View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8506_high_8 (Length: 328)
Name: NF8506_high_8
Description: NF8506
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8506_high_8 |
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Alignment Details
Target: chr8 (Bit Score: 282; Significance: 1e-158; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 282; E-Value: 1e-158
Query Start/End: Original strand, 16 - 313
Target Start/End: Complemental strand, 37494076 - 37493779
Alignment:
| Q |
16 |
acatcactaaaagtattataacaagttaaggatgtggttatactgttactaaagtatgaacaattttattgatttgtcatggactaaattcaatacaaga |
115 |
Q |
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| T |
37494076 |
acatcactaaaagtattataacaagttaaggatgtggttatactgttactaaagtatgaacaattttattgatttgccatggactaaattcaatacaaga |
37493977 |
T |
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| Q |
116 |
gttttcaaaatataaattacaacaacgcttaaattcacacagtacataatcaaaatcagtaatgtcattgcttccatttgttaaaatagtcaatcatctt |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37493976 |
gttttcaaaatataaattacaacaacgcttaaattcacacagtacaaaatcaaaatcagtaatgtcattgcttccatttgttaaaatagtcaatcatctt |
37493877 |
T |
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| Q |
216 |
tttcaaatcaaaaacaaaattaacaacgcggtcatcgtaagtcatgaatccatgagagtgcatgaagtaggctcagagctttcctcacatccacattg |
313 |
Q |
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||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
37493876 |
tttcaaatcaaaaacaaaattaacaacgctgtcatcgtaagtcatgaatccatgagagtgcatgaagtaggctcagagcttccctcacatccacattg |
37493779 |
T |
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