View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF8505_low_31 (Length: 242)

Name: NF8505_low_31
Description: NF8505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF8505_low_31
NF8505_low_31
[»] chr8 (9 HSPs)
chr8 (105-229)||(25746776-25746900)
chr8 (87-229)||(15017922-15018062)
chr8 (115-229)||(22070886-22071002)
chr8 (132-229)||(11342633-11342730)
chr8 (138-229)||(21965424-21965515)
chr8 (132-184)||(12480153-12480205)
chr8 (132-184)||(23079186-23079238)
chr8 (106-193)||(28503963-28504055)
chr8 (132-184)||(19698473-19698526)
[»] chr5 (27 HSPs)
chr5 (87-229)||(37294855-37295000)
chr5 (87-229)||(21501076-21501216)
chr5 (87-229)||(19863916-19864056)
chr5 (134-220)||(20580219-20580306)
chr5 (132-217)||(23887592-23887677)
chr5 (132-213)||(23902235-23902316)
chr5 (132-217)||(7816014-7816099)
chr5 (132-217)||(24947483-24947568)
chr5 (132-217)||(24980348-24980433)
chr5 (134-229)||(22898874-22898969)
chr5 (134-220)||(30465823-30465909)
chr5 (104-220)||(25195444-25195562)
chr5 (104-220)||(25210806-25210924)
chr5 (104-220)||(25274958-25275076)
chr5 (134-220)||(22268953-22269039)
chr5 (134-220)||(27285767-27285853)
chr5 (132-184)||(16682569-16682621)
chr5 (134-217)||(24671979-24672064)
chr5 (134-217)||(24741749-24741834)
chr5 (134-217)||(24754518-24754603)
chr5 (134-217)||(24612353-24612438)
chr5 (134-217)||(24708755-24708840)
chr5 (106-217)||(28898476-28898591)
chr5 (106-217)||(28934871-28934986)
chr5 (132-184)||(570951-571003)
chr5 (132-184)||(15494616-15494668)
chr5 (132-184)||(32449605-32449658)
[»] chr6 (24 HSPs)
chr6 (87-229)||(924145-924285)
chr6 (87-229)||(8765262-8765407)
chr6 (105-227)||(20424405-20424525)
chr6 (134-220)||(17086819-17086905)
chr6 (134-220)||(25179418-25179504)
chr6 (106-220)||(4112774-4112895)
chr6 (132-217)||(21792784-21792869)
chr6 (132-217)||(22254220-22254305)
chr6 (128-217)||(17029222-17029314)
chr6 (106-217)||(12963931-12964046)
chr6 (134-220)||(20156143-20156228)
chr6 (134-220)||(22176604-22176689)
chr6 (133-207)||(16767739-16767816)
chr6 (134-192)||(24376640-24376700)
chr6 (106-193)||(14854492-14854584)
chr6 (155-217)||(28197270-28197331)
chr6 (135-215)||(30720828-30720908)
chr6 (132-184)||(31541446-31541498)
chr6 (138-193)||(20134429-20134486)
chr6 (138-193)||(22198383-22198440)
chr6 (145-193)||(12048309-12048358)
chr6 (151-184)||(22923923-22923956)
chr6 (151-184)||(22939635-22939668)
chr6 (151-184)||(23862080-23862113)
[»] chr4 (31 HSPs)
chr4 (87-229)||(18465264-18465404)
chr4 (138-229)||(15376285-15376376)
chr4 (138-229)||(15396109-15396200)
chr4 (132-229)||(16281031-16281128)
chr4 (132-229)||(20757187-20757284)
chr4 (110-229)||(46660067-46660189)
chr4 (88-220)||(15387102-15387235)
chr4 (115-229)||(15269198-15269315)
chr4 (132-229)||(15299541-15299638)
chr4 (138-229)||(15400022-15400111)
chr4 (134-229)||(1662846-1662941)
chr4 (132-217)||(5200026-5200111)
chr4 (132-217)||(18043877-18043962)
chr4 (134-217)||(1895662-1895745)
chr4 (134-229)||(17086935-17087030)
chr4 (134-220)||(12785487-12785573)
chr4 (134-220)||(16245097-16245183)
chr4 (134-217)||(22727610-22727693)
chr4 (134-192)||(26407042-26407101)
chr4 (134-192)||(1910470-1910529)
chr4 (136-220)||(15219403-15219488)
chr4 (136-220)||(17241580-17241665)
chr4 (148-223)||(26461471-26461545)
chr4 (132-184)||(18027841-18027893)
chr4 (162-229)||(24582024-24582092)
chr4 (162-229)||(24596852-24596920)
chr4 (136-193)||(15238159-15238218)
chr4 (132-184)||(40562908-40562960)
chr4 (134-216)||(17094902-17094986)
chr4 (145-193)||(14240125-14240174)
chr4 (132-184)||(9247903-9247955)
[»] chr3 (28 HSPs)
chr3 (87-229)||(16614975-16615115)
chr3 (87-229)||(22051745-22051885)
chr3 (87-229)||(29942467-29942607)
chr3 (87-229)||(29991621-29991761)
chr3 (105-229)||(10929951-10930073)
chr3 (105-229)||(15476010-15476132)
chr3 (132-229)||(36131485-36131582)
chr3 (132-222)||(15371423-15371513)
chr3 (134-229)||(4653988-4654083)
chr3 (132-217)||(15897548-15897633)
chr3 (109-220)||(1985814-1985927)
chr3 (134-220)||(14141854-14141940)
chr3 (134-217)||(11647117-11647201)
chr3 (135-220)||(23011926-23012011)
chr3 (132-217)||(15882369-15882454)
chr3 (128-218)||(15364181-15364277)
chr3 (134-215)||(19704785-19704866)
chr3 (134-220)||(18525719-18525806)
chr3 (155-217)||(19627943-19628004)
chr3 (128-193)||(28166188-28166255)
chr3 (154-217)||(17787704-17787766)
