5017026 - 5016981
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  5017026 aaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 5016981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 31086003 - 31085958
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||| | |||||||||||||||    
T  31086003 aaatcgtgtcacgatttctctgttcttctaaaccacaaatttgaag 31085958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 16554691 - 16554659
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  16554691 atcgtgtcacgatttcccaaatcgtgtcacgat 16554659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Original strand, 16578864 - 16578896
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  16578864 atcgtgtcacgatttcccaaatcgtgtcacgat 16578896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 16616516 - 16616484
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  16616516 atcgtgtcacgatttcccaaatcgtgtcacgat 16616484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 16631247 - 16631215
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  16631247 atcgtgtcacgatttcccaaatcgtgtcacgat 16631215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 16652934 - 16652902
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  16652934 atcgtgtcacgatttcccaaatcgtgtcacgat 16652902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 153 - 204
Target Start/End: Complemental strand, 5571806 - 5571755
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    |||||||||||||||||| || |||| ||| | |||||||||||||||||||    
T  5571806 aaatcgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaat 5571755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 8 - 63
Target Start/End: Original strand, 6097803 - 6097858
Alignment:
Q  8 tgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt 63  Q
    |||||||  ||| ||||| ||||||||||||||| ||| |||||||||||||||||    
T  6097803 tgcgtacgtccccaggtacgaccagtccttatcatggaaacttaacgagcaagttt 6097858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #52
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 11857331 - 11857365
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  11857331 atcgtgccacgatttcccaaatcgtgtcacgattt 11857365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 21272514 - 21272474
Alignment:
Q  158 gtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||||| |||| | |||||||||||||    
T  21272514 gtgtcacgatttccctgttcctccaaaacacaaatttgaag 21272474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 161; Significance: 7e-86; HSPs: 72)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 4 - 211
Target Start/End: Complemental strand, 54634917 - 54634710
Alignment:
Q  4 gatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattt 102  Q
    ||||||||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||    
T  54634917 gatttgcgtaccacccaagaaaagaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacgattt 54634818  T
Q  103 tgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaa 202  Q
    ||||||||||||  ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  54634817 tgcaccctgcaacttagctcacggcaccccgaaatcgtgtcacaatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-a 54634719  T
Q  203 atctcaaca 211  Q
    |||||||||    
T  54634718 atctcaaca 54634710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 9 - 212
Target Start/End: Complemental strand, 6716287 - 6716084
Alignment:
Q  9 gcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcac 107  Q
    |||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  6716287 gcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcac 6716188  T
Q  108 cctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctc 207  Q
    ||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||    
T  6716187 cctgcaacctagctcacggcaccccgaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttcaagac-aatctc 6716089  T
Q  208 aacaa 212  Q
    |||||    
T  6716088 aacaa 6716084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 8477792 - 8477990
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||| |||||| |||||    
T  8477792 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctcaatcgtgtcacgatttcccaagatcgtgccacga 8477891  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||| || |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  8477892 tttggcatccagcaaactagctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacaatttctctgttcttccagaccacaaatttgaag 8477990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 198
Target Start/End: Complemental strand, 40372446 - 40372268
Alignment:
Q  21 aggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||    
T  40372446 aggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag 40372347  T
Q  120 ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  40372346 ctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 40372268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 25637223 - 25637012
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  25637223 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgccacga 25637124  T
Q  100 ttttgca-ccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
     |||||| ||||||||  ||||||| | ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  25637123 -tttgcacccctgcaaccctagctctc-gcacctcgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttaaa 25637026  T
Q  198 gacaaatctcaacaa 212  Q
    ||| |||||||||||    
T  25637025 gac-aatctcaacaa 25637012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 3617244 - 3617034
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | |||||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  3617244 cacgatttgcgtccgtcccaaggaacgaccagccgttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgacacga 3617145  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3617144 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 3617047  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  3617046 gac-aatctcaaca 3617034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 7167672 - 7167870
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||||||||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  7167672 cacgatttgcgtctgacccaaggtatgaccagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 7167771  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||||||  ||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||    
T  7167772 tttggcgtcctgcaaactagctcacggcaccttgaaattgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaacacaaatttgaag 7167870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 800870 - 800685
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||| ||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||| |||||| |||| | ||||||||    
T  800870 gaccattccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccccgcaaaccagctcacg 800771  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  800770 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaattcgaagacaaatctcaaca 800685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 117; E-Value: 1e-59
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 2671275 - 2671111
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  2671275 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacga 2671176  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcac 164  Q
    ||| ||| ||||||| |||||||||||||||  |||||| |||||||||||||||||||||||||    
T  2671175 tttggcatcctgcaaactagctcacggcaccttgaaatcatgtcacgatgccaaaatcgtgtcac 2671111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 1306411 - 1306604
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  ||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  1306411 caaggtacgacctgtccttatcctggaaacttaacgagcaagtttgagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 1306510  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||| |||| ||||||||||||||||||||||| || |||||||||||| |||||||||||||||| |||||||||| ||||||||||||    
T  1306511 agctcacgacaccacgaaatcgtgtcacgatgccaaattcatgtcacgatttctctgttcttccagaccataaatttgaagccaaatctcaaca 1306604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 45282776 - 45282628
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  45282776 cacgatctgcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 45282677  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
     |||||||||||||| |||||||||||||||||||||||||||||||||    
T  45282676 atttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgat 45282628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 4598896 - 4599107
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca--aatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||||    
T  4598896 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacg 4598995  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | |||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4598996 attt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 4599093  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  4599094 agac-aatctcaaca 4599107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 4601117 - 4601328
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca--aatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||  ||||||| ||||    
T  4601117 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgatttcccagaaatcgtgccacg 4601216  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | |||||||||||| || ||||||||||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  4601217 attt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcgcgatcccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 4601314  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  4601315 agac-aatctcaaca 4601328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10058238 - 10058034
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    ||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10058238 cacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10058139  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10058138 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10058041  T
Q  197 agacaaa 203  Q
    |||||||    
T  10058040 agacaaa 10058034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10060460 - 10060256
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    ||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10060460 cacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10060361  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10060360 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10060263  T
Q  197 agacaaa 203  Q
    |||||||    
T  10060262 agacaaa 10060256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10062682 - 10062478
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    ||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10062682 cacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10062583  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10062582 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10062485  T
Q  197 agacaaa 203  Q
    |||||||    
T  10062484 agacaaa 10062478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10064904 - 10064700
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    ||||||||||||||  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10064904 cacgatttgcgtacgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10064805  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10064804 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10064707  T
Q  197 agacaaa 203  Q
    |||||||    
T  10064706 agacaaa 10064700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 22172847 - 22172674
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  ||| |||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||||||    
T  22172847 tgaccagtccttatcagagatccttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 22172748  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  22172747 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 22172674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 23198337 - 23198530
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||  ||| |||||||||||||||||    |||||||||||||| | ||||||||||||||||||| ||||||||||| |     
T  23198337 caaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaacc 23198436  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||| | | |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  23198437 agctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 23200536 - 23200729
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttc-ccaaatcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||  ||| |||||||||||||||||    |||||||||||||| | ||||||||||||||||||| ||||||||||| |     
T  23200536 caaggtacgaccagtccttatcctggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctccaaatcgtgtcacgatttggcaccctgcaaacc 23200635  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||| ||| | | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  23200636 agctcacagcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 23200729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 9 - 148
Target Start/End: Complemental strand, 6718471 - 6718331
Alignment:
Q  9 gcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcac 107  Q
    |||||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||    
T  6718471 gcgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaatcgtgacacgattttgcac 6718372  T
Q  108 cctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  6718371 cctgcaacctagctcacggcaccccgaaatcgtgtcacgat 6718331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10056016 - 10055812
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10056016 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10055917  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10055916 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10055819  T
Q  197 agacaaa 203  Q
    |||||||    
T  10055818 agacaaa 10055812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 10067126 - 10066922
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||||||||    
T  10067126 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgtcacg 10067027  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  10067026 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttga 10066929  T
Q  197 agacaaa 203  Q
    |||||||    
T  10066928 agacaaa 10066922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 103; E-Value: 3e-51
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 28503528 - 28503331
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| |||| ||||||||||| ||||||||||||||||||||||   || ||||||||||||||||| |||||| |||||    
T  28503528 cacgatttgcgtctgacccaaggt-tgacaagtccttatcagggatacttaacgagcaagtttctgaattgtgtcacgatttcccaagatcgtgccacga 28503430  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  || |||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  28503429 tttggcgtccagcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaag 28503331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 19 - 213
Target Start/End: Complemental strand, 26928273 - 26928078
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  | | ||||||||||||||||| |  |||||||||||||| | ||| || |||||||||||| ||||||||||| |     
T  26928273 caaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagattgtgtcacgatttggcaccctgcaaacc 26928174  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    |||||||||||   | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||    
T  26928173 agctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaat 26928078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 28501346 - 28501164
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| ||||||||||| ||||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||||| |   |||||||    
T  28501346 acccaaggt-tgacaagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggtgtcctgcaa 28501248  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||    
T  28501247 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccaggccacaaatttgaag 28501164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 18656843 - 18657017
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-ca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||    
T  18656843 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 18656942  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  18656943 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 18657017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 1 - 194
Target Start/End: Complemental strand, 27352291 - 27352097
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |  |||||||||||||||||||||||||  |||| ||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  27352291 cacgatttgcgtccgtcccaaggtatgaccagtccttatcagtgataattaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 27352192  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaattt 194  Q
    ||| |    |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||||| |||||||||||||    
T  27352191 tttggtgttctgcaaacaagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttttctgttcttcgagaccacaaattt 27352097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 10208989 - 10208778
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||| ||||||||||||||||  |||||||||||||||| ||  |||||||| ||||    
T  10208989 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatatttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgccacg 10208890  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||| |||||||||||||||||| |||||||||||||    
T  10208889 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcatgatttccctgttcttccaaaccacaaatttga 10208792  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  10208791 agac-aatctcaaca 10208778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 10211189 - 10210978
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||| ||||| ||  |||||||| ||||    
T  10211189 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcatgattttcccaaaatcgtgccacg 10211090  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| ||  |||||| |||||||| ||||||||||||||||||||||||||||||||| ||||||||||| |    
T  10211089 attt-gcacccctgcaaccctaactcacggcatcct-aaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaaaccacaaatttaa 10210992  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  10210991 agac-aatctcaaca 10210978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 85 - 211
Target Start/End: Original strand, 7782586 - 7782712
Alignment:
Q  85 caaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccaga 184  Q
    |||||||||||||||||| ||||||||||| | ||||||| ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||| |||    
T  7782586 caaatcgtgtcacgatttggcaccctgcaaaccagctcaccgcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttctaga 7782685  T
Q  185 ccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||| ||||||||||||    
T  7782686 ccacaaatttgaagccaaatctcaaca 7782712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 33386302 - 33386137
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||| | |||| |||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||    
T  33386302 acttaaccagcaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 33386203  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||| ||||||||||||||| |||||||| | |||||||||||||||| ||||||||||||    
T  33386202 gatgccaaattcgtgtcacgatttctctgttctttcggaccacaaatttgaagccaaatctcaaca 33386137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 37408236 - 37408036
Alignment:
Q  10 cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccc 109  Q
    ||||| |||||||||| |||||  |||||||  | | ||||||| | ||||||| |  ||||||||||||||| |  ||||||| ||||||||  |||||    
T  37408236 cgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccaacaagtttgaaaatcgtgtcacgatttacacaatcgtgccacgatttgacaccc 37408138  T
Q  110 tgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaa 209  Q
    ||||| | ||||||||||||  | ||||||||||||||||||| |||||||||||||||||  |||||||||| ||||||||||||||| ||||||||||    
T  37408137 tgcaaaccagctcacggcactacaaaatcgtgtcacgatgccacaatcgtgtcacgatttctttgttcttccaaaccacaaatttgaagccaaatctcaa 37408038  T
Q  210 ca 211  Q
    ||    
T  37408037 ca 37408036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 8738733 - 8738585
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  8738733 cacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 8738634  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| |||||||||||||||  |||||| |||||||||    
T  8738633 tttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 8738585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 1 - 148
Target Start/End: Complemental strand, 9090971 - 9090823
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  9090971 cacgatttgcgtccgttccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 9090872  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| |||||||||||||||  |||||| |||||||||    
T  9090871 tttagcgtcctgcaaactagctcacggcaccttgaaatcatgtcacgat 9090823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 47 - 212
Target Start/End: Original strand, 37726134 - 37726300
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| | ||||||| |  |||||||||||||| | |||| ||||||||||||||  |||||||||| | ||||||||||| | | ||||||||||||    
T  37726134 acttaaccaacaagtttgaaaatcgtgtcacgattccacaaaatcgtgtcacgatttgacaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 37726233  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    |||  |||| ||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  37726234 gatatcaaattcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 37726300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 211
Target Start/End: Original strand, 27453416 - 27453581
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||| | || |||| ||||||||||| ||||||| ||| | ||||||||||| | | ||||||||||||    
T  27453416 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcatgtcacgatttggcaccctacaaaccagctcacggcatcacaaaatcgtgtcac 27453515  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||| ||||||||| ||||| ||| |||| |||||||||||||||||| ||||||||||||    
T  27453516 gatgccaaattcgtgtcacaatttctctgctctttcagaccacaaatttgaagccaaatctcaaca 27453581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 26 - 213
Target Start/End: Complemental strand, 2672604 - 2672416
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | |||     
T  2672604 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2672505  T
Q  124 cggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    ||||| | ||||  ||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||  |||||||    
T  2672504 cggcatctccga--tcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaattccaacaat 2672416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 26 - 204
Target Start/End: Complemental strand, 2676760 - 2676581
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  ||| |||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| || | |||     
T  2676760 tgaccagtccttatcagagattcttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttggctcc 2676661  T
Q  124 cggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    || || | ||||  ||||||||||||  |||||||||| ||||||| | ||||||||||||||||||||||||||| |||||    
T  2676660 cgacatctccga--tcgtgtcacgattacaaaatcgtgacacgattcctctgttcttccagaccacaaatttgaagccaaat 2676581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 19 - 148
Target Start/End: Original strand, 32143754 - 32143884
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  | | ||||||||||||||||| |  |||||||||||||| | ||| ||||||||||||||| ||||||||||| ||    
T  32143754 caaggtacgacctgtccttatcttgaaaacttaacgagcaagtttgaaaatcgtgtcacgattccacaagatcgtgtcacgatttggcaccctgcaaact 32143853  T
Q  118 agctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||||||||||| | | |||||||||||||||    
T  32143854 agctcacggcatcacaaaatcgtgtcacgat 32143884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 153 - 213
Target Start/End: Complemental strand, 45282642 - 45282583
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  45282642 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaacaat 45282583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 6718345 - 6718288
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  6718345 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac-aatctcaaca 6718288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 8512642 - 8512815
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  8512642 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 8512741  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  8512742 ctgc-ctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 8512815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 32475885 - 32475966
Alignment:
Q  25 atgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 105  Q
    |||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  32475885 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 32475966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 25 - 105
Target Start/End: Original strand, 32480743 - 32480824
Alignment:
Q  25 atgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgc 105  Q
    |||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||||||    
T  32480743 atgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgattttgc 32480824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 32143868 - 32143928
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  32143868 caaaatcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 32143928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 8517522 - 8517695
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  8517522 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 8517621  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   ||||||||||||   |||||||||| ||||||| | ||||||| | | ||||| |||||||||    
T  8517622 ctgc-ctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcctaaaccactaatttgaag 8517695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 47 - 148
Target Start/End: Complemental strand, 27986103 - 27986001
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||| | || |||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||    
T  27986103 acttaaccagcaagtttgaaaatcgtgtcacgattccacacaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcac 27986004  T
Q  146 gat 148  Q
    |||    
T  27986003 gat 27986001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 24968519 - 24968692
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  24968519 tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 24968618  T
Q  124 c-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | | | |||||  |||||||||||||  | |||||||| ||||||| |  |||||||||| ||||| |||||||||    
