View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8503_low_57 (Length: 285)

Name: NF8503_low_57
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8503_low_57
NF8503_low_57
[»] chr7 (9 HSPs)
chr7 (112-265)||(25964239-25964391)
chr7 (42-118)||(25965709-25965785)
chr7 (38-88)||(15025149-15025199)
chr7 (42-82)||(8133851-8133891)
chr7 (21-88)||(8249698-8249765)
chr7 (22-81)||(9992610-9992669)
chr7 (42-81)||(46570027-46570066)
chr7 (49-81)||(29357801-29357833)
chr7 (44-88)||(46266661-46266705)
[»] chr1 (7 HSPs)
chr1 (22-89)||(24253679-24253746)
chr1 (15-81)||(22779223-22779289)
chr1 (52-88)||(29332279-29332315)
chr1 (31-81)||(38491045-38491095)
chr1 (48-81)||(1862901-1862934)
chr1 (15-88)||(8893853-8893926)
chr1 (22-83)||(14262757-14262818)
[»] chr3 (7 HSPs)
chr3 (42-81)||(54457153-54457192)
chr3 (41-82)||(11661219-11661260)
chr3 (42-81)||(166788-166827)
chr3 (42-72)||(37756469-37756499)
chr3 (22-63)||(1325368-1325409)
chr3 (23-88)||(50381707-50381772)
chr3 (41-81)||(23651125-23651165)
[»] chr5 (5 HSPs)
chr5 (44-88)||(1984247-1984291)
chr5 (42-81)||(3294083-3294122)
chr5 (52-81)||(38435917-38435946)
chr5 (22-82)||(17077360-17077420)
chr5 (49-81)||(20191442-20191474)
[»] chr8 (3 HSPs)
chr8 (44-83)||(22652681-22652720)
chr8 (49-83)||(10621438-10621472)
chr8 (46-88)||(40444698-40444740)
[»] chr6 (4 HSPs)
chr6 (19-78)||(5641723-5641781)
chr6 (33-84)||(7927116-7927167)
chr6 (35-82)||(7929123-7929170)
chr6 (46-83)||(1128479-1128516)
[»] chr4 (5 HSPs)
chr4 (22-88)||(55308072-55308137)
chr4 (22-83)||(38690664-38690725)
chr4 (22-83)||(45847962-45848023)
chr4 (44-88)||(27862889-27862933)
chr4 (23-79)||(33993656-33993712)
[»] chr2 (3 HSPs)
chr2 (18-88)||(12183767-12183837)
chr2 (20-88)||(25553179-25553247)
chr2 (46-82)||(30856577-30856613)


Alignment Details
Target: chr7 (Bit Score: 99; Significance: 7e-49; HSPs: 9)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 99; E-Value: 7e-49
Query Start/End: Original strand, 112 - 265
Target Start/End: Complemental strand, 25964391 - 25964239
Alignment:
Q  112 ttaatgacttaaccaaattattccaattttactaaaattagttaaaatgttttatgcttttnnnnnnnnnnnnnngtgagtgttttacctagatttgatg 211  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||              |||||||||||||||||||||| ||    
T  25964391 ttaatgacttaaccaaattattccaattttactaaaattagttaaaatgttttatgcttttaaaaaggaaaaaa-gtgagtgttttacctagatttggtg 25964293  T
Q  212 ttttcccaatgctcaagtgaaataaaataggttggactaacatcaacattatga 265  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  25964292 ttttcccaatactcaagtgaaataaaataggttggactaacatcaacattatga 25964239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 42 - 118
Target Start/End: Complemental strand, 25965785 - 25965709
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctcatgtggacgtagcagaggacttctttgtgtgttaatga 118  Q
    |||||||||||||||||||||| || ||||| |||||||||| | |||||||||||||||||||||||| |||||||    
T  25965785 ataaattatgcattatcccttaccaggtgagctaagctcatgggaacgtagcagaggacttctttgtgtcttaatga 25965709  T

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Target: chr7; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 38 - 88
Target Start/End: Complemental strand, 15025199 - 15025149
Alignment:
Q  38 ctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||||||| |||||||||||||||| ||| ||||||||||||||| ||||    
T  15025199 ctgtataaaatatgcattatcccttaccaaatgagttaagctcatggggac 15025149  T