chr3 (154-217)||(19089225-19089287)
chr3 (132-184)||(18046589-18046642)
chr3 (132-184)||(18062652-18062705)
chr3 (132-184)||(34799771-34799824)
chr3 (134-229)||(5204855-5204950)
chr3 (134-229)||(22377206-22377301)
chr3 (134-229)||(22392140-22392235)
[»] chr1 (19 HSPs)
chr1 (87-229)||(16230524-16230664)
chr1 (88-229)||(20456423-20456567)
chr1 (88-229)||(20541671-20541815)
chr1 (138-229)||(15434096-15434187)
chr1 (110-229)||(15816410-15816532)
chr1 (132-217)||(5137655-5137740)
chr1 (132-217)||(26797995-26798080)
chr1 (132-217)||(4147500-4147585)
chr1 (132-217)||(21887066-21887151)
chr1 (134-217)||(20329889-20329974)
chr1 (134-217)||(20343433-20343518)
chr1 (134-217)||(16405648-16405732)
chr1 (134-220)||(16197755-16197843)
chr1 (134-220)||(16212764-16212852)
chr1 (161-229)||(37884834-37884903)
chr1 (136-220)||(31447702-31447787)
chr1 (106-217)||(16663314-16663429)
chr1 (154-193)||(9193007-9193046)
chr1 (132-184)||(24654746-24654797)
[»] chr2 (18 HSPs)
chr2 (105-229)||(22699921-22700048)
chr2 (110-229)||(27388345-27388467)
chr2 (132-229)||(19446372-19446469)
chr2 (132-229)||(19461181-19461278)
chr2 (110-229)||(27399406-27399528)
chr2 (138-229)||(19559893-19559984)
chr2 (111-217)||(17260054-17260165)
chr2 (134-220)||(21693175-21693261)
chr2 (134-220)||(21707957-21708043)
chr2 (110-217)||(18085607-18085717)
chr2 (132-184)||(13064985-13065037)
chr2 (132-184)||(37870477-37870529)
chr2 (155-217)||(10115637-10115698)
chr2 (132-184)||(20831461-20831513)
chr2 (132-184)||(24045189-24045241)
chr2 (132-184)||(17632411-17632464)
chr2 (132-184)||(27424247-27424299)
chr2 (132-184)||(27439291-27439343)
[»] scaffold0211 (1 HSPs)
scaffold0211 (105-229)||(11141-11263)
[»] scaffold0109 (2 HSPs)
scaffold0109 (110-229)||(16925-17047)
scaffold0109 (110-229)||(31169-31291)
[»] scaffold0174 (1 HSPs)
scaffold0174 (138-229)||(8276-8367)
[»] scaffold0389 (1 HSPs)
scaffold0389 (109-217)||(15423-15529)
[»] chr7 (27 HSPs)
chr7 (132-229)||(15004807-15004904)
chr7 (132-229)||(10851743-10851840)
chr7 (132-229)||(13895360-13895457)
chr7 (134-229)||(16439698-16439793)
chr7 (134-229)||(16454599-16454694)
chr7 (132-217)||(16498698-16498783)
chr7 (132-217)||(16507993-16508078)
chr7 (132-217)||(16523109-16523194)
chr7 (128-218)||(23765027-23765120)
chr7 (132-217)||(48217073-48217158)
chr7 (132-217)||(4055222-4055307)
chr7 (134-217)||(30241785-30241868)
chr7 (136-220)||(7369165-7369250)
chr7 (106-217)||(34194381-34194496)
chr7 (106-215)||(34196224-34196337)
chr7 (132-184)||(35971861-35971913)
chr7 (132-184)||(35993273-35993325)
chr7 (155-217)||(16036716-16036777)
chr7 (155-217)||(16051443-16051504)
chr7 (132-184)||(14930041-14930093)
chr7 (132-184)||(18623053-18623105)
chr7 (159-220)||(15854060-15854120)
chr7 (145-192)||(10839496-10839544)
chr7 (132-184)||(18459755-18459807)
chr7 (132-184)||(15353486-15353539)
chr7 (134-229)||(5168828-5168923)
chr7 (132-184)||(18626909-18626961)
[»] scaffold0954 (1 HSPs)
scaffold0954 (134-229)||(2706-2801)
[»] scaffold0609 (1 HSPs)
scaffold0609 (109-220)||(1593-1706)
[»] scaffold0089 (2 HSPs)
scaffold0089 (132-217)||(25164-25249)
scaffold0089 (132-184)||(51831-51884)
[»] scaffold0092 (1 HSPs)
scaffold0092 (134-220)||(17340-17426)
[»] scaffold0231 (1 HSPs)
scaffold0231 (132-217)||(26456-26541)
[»] scaffold0184 (1 HSPs)
scaffold0184 (134-220)||(22550-22636)
[»] scaffold0078 (1 HSPs)
scaffold0078 (134-220)||(50208-50294)
[»] scaffold0055 (1 HSPs)
scaffold0055 (134-216)||(7524-7606)
[»] scaffold0052 (1 HSPs)
scaffold0052 (134-216)||(76929-77011)
[»] scaffold0322 (1 HSPs)
scaffold0322 (128-217)||(17398-17490)
[»] scaffold0260 (1 HSPs)
scaffold0260 (134-217)||(5756-5841)
[»] scaffold0021 (2 HSPs)
scaffold0021 (134-220)||(99092-99180)
scaffold0021 (134-220)||(180015-180103)
[»] scaffold0355 (1 HSPs)
scaffold0355 (132-184)||(18178-18230)
[»] scaffold0206 (1 HSPs)
scaffold0206 (134-192)||(12445-12504)
[»] scaffold0393 (1 HSPs)
scaffold0393 (106-217)||(6962-7077)
[»] scaffold0099 (1 HSPs)
scaffold0099 (132-217)||(194-282)
[»] scaffold1704 (1 HSPs)
scaffold1704 (132-184)||(725-777)
[»] scaffold0134 (1 HSPs)
scaffold0134 (129-218)||(23280-23375)
[»] scaffold0031 (1 HSPs)
scaffold0031 (145-193)||(125932-125981)
[»] scaffold1665 (1 HSPs)
scaffold1665 (134-184)||(169-221)
[»] scaffold0143 (1 HSPs)
scaffold0143 (145-192)||(22661-22709)