T  24968619 ctgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctttgttcttccaaaccactaatttgaag 24968692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 27974493 - 27974433
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||||| ||||||    
T  27974493 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatttcaaca 27974433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Complemental strand, 27986017 - 27985957
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||  ||||||||||||    
T  27986017 caaaatcgtgtcacgatttctctgttattccaaaccacaaatttgaaatcaaatctcaaca 27985957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 134 - 198
Target Start/End: Original strand, 36029640 - 36029704
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||| |||| ||  ||||||||||||||||||| ||||||||||| |||||||||||||||    
T  36029640 aaatcgtgacacgttgataaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 36029704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 153 - 201
Target Start/End: Complemental strand, 40734132 - 40734084
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 201  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  40734132 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagaca 40734084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 152 - 211
Target Start/End: Original strand, 40845220 - 40845279
Alignment:
Q  152 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||| ||||||| ||| | || |||||||||||||||||||||||    
T  40845220 aaaatcgtgtcacgatttctctgttctcccaaaacataaatttgaagacaaatctcaaca 40845279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 16264896 - 16264941
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16264896 aaatcgtgtcacgatttcgctgttcttccaaaccacaaatttgaag 16264941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 21711768 - 21711813
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  21711768 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 21711813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 27027273 - 27027318
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  27027273 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 27027318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 30709316 - 30709271
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  30709316 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 30709271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 8738593 - 8738554
Alignment:
Q  159 tgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  8738593 tgtcacgatttctctgttcttccagaccacaaatttgaag 8738554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 159 - 198
Target Start/End: Complemental strand, 9090831 - 9090792
Alignment:
Q  159 tgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  9090831 tgtcacgatttctctgttcttccagaccacaaatttgaag 9090792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 133 - 212
Target Start/End: Original strand, 27038588 - 27038667
Alignment:
Q  133 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    |||||||||||||| ||   |||||||||||||||||| ||||| ||||| |||||||| |||||| ||| | |||||||    
T  27038588 gaaatcgtgtcacgttgatgaaatcgtgtcacgatttctctgtttttccaaaccacaaacttgaagccaattttcaacaa 27038667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 32475997 - 32476059
Alignment:
Q  136 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32475997 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32476059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 198
Target Start/End: Original strand, 32480855 - 32480917
Alignment:
Q  136 atcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| | |||||||| ||||||| | ||||||| ||| |||||||||||||||    
T  32480855 atcgtgtcacgatggccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaag 32480917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 211
Target Start/End: Complemental strand, 39032075 - 39032017
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||| ||||||||||| || |||||||||||| ||| | ||||||    
T  39032075 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaagccaattttcaaca 39032017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 55 - 201
Target Start/End: Complemental strand, 40735161 - 40735015
Alignment:
Q  55 agcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatcta-gctcacggcaccccgaaatcgtgtcacgatgcca 152  Q
    ||||||||| |  ||||||||||| ||||||||| ||||| |||||||  ||||||||||| | | |||||| ||     ||||||||| |||| ||       
T  40735161 agcaagtttgaaaatcgtgtcacgttttcccaaaatcgtgacacgattgagcaccctgcaaaccatgctcactgcttg--gaaatcgtgacacgttgatg 40735064  T
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagaca 201  Q
    |||||||||||||||||  |||||| |||| ||||||||||||||||||    
T  40735063 aaatcgtgtcacgatttatctgttcatccaaaccacaaatttgaagaca 40735015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 160 - 198
Target Start/End: Complemental strand, 1730959 - 1730921
Alignment:
Q  160 gtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||| ||||||||||| |||||||||||||||    
T  1730959 gtcacgatttctctgttcttccaaaccacaaatttgaag 1730921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 7782538 - 7782584
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt 63  Q
    ||||||| | ||||||||||||||| ||| |||||||||||||||||    
T  7782538 cccaaggcacgaccagtccttatcatggaaacttaacgagcaagttt 7782584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Complemental strand, 22172898 - 22172864
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  22172898 atcgtgccacgatttcccaaatcgtgtcacgattt 22172864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 35926057 - 35926101
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| ||| |||||||||||    
T  35926057 aaatcgtgtcacgatttctctgttcttccaaacc-caaatttgaag 35926101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 40592302 - 40592257
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| |||||||||||| | ||||||||| |||||||||||||||    
T  40592302 aaatcatgtcacgatttctccgttcttccaaaccacaaatttgaag 40592257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Original strand, 48438782 - 48438823
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 194  Q
    |||||||||||||||||| |||||||| || |||||||||||    
T  48438782 aaatcgtgtcacgatttctctgttcttacaaaccacaaattt 48438823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 6716322 - 6716290
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    ||||||||||||||| |||||||||||||||||    
T  6716322 atcgtgtcacgattttccaaatcgtgtcacgat 6716290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 157; Significance: 2e-83; HSPs: 57)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 22536642 - 22536853
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||| || |||| |||||||  | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  22536642 cacgatctgtgtaccacccaagaaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccacaattgtgccacga 22536741  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  22536742 ttttgcaccctgcaacctagctcacggcaccccgaaatcgtgtcacgatgccacaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 22536841  T
Q  200 caaatctcaacaa 212  Q
    | |||||||||||    
T  22536842 c-aatctcaacaa 22536853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 29720161 - 29719965
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||||||||     
T  29720161 cccaaggtatgaccagtccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcag 29720062  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
     ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29720061 actagctcacggcaccacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29719965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 24136273 - 24136485
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||    
T  24136273 cacgatttgcgtacgtcccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacga 24136372  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||| ||||||||||| ||||||||||||| | |||||| |||||||||||||||| |||||||||||||||  |||||||||||||||||||||||||      
T  24136373 tttggcaccctgcaaactagctcacggcatcacgaaattgtgtcacgatgccaaattcgtgtcacgatttctgtgttcttccagaccacaaatttgaaac 24136472  T
Q  200 caaatctcaacaa 212  Q
    ||||| |||||||    
T  24136473 caaatatcaacaa 24136485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 10593053 - 10592844
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| ||| |||  | ||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||    
T  10593053 cacgatctgcgtaccaccgaagaaacgaccagtccttatcacggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgccacga 10592954  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 199  Q
    ||||||||||||||| ||| |||||||||||| ||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10592953 ttttgcaccctgcaacctatctcacggcacccggaa-tcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaaga 10592855  T
Q  200 caaatctcaaca 211  Q
    | ||||||||||    
T  10592854 c-aatctcaaca 10592844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 213
Target Start/End: Complemental strand, 40379888 - 40379676
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40379888 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40379789  T
Q  100 ttttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||||  ||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||    
T  40379788 atttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaag 40379690  T
Q  199 acaaatctcaacaat 213  Q
    || ||||||||||||    
T  40379689 ac-aatctcaacaat 40379676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16546426 - 16546216
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16546426 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16546327  T
Q  100 ttttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||||  ||||||||||||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  16546326 atttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16546228  T
Q  199 acaaatctcaaca 211  Q
    || ||||||||||    
T  16546227 ac-aatctcaaca 16546216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 40382099 - 40381889
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  40382099 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 40382000  T
Q  100 ttttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||||  ||||||||||||||| |  |||||||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  40381999 atttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttctttcagaccacaaatttgaag 40381901  T
Q  199 acaaatctcaaca 211  Q
    || ||||||||||    
T  40381900 ac-aatctcaaca 40381889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 9789624 - 9789809
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||    
T  9789624 gaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 9789723  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9789724 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 9789809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 26177661 - 26177466
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||    |||||||||||||||||||  ||||||||||||||| |||||||||||     
T  26177661 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccatgatcgtgtcacgatttggcaccctgcaaa 26177562  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26177561 ccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagccaaatctcaaca 26177466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 18442048 - 18442233
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||    
T  18442048 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 18442147  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| |  |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18442148 gcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 18442233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 16544204 - 16543994
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacga-tttcccaaatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  16544204 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttcccaaatcgtgtcacga 16544105  T
Q  100 ttttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||| ||  ||||||||| ||||| |  |||||||||||||| ||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  16544104 atttgcaccctgtaaccctagctcacagcacctc-caatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccaaaccacaaatttgaag 16544006  T
Q  199 acaaatctcaaca 211  Q
    || ||||||||||    
T  16544005 ac-aatctcaaca 16543994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 33 - 211
Target Start/End: Complemental strand, 29722332 - 29722152
Alignment:
Q  33 tccttatcaaggatacttaacgagcaagttt-cacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcacc 130  Q
    ||||||||| ||| ||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||| ||||| ||||  ||||||||| |||||    
T  29722332 tccttatcatggaaacttaacgagcaagtttgcacaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccatgcagactagctcacagcacc 29722233  T
Q  131 ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
     ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29722232 acgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 29722152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 27450200 - 27450397