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Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 42 - 82
Target Start/End: Original strand, 8133851 - 8133891
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctcat 82  Q
    |||||||||||||||||| |||||||||||| |||||||||    
T  8133851 ataaattatgcattatccattatcaagtgagctaagctcat 8133891  T

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Target: chr7; HSP #5
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 88
Target Start/End: Complemental strand, 8249765 - 8249698
Alignment:
Q  21 agttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||||| ||||| | ||| ||| |||||||||||||| ||| |||||||| |||||||||| ||||    
T  8249765 agttcgaaccccgacccctgcatatattatgcattatcctttaccaagtgagctaagctcatggggac 8249698  T

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Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 81
Target Start/End: Complemental strand, 9992669 - 9992610
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    ||||||| ||||||||||  ||| || ||||||||||||||||||| |||| ||||||||    
T  9992669 gttcgaaccccgatctctacatacataatgcattatcccttatcaaatgagctaagctca 9992610  T

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Target: chr7; HSP #7
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Original strand, 46570027 - 46570066
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  46570027 ataaactatgcattatcccttatcaagtgagctaagctca 46570066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 29357833 - 29357801
Alignment:
Q  49 atgcattatcccttatcaagtgagttaagctca 81  Q
    |||||||||||||||||||||||| ||||||||    
T  29357833 atgcattatcccttatcaagtgagctaagctca 29357801  T

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Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 88
Target Start/End: Complemental strand, 46266705 - 46266661
Alignment:
Q  44 aaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||| |||||||||||||| ||| ||||||||||||||| ||||    
T  46266705 aaattgtgcattatcccttaccaaatgagttaagctcatggggac 46266661  T

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Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 22 - 89
Target Start/End: Original strand, 24253679 - 24253746
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggacg 89  Q
    ||||||||||||| | ||| ||||||||||||||||||||||||||||||| |||||||||| |||||    
T  24253679 gttcgaatcccgacccctgcataaattatgcattatcccttatcaagtgagctaagctcatggggacg 24253746  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 22779289 - 22779223
Alignment:
Q  15 gtttggagttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    |||||| ||||||| |||||   ||||||||| |||||||||||||||| |||||||| ||||||||    
T  22779289 gtttggggttcgaaccccgactcctgtataaaatatgcattatcccttaccaagtgagctaagctca 22779223  T

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Target: chr1; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 52 - 88
Target Start/End: Complemental strand, 29332315 - 29332279
Alignment:
Q  52 cattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||||||||||||||||||||||||||||| ||||    
T  29332315 cattatcccttatcaagtgagttaagctcatggggac 29332279  T

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Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 31 - 81
Target Start/End: Complemental strand, 38491095 - 38491045
Alignment:
Q  31 ccgatctctgtataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    |||| ||||| |||||||||||||| ||  |||||||||||||||||||||    
T  38491095 ccgacctctgcataaattatgcattgtctgttatcaagtgagttaagctca 38491045  T

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Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 48 - 81
Target Start/End: Original strand, 1862901 - 1862934
Alignment:
Q  48 tatgcattatcccttatcaagtgagttaagctca 81  Q
    ||||||||||||||||||||||||| ||||||||    
T  1862901 tatgcattatcccttatcaagtgagctaagctca 1862934  T

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Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 88
Target Start/End: Complemental strand, 8893926 - 8893853
Alignment:
Q  15 gtttggagttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||| ||||||| ||||| | ||||| | ||| |||||||||||||| ||| |||  |||||||||||||||    
T  8893926 gtttggggttcgaaccccgacccctgtacatattgtgcattatcccttaccaaatgaactaagctcatgtggac 8893853  T

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Target: chr1; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 14262757 - 14262818
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatg 83  Q
    ||||||| ||||| | ||| ||| ||| |||||||||||||||||| |||||||| ||||||    
T  14262757 gttcgaaccccgacccctgcatatattgtgcattatcccttatcaaatgagttaatctcatg 14262818  T

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Target: chr3 (Bit Score: 36; Significance: 0.00000000003; HSPs: 7)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 54457192 - 54457153
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    ||||||||||||||||| ||||||||||||||||||||||    
T  54457192 ataaattatgcattatctcttatcaagtgagttaagctca 54457153  T

