View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_low_32 (Length: 386)
Name: NF8503_low_32
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_low_32 |
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Alignment Details
Target: chr2 (Bit Score: 355; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 355; E-Value: 0
Query Start/End: Original strand, 18 - 376
Target Start/End: Complemental strand, 39365463 - 39365105
Alignment:
| Q |
18 |
aaggtaatagtgatcatatgattttttgtatgtatttaaaggtgtggatgacattgaaatagacatgaagttgcaaaaggtgacggtgaatggttttgct |
117 |
Q |
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| T |
39365463 |
aaggtaatagtgatcatatgattttttgtatttatttaaaggtgtggatgacattgaaatagacatgaagttgcaaaaggtgacggtgaatggttttgct |
39365364 |
T |
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| Q |
118 |
gatcagaagaaggttctaaaaagggttcgaaaaactggacttagggctgagttatggcagcttcctcacacaacagaatctcaaagtcaatattatcaac |
217 |
Q |
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| T |
39365363 |
gatcagaagaaggttctaaaaagggttcgaaaaactggacttagggctgagttatggcagcttcctcacacaacagaatctcaaagtcaatattatcaac |
39365264 |
T |
|
| Q |
218 |
aacacctttgcaatggccctatccctcattatgcttcacaaccttcctcatcttataactaccacaagcatggttatgatagtagtgatcctagccatta |
317 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39365263 |
aacacctttgcaatggccctatccctcattatgcttcacaaccttcctcatcttataactaccacaagcatggttatgatagtagtgatcctagccatta |
39365164 |
T |
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| Q |
318 |
tcactatccttctcaatcttcaatctttggccatcaaactggtgctacttttagtgatg |
376 |
Q |
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| T |
39365163 |
tcactatccttctcaatcttcaatctttggccatcaaactggtgctacttttagtgatg |
39365105 |
T |
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