View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8505_low_29 (Length: 257)
Name: NF8505_low_29
Description: NF8505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8505_low_29 |
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Alignment Details
Target: chr7 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 11 - 239
Target Start/End: Original strand, 48669249 - 48669477
Alignment:
| Q |
11 |
agcagagaaagagatgaatttgcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatca |
110 |
Q |
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| T |
48669249 |
agcaaagaaagagatgaatttgcgaacaagaatggaaacgaggatgacccatctccaactccaattgcaatcaacagatgaagatgaagaatggtcatca |
48669348 |
T |
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| Q |
111 |
tcatcgacaaagcggtgaaagtcacgaccaagaaaagcataacggaataattctacaaaaccacccttctcaggacgcacaatcagatacctcctccact |
210 |
Q |
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| T |
48669349 |
tcatcgacaaagcggtcaaagtcacgaccaagaaaagcataacggaataactctacaaaaccacccttctcaggacgcacaatcagatacctcctccact |
48669448 |
T |
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| Q |
211 |
ccgaatccatcacttcacatgcaaatggt |
239 |
Q |
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| T |
48669449 |
ccgaatccatcacttcacatgcaaatggt |
48669477 |
T |
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