View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_low_56 (Length: 295)
Name: NF8503_low_56
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_low_56 |
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Alignment Details
Target: chr1 (Bit Score: 77; Significance: 9e-36; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 77; E-Value: 9e-36
Query Start/End: Original strand, 185 - 277
Target Start/End: Complemental strand, 4717469 - 4717377
Alignment:
| Q |
185 |
ttcatatttaagttacaaaacattgaaatcgattttttaggtgggttctaacaccacacaatgaacaaactaaacctaaattaacaatctaac |
277 |
Q |
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| T |
4717469 |
ttcatatttaagttccaaaacattgaaatctattttttaggtgggttctaacagcacacaatcaacaaactaaacctaaattaacaatctaac |
4717377 |
T |
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