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  27450200 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 27450298  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27450299 tttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 27450397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 29751534 - 29751724
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||                    ||||||||||||||    
T  29751534 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcac--------------------aatcgtgtcacgat 29751613  T
Q  101 tttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagac 200  Q
    || ||||||||||| ||||||||||||||| ||||||||||||  ||||||||| || ||||||||||||||||||||||||||||||||||||||||||    
T  29751614 ttggcaccctgcaacctagctcacggcaccacgaaatcgtgtcgtgatgccaaattcatgtcacgatttccctgttcttccagaccacaaatttgaagac 29751713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 30631763 - 30631936
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  |||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||| ||  ||||||| || ||||||    
T  30631763 tgaccagtccttatcagagatacttaacgagcaagtttctgaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcgtcctgcaaactggctcac 30631862  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  30631863 ggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 30631936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 27445357 - 27445554
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  27445357 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 27445455  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  27445456 tttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttctagaccacaaatttgaag 27445554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43599108 - 43599306
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  43599108 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 43599206  T
Q  100 ttttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43599207 tttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43599306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43604600 - 43604798
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  43604600 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 43604698  T
Q  100 ttttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43604699 tttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43604798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 43610092 - 43610290
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  43610092 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 43610190  T
Q  100 ttttgcaccctgcaatctagctcacggcacccc-gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| |||  ||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  43610191 tttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgacgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43610290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25077916 - 25077713
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  25077916 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga 25077817  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25077816 ttt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 25077719  T
Q  198 gacaaa 203  Q
    ||||||    
T  25077718 gacaaa 25077713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 25135885 - 25135682
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  25135885 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgacacga 25135786  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| | ||| | |||||||||||||| | || ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25135785 ttt-gcacccctacaaccctagctcacggcacctccaa-tcgcgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 25135688  T
Q  198 gacaaa 203  Q
    ||||||    
T  25135687 gacaaa 25135682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 16407836 - 16407641
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| |||| |||||||||| ||| |||||||||||||||||    |||||||||||||| | ||| ||||||||||||||| |||||||||||     
T  16407836 cccaaggtacgaccggtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaa 16407737  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | | |||||||||||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  16407736 ccagctcacggcatcacaaaatcgtgtcacgatgtcaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 16407641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 1456832 - 1456650
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| ||||||||||| ||||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||| ||    
T  1456832 acccaaggta-gacaagtccttatcagggatacttaacaagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgtaa 1456734  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1456733 actagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1456650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 87 - 211
Target Start/End: Original strand, 29752266 - 29752390
Alignment:
Q  87 aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagacc 186  Q
    ||||||| |||||||| ||||||||||| ||||||||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  29752266 aatcgtgccacgatttggcaccctgcaacctagctcacggcagcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagacc 29752365  T
Q  187 acaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||||||||    
T  29752366 acaaatttgaagacaaatctcaaca 29752390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 26170552 - 26170357
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||    ||  |||||||||||||||  ||||||||||||||| |||||||||||     
T  26170552 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaattatgtcacgatttcccacgatcgtgtcacgatttggcaccctgcaaa 26170453  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||||||||||||||| |||| |||||||||| |||| |||||||    
T  26170452 ccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttccctgttcttccataccataaatttgaagccaaaactcaaca 26170357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 16409272 - 16409077
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||| ||| ||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||| |||||||||| |||| ||||| |||||     
T  16409272 cccaatgtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgattcctcaagatcgtgtcacaatttggcaccttgcaaa 16409173  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | |||||||| || | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||| ||||||||||||    
T  16409172 ccagctcacgacatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagaccacaaatttgaagccaaatctcaaca 16409077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 33 - 198
Target Start/End: Complemental strand, 29402728 - 29402562
Alignment:
Q  33 tccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcaccc 131  Q
    |||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| |||||||| |||  |     
T  29402728 tccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactagctcatggccact 29402629  T
Q  132 cgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  29402628 tgaaatcgtgccacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 29402562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 15045095 - 15045267
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    ||||||||||||||||  ||||||||| |||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||||||    
T  15045095 tgaccagtccttatcagtgatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactggctcac 15045194  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||| | | ||||||||||||||| ||||||||||||||||||||| ||||||||||| || ||||||||||||    
T  15045195 ggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 15045267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 211
Target Start/End: Original strand, 15465000 - 15465125
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||||| | ||||||||||| | | ||||||||||||||| ||||| ||||||||||||||| |||||||| |||||    
T  15465000 aaatcgtgtcacgatttggcaccctgcaaaccagctcacggcatcacaaaatcgtgtcacgataccaaattcgtgtcacgatttctctgttctttcagac 15465099  T
Q  186 cacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| ||||||||||||    
T  15465100 cacaaatttgaagccaaatctcaaca 15465125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 28807261 - 28807088
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| | ||||||||  ||||||||||||||||||||| |||||| |||||||||||||||||||| || | ||||    
T  28807261 tgaccagtccttatcagagatacttaaccaacaagtttctggatcgtgtcacgatttcccaagatcgtgccacgattttgcaccctgcaaacttggctca 28807162  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| | | | |||||||||||||  |||||||||| ||||||| | |||||||||||||||| ||||||||||    
T  28807161 cggcatctc-agatcgtgtcacgattgcaaaatcgtgacacgattcctctgttcttccagaccataaatttgaag 28807088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 9352972 - 9352807
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| || ||||||| ||||||||  |||||||||| | |||||||||||   | ||||||||||||    
T  9352972 acttaaccagcaagtttgaaaatcgtgtcacgatttcacagaatcgtgccacgatttgacaccctgcaaaccagctcacggcattacaaaatcgtgtcac 9352873  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||| ||||| ||||||||||| |||||||| || ||||||||||||||| ||||||||||||    
T  9352872 gatgccacaatcgcgtcacgatttctctgttctttcaaaccacaaatttgaagccaaatctcaaca 9352807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 36931968 - 36931843
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||||| | |||||||| || | | |||||||| |||||||||||| ||||||||||||||| ||||||||||| ||    
T  36931968 aaatcgtgtcacgatttggcaccctgcaaaccagctcacgacatcacaaaatcgtgccacgatgccaaattcgtgtcacgatttctctgttcttccaaac 36931869  T
Q  186 cacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||  |||||||||||    
T  36931868 cacaaatttgaagcgaaatctcaaca 36931843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 43592663 - 43592811
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  43592663 cacgatttgcgtctgacccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 43592761  T
Q  100 ttttgcaccctgcaatctagctcacggcaccc-cgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| |||||||||||| |||  ||||||||||||||||    
T  43592762 tttggcgtcctgcaaactagctcacggcccccttgaaatcgtgtcacgat 43592811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 31180640 - 31180787
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   ||||||||| ||||||||||||||||  ||||||||||||| |||| ||   |||||||||||||||||||| |||||| |||||    
T  31180640 cacgatttgcgtctgacccaaggt-tgaccagtccttatcagtgatacttaacgagaaagtctctgaatcgtgtcacgatttcccaagatcgtgccacga 31180738  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| |||||||||| ||||  ||||||||||||||||    
T  31180739 tttggcgtcctgcaaactagctcacgacaccttgaaatcgtgtcacgat 31180787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 204
Target Start/End: Complemental strand, 37556308 - 37556131
Alignment:
Q  28 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctcacg 125  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||| ||||||||| |||||| ||||||||  | || |  || || | ||||||    
T  37556308 accagtccttatcagagatacttaaccagcaagtttctagatcgtgtcacaatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37556209  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    ||| | | | |||||||||||||  | |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37556208 gcatctc-agatcgtgtcacgattaccaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37556131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 28 - 204
Target Start/End: Complemental strand, 37561130 - 37560953
Alignment:
Q  28 accagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctcacg 125  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||||||||||||||||||| |||||| ||||||||  | || |  || | | |||||||    
T  37561130 accagtccttatcagagatacttaaccagcaagtttctggatcgtgtcacgatttcccaagatcgtgccacgatttgcctccatcaaaacttggctcacg 37561031  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    ||| | | | |||||||||||||    |||||||||||||||| | ||||||||||||||||||||||||||| |||||    
T  37561030 gcatctc-agatcgtgtcacgattatcaaatcgtgtcacgattactctgttcttccagaccacaaatttgaagccaaat 37560953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 2785777 - 2785963
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  2785777 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 2785876  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  2785877 cggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 2785963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 33768586 - 33768772
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  33768586 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33768685  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33768686 cggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33768772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 33791718 - 33791904
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  33791718 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 33791817  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  |||||||||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  33791818 cggcatctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 33791904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 19 - 128
Target Start/End: Original strand, 38219837 - 38219947
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||||||||| ||| ||||||| ||||||||| |  |||||||||| ||||||||| ||||||||||||||| ||||||| ||| |     
T  38219837 caaggtacgaccagtccttatcatggaaacttaacaagcaagtttgaaaatcgtgtcacaatttcccaagatcgtgtcacgatttggcaccctacaaacc 38219936  T
