View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF8508_high_33 (Length: 270)
Name: NF8508_high_33
Description: NF8508
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF8508_high_33 |
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Alignment Details
Target: chr2 (Bit Score: 234; Significance: 1e-129; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 234; E-Value: 1e-129
Query Start/End: Original strand, 11 - 256
Target Start/End: Original strand, 37717952 - 37718197
Alignment:
| Q |
11 |
atcatcatccataagcactaggtttccagaatccaagagcttcactaccctggttcttgatgaggacgcttctaagtttgtggaccagtaactttgtgat |
110 |
Q |
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| T |
37717952 |
atcatcatccataagcactaggtttccagaatccaagagcttcactaccctttttcttgacgaggacgcttctaagtttgtggaccagtaactttgtgat |
37718051 |
T |
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| Q |
111 |
gcatctgctactaccatatttccatcctttgcgatttgaaaaactcctttagaatctacaatagggttgtttctgttggctacccaaaccactgtttgtg |
210 |
Q |
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| T |
37718052 |
gcatctgctactaccatatttccatcctttgcgatttgaaaaactcctttagaatctacaatagggttgtttctgttggctacccaaaccactgtttgtg |
37718151 |
T |
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| Q |
211 |
gttccagatcgtgataccatattcccaagtattttttaagattctc |
256 |
Q |
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| T |
37718152 |
gttccagatcgtgataccatattcccaagtattttttaagattctc |
37718197 |
T |
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