View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_low_66 (Length: 263)
Name: NF8503_low_66
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_low_66 |
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| [»] chr4 (1 HSPs) |
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Alignment Details
Target: chr4 (Bit Score: 191; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 37 - 263
Target Start/End: Complemental strand, 404531 - 404305
Alignment:
| Q |
37 |
aacggaacaacgttagaagcagcttctatataagcacctgaattcgttattccaacaacttgtataagcgaatgttctaggggaaccgaaggcagaatcg |
136 |
Q |
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| T |
404531 |
aacggaacaacattagaagcagcttctatataagcacctgaatttgttatccctacaacttgtataagcgaatgttcaagcggaacagaaggtagaatcg |
404432 |
T |
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| Q |
137 |
tgattccattacgtggattatcatatagaaaatgacctacataaggtaagtgatgtgccactggaattccccatgaagaaagataaggtctaggtccaat |
236 |
Q |
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| T |
404431 |
tgattccattacgtggattatcatatagaaaatgacctacataaggtaaatgatgtgccactggaattccccatgaagaaagataaggtctaggtccaat |
404332 |
T |
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| Q |
237 |
tccactgagaagaagaagctgtggact |
263 |
Q |
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||||||||||||||||||||||||||| |
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| T |
404331 |
tccactgagaagaagaagctgtggact |
404305 |
T |
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