Q  118 agctcacggca 128  Q
    |||||||||||    
T  38219937 agctcacggca 38219947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 82
Target Start/End: Original strand, 35388104 - 35388169
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt 82  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |  |||||||||| ||||    
T  35388104 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacaattt 35388169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 26 - 212
Target Start/End: Complemental strand, 31396675 - 31396488
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct-agctca 123  Q
    ||||||||||||||||  || ||||||| | ||||| ||   |||||||||||||||||||| |||||| |||||||||||  || |||| || ||||||    
T  31396675 tgaccagtccttatcagagaaacttaaccaacaagtgtctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 31396576  T
Q  124 cggcacc-ccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    | ||  | ||||  ||||||||||||  | |||||||| ||||||| | ||||||| ||| ||||||||||||||| ||| | |||||||    
T  31396575 ctgcctctccga--tcgtgtcacgattgccaaatcgtgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaacaa 31396488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 161 - 211
Target Start/End: Original strand, 35388196 - 35388246
Alignment:
Q  161 tcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  35388196 tcacgatttctctgttcttccagaccacaaatttgaagtcaaatctcaaca 35388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 31180773 - 31180818
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  31180773 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 31180818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 43592797 - 43592842
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  43592797 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 43592842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 153 - 212
Target Start/End: Original strand, 14520796 - 14520855
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    |||||||||||||||||| ||||||||||| ||||||||||||||| ||| | |||||||    
T  14520796 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaa 14520855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 26 - 211
Target Start/End: Complemental strand, 31401532 - 31401346
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  || ||||||  ||||||||||   ||| |||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  31401532 tgaccagtccttatcagagaaacttaagcagcaagtttctgaatcatgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctca 31401433  T
Q  124 c-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | | | | |||  |||||||||||||  | |||||||| ||||||| | || |||| ||| ||||||||||||||| ||| | ||||||    
T  31401432 ctgcctctccg--atcgtgtcacgattgccaaatcgtgacacgattcctctattctcccaaaccacaaatttgaagccaattttcaaca 31401346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 43592636 - 43592670
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||||||||||||||||||||||||||||||||    
T  43592636 atcgtgtcacgatttcccaaatcgtgtcacgattt 43592670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 43599081 - 43599115
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||||||||||||||||||||||||||||||||    
T  43599081 atcgtgtcacgatttcccaaatcgtgtcacgattt 43599115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 43604573 - 43604607
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||||||||||||||||||||||||||||||||    
T  43604573 atcgtgtcacgatttcccaaatcgtgtcacgattt 43604607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 43610065 - 43610099
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||||||||||||||||||||||||||||||||    
T  43610065 atcgtgtcacgatttcccaaatcgtgtcacgattt 43610099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 10593080 - 10593048
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  10593080 atcgtgtcacgatttcccaaatcgtgtcacgat 10593048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 153 - 203
Target Start/End: Complemental strand, 11916502 - 11916452
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 203  Q
    |||| ||||||||||||| |||||||| || ||||||||||||||| ||||    
T  11916502 aaattgtgtcacgatttctctgttctttcaaaccacaaatttgaagccaaa 11916452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 27445330 - 27445364
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  27445330 atcgtgccacgatttcccaaatcgtgtcacgattt 27445364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 27450173 - 27450207
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    |||||| ||||||||||||||||||||||||||||    
T  27450173 atcgtgccacgatttcccaaatcgtgtcacgattt 27450207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 68 - 102
Target Start/End: Original strand, 29751507 - 29751541
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgattt 102  Q
    ||||||||||||||| |||||||||||||||||||    
T  29751507 atcgtgtcacgattttccaaatcgtgtcacgattt 29751541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 12083708 - 12083667
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 194  Q
    |||||||||||||||||| ||||||||||| |||| ||||||    
T  12083708 aaatcgtgtcacgatttctctgttcttccaaaccataaattt 12083667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 139; Significance: 9e-73; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 139; E-Value: 9e-73
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 9296072 - 9295874
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| | ||||||||||||||||||||||||||||||||||||| |||||||||||   |||||||||||||||||||| |||||| |||||    
T  9296072 cacgatttgcgtccgacccaaggtatgaccagtccttatcaaggatacttaatgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 9295973  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||| ||||||| |||||||||||||||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9295972 tttggcatcctgcaaactagctcacggcaccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9295874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 14291915 - 14292113
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||||||||||||||||||||||||||||||||  | |||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  14291915 cacgatttgcgtacaacccaaggtatgaccagtccttatcagtggtacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 14292014  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14292015 tttggcgtcctgcaaactagctcacggcacctcgagatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 14292113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 1 - 198
Target Start/End: Complemental strand, 11098597 - 11098399
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||||||||||||||| ||||||||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  11098597 cacgatttgcgtacaacccaaggtttgaccagtccttatcagtgatacttaacgagcaagtttctaaatcgtgtcacgatttcccaagatcgtgccacga 11098498  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||||||  ||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  11098497 tttggcgtcctgcaaactagctcacggcaccttgaaatcgtgtcactatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 11098399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 25410073 - 25410267
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  25410073 caaggtacgaccattccttatcaaggatacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 25410172  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    | ||||||||| | | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||| ||||||||    
T  25410173 atctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaaactcaacaa 25410267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 212
Target Start/End: Original strand, 12647757 - 12647968
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | |||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| ||||||| |||||    
T  12647757 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttatggatcgtgtcacgatttcccacaatcgtgccacga 12647856  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  12647857 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 12647954  T
Q  198 gacaaatctcaacaa 212  Q
    ||| |||||||||||    
T  12647955 gac-aatctcaacaa 12647968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 212
Target Start/End: Original strand, 3492184 - 3492378
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  ||| |||||||||||||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  3492184 caaggtacgacctgtccttatcctggaaacttaacgagcaagtttcagaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 3492283  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||| | | ||||||||||||||||||||| ||||||||| ||||| |||||||| |||||||||||||||||| |||||||||||||    
T  3492284 agctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacaatttctctgttctttcagaccacaaatttgaagccaaatctcaacaa 3492378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 30833114 - 30832921
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  ||| ||||||||||||||||| |  |||||||||||||||||||| ||||||||||||||| ||||||||||| |     
T  30833114 caaggtacgacctgtccttatcctggaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 30833015  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||| | |||||||||||||||||| |||| || |||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  30833014 agctcacggcatcacgaaatcgtgtcacgatgtcaaattcatgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 30832921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 211
Target Start/End: Complemental strand, 32289343 - 32289148
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| ||||||||||||||| ||| |||||||||||||||||    |||||||||||||| | ||| ||||||||| ||||| |||||||||||     
T  32289343 cccaaggtacgaccagtccttatcatggaaacttaacgagcaagttttcaaatcgtgtcacgattcctcaagatcgtgtcaagatttggcaccctgcaaa 32289244  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    | ||||||||||| | | ||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  32289243 ccagctcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 32289148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 27 - 211
Target Start/End: Complemental strand, 6266459 - 6266274
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||| ||||||||| ||| |||||||||| ||||||    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||    
T  6266459 gaccattccttatcatggaaacttaacgagtaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 6266360  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| | |||||| ||||||||||| |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  6266359 gcatcacgaaattgtgtcacgatgtcaaattcgtgtcacgatttccatgttcttccagaccacaaatttgaagacaaatctcaaca 6266274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 17 - 212
Target Start/End: Original strand, 4484728 - 4484924
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    ||||||||| |||||||||||||||  || |||||||||||||||||    |||||||||||||| |  || ||||||||||||||| |||||||||||     
T  4484728 cccaaggtacgaccagtccttatcatagaaacttaacgagcaagtttgcaaatcgtgtcacgattccttaagatcgtgtcacgatttggcaccctgcaaa 4484827  T
Q  116 ctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||||| |  |||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||  ||||||||||||    
T  4484828 ctagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagtaaaatctcaacaa 4484924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 40739264 - 40739457
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| |||||||||  | | ||||||||||||||||| |  || ||||||| ||| | ||| ||||||||||||||| ||||||||||| |     
T  40739264 caaggtacgacctgtccttatcctgaaaacttaacgagcaagtttgaaaattgtgtcacaattccacaagatcgtgtcacgatttggcaccctgcaaacc 40739363  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||   | ||||||||||||||||||||| ||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||    
T  40739364 agctcacggcataacaaaatcgtgtcacgatgccaaattcgtgtcacgatttgtctgttcttccagaccacaaatttgaagccaaatctcaaca 40739457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 31 - 198
Target Start/End: Complemental strand, 39811657 - 39811489
Alignment:
Q  31 agtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcacggcac 129  Q
    |||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| || ||| ||||       
T  39811657 agtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaacttgcttacggtca 39811558  T
Q  130 cccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  39811557 cttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 39811489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 87 - 215
Target Start/End: Original strand, 32247229 - 32247356
Alignment:
Q  87 aatcgtgtcacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||| |||||||||||| || |||| || | ||||||||| | | ||||||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  32247229 aatcgtgccacgattttgcatccagcaaacttggctcacggcatctc-aaatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagac 32247327  T
Q  186 cacaaatttgaagacaaatctcaacaataa 215  Q
    ||||||||||||| | ||| ||||||||||    
T  32247328 cacaaatttgaag-ccaatatcaacaataa 32247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 44310548 - 44310483
Alignment:
Q  133 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  44310548 gaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 44310483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 26 - 211
Target Start/End: Original strand, 19344824 - 19345010
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| || ||||||||  || |||| | | |||||    