Alignment Details
Target: chr8 (Bit Score: 121; Significance: 4e-62; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 25746776 - 25746900
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 204  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25746776 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 25746875  T
Q  205 gacactggactctctataatgatgt 229  Q
    |||| ||||||||||||||||||||    
T  25746876 gacaatggactctctataatgatgt 25746900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 15017922 - 15018062
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  15017922 agtttagccactttaccttttcaatttctatgtcaaatggacatgtacttttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 15018021  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  15018022 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 15018062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 22071002 - 22070886
Alignment:
Q  115 tatgtcaaatggacatgtaat--tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactgg 212  Q
    ||||| || ||||||||||||  | ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||    
T  22071002 tatgttaagtggacatgtaatagtctaggtagtttaatttccttttaatttcttacaagaccatagcatgtaaactagggcaaagtgtaaaggacaatgg 22070903  T
Q  213 actctctataatgatgt 229  Q
    |||||||||||||||||    
T  22070902 actctctataatgatgt 22070886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 11342730 - 11342633
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  11342730 taattctaggtagtttaatttccttttaatttattgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 11342633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 21965424 - 21965515
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  21965424 taggtagtttagtttccttttaatttcttgcaagaccatatcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 21965515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 12480205 - 12480153
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  12480205 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 12480153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 23079186 - 23079238
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  23079186 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 23079238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Complemental strand, 28504055 - 28503963
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| ||||||||||||||    
T  28504055 ttcaatttctatgttaaagttggcatgtaagtttaggtagtttcaatttctcttttttaatttcttgcaagaccatagtatgtaaactagggc 28503963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 19698473 - 19698526
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  19698473 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 19698526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 116; Significance: 4e-59; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 37295000 - 37294855
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 183  Q
    |||||| ||||||| ||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||    
T  37295000 agtttaaccactttaccttttcaatttctatgtcaaatggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 37294901  T
Q  184 aaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||    
T  37294900 aaactagggcaaagtgtaaaggacaatggactctctataatgatgt 37294855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 21501076 - 21501216
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  21501076 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 21501175  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  21501176 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 21501216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 19864056 - 19863916
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  | ||| |||||||||||||||||||    
T  19864056 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttatatccttacaagaccatagcatgtaaa 19863957  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||| |||||  ||||||||||| ||||||||||||| ||||||    
T  19863956 ctatggcaa--tgtaaaggacaatggactctctatagtgatgt 19863916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 20580306 - 20580219
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||    
T  20580306 attttaggtagtttaaattcccttttaatttcttgcaagaccatagcatgtaaactaggacaaagtgtaaaggacaatggactctcta 20580219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 23887592 - 23887677
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||    
T  23887592 taattttaggtagattagtttccttttgatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactct 23887677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 132 - 213
Target Start/End: Original strand, 23902235 - 23902316
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactgga 213  Q
    ||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| ||||    
T  23902235 taattttaggtagattagtttccttttgatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatgga 23902316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 7816014 - 7816099
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  7816014 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 7816099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 24947483 - 24947568
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24947483 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 24947568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 24980348 - 24980433
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  24980348 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 24980433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 22898874 - 22898969
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||| ||||||| ||||||| ||||| ||| ||||||||||| ||||||||||||| ||||||    
T  22898874 attttaggtagtttaaatttccttttaatttcttgcaaaaccatagaatgtaaattaggg-aaaatgtaaaggacaatggactctctatagtgatgt 22898969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 30465909 - 30465823
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  30465909 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 30465823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 25195444 - 25195562
Alignment:
Q  104 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25195444 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25195542  T
Q  201 aaaggacactggactctcta 220  Q
    || ||||| |||||||||||    
T  25195543 aacggacaatggactctcta 25195562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 25210806 - 25210924
Alignment:
Q  104 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25210806 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25210904  T
Q  201 aaaggacactggactctcta 220  Q
    || ||||| |||||||||||    
T  25210905 aatggacaatggactctcta 25210924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 104 - 220
Target Start/End: Original strand, 25274958 - 25275076
Alignment:
Q  104 ttttcaatttctatgtcaaatggacatgtaat--tttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||| ||||||||||| |||  | ||||||||  |||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || |||    
T  25274958 tttttaatttctatgttaaaatgtcatgtaatattttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 25275056  T
Q  201 aaaggacactggactctcta 220  Q
    || ||||| |||||||||||    
T  25275057 aatggacaatggactctcta 25275076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 22269039 - 22268953
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||| || ||||| ||||| |||||||||||    
T  22269039 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggccaa-tgtaacggacaatggactctcta 22268953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 27285853 - 27285767
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  27285853 attttaggtagtttaaatttccttttattttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 27285767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 16682569 - 16682621
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  16682569 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 16682621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 24672064 - 24671979
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24672064 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24671979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 24741834 - 24741749
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24741834 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24741749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 24754603 - 24754518
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24754603 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24754518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 24612438 - 24612353
Alignment:
Q  134 attttaggtagttt-aatttc-ctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24612438 attttaggtagtttcaatttctcttttcaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24612353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 24708840 - 24708755
Alignment:
Q  134 attttaggtagttt-aatttc-ctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||| |||||| ||||| |||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  24708840 attttaggtagtttcaatttctcttttnaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 24708755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 28898591 - 28898476
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  28898591 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 28898493  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  28898492 aacggacaatggactct 28898476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 28934986 - 28934871
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  28934986 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 28934888  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  28934887 aacggacaatggactct 28934871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 571003 - 570951
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  571003 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 570951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 15494616 - 15494668
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || ||||||||||  ||||||||||||||||||||    
T  15494616 taattttaggtagattagttcccttttaattctttgcaagaccatagcatgta 15494668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 32449658 - 32449605
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  32449658 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 32449605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 112; Significance: 1e-56; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 924145 - 924285
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  924145 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 924244  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  924245 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 924285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 8765262 - 8765407
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 183  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||   | ||||||||||||||||||||||||||||||||||||||||||||||    
