View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF8505_low_40 (Length: 218)
Name: NF8505_low_40
Description: NF8505
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8505_low_40 |
 | |
|
Alignment Details
Target: chr7 (Bit Score: 176; Significance: 5e-95; HSPs: 7)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 5284497 - 5284310
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284497 |
catcatgtaccttttcacatatgggcgaagacccaagagtttggtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
5284398 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5284397 |
tgagtaatctttgactttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
5284310 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 176; E-Value: 5e-95
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 5289630 - 5289817
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289630 |
catcatataccttttcacatatggacgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
5289729 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5289730 |
tgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
5289817 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 5302685 - 5302498
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | |||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302685 |
catcatgtaccttttcacatatgggcgaagacccaagagtttggtgagttgataatcagcttcgggcatgtctacaccacttgtggtgcaaacgattaag |
5302586 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5302585 |
tgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
5302498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 168; E-Value: 3e-90
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 5310586 - 5310399
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310586 |
catcatataccttttcacatatggacgaaggcccaagagttttgtgagttgataatcagctccaggcatgtctacaccacttgtggtgcaaacgattaag |
5310487 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5310486 |
tgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
5310399 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 5315300 - 5315113
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||| ||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||| ||||||||||||||||||||||||||| |
|
|
| T |
5315300 |
catcatgtatcttttcacatatgggcgaagacctaatagtttggtgagttgataatctgctccaggcatgtcaacaccacttgtggtgcaaacgattaag |
5315201 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
5315200 |
tgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccacca |
5315113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 46706921 - 46707108
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||||||||| || ||||||||||||||| |
|
|
| T |
46706921 |
catcatataccttttcacatatgggcgaagaccgaagagttttgtgagttggtaatcagctccaggcatgtctacaccactagtagtgcaaacgattaag |
46707020 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
46707021 |
tgggtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacctctaccaccacca |
46707108 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 32530975 - 32531019
Alignment:
| Q |
52 |
aagagttttgtgagttgataatcggctccaggcatgtctacacca |
96 |
Q |
| |
|
|||||||| |||||||| |||||||| || ||||||||||||||| |
|
|
| T |
32530975 |
aagagtttagtgagttggtaatcggcacccggcatgtctacacca |
32531019 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 156; Significance: 5e-83; HSPs: 3)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 44128763 - 44128576
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
44128763 |
catcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaag |
44128664 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44128663 |
tgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccacca |
44128576 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 44132968 - 44132781
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
44132968 |
catcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaag |
44132869 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44132868 |
tgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccacca |
44132781 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 156; E-Value: 5e-83
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 44141390 - 44141203
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||| |
|
|
| T |
44141390 |
catcatataccttttcacatatgggcgaagacctaagagttttgtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacgatcaag |
44141291 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||||||||||||||||||||||| |
|
|
| T |
44141290 |
tgagtaatctttgactttggttgaccccattcttttatggccttcactgcagcctccttccctagtctaggtacctctaccaccacca |
44141203 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 152; Significance: 1e-80; HSPs: 7)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 1505166 - 1504979
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||||||||| |||||||||||||||||||| |||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1505166 |
catcatgtacctcttcacatatgggcgaagacctaagagtttggtgagttggtaatcagctccaggcatgtctacaccacttgtggtgcaaacaattaag |
1505067 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
1505066 |
tgagtaatctttgactttggctgaccccattcttttatagcttttacggcagcctcctttcctagtctaggtacctctaccaccacca |
1504979 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 148; E-Value: 3e-78
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 1492357 - 1492170
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||| ||||| |||||||| |||||||| |||||||| ||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
1492357 |
catcatgtatctttttacatatggacgaagacctaagagtttagtgagttgataatcggccccaggcatgtctacaccgcttgtggtgcaaacgattaag |
1492258 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||| |
|
|
| T |
1492257 |
tgagtaatctttgactttggttgaccccattcttttatagccttcactgcagcctccttccctagtctaggtacttctaccaccacca |
1492170 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 1478188 - 1478001
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| ||||| ||||||||||| |||||||| |||||||| |||||||| ||||| || ||||||||||||||||||||||||||||||| ||| ||| |
|
|
| T |
1478188 |
catcatatacctcttcacatatggacgaagacctaagagtttggtgagttggtaatcagcgccaggcatgtctacaccacttgtggtgcaaaagatcaag |
1478089 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
|
|
| T |
1478088 |
tgtgtaatctttgattttggttggccccattcttttatagctttcactgcagcctcctttcctagtctaggtacttctaccaccacca |