T  19344824 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccatgattttgcttccagcaaacttggctca 19344923  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||| | |||  ||||| |||||||  | |||||| | ||||||| | ||||||||||| ||||||||||||||| ||| | ||||||    
T  19344924 cggcatctccg--atcgtatcacgattgccaaatcgcgacacgattcctctgttcttccaaaccacaaatttgaagccaattttcaaca 19345010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 197
Target Start/End: Original strand, 19349682 - 19349854
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| | ||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | | |||||    
T  19349682 tgaccagtccttatcagagatacttaaccaacaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttggctca 19349781  T
Q  124 cggca-ccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||||| | |||  |||||||||||||  | |||| | | ||||||| | ||||||||||| ||||||||||||||    
T  19349782 cggcatctccg--atcgtgtcacgattgccaaattgcgacacgattcctctgttcttccaaaccacaaatttgaa 19349854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 151 - 212
Target Start/End: Complemental strand, 28258729 - 28258668
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    |||||||||||||||||||| ||||| ||||| ||||||||||||||| ||||| |||||||    
T  28258729 caaaatcgtgtcacgatttctctgtttttccaaaccacaaatttgaagccaaatttcaacaa 28258668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 8389681 - 8389636
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  8389681 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8389636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 8 - 148
Target Start/End: Complemental strand, 28258853 - 28258713
Alignment:
Q  8 tgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgca 106  Q
    ||||||| |||||||||| |||||  |||||||  | | ||||||| ||||||||| |  |||||||||||||||| |||| | ||| ||||||||  ||    
T  28258853 tgcgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcgtgtcacgatttcacaaaattgtgccacgatttgaca 28258755  T
Q  107 ccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    |||||||| | |||||||||||   | |||||||||||||||    
T  28258754 ccctgcaaaccagctcacggcattacaaaatcgtgtcacgat 28258713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 198
Target Start/End: Complemental strand, 36757477 - 36757430
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||||  ||||||||||| |||||||||||||||    
T  36757477 caaaatcgtgtcacgatttttctgttcttccaaaccacaaatttgaag 36757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 153 - 215
Target Start/End: Complemental strand, 33528155 - 33528093
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 215  Q
    |||| ||||||||||||| ||||||||||| ||||||||||||||| ||| |  |||||||||    
T  33528155 aaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattaacaacaataa 33528093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 10706783 - 10706738
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  10706783 aaatcgtgtcacgatttctctgttcttccaaacaacaaatttgaag 10706738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 21630511 - 21630556
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| || ||||||||||||    
T  21630511 aaatcgtgtcacgatttctctgttcttccaaactacaaatttgaag 21630556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 39483443 - 39483488
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||| ||||| ||||||||||| |||||||||||||||    
T  39483443 aaatcgtgtcacaatttctctgttcttccaaaccacaaatttgaag 39483488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 33118696 - 33118752
Alignment:
Q  157 cgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    |||||||||||||| || |||| ||| | ||||||||||||||||||| ||||||||    
T  33118696 cgtgtcacgatttctctattctcccaaaacacaaatttgaagacaaatttcaacaat 33118752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 159 - 198
Target Start/End: Original strand, 20522794 - 20522833
Alignment:
Q  159 tgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||| ||||||||||| |||||||||||||||    
T  20522794 tgtcacgatttctctgttcttccaaaccacaaatttgaag 20522833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 101
Target Start/End: Complemental strand, 7450902 - 7450869
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgatt 101  Q
    ||||||||||| ||||||||||||||||||||||    
T  7450902 atcgtgtcacgttttcccaaatcgtgtcacgatt 7450869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 23078002 - 23077957
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||| || |||||||    
T  23078002 aaatcgtgtcacgatttctctgttcttccaaaccaaaattttgaag 23077957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 132; Significance: 1e-68; HSPs: 2)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 211
Target Start/End: Original strand, 9105 - 9308
Alignment:
Q  8 tgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcac 107  Q
    |||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||| ||||||||||| ||||    
T  9105 tgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaatcatgtcacgatttggcac 9204  T
Q  108 cctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctc 207  Q
    ||||||| | ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||    
T  9205 cctgcaaaccagctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctc 9304  T
Q  208 aaca 211  Q
    ||||    
T  9305 aaca 9308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 8 - 215
Target Start/End: Original strand, 11550 - 11757
Alignment:
Q  8 tgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcac 107  Q
    |||||||  ||||||||| ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||||||||||||||||||| ||||    
T  11550 tgcgtacgtcccaaggtacgaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccaaatcgtgtcacgatttggcac 11649  T
Q  108 cctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctc 207  Q
    ||||||| | ||||||||||| |  |||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||| ||||||||    
T  11650 cctgcaaaccagctcacggcatcatgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaattttgaagccaaatctc 11749  T
Q  208 aacaataa 215  Q
    ||||||||    
T  11750 aacaataa 11757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 131; Significance: 5e-68; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 19 - 212
Target Start/End: Complemental strand, 17624 - 17430
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||| ||||||||||||||||||||||||||||||| |  ||| |||||||||||||||| ||||||||||||||| ||||||||||| |     
T  17624 caaggtacgaccaatccttatcaaggatacttaacgagcaagtttgaaaatcatgtcacgatttcccaagatcgtgtcacgatttggcaccctgcaaacc 17525  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||| | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  17524 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaacaa 17430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 131; Significance: 5e-68; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 131; E-Value: 5e-68
Query Start/End: Original strand, 21 - 198
Target Start/End: Original strand, 24742387 - 24742565
Alignment:
Q  21 aggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag 119  Q
    ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||||||| ||||    
T  24742387 aggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaaactag 24742486  T
Q  120 ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24742487 ctcacggcacctcgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 24742565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 27 - 211
Target Start/End: Original strand, 31495717 - 31495902
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||||||||||||| ||| |||||||||||||||||    ||||||||||||||||||| |||||||||||||||| ||||||||||| | ||||||||    
T  31495717 gaccagtccttatcatggaaacttaacgagcaagtttgcaaatcgtgtcacgatttcccacaatcgtgtcacgatttggcaccctgcaaaccagctcacg 31495816  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||| | ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31495817 gcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 31495902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 126; E-Value: 5e-65
Query Start/End: Original strand, 19 - 211
Target Start/End: Original strand, 13992686 - 13992879
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||||||||||||||||||| | | ||||||||||||||||| |  ||||||||||||||||||||| |||||||||||||| ||||||||||| |     
T  13992686 caaggtatgaccagtccttatcatgaaaacttaacgagcaagtttgaaaatcgtgtcacgatttcccaaaatcgtgtcacgatttggcaccctgcaaacc 13992785  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||| || | ||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||    
T  13992786 agctcacgacatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttcttccagaccacaaatttgaagccaaatctcaaca 13992879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 7122477 - 7122274
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  7122477 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga 7122378  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||    
T  7122377 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaa 7122280  T
Q  198 gacaaa 203  Q
    ||||||    
T  7122279 gacaaa 7122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 8393192 - 8392982
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||  |||||||||||||||| ||||||||||| |||||    
T  8393192 cacgatctgcgtaccacccaagaaaagaccagtccttatcacggatacttaacgagcaagtttctggatcgtgtcacgattttcccaaatcgtgccacga 8393093  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8393092 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 8392995  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  8392994 gac-aatctcaaca 8392982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 27 - 203
Target Start/End: Complemental strand, 7124673 - 7124496
Alignment:
Q  27 gaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacgattttgcaccc-tgcaatc-tagctca 123  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||||| |||||| ||||| | |||||||    
T  7124673 gaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacgattt-gcacccctgcaaccctagctca 7124575  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaa 203  Q
    ||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  7124574 cggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccacaccacaaatttgaagacaaa 7124496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 1 - 198
Target Start/End: Original strand, 51520841 - 51521038
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    ||||||||||||   |||||||||| || |||||||||||| ||||||||||||||||||||||   ||||||||| |||||||||| |||||| |||||    
T  51520841 cacgatttgcgtctgacccaaggta-gatcagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcatgatttcccaagatcgtgccacga 51520939  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||| ||  ||||||| |||||||||||| ||  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  51520940 tttggcgtcctgcaaactagctcacggccccttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 51521038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 8395401 - 8395191
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt-cccaaatcgtgtcacga 99  Q
    |||||| ||||||| |||||||  | ||||||||||||||| ||||||||||||||||||||||  ||| |||||||||||| |||||||||||  ||||    
T  8395401 cacgatctgcgtaccacccaagaaacgaccagtccttatcacggatacttaacgagcaagtttctggattgtgtcacgattttcccaaatcgtgctacga 8395302  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  8395301 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgataccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 8395204  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  8395203 gac-aatctcaaca 8395191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 28468170 - 28467977
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||||||||||||||  || ||||||||||||||||| |  ||||||||||||||| |||| ||||||||||||||| ||||||||||| |     
T  28468170 caaggtacgaccagtccttatcatagaaacttaacgagcaagtttgaaaatcgtgtcacgattttccaagatcgtgtcacgatttggcaccctgcaaacc 28468071  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||| | | ||||||||| ||||||||||| ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||    
T  28468070 agctcacggcatcacaaaatcgtgttacgatgccaaattcgtgtcacgatttctctgttcttccataccacaaatttgaagccaaatctcaaca 28467977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 109; E-Value: 7e-55
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 56141706 - 56141523
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttg-caccctgca 113  Q
    |||||||||| ||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||||| |  ||||||    
T  56141706 acccaaggta-gaccagtccttatcagggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttggcgtcctgca 56141608  T
Q  114 atctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | |||||||||| | || | ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  56141607 aactagctcacgacccctccaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 56141523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 104; E-Value: 7e-52
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 9224093 - 9223911
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  9224093 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 9223995  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     ||||||||||||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9223994 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9223911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 9228880 - 9228698