T  8765262 agttaagccactttaccttttcaatttctatgtcaaatggacatgtaataattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgt 8765361  T
Q  184 aaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||| ||||||||||||| ||||||    
T  8765362 aaactagggcaaagtgtaaaggacaatggactctctatagtgatgt 8765407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 105 - 227
Target Start/End: Original strand, 20424405 - 20424525
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  20424405 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 20424502  T
Q  205 gacactggactctctataatgat 227  Q
    ||||  ||||||| |||| ||||    
T  20424503 gacaacggactctttatagtgat 20424525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 17086905 - 17086819
Alignment:
Q  134 attttaggtagttt-aatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| |||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  17086905 attttaggtagtttcaatttccttttaatttcttgtaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 17086819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 25179418 - 25179504
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  25179418 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 25179504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 106 - 220
Target Start/End: Complemental strand, 4112895 - 4112774
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagtttaatttcctttt-------aatttcttgcaagaccatagcatgtaaactagggcaaag 197  Q
    |||||||||||||| ||| | | |||||||||||||||||||||||||||||||       |||||||||||||||||||| |||||||||||||| ||     
T  4112895 ttcaatttctatgttaaagttggcatgtaattttaggtagtttaatttcctttttttttttaatttcttgcaagaccatagaatgtaaactagggccaa- 4112797  T
Q  198 tgtaaaggacactggactctcta 220  Q
    ||||| ||||| |||||||||||    
T  4112796 tgtaacggacaatggactctcta 4112774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 21792784 - 21792869
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| |||| |||||||||||||||||||||||| ||||||||    
T  21792784 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtgaactagggcaaagtgtaaaggacaatggactct 21792869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 22254305 - 22254220
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| |||||||||| |||||||||||||||||| ||||||||    
T  22254305 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactaaggcaaagtgtaaaggacaatggactct 22254220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Complemental strand, 17029314 - 17029222
Alignment:
Q  128 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||| |||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  17029314 catgtaattctaggtagtttaatttccccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 17029222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 12964046 - 12963931
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  12964046 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 12963948  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  12963947 aacggacaatggactct 12963931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 20156143 - 20156228
Alignment:
Q  134 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||||||    
T  20156143 attttaggtagttttaatttcttttaaattcttgcaagaccatagaatgtaaactagggccta-tgtaacggacaatggactctcta 20156228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 22176689 - 22176604
Alignment:
Q  134 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| | || ||||||| ||||||||||||||||| ||||||||||||||  | ||||| ||||| |||||||||||    
T  22176689 attttaggtagttttaatttcttttaaattcttgcaagaccatagaatgtaaactagggccta-tgtaacggacaatggactctcta 22176604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 207
Target Start/End: Complemental strand, 16767816 - 16767739
Alignment:
Q  133 aattttaggtagtttaa-tttcctttt---aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggac 207  Q
    ||||||||||||||||| |||||||||   |||||||||||||||||||| |||||||||||||| || ||||||||||    
T  16767816 aattttaggtagtttaaatttcctttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggac 16767739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 24376640 - 24376700
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgc-aagaccatagcatgtaaactaggg 192  Q
    |||||||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||    
T  24376640 attttaggtagtttaaatttccttttaatttcttgcaaagaccatagaatgtaaactaggg 24376700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 193
Target Start/End: Original strand, 14854492 - 14854584
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| ||||||||||||||    
T  14854492 ttcaatttctatgttaaagtcggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggc 14854584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 28197331 - 28197270
Alignment:
Q  155 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  28197331 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 28197270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 135 - 215
Target Start/End: Complemental strand, 30720908 - 30720828
Alignment:
Q  135 ttttaggtagtttaatttcct-tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggact 215  Q
    ||||||||||||||| |  || ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||    
T  30720908 ttttaggtagtttaaatcactctttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggact 30720828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 31541446 - 31541498
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  31541446 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 31541498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 193
Target Start/End: Original strand, 20134429 - 20134486
Alignment:
Q  138 taggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    |||||||||||||||  |||||||| | ||||||||||||||| ||||||||||||||    
T  20134429 taggtagtttaattttgccttttaaatccttgcaagaccatagaatgtaaactagggc 20134486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 138 - 193
Target Start/End: Complemental strand, 22198440 - 22198383
Alignment:
Q  138 taggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    |||||||||||||||  |||||||| | ||||||||||||||| ||||||||||||||    
T  22198440 taggtagtttaattttgccttttaaatccttgcaagaccatagaatgtaaactagggc 22198383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 12048358 - 12048309
Alignment:
Q  145 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  12048358 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 12048309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 22923956 - 22923923
Alignment:
Q  151 ttccttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||||| |||||||||||||||||||||    
T  22923956 ttccttttaattccttgcaagaccatagcatgta 22923923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 22939668 - 22939635
Alignment:
Q  151 ttccttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||||| |||||||||||||||||||||    
T  22939668 ttccttttaattccttgcaagaccatagcatgta 22939635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 151 - 184
Target Start/End: Complemental strand, 23862113 - 23862080
Alignment:
Q  151 ttccttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||||| |||||||||||||||||||||    
T  23862113 ttccttttaattccttgcaagaccatagcatgta 23862080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 112; Significance: 1e-56; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 18465404 - 18465264
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  18465404 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 18465305  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  18465304 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 18465264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 15376376 - 15376285
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15376376 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 15376285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 15396200 - 15396109
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15396200 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 15396109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 16281031 - 16281128
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  16281031 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 16281128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 20757187 - 20757284
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  20757187 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 20757284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 46660067 - 46660189
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||| ||||| || ||||||||||||   | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46660067 atttttatgttaagtggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 46660166  T
Q  207 cactggactctctataatgatgt 229  Q
    ||  |||||||||||||||||||    
T  46660167 caagggactctctataatgatgt 46660189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 88 - 220
Target Start/End: Original strand, 15387102 - 15387235
Alignment:
Q  88 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||||||  |||| ||||||||||||||||||||||||||||   ||||||||||||||||||||||||||||||||||||||||||| |||||    
T  15387102 gtttagccactttatcttt-caatttctatgtcaaatggacatgtaataattttaggtagtttaatttccttttaatttcttgcaagaccatagaatgta 15387200  T
Q  185 aactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||| || || ||||| ||||| |||||||||||    
T  15387201 aactagagccaa-tgtaacggacaatggactctcta 15387235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 115 - 229
Target Start/End: Complemental strand, 15269315 - 15269198
Alignment:
Q  115 tatgtcaaatggacatgtaat--ttta-ggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactg 211  Q
    |||||||| ||||||||||||  || | |||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||||||| ||    
T  15269315 tatgtcaagtggacatgtaataattcatggtagtttaatttccttttaatttcttgcaagacaatagcatgtaaattagggcaaagtgtaaaggacaatg 15269216  T
Q  212 gactctctataatgatgt 229  Q
     |||||||||||||||||    
T  15269215 tactctctataatgatgt 15269198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 15299638 - 15299541
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||||||||||||||||||||||||| |||||||||||||| ||||||| ||| ||||||||||||||||| ||||||||||||||||||||    
T  15299638 taattctaggtagtttaatttccttttaattttttgcaagaccataggatgtaaattagagcaaagtgtaaaggacaatggactctctataatgatgt 15299541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 15400111 - 15400022
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||  ||||||||||||||    
T  15400111 taggtagtttaatttccttttaattactagcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatgga--ctctataatgatgt 15400022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 1662846 - 1662941
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||| ||||||    
T  1662846 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctatagtgatgt 1662941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 5200111 - 5200026
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5200111 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 5200026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 18043877 - 18043962