1478001 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 1482382 - 1482195
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||| || ||||||||||| |||||||| ||||||||||||||||| |||||||| |||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
1482382 |
catcatgtatctcttcacatatggacgaagacctaagagttttgtgagttggtaatcggcaccaggcatgtctacaccacttgtggtacaaaatattaag |
1482283 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| ||||||||||| |||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||| |
|
|
| T |
1482282 |
tgtgtaatctttgattttggttggccccattcttttatagccttcactgcagcctcctttcctagtctaggcacctctaccaccacca |
1482195 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 97; E-Value: 8e-48
Query Start/End: Original strand, 18 - 198
Target Start/End: Complemental strand, 1499429 - 1499249
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||||||||||||||||||| |||||| ||||||||||| ||||| ||||| || |||||||||||||||||||| |||||||| ||||| |
|
|
| T |
1499429 |
catcatgtaccttttcacatatgggttaagacctaagagttttgttagttggtaatccgcaccaggcatgtctacaccactataggtgcaaaaaattaaa |
1499330 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctacc |
198 |
Q |
| |
|
|| ||||| |||||||| |||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| ||||||| |
|
|
| T |
1499329 |
tgtgtaatatttgacttcggttgaccccattcttcgatagccttcactgcagcctccttccctagtctaggtatctctacc |
1499249 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 18 - 205
Target Start/End: Complemental strand, 1509313 - 1509126
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||||||||| ||||||||| ||||||| || ||||| || |||||||||| ||||||| ||| || ||||||||||||||||||| |||||| |
|
|
| T |
1509313 |
catcatgtacctttttacatatgggtgaagacctaaaagtttggtaagttgataatgagctccagacatatcaacaccacttgtggtgcaaaagattaaa |
1509214 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| ||||||||||| ||||| || ||||||||||||||||| ||||||||| |||| |||||||| |||||||||| ||| ||||||| |
|
|
| T |
1509213 |
tgtgtaatctttgattttggctggccccattcttttatagccttcactgcaacctcttttcctagcctaggtacctttacaaccacca |
1509126 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 19 - 205
Target Start/End: Complemental strand, 1486858 - 1486672
Alignment:
| Q |
19 |
atcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagt |
118 |
Q |
| |
|
||||| |||| |||||||| |||| |||||| ||||||||||||||||| |||||||| ||||||||| ||| |||||| ||||||||| ||||||| |
|
|
| T |
1486858 |
atcatataccgtttcacatccgggcaaagacctaagagttttgtgagttggtaatcggcaccaggcatgcctataccactcatggtgcaaaatattaagt |
1486759 |
T |
|
| Q |
119 |
gagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
| |||||||||||||||||||| ||| |||||||||||||||||||||||||||| |||||||| ||||| || ||| |||||||| |
|
|
| T |
1486758 |
gtgtaatctttgactttggttggccctattcttttatagctttcactgcagcctcatttcctagcctaggcacgtctcgcaccacca |
1486672 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 108; Significance: 2e-54; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 24163723 - 24163910
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
|||||| |||||||| ||| ||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||||||| | ||||||| |||||| |
|
|
| T |
24163723 |
catcatatacctttttacacatgggcgaagacctaagagttttgtgagttggtaatcggcaccaggcatatctacaccacttatagtgcaaaatattaag |
24163822 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| || ||||||||||||||||| ||||||||||||||||| ||||| || ||||||||||||||||| ||| ||||||| ||||||| |
|
|
| T |
24163823 |
tgtgtgatctttgactttggttggccccattcttttatagccttcacggctgcctcctttcctagtcttggtgcctctactaccacca |
24163910 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 72; Significance: 6e-33; HSPs: 3)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 31 - 182
Target Start/End: Original strand, 37863336 - 37863487
Alignment:
| Q |
31 |
ttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttg |
130 |
Q |
| |
|
|||||||| ||||||||||||||||| |||||||| ||||| || || |||||||| || ||||||||||||||||||| |||| ||||||||||||| |
|
|
| T |
37863336 |
ttcacatacgggcgaagacccaagagctttgtgagctgatagtcagcaccaggcatatccacaccacttgtggtgcaaaaaattagatgagtaatctttg |
37863435 |
T |
|
| Q |
131 |
actttggttgaccccattcttttatagctttcactgcagcctcctttcctag |
182 |
Q |
| |
|
|||| |||||||||||||| || ||||| || ||||||||| |||||||| |
|
|
| T |
37863436 |
acttaggttgaccccattccttgatagcctttgttgcagcctcttttcctag |
37863487 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 18 - 205
Target Start/End: Original strand, 37859297 - 37859484
Alignment:
| Q |
18 |
catcatgtaccttttcacatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaag |
117 |
Q |
| |
|
||||||||| | ||||||||||| ||||| |||||||| ||||| || ||||| ||||| || |||||||| || ||||| |||||||||| ||| | | |
|
|
| T |
37859297 |
catcatgtaacgcttcacatatggacgaaggcccaagagctttgtcagctgatagtcggcaccgggcatgtccacgccactggtggtgcaaaagatgagg |
37859396 |
T |
|
| Q |
118 |
tgagtaatctttgactttggttgaccccattcttttatagctttcactgcagcctcctttcctagtctaggtacctctaccaccacca |
205 |
Q |
| |
|
|| |||||||| ||||| |||||||||||||| || || || || ||| ||||| ||||||||||| |||||||| || ||||||| |
|
|
| T |
37859397 |
tgggtaatcttggacttaggttgaccccattccttgatggcctttgttgctgcctcttttcctagtcttggtacctccacaaccacca |
37859484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 39030244 - 39030120
Alignment:
| Q |
34 |
acatatgggcgaagacccaagagttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgact |
133 |
Q |
| |
|
|||||||| | ||| || ||||| |||||||| ||||| || ||||||||||| || |||||||||| ||||||| || | ||||||| | |||||| |
|
|
| T |
39030244 |
acatatggacaaaggcctaagagctttgtgagctgatagtcagctccaggcatatcgacaccacttgaagtgcaaaatatgagatgagtaaccattgact |
39030145 |
T |
|
| Q |
134 |
ttggttgaccccattcttttatagc |
158 |
Q |
| |
|
| |||||||||||||| || ||||| |
|
|
| T |
39030144 |
taggttgaccccattcattgatagc |
39030120 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 57 - 149
Target Start/End: Complemental strand, 35250961 - 35250869
Alignment:
| Q |
57 |
ttttgtgagttgataatcggctccaggcatgtctacaccacttgtggtgcaaacgattaagtgagtaatctttgactttggttgaccccattc |
149 |
Q |
| |
|
||||||||| |||||||| || |||||||| || |||||||| || |||||| || | |||||| ||||| |||||||||||||||||||| |
|
|
| T |
35250961 |
ttttgtgagctgataatcagcaccaggcatatccacaccactagtaatgcaaaatatgaggtgagtgatcttggactttggttgaccccattc |
35250869 |
T |
|
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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