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  9228880 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 9228782  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     | ||||||||||  |  |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  9228781 acgagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 9228698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 5733061 - 5733235
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagct-ca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||||||||||||||| ||  ||||||| || ||| ||    
T  5733061 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaacttgcttca 5733160  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||| |||||||| ||||||||||||||||||    
T  5733161 cggcaccacgaaatcgtgtcacgatgccaaaatcgtgtcatgatttctctgttctttcagaccacaaatttgaag 5733235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 212
Target Start/End: Complemental strand, 5135860 - 5135648
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | |||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| ||||    
T  5135860 cacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacg 5135761  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  5135760 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttga 5135663  T
Q  197 agacaaatctcaacaa 212  Q
    |||| |||||||||||    
T  5135662 agac-aatctcaacaa 5135648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 5138086 - 5137875
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccc--aaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | |||| |||||||||||||||||||||||||||||||||  |||||||||||||||| ||  |||||||| ||||    
T  5138086 cacgatttgcgtccgtcccaaggaacgaccggtccttatcaaggatacttaacgagcaagtttcttgatcgtgtcacgattttcccaaaatcgtgacacg 5137987  T
Q  99 attttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttga 196  Q
    |||| |||||| ||||| | || ||||||||| || ||||||| |||||||| |||||||||||||||||||||||||||||||||  ||||||||||||    
T  5137986 attt-gcacccctgcaaccctaactcacggcatcc-gaaatcgcgtcacgataccaaaatcgtgtcacgatttccctgttcttccaagccacaaatttga 5137889  T
Q  197 agacaaatctcaaca 211  Q
    |||| ||||||||||    
T  5137888 agac-aatctcaaca 5137875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 26 - 215
Target Start/End: Original strand, 3814421 - 3814609
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaatcgtgtcacgattttgcaccctgcaatctagctcacg 125  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||||||||| |||||||| ||  | ||||| || ||| |||    
T  3814421 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaaatcgtgacacgatttggcgtcttgcaaacttgcttacg 3814520  T
Q  126 gcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaataa 215  Q
    |   |  |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||| ||||||||||    
T  3814521 gtcacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-ccaatatcaacaataa 3814609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 148
Target Start/End: Original strand, 29761048 - 29761196
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacga 99  Q
    |||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||||| |||||| |||||    
T  29761048 cacgatttgcgtccgtaccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacga 29761147  T
Q  100 ttttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgat 148  Q
    ||| ||  ||||||| ||||||||||||||| |||||||||||||||||    
T  29761148 tttggcgtcctgcaaactagctcacggcacctcgaaatcgtgtcacgat 29761196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 18856124 - 18856297
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| ||| || |||||||||||| || |||| || | ||||    
T  18856124 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcttgccacgattttgcatccagcaaacttggctca 18856223  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  18856224 cggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 18856297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 45347502 - 45347329
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||    
T  45347502 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 45347403  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||| | | || |||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||    
T  45347402 cggcatctctaa-tcgtgtcacgattccaaaatcgtgtcacgatttctttgttcttccagaccacaaatttgaag 45347329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 170
Target Start/End: Complemental strand, 18712449 - 18712295
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  |||||||    
T  18712449 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcctgcaa 18712351  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 170  Q
     ||||||||||||  |  ||||||||||||||||||||||||||||||||||||||    
T  18712350 actagctcacggccacttgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 18712295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 86 - 212
Target Start/End: Complemental strand, 31985252 - 31985126
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||| | ||||||||||| | | | ||||||||||||||||||||| ||||||||||||||| |||||||| ||||     
T  31985252 aaatcgtgtcacgatttggcaccctgctaactagctcacggtatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagat 31985153  T
Q  186 cacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||||| |||||||||||||    
T  31985152 cacaaatttgaagccaaatctcaacaa 31985126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 212 - 288
Target Start/End: Complemental strand, 44882193 - 44882117
Alignment:
Q  212 ataaatgataccaatactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatgatgtcc 288  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  44882193 ataaatgataccactactcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatgacgtcc 44882117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 95 - 198
Target Start/End: Original strand, 18860406 - 18860509
Alignment:
Q  95 cacgattttgcaccctgcaatctag-ctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatt 193  Q
    |||||||||||| || |||| || | ||||||||||| | || |||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||    
T  18860406 cacgattttgcatccagcaaacttggctcacggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatt 18860504  T
Q  194 tgaag 198  Q
    |||||    
T  18860505 tgaag 18860509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 86 - 212
Target Start/End: Original strand, 5148177 - 5148303
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    |||||||| |||||||   |||||||||| |||||||||| ||   | ||||||||||||| ||  ||||||||||||||||||| || |||||||| ||    
T  5148177 aaatcgtgccacgattggtcaccctgcaaactagctcacgacattgcaaaatcgtgtcacggtgataaaatcgtgtcacgatttctctattcttccaaac 5148276  T
Q  186 cacaaatttgaagacaaatctcaacaa 212  Q
    ||||||||||||| ||| | |||||||    
T  5148277 cacaaatttgaagccaattttcaacaa 5148303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 26 - 147
Target Start/End: Complemental strand, 45356983 - 45356861
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| | | |||||    
T  45356983 tgaccagtccttatcagtgatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 45356884  T
Q  124 cggcaccccgaaatcgtgtcacga 147  Q
    ||||| | | ||||||||||||||    
T  45356883 cggcatctc-aaatcgtgtcacga 45356861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 153 - 214
Target Start/End: Original strand, 29761182 - 29761242
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaata 214  Q
    |||||||||||||||||| ||||||||||||||||||||||||||| ||||| |||||||||    
T  29761182 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag-caaatatcaacaata 29761242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 227 - 283
Target Start/End: Complemental strand, 44864299 - 44864243
Alignment:
Q  227 actcctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 283  Q
    |||||||||| ||||  ||||||||||||||||||||||||||||||||||||||||    
T  44864299 actcctcactcaggtaacacatttattcaatacacataaagctcacctcttggatga 44864243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 151 - 211
Target Start/End: Original strand, 5143807 - 5143867
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    |||||||||||||||||||| ||||||||||| ||||||||||||||| ||| | ||||||    
T  5143807 caaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaattttcaaca 5143867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 150 - 198
Target Start/End: Complemental strand, 8689097 - 8689049
Alignment:
Q  150 ccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  8689097 ccaaaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 8689049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 231 - 283
Target Start/End: Complemental strand, 44850040 - 44849988
Alignment:
Q  231 ctcactgaggtggcacatttattcaatacacataaagctcacctcttggatga 283  Q
    ||||| ||||||  |||||||||||||||||||||||||||||||||||||||    
T  44850040 ctcaccgaggtgatacatttattcaatacacataaagctcacctcttggatga 44849988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 16628403 - 16628358
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  16628403 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 16628358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 38151968 - 38151923
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  38151968 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 38151923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 154 - 198
Target Start/End: Original strand, 3778116 - 3778160
Alignment:
Q  154 aatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||    
T  3778116 aatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 3778160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 198
Target Start/End: Complemental strand, 5268750 - 5268704
Alignment:
Q  152 aaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||| |||||||||||| ||||||||||| |||||||||||||||    
T  5268750 aaaatcctgtcacgatttctctgttcttccaaaccacaaatttgaag 5268704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 6742946 - 6742901
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||| ||||||||||    
T  6742946 aaatcgtgtcacgatttctctgttcttccaaaccataaatttgaag 6742901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 10047932 - 10047977
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||  ||||||||||| |||||||||||||||    
T  10047932 aaatcgtgtcacgatttatctgttcttccaaaccacaaatttgaag 10047977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 194
Target Start/End: Complemental strand, 16622824 - 16622783
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaattt 194  Q
    |||||||||||||||||| ||||||||||| |||||||||||    
T  16622824 aaatcgtgtcacgatttctctgttcttccaaaccacaaattt 16622783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 8393219 - 8393187
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  8393219 atcgtgtcacgatttcccaaatcgtgtcacgat 8393187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 68 - 100
Target Start/End: Complemental strand, 8395428 - 8395396
Alignment:
Q  68 atcgtgtcacgatttcccaaatcgtgtcacgat 100  Q
    |||||||||||||||||||||||||||||||||    
T  8395428 atcgtgtcacgatttcccaaatcgtgtcacgat 8395396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 36314761 - 36314716
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36314761 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36314716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Complemental strand, 36328970 - 36328925
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| || |||||| | |||||||||||||||    
T  36328970 aaatcgtgtcacgatttctctattcttcgaaaccacaaatttgaag 36328925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 54867745 - 54867790
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| ||| || |||||||| |||||||||||||||    
T  54867745 aaatcgtgtcacgacttctctattcttccaaaccacaaatttgaag 54867790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 119; Significance: 8e-61; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 6070 - 5859
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattt--cccaaatcgtgtcacg 98  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||  ||||||| ||||    
T  6070 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgattttgccacaatcgtgacacg 5971  T
Q  99 attttgcaccctgcaa-tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    | ||||||||||||||  ||||||||||||||| |  |||||||||||||  ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  5970 aatttgcaccctgcaaccctagctcacggcacctc-caatcgtgtcacgactccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 5872  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  5871 gac-aatctcaaca 5859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 2975 - 3185
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||| ||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  2975 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaagaatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga 3074  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  3075 ttt-gcacccctgcaaccctagctcacggcatcc-gaaatcgtgtcacgatcccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 3172  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  3173 gac-aatctcaaca 3185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 118; Significance: 3e-60; HSPs: 1)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 19 - 211
Target Start/End: Complemental strand, 22132 - 21939
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||  ||||||| ||    
