View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_high_28 (Length: 255)
Name: NF8503_high_28
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_high_28 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 18 - 255
Target Start/End: Original strand, 43104176 - 43104413
Alignment:
| Q |
18 |
aatctcatccatattcattttgtatatgagttctgtatatatgatgtccnnnnnnnnnnnngttgtatcatcttcccacttgcaatgtccacagcttctt |
117 |
Q |
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| T |
43104176 |
aatctcatccatattcatttggcatataagtgctgtatatatgatgtccaaaaaataaaaagttgtatcatcttcccacttgcaatgtccacagcttctt |
43104275 |
T |
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| Q |
118 |
cctactcttcccacttgcaattcccacggagcactaccccttgctgccttgcacattctcttctttttctcacaaatccaacattctttacatcttccta |
217 |
Q |
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| T |
43104276 |
cttactcttcccacttgctattcccacggagcactaccccttgctgccttgcacattctcttctttttctcacaaatccaacattctttacatcttccta |
43104375 |
T |
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| Q |
218 |
cttgcaatttccataacatctccttttattcatcatct |
255 |
Q |
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|||||||||||||||||||||||||||||||||||||| |
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| T |
43104376 |
cttgcaatttccataacatctccttttattcatcatct |
43104413 |
T |
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