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  18043877 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 18043962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 1895662 - 1895745
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| ||||||||    
T  1895662 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactct 1895745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 17086935 - 17087030
Alignment:
Q  134 attttaggtagtttaatt-tccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| | ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||| |||| ||||||    
T  17086935 attttaggtagtttaaatctccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctttatagtgatgt 17087030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 12785487 - 12785573
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  12785487 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 12785573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 16245183 - 16245097
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16245183 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16245097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 22727693 - 22727610
Alignment:
Q  134 attttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||| |||  || ||||||||| || |||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  22727693 attttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagagcaaagtgtaaaggacgatggactct 22727610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 192
Target Start/End: Complemental strand, 26407101 - 26407042
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 192  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||    
T  26407101 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactaggg 26407042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 1910470 - 1910529
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 192  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| |||||    
T  1910470 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattaggg 1910529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 15219403 - 15219488
Alignment:
Q  136 tttaggtagtttaatttc--cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||| | |||  ||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  15219403 tttaggtagttttaattcttcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 15219488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 17241580 - 17241665
Alignment:
Q  136 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||| | |||||  ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  17241580 tttaggtagttttaattcctcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 17241665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 223
Target Start/End: Complemental strand, 26461545 - 26461471
Alignment:
Q  148 aatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataa 223  Q
    |||| |||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||||    
T  26461545 aattcccttttaaattcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctataa 26461471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 18027893 - 18027841
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  18027893 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 18027841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 24582092 - 24582024
Alignment:
Q  162 ttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatgatgt 229  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| |||||||||    
T  24582092 ttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatgatgt 24582024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 229
Target Start/End: Complemental strand, 24596920 - 24596852
Alignment:
Q  162 ttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatgatgt 229  Q
    ||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| |||||||||    
T  24596920 ttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatgatgt 24596852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 136 - 193
Target Start/End: Original strand, 15238159 - 15238218
Alignment:
Q  136 tttaggtagtttaatttc--cttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    |||||||||||| | |||  ||||||||||||||||||||||||| ||||||||||||||    
T  15238159 tttaggtagttttaattcttcttttaatttcttgcaagaccatagaatgtaaactagggc 15238218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 40562908 - 40562960
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  40562908 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 40562960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 17094902 - 17094986
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 216  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||| | || ||||| ||||| |||||||    
T  17094902 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactaggaccaa-tgtaacggacaatggactc 17094986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Complemental strand, 14240174 - 14240125
Alignment:
Q  145 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  14240174 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 14240125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 9247955 - 9247903
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||| ||| ||| || | |||||||| |||||||||||||||||||||    
T  9247955 taattttagatagattagttcctttttaattccttgcaagaccatagcatgta 9247903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 1e-56; HSPs: 28)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Complemental strand, 16615115 - 16614975
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  16615115 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattctttacaagaccatagcatgtaaa 16615016  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  16615015 ctagggcaa--tgtaaaggacaatggactctctataatgatgt 16614975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 22051745 - 22051885
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  || |||||||||||||||||||    
T  22051745 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattctttacaagaccatagcatgtaaa 22051844  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||||||||||    
T  22051845 ctagggcaa--tgtaaaggacaatggactctctataatgatgt 22051885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 29942467 - 29942607
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  29942467 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 29942566  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  29942567 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 29942607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 29991621 - 29991761
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  29991621 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 29991720  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||  ||||||||||| ||||||||||||| ||||||    
T  29991721 ctagggcaa--tgtaaaggacaatggactctctatagtgatgt 29991761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 10930073 - 10929951
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  10930073 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 10929976  T
Q  205 gacactggactctctataatgatgt 229  Q
    |||| || |||||||||| ||||||    
T  10929975 gacaatgaactctctatagtgatgt 10929951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 15476132 - 15476010
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |||||  || |||||||    
T  15476132 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaaataggg--aaatgtaaag 15476035  T
Q  205 gacactggactctctataatgatgt 229  Q
    |||| |||||||| |||| ||||||    
T  15476034 gacaatggactctttatagtgatgt 15476010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 36131582 - 36131485
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  36131582 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 36131485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 132 - 222
Target Start/End: Original strand, 15371423 - 15371513
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctata 222  Q
    ||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  15371423 taattctaggtagtttaatttccttttagtttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctata 15371513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 4653988 - 4654083
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||  |||| ||||| ||||||||||||| ||||||    
T  4653988 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggcaaa-cgtaacggacaatggactctctatagtgatgt 4654083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 15897633 - 15897548
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  15897633 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 15897548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 1985927 - 1985814
Alignment:
Q  109 aatttctatgtcaaatggacatgtaat--tttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 205  Q
    |||||||||||||||  | ||||||||  |||||||||||||| |||| |||| ||||||||||||||||||| ||||||||||||||||| ||||| ||    
T  1985927 aatttctatgtcaaaatgtcatgtaatattttaggtagtttaaatttctttttgatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacgg 1985829  T
Q  206 acactggactctcta 220  Q
    ||| |||||||||||    
T  1985828 acaatggactctcta 1985814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 14141940 - 14141854
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  14141940 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 14141854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 11647201 - 11647117
Alignment:
Q  134 attttaggtagtttaattt--ccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||  |||||||||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  11647201 attttaggtagtttaattttcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 11647117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 135 - 220
Target Start/End: Complemental strand, 23012011 - 23011926
Alignment:
Q  135 ttttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  23012011 ttttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 23011926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 15882454 - 15882369
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  15882454 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactatggcaaagtgtaaaggacaatggactct 15882369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 15364277 - 15364181
Alignment:
Q  128 catgtaattttaggtagtttaatttcc-------ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 218  Q
    |||||||||||||||||||||||||||       |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||    
T  15364277 catgtaattttaggtagtttaatttcccttttttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctc 15364181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 215
Target Start/End: Original strand, 19704785 - 19704866
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggact 215  Q
    |||||||||||||||| |||| |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||    
T  19704785 attttaggtagtttaaattcccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggact 19704866  T