T  22132 caaggtacgacctgtccttatcagtgatacttaacgagcaagttttacaatcgtgtcacgatttcccaagatcgtgtcacgatttggcgtcctgcaaact 22033  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| ||||||||||||||||||||||| || |||| ||||||| ||||||||||||||||||||||||||  ||||||||||||    
T  22032 agctcacggcacctcgaaatcgtgtcacgatgccaaattcatgtcccgatttctctgttcttccagaccacaaatttgaaaccaaatctcaaca 21939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 114; Significance: 8e-58; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 1 - 211
Target Start/End: Original strand, 4100 - 4310
Alignment:
Q  1 cacgatttgcgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttccca-aatcgtgtcacga 99  Q
    |||||||||||| |  ||||||| | ||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||| ||||||| |||||    
T  4100 cacgatttgcgtccgtcccaaggaacgaccagtccttatcaaggatacttaacgagcaagtttctggatcgtgtcacgatttcccacaatcgtgccacga 4199  T
Q  100 ttttgcaccc-tgcaatc-tagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaa 197  Q
    ||| |||||| ||||| | ||||||||||||||   ||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4200 ttt-gcacccctgcaaccctagctcacggcaccta-aaatcgtgtcacgattccaaaatcgtggcacgatttccctgttcttccagaccacaaatttgaa 4297  T
Q  198 gacaaatctcaaca 211  Q
    ||| ||||||||||    
T  4298 gac-aatctcaaca 4310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 90; Significance: 2e-43; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 3522 - 3349
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctagctcac 124  Q
    |||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  ||| ||| |||||||||    
T  3522 tgactagtccttatcattgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtccttcaaactagctcac 3423  T
Q  125 ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||  |  ||||||||||||||||| |||||||||||||||||||| || ||||||||||||||||||||||||    
T  3422 ggccacttgaaatcgtgtcacgatgtcaaaatcgtgtcacgatttctcttttcttccagaccacaaatttgaag 3349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 87; Significance: 1e-41; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 26 - 198
Target Start/End: Original strand, 760 - 933
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatctag-ctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||| || |||| || | ||||    
T  760 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcatccagcaaacttggctca 859  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||| | || |||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||    
T  860 cggcacctccaa-tcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccataccacaaatttgaag 933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 84; Significance: 6e-40; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 84; E-Value: 6e-40
Query Start/End: Original strand, 16 - 198
Target Start/End: Complemental strand, 34748 - 34566
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    |||||||||| ||| |||||||||||  |||||||||||||||||||||   |||||||||||||||||||| |||||| |||||||| ||  | |||||    
T  34748 acccaaggta-gacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgatttggcgtcatgcaa 34650  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
     | | || |||||  |  ||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  34649 acaaactaacggccacttgaaatagtgtcacgatgccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 34566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 82; Significance: 9e-39; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 82; E-Value: 9e-39
Query Start/End: Original strand, 86 - 211
Target Start/End: Complemental strand, 8036 - 7911
Alignment:
Q  86 aaatcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagac 185  Q
    ||||||||||||||||| ||||||||||| | | ||||||||| | | ||||||||||||||||||||| ||||||||||||||| |||||||| |||||    
T  8036 aaatcgtgtcacgatttggcaccctgcaaaccaactcacggcatcacaaaatcgtgtcacgatgccaaattcgtgtcacgatttctctgttctttcagac 7937  T
Q  186 cacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||| ||||||||||||    
T  7936 cacaaatttgaagccaaatctcaaca 7911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 81; Significance: 4e-38; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 19 - 170
Target Start/End: Complemental strand, 675 - 523
Alignment:
Q  19 caaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatct 117  Q
    ||||||| ||||||||| ||||  ||| ||||||||||||| ||| |  |||||||||||||| | ||| ||||||||||||||| ||||||||||| ||    
T  675 caaggtacgaccagtccctatcctggaaacttaacgagcaaatttgaaaatcgtgtcacgattcctcaagatcgtgtcacgatttggcaccctgcaaact 576  T
Q  118 agctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttc 170  Q
    ||||||||||| | ||||||||||||||||||||||| |||||||||||||||    
T  575 agctcacggcatcacgaaatcgtgtcacgatgccaaattcgtgtcacgatttc 523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 75; Significance: 1e-34; HSPs: 3)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 10 - 211
Target Start/End: Complemental strand, 132953 - 132752
Alignment:
Q  10 cgtacaacccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcacc 108  Q
    ||||| |||||||||| |||||  |||||||  | | ||||||| ||||||||| |  ||| |||||||||| | |||| ||||||||||||||  |||     
T  132953 cgtacgacccaaggtacgaccaa-ccttatcctgaaaacttaaccagcaagtttgaaaatcatgtcacgattccacaaaatcgtgtcacgatttgacaca 132855  T
Q  109 ctgcaatctagctcacggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctca 208  Q
    |||||| | |||||||| || | | |||||||| |||||| ||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  132854 ctgcaaaccagctcacgacatcacaaaatcgtgccacgataccacaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaagacaaatctca 132755  T
Q  209 aca 211  Q
    |||    
T  132754 aca 132752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 6252 - 6297
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| ||||||||||| |||||||||||||||    
T  6252 aaatcgtgtcacgatttctctgttcttccaaaccacaaatttgaag 6297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 3060 - 3105
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    ||||||||||| |||||| ||||||||||| |||||||||||||||    
T  3060 aaatcgtgtcatgatttctctgttcttccaaaccacaaatttgaag 3105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 62; Significance: 8e-27; HSPs: 1)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 47 - 211
Target Start/End: Complemental strand, 1248 - 1083
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  |||||||||||||||| |||| ||||  ||||||||  |||||||||| | | ||||||  |   | ||||||||||||    
T  1248 acttaaccagcaagtttaaaaatcgtgtcacgatttcacaaaatcgtaccacgatttgacaccctgcaaaccaactcacgatattacaaaatcgtgtcac 1149  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    ||||||||||||||||||||||||  |||||||| || ||||||||||||||| ||||| ||||||    
T  1148 gatgccaaaatcgtgtcacgatttttctgttctttcaaaccacaaatttgaaggcaaatttcaaca 1083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1455 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold1455
Description:

Target: scaffold1455; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 1784 - 1721
Alignment:
Q  135 aatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1784 aatcgtgtcacgattccaaaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 1721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 55; Significance: 1e-22; HSPs: 2)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 47 - 204
Target Start/End: Complemental strand, 43599 - 43441
Alignment:
Q  47 acttaacgagcaagtttcacgatcgtgtcacgatttcccaaa-tcgtgtcacgattttgcaccctgcaatctagctcacggcaccccgaaatcgtgtcac 145  Q
    ||||||| ||||||||| |  ||| |||||||||||| |||| ||||  ||||||||  ||||||| || | |||||||| ||   | ||||||||||||    
T  43599 acttaaccagcaagtttgaaaatcatgtcacgatttcacaaaatcgtaccacgatttgacaccctgtaaaccagctcacgacattacaaaatcgtgtcac 43500  T
Q  146 gatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaat 204  Q
    ||||||| ||||||||||||||||| || |||||||| |||| |||||||||| |||||    
T  43499 gatgccacaatcgtgtcacgatttctctattcttccaaaccataaatttgaagccaaat 43441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 151 - 213
Target Start/End: Complemental strand, 36384 - 36322
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaat 213  Q
    ||||||||| ||| |||||| ||||||||||| ||||||||||||||| ||| | ||||||||    
T  36384 caaaatcgtatcatgatttctctgttcttccaaaccacaaatttgaagccaattttcaacaat 36322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 54; Significance: 5e-22; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 16 - 148
Target Start/End: Original strand, 8098 - 8230
Alignment:
Q  16 acccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaa 114  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||||||   ||||||||||||||| |||| |||||| |||||||| ||  |||||||    
T  8098 acccaaggt-tgacaagtccttatcagtgatacttaacgagcaagtttctgaatcgtgtcacgattttccaagatcgtgccacgatttggcgtcctgcaa 8196  T
Q  115 tctagctcacggcaccccgaaatcgtgtcacgat 148  Q
     ||||||||||||  |  ||||||||||||||||    
T  8197 actagctcacggccacttgaaatcgtgtcacgat 8230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 8216 - 8261
Alignment:
Q  153 aaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    |||||||||||||||||| |||||||||||||||||||||||||||    
T  8216 aaatcgtgtcacgatttctctgttcttccagaccacaaatttgaag 8261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 51; Significance: 3e-20; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 13969 - 13796
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  13969 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 13870  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  13869 ctgc-ctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 13796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 25 - 211
Target Start/End: Complemental strand, 18850 - 18663
Alignment:
Q  25 atgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctc 122  Q
    |||||||||| ||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | ||||||    
T  18850 atgaccagtctttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtggcacgattttgcttccagcaaacttagctc 18751  T
Q  123 ac-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaaca 211  Q
    || | | | |||  |||||||||||||  | |||||| | ||||||| | ||||||| ||| ||||||||||||||| ||| | ||||||    
T  18750 actgcctctccg--atcgtgtcacgattgccaaatcgcgacacgattcctctgttctcccaaaccacaaatttgaagccaattttcaaca 18663  T

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Target: scaffold0009 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 26 - 198
Target Start/End: Complemental strand, 176635 - 176462
Alignment:
Q  26 tgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaatc-tagctca 123  Q
    ||||||||||||||||  |||||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || |||| | |||||||    
T  176635 tgaccagtccttatcagagatacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaacttagctca 176536  T
Q  124 cggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | || | ||   ||||||||||||   |||||||||| ||||||| | ||||||| ||| ||||| |||||||||    
T  176535 ctgc-ctccctgatcgtgtcacgactgcaaaatcgtgacacgattcctctgttctcccaaaccactaatttgaag 176462  T

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Target: scaffold0259 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 1932 - 1751
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    |||||||| ||||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || ||||     
T  1932 cccaaggt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaa 1834  T
Q  116 c-tagctcac-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | | |||||| | | |||||  |||||||||||||  | |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  1833 cttggctcactgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 1751  T

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Target: scaffold0028 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 17 - 198
Target Start/End: Complemental strand, 148637 - 148456
Alignment:
Q  17 cccaaggtatgaccagtccttatcaaggatacttaacgagcaagtttcacgatcgtgtcacgatttcccaa-atcgtgtcacgattttgcaccctgcaat 115  Q
    |||||||| ||||||||||||||||  || ||||||| ||||||||||   |||||||||||||||||||| |||||| |||||||||||  || ||||     
T  148637 cccaaggt-tgaccagtccttatcagagaaacttaaccagcaagtttctgaatcgtgtcacgatttcccaagatcgtgccacgattttgcttccagcaaa 148539  T
Q  116 c-tagctcac-ggcaccccgaaatcgtgtcacgatgccaaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaag 198  Q
    | | |||||| | | |||||  |||||||||||||  | |||||||| ||||||| | ||||||||||| ||||| |||||||||    
T  148538 cttggctcactgcctccccg--atcgtgtcacgattgccaaatcgtgacacgattcctctgttcttccaaaccactaatttgaag 148456  T

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Target: scaffold0098 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 151 - 212
Target Start/End: Original strand, 45744 - 45805
Alignment:
Q  151 caaaatcgtgtcacgatttccctgttcttccagaccacaaatttgaagacaaatctcaacaa 212  Q
    |||||| ||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||    
T  45744 caaaattgtgtcacgatttctctgttcttccaaaccacaaatttgaagccaaatctcaacaa 45805  T

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Target: scaffold0466 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0466
Description:

Target: scaffold0466; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 134 - 168
Target Start/End: Complemental strand, 6784 - 6750
Alignment:
Q  134 aaatcgtgtcacgatgccaaaatcgtgtcacgatt 168  Q
    |||||||| ||||||||||||||||||||||||||    
T  6784 aaatcgtgccacgatgccaaaatcgtgtcacgatt 6750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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