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Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 41 - 82
Target Start/End: Original strand, 11661219 - 11661260
Alignment:
Q  41 tataaattatgcattatcccttatcaagtgagttaagctcat 82  Q
    |||||||||||||||||||||||||||||||| ||| |||||    
T  11661219 tataaattatgcattatcccttatcaagtgagctaaactcat 11661260  T

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Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 166827 - 166788
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    |||||||||||||||||||||| |||||||| ||||||||    
T  166827 ataaattatgcattatcccttaccaagtgagctaagctca 166788  T

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Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 42 - 72
Target Start/End: Original strand, 37756469 - 37756499
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgag 72  Q
    |||||||||||||||||||||||||||||||    
T  37756469 ataaattatgcattatcccttatcaagtgag 37756499  T

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Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Original strand, 1325368 - 1325409
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatccctta 63  Q
    ||||||||||||||| ||||||| ||| ||||||||||||||    
T  1325368 gttcgaatcccgatccctgtatatattgtgcattatccctta 1325409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 88
Target Start/End: Complemental strand, 50381772 - 50381707
Alignment:
Q  23 ttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||| ||||| | ||| ||| ||| |||||||||||||| ||| ||||||||||||||| ||||    
T  50381772 ttcgaaccccgacccctgcatatattgtgcattatcccttaccaaatgagttaagctcatggggac 50381707  T

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Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 41 - 81
Target Start/End: Original strand, 23651125 - 23651165
Alignment:
Q  41 tataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    |||| ||||||||||||| |||||||| |||||||||||||    
T  23651125 tatatattatgcattatctcttatcaaatgagttaagctca 23651165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 33; Significance: 0.000000002; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 1984247 - 1984291
Alignment:
Q  44 aaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||| |||||||||||||| ||| ||||||||||||||||||||    
T  1984247 aaattgtgcattatcccttaccaaatgagttaagctcatgtggac 1984291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 42 - 81
Target Start/End: Complemental strand, 3294122 - 3294083
Alignment:
Q  42 ataaattatgcattatcccttatcaagtgagttaagctca 81  Q
    |||||||||||||||||||||| ||||| |||||||||||    
T  3294122 ataaattatgcattatcccttaacaagtaagttaagctca 3294083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 81
Target Start/End: Complemental strand, 38435946 - 38435917
Alignment:
Q  52 cattatcccttatcaagtgagttaagctca 81  Q
    ||||||||||||||||||||||||||||||    
T  38435946 cattatcccttatcaagtgagttaagctca 38435917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 82
Target Start/End: Complemental strand, 17077420 - 17077360
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcat 82  Q
    ||||||||||||| | ||| | ||||| |||||||||||||| ||| |||| |||||||||    
T  17077420 gttcgaatcccgacccctgcacaaattgtgcattatcccttaccaaatgagctaagctcat 17077360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 81
Target Start/End: Complemental strand, 20191474 - 20191442
Alignment:
Q  49 atgcattatcccttatcaagtgagttaagctca 81  Q
    ||||||||||||||| |||||||||||||||||    
T  20191474 atgcattatcccttaccaagtgagttaagctca 20191442  T

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Target: chr8 (Bit Score: 32; Significance: 0.000000006; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 44 - 83
Target Start/End: Complemental strand, 22652720 - 22652681
Alignment:
Q  44 aaattatgcattatcccttatcaagtgagttaagctcatg 83  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  22652720 aaattatgcattatcccttatcaaatgagctaagctcatg 22652681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 83
Target Start/End: Original strand, 10621438 - 10621472
Alignment:
Q  49 atgcattatcccttatcaagtgagttaagctcatg 83  Q
    |||||||||||||||||||||||| ||||||||||    
T  10621438 atgcattatcccttatcaagtgagctaagctcatg 10621472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 46 - 88
Target Start/End: Complemental strand, 40444740 - 40444698
Alignment:
Q  46 attatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||||||||||||||| |||||||| |||||||| ||||||    
T  40444740 attatgcattatcccttaccaagtgagctaagctcacgtggac 40444698  T