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Target: chr3; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 18525719 - 18525806
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttg-caagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| |||||||||||||| ||| ||||||||||| ||||||| ||||||||| ||||| ||||| |||||||||||    
T  18525719 attttaggtagtttaaatttccttttaattttttgtcaagaccatagaatgtaaattagggcaaa-tgtaacggacaatggactctcta 18525806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 19628004 - 19627943
Alignment:
Q  155 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  19628004 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 19627943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 128 - 193
Target Start/End: Complemental strand, 28166255 - 28166188
Alignment:
Q  128 catgtaattttaggtagtttaa--tttccttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    ||||||| |||||||||||| |  ||| ||||||| ||||||||||||||||| ||||||||||||||    
T  28166255 catgtaaatttaggtagtttcaatttttcttttaaattcttgcaagaccatagaatgtaaactagggc 28166188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 17787704 - 17787766
Alignment:
Q  154 cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||    
T  17787704 cttttaatttcttgcaagaccatagaatgtaaaccagggccaa-tgtaacggacaatggactct 17787766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 217
Target Start/End: Original strand, 19089225 - 19089287
Alignment:
Q  154 cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||||||||||||||| |||||||| ||||| || ||||| ||||| ||||||||    
T  19089225 cttttaatttcttgcaagaccatagaatgtaaacaagggccaa-tgtaacggacaatggactct 19089287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18046589 - 18046642
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  18046589 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 18046642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18062652 - 18062705
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  18062652 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 18062705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 34799824 - 34799771
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  34799824 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 34799771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 5204855 - 5204950
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||| ||||||| ||||| ||||||||| | |||||||||||| ||||| |||||| |||| ||||| ||||  |||||| ||| |||| ||||    
T  5204855 attttagatagtttagtttccattttaattt-tcgcaagaccatagaatgtatactaggacaaaatgtaacggactatggactatctctaataatgt 5204950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 22377301 - 22377206
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||| ||||||| ||||| ||||||||| | |||||||||||| ||||| |||||| |||| ||||| ||||  |||||| ||| |||| ||||    
T  22377301 attttagatagtttagtttccattttaattt-tcgcaagaccatagaatgtatactaggacaaaatgtaacggactatggactatctctaataatgt 22377206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 22392235 - 22392140
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||| ||||||| ||||| ||||||||| | |||||||||||| ||||| |||||| |||| ||||| ||||  |||||| ||| |||| ||||    
T  22392235 attttagatagtttagtttccattttaattt-tcgcaagaccatagaatgtatactaggacaaaatgtaacggactatggactatctctaataatgt 22392140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 108; Significance: 2e-54; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 87 - 229
Target Start/End: Original strand, 16230524 - 16230664
Alignment:
Q  87 agtttagccactttcccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaa 186  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||    
T  16230524 agtttagccactttaccttttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaa 16230623  T
Q  187 ctagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||  ||||||||||| ||||||||||||| ||||||    
T  16230624 ctaggacaa--tgtaaaggacaatggactctctatagtgatgt 16230664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 20456423 - 20456567
Alignment:
Q  88 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  20456423 gtttagccactttaccttttcaatttctatgtcaaatggacatgtaataattttaggtagcttaatttcctttaagtttcttgcaaggccatagcatgta 20456522  T
Q  185 aactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20456523 aactagggcaaagtgtaaaggacaatggactctctataatgatgt 20456567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 107; E-Value: 9e-54
Query Start/End: Original strand, 88 - 229
Target Start/End: Original strand, 20541671 - 20541815
Alignment:
Q  88 gtttagccactttcccttttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||   ||||||||| |||||||||||| | ||||||||||| ||||||||||||    
T  20541671 gtttagccactttaccttttcaatttctatgtcaaatggacatgtaataattttaggtagcttaatttcctttaagtttcttgcaaggccatagcatgta 20541770  T
Q  185 aactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||||||||||| ||||||||||||||||||||    
T  20541771 aactagggcaaagtgtaaaggacaatggactctctataatgatgt 20541815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 15434096 - 15434187
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  15434096 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 15434187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 229
Target Start/End: Complemental strand, 15816532 - 15816410
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||| ||||| |||||||||||||||   | ||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||||||||    
T  15816532 atttttatgttaaatggacatgtaataattctaggtagtttaatttccttttagcttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 15816433  T
Q  207 cactggactctctataatgatgt 229  Q
    || ||||||||||||||||||||    
T  15816432 caatggactctctataatgatgt 15816410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 5137655 - 5137740
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  5137655 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 5137740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 26797995 - 26798080
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  26797995 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 26798080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 4147585 - 4147500
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || | ||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  4147585 taattttaggtagattagctttcctttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 4147500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 21887151 - 21887066
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||| |||||||| |||  || |||||| || || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  21887151 taatcttaggtagattagctttcttttagttactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacagtggactct 21887066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 20329974 - 20329889
Alignment:
Q  134 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  20329974 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 20329889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 20343518 - 20343433
Alignment:
Q  134 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  20343518 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 20343433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 134 - 217
Target Start/End: Original strand, 16405648 - 16405732
Alignment:
Q  134 attttaggtagtttaa-tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||| ||||||| ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  16405648 attttagggagtttaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 16405732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 16197843 - 16197755
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16197843 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16197755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 16212852 - 16212764
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  16212852 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 16212764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 161 - 229
Target Start/End: Complemental strand, 37884903 - 37884834
Alignment:
Q  161 tttcttgcaagaccatagcatgtaaactagggcaaagtgt-aaaggacactggactctctataatgatgt 229  Q
    |||||||||||||| |||||||||||||||| |||||||| |||||||| |||||| ||| |||||||||    
T  37884903 tttcttgcaagaccttagcatgtaaactaggacaaagtgtaaaaggacaatggactatctctaatgatgt 37884834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 136 - 220
Target Start/End: Complemental strand, 31447787 - 31447702
Alignment:
Q  136 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||| | |||||  ||||||||||||||||| ||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  31447787 tttaggtagttttaattcctcttttaatttcttgcaagatcatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 31447702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 106 - 217
Target Start/End: Complemental strand, 16663429 - 16663314
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||  || |||    
T  16663429 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggtcaa-tgt 16663331  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  16663330 aacggacaatggactct 16663314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 154 - 193
Target Start/End: Complemental strand, 9193046 - 9193007
Alignment:
Q  154 cttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  9193046 cttttaatttcttgcaagaccatagaatgtaaactagggc 9193007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 24654746 - 24654797
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||| || ||| ||||||||||||| |||||||||||||||||||||    
T  24654746 taattttagg-agattagtttccttttaattccttgcaagaccatagcatgta 24654797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 94; Significance: 5e-46; HSPs: 18)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 105 - 229
Target Start/End: Original strand, 22699921 - 22700048
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgta 201  Q
    |||||||||||||||||||||||||||||||   | |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  22699921 tttcaatttctatgtcaaatggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccataacatgtaaactagggcaaagtgta 22700020  T
Q  202 aaggacactggactctctataatgatgt 229  Q
    ||||||| || |||||||| ||||||||    
T  22700021 aaggacaatgaactctctacaatgatgt 22700048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 27388345 - 27388467
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||||||||| || ||||||||||||   | ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27388345 atttctatgttaagtggacatgtaatagttctaggtagtttaatttccttttaatttcttgcaagaccatagtatgtaaactagggcaaagtgtaaagga 27388444  T
Q  207 cactggactctctataatgatgt 229  Q
    || ||||||||||||||||||||    
T  27388445 caatggactctctataatgatgt 27388467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 19446469 - 19446372
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19446469 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 19446372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 19461278 - 19461181
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  19461278 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 19461181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 27399406 - 27399528
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||||||||| || ||||||||||||   | |||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  27399406 atttctatgttaagtggacatgtaatagttctaggtagtttaatttcattttaatttcttgcaagaccatagtatgtaaactagggcaaagtgtaaagga 27399505  T
Q  207 cactggactctctataatgatgt 229  Q
    || ||||||||||||||||||||    
T  27399506 caatggactctctataatgatgt 27399528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 138 - 229
Target Start/End: Complemental strand, 19559984 - 19559893
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  19559984 taggtagtttaatttccttttaatttcttgcaagaccatatcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 19559893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 111 - 217
Target Start/End: Original strand, 17260054 - 17260165
Alignment:
Q  111 tttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 205  Q
    ||||||||||||| | ||||||||| |||||||||||| ||||||    |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  17260054 tttctatgtcaaaattgacatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaagg 17260153  T
Q  206 acactggactct 217  Q
    ||| ||||||||    
T  17260154 acaatggactct 17260165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 21693261 - 21693175
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  21693261 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctcta 21693175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 21708043 - 21707957
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| ||||||||||| |||||||||||    
T  21708043 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaatggactctcta 21707957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 110 - 217
Target Start/End: Original strand, 18085607 - 18085717
Alignment:
Q  110 atttctatgtcaaa-tggacatgtaattttaggtagttt-aatttc--cttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 205  Q
    |||||||||| ||| | ||||||||| |||||||||||| ||||||  ||||||||||||||||||||||||| |||||||||||||| || ||||| ||    
T  18085607 atttctatgttaaagttgacatgtaaatttaggtagtttcaatttctccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacgg 18085705  T
Q  206 acactggactct 217  Q
    ||| ||||||||    
T  18085706 acaatggactct 18085717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 13064985 - 13065037
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  13064985 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 13065037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 37870529 - 37870477
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  37870529 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 37870477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Complemental strand, 10115698 - 10115637
Alignment:
Q  155 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  10115698 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 10115637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 20831461 - 20831513
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  20831461 taattttaggtagattagtctccttttaattccttgcaagaccatagcatgta 20831513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 24045189 - 24045241
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||||||| |||||||||||||||||||||    
T  24045189 taattttaggtagattagttcccttttaattccttgcaagaccatagcatgta 24045241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 17632411 - 17632464
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  17632411 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 17632464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 27424299 - 27424247
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| | ||||||||||| ||||||||| |||| ||||||    
T  27424299 taattttaggtagattagtctccttttaattccttgcaagaacataccatgta 27424247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 27439343 - 27439291
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| | ||||||||||| ||||||||| |||| ||||||    
T  27439343 taattttaggtagattagtctccttttaattccttgcaagaacataccatgta 27439291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 105 - 229
Target Start/End: Complemental strand, 11263 - 11141
Alignment:
Q  105 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaag 204  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||  || |||||||    
T  11263 tttcaatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactaggg--aaatgtaaag 11166  T
Q  205 gacactggactctctataatgatgt 229  Q
    |||| |||||||| |||| ||||||    
T  11165 gacaatggactctttatagtgatgt 11141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109 (Bit Score: 89; Significance: 5e-43; HSPs: 2)
Name: scaffold0109
Description:

