View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_low_40 (Length: 344)
Name: NF8503_low_40
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_low_40 |
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Alignment Details
Target: chr2 (Bit Score: 270; Significance: 1e-151; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 270; E-Value: 1e-151
Query Start/End: Original strand, 2 - 326
Target Start/End: Original strand, 8038116 - 8038441
Alignment:
| Q |
2 |
tgcatagaatggccaagagttattccaaaacctaattcgaaagttattcctttggaagaaagagtgaaaagtcagaaatctcagttgcaacatattctta |
101 |
Q |
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| T |
8038116 |
tgcatagaatggccaagagttattccaaaacctaatttgaaagttattcctttggaagaaagagtgaaaagtcagaaatctcagttgcaacatattctta |
8038215 |
T |
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| Q |
102 |
agccaaaggctttctaagcctt-gttccacatattttcttttttcttggctggataagttttggttacgttgtgtttataacaacaatcggttgagaagt |
200 |
Q |
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| T |
8038216 |
agccaaaggctttttaagcctttgttccacatattttcttttttcttggctggataagttttagttacattgtgtttataacaacaatcggttgagaagt |
8038315 |
T |
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| Q |
201 |
aaaaagatacgaaaaacacggacacagaacggatgatgatacaatgtttggtatgggagttcggccaattgtgtttacttttgtgattgtagtgcagctg |
300 |
Q |
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| T |
8038316 |
aaaaagatacaaaaaacacggacagagaactgatgatgacacaatgtttggtcttggagttcggccaattgtgtttatttatgtgattgtagtgcagctg |
8038415 |
T |
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| Q |
301 |
caacacttttctattgatcaagtttg |
326 |
Q |
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| T |
8038416 |
caacacttttctattgatcaagtttg |
8038441 |
T |
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