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Target: chr6 (Bit Score: 32; Significance: 0.000000006; HSPs: 4)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 78
Target Start/End: Original strand, 5641723 - 5641781
Alignment:
Q  19 ggagttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagc 78  Q
    |||||||||| |||| || ||| |||||||||||||||||| ||| ||||||||||||||    
T  5641723 ggagttcgaaccccggtc-ctgcataaattatgcattatccattaccaagtgagttaagc 5641781  T

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Target: chr6; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 33 - 84
Target Start/End: Original strand, 7927116 - 7927167
Alignment:
Q  33 gatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgt 84  Q
    ||||| || ||| ||||| |||||||||||| ||||||||||||||||||||    
T  7927116 gatctttgcatatattatacattatcccttaccaagtgagttaagctcatgt 7927167  T

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Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 35 - 82
Target Start/End: Original strand, 7929123 - 7929170
Alignment:
Q  35 tctctgtataaattatgcattatcccttatcaagtgagttaagctcat 82  Q
    |||||| ||| |||||| |||||||||||||||||||||||| |||||    
T  7929123 tctctgcatatattatgtattatcccttatcaagtgagttaaactcat 7929170  T

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Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 46 - 83
Target Start/End: Original strand, 1128479 - 1128516
Alignment:
Q  46 attatgcattatcccttatcaagtgagttaagctcatg 83  Q
    |||||||||||||||||||||| ||||||||| |||||    
T  1128479 attatgcattatcccttatcaaatgagttaaggtcatg 1128516  T

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Target: chr4 (Bit Score: 31; Significance: 0.00000002; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 88
Target Start/End: Original strand, 55308072 - 55308137
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    |||||||||| |||| ||| |||||||||||||||||| ||| ||| ||||||||| ||||| ||||    
T  55308072 gttcgaatcctgatccctgcataaattatgcattatcctttaccaa-tgagttaagttcatggggac 55308137  T

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Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Complemental strand, 38690725 - 38690664
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatg 83  Q
    ||||||| ||||| | ||| ||| | |||||||||||||||| |||||||| ||||||||||    
T  38690725 gttcgaaccccgacccctgcatataatatgcattatcccttaccaagtgagctaagctcatg 38690664  T

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Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 83
Target Start/End: Original strand, 45847962 - 45848023
Alignment:
Q  22 gttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatg 83  Q
    ||||||| ||||||| ||| | | |||||||||||||||||||||| |||| |||| |||||    
T  45847962 gttcgaaccccgatccctgcacatattatgcattatcccttatcaaatgagataagttcatg 45848023  T

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Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 88
Target Start/End: Original strand, 27862889 - 27862933
Alignment:
Q  44 aaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||| |||||||||||||||||| |||| |||||||||| ||||    
T  27862889 aaattgtgcattatcccttatcaaatgagctaagctcatggggac 27862933  T

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Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 79
Target Start/End: Original strand, 33993656 - 33993712
Alignment:
Q  23 ttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagct 79  Q
    |||||||||||| | ||| |||  ||||| |||||||||||||||||||| ||||||    
T  33993656 ttcgaatcccgacccctgcatatgttatgtattatcccttatcaagtgagctaagct 33993712  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 88
Target Start/End: Original strand, 12183767 - 12183837
Alignment:
Q  18 tggagttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||||||||||||||| | ||| ||| || ||||||||| ||||| |||||||| |||| ||||| ||||    
T  12183767 tggagttcgaatcccgacccctgcatacataatgcattattccttaccaagtgaggtaagttcatggggac 12183837  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 25553179 - 25553247
Alignment:
Q  20 gagttcgaatcccgatctctgtataaattatgcattatcccttatcaagtgagttaagctcatgtggac 88  Q
    ||||||||| ||| ||||||| | | ||| |||||||||||||| ||| ||| ||||||||||| ||||    
T  25553179 gagttcgaaccccaatctctgcacatattgtgcattatcccttaccaaatgaattaagctcatggggac 25553247  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 46 - 82
Target Start/End: Original strand, 30856577 - 30856613
Alignment:
Q  46 attatgcattatcccttatcaagtgagttaagctcat 82  Q
    |||||||||||||||||||||| |||||||| |||||    
T  30856577 attatgcattatcccttatcaattgagttaatctcat 30856613  T

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