Target: scaffold0109; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 16925 - 17047
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||||||||| || ||||||||||||   | |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  16925 atttctatgttaagtggacatgtaatagttctaggtagtttaattcccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 17024  T
Q  207 cactggactctctataatgatgt 229  Q
    || ||||||||||||||||||||    
T  17025 caatggactctctataatgatgt 17047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0109; HSP #2
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 110 - 229
Target Start/End: Original strand, 31169 - 31291
Alignment:
Q  110 atttctatgtcaaatggacatgtaat---tttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagga 206  Q
    |||||||||| || ||||||||||||   | |||||||||||||| ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||    
T  31169 atttctatgttaagtggacatgtaatagttctaggtagtttaattcccttttaatttcttgcaagaccataacatgtaaactaaggcaaagtgtaaagga 31268  T
Q  207 cactggactctctataatgatgt 229  Q
    || ||||||||||||||||||||    
T  31269 caatggactctctataatgatgt 31291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0174 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0174
Description:

Target: scaffold0174; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 138 - 229
Target Start/End: Original strand, 8276 - 8367
Alignment:
Q  138 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  8276 taggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactctctataatgatgt 8367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0389 (Bit Score: 86; Significance: 3e-41; HSPs: 1)
Name: scaffold0389
Description:

Target: scaffold0389; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 15529 - 15423
Alignment:
Q  109 aatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggaca 208  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||  |||||||||||    
T  15529 aatttctatgtcaaatggacatgtaattttaggtagtttaatttccttttaattccttacaagaccatagcatgtaaactagggcaa--tgtaaaggaca 15432  T
Q  209 ctggactct 217  Q
     ||||||||    
T  15431 atggactct 15423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 86; Significance: 3e-41; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 15004904 - 15004807
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  15004904 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 15004807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 229
Target Start/End: Original strand, 10851743 - 10851840
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||    
T  10851743 taattctaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaatttgggcaaagtgtaaaggacaatggactctctataatgatgt 10851840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 132 - 229
Target Start/End: Complemental strand, 13895457 - 13895360
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||    
T  13895457 taattctaggtagtttaattaccttttaatttcttgcaagaccatagcatgtaaattagggcaaagtgtaaaggacaatggactctctataatgatgt 13895360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 16439793 - 16439698
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  |||||||||||| ||||||    
T  16439793 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaacggactctctatagtgatgt 16439698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Complemental strand, 16454694 - 16454599
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| ||||||| ||||||||| |||||||||||  |||||||||||| ||||||    
T  16454694 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaattagggcaaa-tgtaaaggacaacggactctctatagtgatgt 16454599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 16498783 - 16498698
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16498783 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16498698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 16508078 - 16507993
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16508078 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16507993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 16523194 - 16523109
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  16523194 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 16523109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 128 - 218
Target Start/End: Original strand, 23765027 - 23765120
Alignment:
Q  128 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 218  Q
    |||||||||||||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||    
T  23765027 catgtaattttaggtagtttaatttccctttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctc 23765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 48217073 - 48217158
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  48217073 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactagggcaaagtgtaaaggacaatggactct 48217158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 50; E-Value: 9e-20
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 4055222 - 4055307
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||||||||||||||| ||||||||||||||||  ||||||||    
T  4055222 taattttaggtagattagctttcttttaattactcgcaagaccatagcatgtaaactagtgcaaagtgtaaaggactatggactct 4055307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 30241868 - 30241785
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||| ||||||||||||||||||||||| ||||| ||||||| ||||||||| ||||| ||||| ||||||||    
T  30241868 attttaggtagtttaaatttccttttaatttcttgcaagatcatagaatgtaaattagggcaaa-tgtaacggacaatggactct 30241785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 136 - 220
Target Start/End: Original strand, 7369165 - 7369250
Alignment:
Q  136 tttaggtagtttaatttcct--tttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||| | |||||  ||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  7369165 tttaggtagttttaattcctcttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 7369250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 34194381 - 34194496
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  34194381 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 34194479  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  34194480 aacggacaatggactct 34194496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 215
Target Start/End: Complemental strand, 34196337 - 34196224
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  34196337 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 34196239  T
Q  201 aaaggacactggact 215  Q
    || ||||| ||||||    
T  34196238 aacggacaatggact 34196224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 35971861 - 35971913
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  35971861 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 35971913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 35993273 - 35993325
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| ||||||||||||| |||||||||||||||||||||    
T  35993273 taattttaggtagattagtttccttttaattccttgcaagaccatagcatgta 35993325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 16036716 - 16036777
Alignment:
Q  155 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  16036716 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 16036777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 155 - 217
Target Start/End: Original strand, 16051443 - 16051504
Alignment:
Q  155 ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  16051443 ttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 16051504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 14930093 - 14930041
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| |||||||||||||  ||||||||||||||||||||    
T  14930093 taattttaggtagattagtttccttttaattctttgcaagaccatagcatgta 14930041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18623053 - 18623105
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| |||||| |||||| |||||||||||||||||||||    
T  18623053 taattttaggtagattagtttcctcttaattccttgcaagaccatagcatgta 18623105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 159 - 220
Target Start/End: Original strand, 15854060 - 15854120
Alignment:
Q  159 aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||||||| |||||||||||||| || ||||| ||||| || ||||||||    
T  15854060 aatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatgaactctcta 15854120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Complemental strand, 10839544 - 10839496
Alignment:
Q  145 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactaggg 192  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  10839544 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactaggg 10839496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 18459807 - 18459755
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| |||| || ||||||||| || ||||||||||||||||||    
T  18459807 taattttaggtagattaactttcttttaattactcgcaagaccatagcatgta 18459755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 15353539 - 15353486
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  15353539 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 15353486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 5168828 - 5168923
Alignment:
Q  134 attttaggtagtttaatttcc-ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    ||||||| ||||||| ||||| ||||||||| | |||||||||||| ||||| |||||| |||| ||||| ||||  |||||| ||| |||| ||||    
T  5168828 attttagatagtttagtttccattttaattt-tcgcaagaccatagaatgtatactaggacaaaatgtaacggactatggactatctctaataatgt 5168923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18626909 - 18626961
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||  ||| | ||||||||||| ||||||||||| |||||||||    
T  18626909 taattttaggtaaattagtctccttttaattccttgcaagaccgtagcatgta 18626961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0954 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 134 - 229
Target Start/End: Original strand, 2706 - 2801
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctctataatgatgt 229  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||||||| ||||||    
T  2706 attttaggtagtttaagtttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctctatagtgatgt 2801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 109 - 220
Target Start/End: Complemental strand, 1706 - 1593
Alignment:
Q  109 aatttctatgtcaaatggacatgtaattttaggtagtttaatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaagg 205  Q
    ||||||||||| |||  | |||||||||||||||||||||||||||   |||||||||||||||||||||||| |||||||||||||| || ||||| ||    
T  1706 aatttctatgttaaaatggcatgtaattttaggtagtttaatttcccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacgg 1608  T
Q  206 acactggactctcta 220  Q
    ||| |||||||||||    
T  1607 acaatggactctcta 1593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089 (Bit Score: 58; Significance: 2e-24; HSPs: 2)
Name: scaffold0089
Description:

