View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8503_low_81 (Length: 234)
Name: NF8503_low_81
Description: NF8503
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8503_low_81 |
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Alignment Details
Target: chr8 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 223
Target Start/End: Original strand, 10562328 - 10562550
Alignment:
| Q |
1 |
tcctttgatgttgtaaggttgtaccttgactcttcagttatacctttgatatctatggagcttgtggaagttacttcacatttatatggtgcaacctgtt |
100 |
Q |
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| T |
10562328 |
tcctttgatgttgcaaggttgtaccttgactcttcagttatacctttgatatctatggagcttgtggaagttacttcacatttatatggtgcaacctgtt |
10562427 |
T |
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| Q |
101 |
taaagtaaataacacatgcatcattttgtaacagctccaaaggattacaaaacacgttgaacataaaaattgtctagaacgatcagtgaacaaaagaaat |
200 |
Q |
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||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10562428 |
taaagcaaataacacatgcatcattttgtaacagctccaaaggattacaaaacacgttgaacataaaaattgtctagaacgatcagtgaacaaaagaaat |
10562527 |
T |
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| Q |
201 |
ccatgatgactaaggctttgttt |
223 |
Q |
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||||||||||||||||||||||| |
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| T |
10562528 |
ccatgatgactaaggctttgttt |
10562550 |
T |
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