Target: scaffold0089; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 132 - 217
Target Start/End: Original strand, 25164 - 25249
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| ||||||||    
T  25164 taattttaggtagattagctttcttttaattacttgcaaaaccatagcatgtaaactagggcaaagtgtaaaggacaatggactct 25249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0089; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 51884 - 51831
Alignment:
Q  132 taattttaggtagtttaatttcctttt-aatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| || |||||| |||| |||||||||||||||||||||    
T  51884 taattttaggtagattagttccctttttaattccttgcaagaccatagcatgta 51831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0092 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0092
Description:

Target: scaffold0092; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 17340 - 17426
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  17340 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 17426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 54; Significance: 4e-22; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 26541 - 26456
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || ||||||||| || |||||||||||| ||||||||||||||||||||||||||||| ||||||||    
T  26541 taattttaggtagattagctttcttttaattactcgcaagaccatagtatgtaaactagggcaaagtgtaaaggacaatggactct 26456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 22550 - 22636
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  22550 attttaggtagtttaaatttccttttaacttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 22636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 220
Target Start/End: Complemental strand, 50294 - 50208
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||||| ||||||||||| ||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||||||    
T  50294 attttaggtagtttaaatttccttttaacttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactctcta 50208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0055 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0055
Description:

Target: scaffold0055; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 216
Target Start/End: Complemental strand, 7606 - 7524
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 216  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||    
T  7606 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactc 7524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0052 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0052
Description:

Target: scaffold0052; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 134 - 216
Target Start/End: Original strand, 76929 - 77011
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactc 216  Q
    |||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||| || ||||| ||||| |||||||    
T  76929 attttaggtagtttaaatttccttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactc 77011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0322 (Bit Score: 49; Significance: 4e-19; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 128 - 217
Target Start/End: Original strand, 17398 - 17490
Alignment:
Q  128 catgtaattttaggtagtttaatttcc----ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||| |||||||||||||||||    |||||||||||||||||||||||| |||||||||||||| || ||||| ||||| ||||||||    
T  17398 catgtaattctaggtagtttaatttccccttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaacggacaatggactct 17490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0260 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0260
Description:

Target: scaffold0260; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 134 - 217
Target Start/End: Complemental strand, 5841 - 5756
Alignment:
Q  134 attttaggtagtttaa--tttcctttt-aatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactct 217  Q
    ||||||||||||||||  ||||||||| |||||||||||||||||||| |||||||||||||| || ||||||||||| ||||||||    
T  5841 attttaggtagtttaaaatttcctttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgtaaaggacaatggactct 5756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 47; Significance: 6e-18; HSPs: 2)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 99092 - 99180
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  99092 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 99180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 220
Target Start/End: Original strand, 180015 - 180103
Alignment:
Q  134 attttaggtagttt-aatttcc--ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctcta 220  Q
    |||||||||||||| ||||||   |||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||||||    
T  180015 attttaggtagtttcaatttctctttttaatttcttgcaagaccatagaatgtaaactagggcaaa-tgtaacggacaatggactctcta 180103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 132 - 184
Target Start/End: Original strand, 18178 - 18230
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| |||||||||||||||||||||||||||||||||||    
T  18178 taattttaggtagattagtttccttttaatttcttgcaagaccatagcatgta 18230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0206 (Bit Score: 44; Significance: 4e-16; HSPs: 1)
Name: scaffold0206
Description:

Target: scaffold0206; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 134 - 192
Target Start/End: Original strand, 12445 - 12504
Alignment:
Q  134 attttaggtagtttaa-tttccttttaatttcttgcaagaccatagcatgtaaactaggg 192  Q
    |||||||||||||||| |||||||||| |||||||||||||||||| |||||||||||||    
T  12445 attttaggtagtttaaatttccttttattttcttgcaagaccatagaatgtaaactaggg 12504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0393 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0393
Description:

Target: scaffold0393; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 106 - 217
Target Start/End: Original strand, 6962 - 7077
Alignment:
Q  106 ttcaatttctatgtcaaa-tggacatgtaattttaggtagttt-aatttcc---ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgt 200  Q
    |||||||||||||| ||| | | ||||||| |||||||||||| ||||||    |||||||||||||||||||||||| |||||||||||||| || |||    
T  6962 ttcaatttctatgttaaagttggcatgtaaatttaggtagtttcaatttctcttttttaatttcttgcaagaccatagaatgtaaactagggccaa-tgt 7060  T
Q  201 aaaggacactggactct 217  Q
    || ||||| ||||||||    
T  7061 aacggacaatggactct 7077  T

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Target: scaffold0099 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 132 - 217
Target Start/End: Complemental strand, 282 - 194
Alignment:
Q  132 taattttaggtagtttaatttccttttaattt-cttgcaagaccatagcat-gtaaactaggg-caaagtgtaaaggacactggactct 217  Q
    ||||||||||||| |||  || |||||||||| || ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||    
T  282 taattttaggtagattagctttcttttaatttactcgcaagaccatagcattgtaaactagggtcaaagtgtaaaggacaatggactct 194  T

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Target: scaffold1704 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold1704
Description:

Target: scaffold1704; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 132 - 184
Target Start/End: Complemental strand, 777 - 725
Alignment:
Q  132 taattttaggtagtttaatttccttttaatttcttgcaagaccatagcatgta 184  Q
    ||||||||||||| ||| | ||||||||||| |||||||||||||||||||||    
T  777 taattttaggtagattagtctccttttaattccttgcaagaccatagcatgta 725  T

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Target: scaffold0134 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0134
Description:

Target: scaffold0134; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 129 - 218
Target Start/End: Original strand, 23280 - 23375
Alignment:
Q  129 atgtaattttaggtagtttaatttcc-------ttttaatttcttgcaagaccatagcatgtaaactagggcaaagtgtaaaggacactggactctc 218  Q
    ||||||||||||||||||||||||||       ||||||||| | |||||||||||| |||||||||||||| ||  |||| ||||| |||||||||    
T  23280 atgtaattttaggtagtttaatttcctttttttttttaatttatcgcaagaccatagaatgtaaactagggccaa-cgtaacggacaatggactctc 23375  T

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Target: scaffold0031 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0031
Description:

Target: scaffold0031; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 145 - 193
Target Start/End: Original strand, 125932 - 125981
Alignment:
Q  145 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactagggc 193  Q
    ||||||||| ||||||| ||||||||||||||||| ||||||||||||||    
T  125932 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactagggc 125981  T

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Target: scaffold1665 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold1665
Description:

Target: scaffold1665; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 134 - 184
Target Start/End: Complemental strand, 221 - 169
Alignment:
Q  134 attttaggtagttt-aatttcc-ttttaatttcttgcaagaccatagcatgta 184  Q
    |||||||||||||| ||||||| ||||||||| ||||||||||||||||||||    
T  221 attttaggtagtttcaatttcccttttaattttttgcaagaccatagcatgta 169  T

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Target: scaffold0143 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0143
Description:

Target: scaffold0143; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 145 - 192
Target Start/End: Original strand, 22661 - 22709
Alignment:
Q  145 tttaatttc-cttttaatttcttgcaagaccatagcatgtaaactaggg 192  Q
    ||||||||| ||||||| ||||||||||||||||| |||||||||||||    
T  22661 tttaatttctcttttaaattcttgcaagaccatagaatgtaaactaggg 22709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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